Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06775.t1 | KEH35544.1 | 96.2 | 209 | 8 | 0 | 7 | 215 | 21 | 229 | 6.20E-105 | 390.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06775.t1 | Q8VZW3 | 62.2 | 209 | 78 | 1 | 7 | 214 | 1 | 209 | 2.2e-66 | 253.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06775.t1 | A0A072V0J3 | 96.2 | 209 | 8 | 0 | 7 | 215 | 21 | 229 | 4.5e-105 | 390.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049402 | MS.gene06775 | 0.847093 | 1.44E-59 | -1.69E-46 |
| MS.gene052494 | MS.gene06775 | 0.80057 | 1.35E-48 | -1.69E-46 |
| MS.gene055124 | MS.gene06775 | 0.810599 | 1.06E-50 | -1.69E-46 |
| MS.gene058171 | MS.gene06775 | 0.820668 | 6.07E-53 | -1.69E-46 |
| MS.gene058173 | MS.gene06775 | 0.820496 | 6.65E-53 | -1.69E-46 |
| MS.gene058175 | MS.gene06775 | 0.824314 | 8.63E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06775.t1 | MTR_3g093980 | 96.172 | 209 | 8 | 0 | 7 | 215 | 21 | 229 | 1.24e-134 | 377 |
| MS.gene06775.t1 | MTR_3g093980 | 96.610 | 177 | 6 | 0 | 39 | 215 | 1 | 177 | 6.29e-125 | 350 |
| MS.gene06775.t1 | MTR_3g093980 | 95.541 | 157 | 7 | 0 | 7 | 163 | 1 | 157 | 1.49e-97 | 280 |
| MS.gene06775.t1 | MTR_1g115820 | 32.075 | 212 | 132 | 5 | 12 | 215 | 8 | 215 | 8.65e-21 | 87.0 |
| MS.gene06775.t1 | MTR_1g115820 | 35.220 | 159 | 96 | 3 | 12 | 166 | 8 | 163 | 1.04e-19 | 82.8 |
| MS.gene06775.t1 | MTR_1g115850 | 28.019 | 207 | 139 | 4 | 12 | 211 | 11 | 214 | 9.08e-19 | 81.6 |
| MS.gene06775.t1 | MTR_1g115840 | 27.751 | 209 | 141 | 4 | 12 | 213 | 11 | 216 | 1.74e-18 | 80.9 |
| MS.gene06775.t1 | MTR_1g115890 | 27.404 | 208 | 143 | 5 | 11 | 211 | 8 | 214 | 1.55e-17 | 78.2 |
| MS.gene06775.t1 | MTR_1g115870 | 28.972 | 214 | 143 | 6 | 6 | 211 | 2 | 214 | 5.32e-17 | 76.6 |
| MS.gene06775.t1 | MTR_1g115850 | 27.103 | 214 | 139 | 5 | 12 | 211 | 11 | 221 | 3.58e-16 | 74.7 |
| MS.gene06775.t1 | MTR_2g072510 | 27.500 | 200 | 134 | 6 | 16 | 213 | 86 | 276 | 2.47e-15 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06775.t1 | AT5G05270 | 62.201 | 209 | 78 | 1 | 7 | 214 | 1 | 209 | 8.16e-83 | 245 |
| MS.gene06775.t1 | AT5G05270 | 62.201 | 209 | 78 | 1 | 7 | 214 | 1 | 209 | 8.16e-83 | 245 |
| MS.gene06775.t1 | AT3G55120 | 30.374 | 214 | 129 | 8 | 14 | 215 | 21 | 226 | 1.60e-16 | 75.9 |
| MS.gene06775.t1 | AT1G53520 | 26.882 | 186 | 130 | 4 | 29 | 213 | 106 | 286 | 2.23e-16 | 76.3 |
| MS.gene06775.t1 | AT5G66230 | 29.864 | 221 | 128 | 9 | 7 | 215 | 3 | 208 | 1.11e-14 | 72.4 |
| MS.gene06775.t1 | AT5G66220 | 29.032 | 155 | 102 | 3 | 65 | 215 | 9 | 159 | 2.57e-13 | 65.9 |
Find 59 sgRNAs with CRISPR-Local
Find 90 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATTCAATTGGGGTTTATT+TGG | 0.127513 | 3.3:+78229335 | MS.gene06775:CDS |
| AGAATTTCACTTGGAGAAAA+TGG | 0.134571 | 3.3:-78229314 | None:intergenic |
| TTCTTTGACGCTCTCATTTC+TGG | 0.168815 | 3.3:+78229429 | MS.gene06775:CDS |
| TGTTGTGATTAAAGAGATTA+AGG | 0.213746 | 3.3:+78229678 | MS.gene06775:CDS |
| TCCTTCAACCATTACATCTT+TGG | 0.255062 | 3.3:+78230347 | MS.gene06775:CDS |
| CAAGTGAAATTCTATTCAAT+TGG | 0.286514 | 3.3:+78229324 | MS.gene06775:CDS |
| AATACAGATTGTGGTATCTT+TGG | 0.300414 | 3.3:+78230233 | MS.gene06775:intron |
| TGCAAGTGGCTTGCTACTTC+AGG | 0.308776 | 3.3:-78229360 | None:intergenic |
| AAGTGAAATTCTATTCAATT+GGG | 0.340514 | 3.3:+78229325 | MS.gene06775:CDS |
| AGTGGCTAGTGAAACTGTTT+TGG | 0.373529 | 3.3:+78228947 | MS.gene06775:intron |
| GAGATTAAGGGTGCACAATA+TGG | 0.383753 | 3.3:+78229691 | MS.gene06775:CDS |
| GGATGAAGAAGAAGAAGCTT+TGG | 0.390087 | 3.3:+78229768 | MS.gene06775:CDS |
| TTGTCTTCCAACTCCTTGGC+AGG | 0.403272 | 3.3:-78229399 | None:intergenic |
| ATTAAGAAATGGTATCTTGC+TGG | 0.410454 | 3.3:+78230309 | MS.gene06775:CDS |
| ACCAAGGAGAGAAAGGGTTT+TGG | 0.417350 | 3.3:-78229006 | None:intergenic |
| TCAGCAGTTGGAGAGTTTGC+TGG | 0.419031 | 3.3:-78229856 | None:intergenic |
| GACCGCTGTGAGGGACCGTT+TGG | 0.422176 | 3.3:+78229726 | MS.gene06775:CDS |
| ACCAAAACCCTTTCTCTCCT+TGG | 0.424712 | 3.3:+78229005 | MS.gene06775:CDS |
| TTGGTAGTAGTGATCTTTGA+AGG | 0.439710 | 3.3:-78228987 | None:intergenic |
| GTTGTGATTAAAGAGATTAA+GGG | 0.453545 | 3.3:+78229679 | MS.gene06775:CDS |
| TTCATCCTCATATTTGTCAT+CGG | 0.460901 | 3.3:-78229752 | None:intergenic |
| ATCATTGTCTTCCAACTCCT+TGG | 0.461782 | 3.3:-78229403 | None:intergenic |
| TAGTAGAGACTATTAAGAAA+TGG | 0.472191 | 3.3:+78230298 | MS.gene06775:CDS |
| GTTTCTTGAAGTACTTAGAC+TGG | 0.476418 | 3.3:-78229810 | None:intergenic |
| TACCATGACCAAGGAGAGAA+AGG | 0.488761 | 3.3:-78229013 | None:intergenic |
| TCAAAGTATGTAATAGAGAA+TGG | 0.503420 | 3.3:+78230270 | MS.gene06775:CDS |
| GCCAAAGATGTAATGGTTGA+AGG | 0.506201 | 3.3:-78230348 | None:intergenic |
| CAGCAGTTGGAGAGTTTGCT+GGG | 0.511362 | 3.3:-78229855 | None:intergenic |
| TGGATAATTCCTCTGAGAGA+TGG | 0.511898 | 3.3:-78230374 | None:intergenic |
| CAATTGAATAGAATTTCACT+TGG | 0.511986 | 3.3:-78229323 | None:intergenic |
| AGCTACTTTACCTCAGCAGT+TGG | 0.518480 | 3.3:-78229868 | None:intergenic |
| AGTCTAATTGCCTTCTCCAC+AGG | 0.518956 | 3.3:-78229655 | None:intergenic |
| CAGATTGTGGTATCTTTGGA+AGG | 0.521938 | 3.3:+78230237 | MS.gene06775:intron |
| TACCTTTCCACTGTTGCAAG+TGG | 0.522349 | 3.3:-78229374 | None:intergenic |
| ATGTGCAGCTCCTGTGGAGA+AGG | 0.525875 | 3.3:+78229645 | MS.gene06775:intron |
| ATGGGTAGCCAAAGATGTAA+TGG | 0.528630 | 3.3:-78230355 | None:intergenic |
| GGATAATTCCTCTGAGAGAT+GGG | 0.538139 | 3.3:-78230373 | None:intergenic |
| ACCATGACCAAGGAGAGAAA+GGG | 0.540135 | 3.3:-78229012 | None:intergenic |
| ACCCTTTCTCTCCTTGGTCA+TGG | 0.540415 | 3.3:+78229011 | MS.gene06775:CDS |
| GTGAATATGTGCAGCTCCTG+TGG | 0.541590 | 3.3:+78229639 | MS.gene06775:intron |
| AATGGTATCTTGCTGGCTCA+AGG | 0.546466 | 3.3:+78230316 | MS.gene06775:CDS |
| ATTTGTCATCGGCTGCCAAA+CGG | 0.557673 | 3.3:-78229741 | None:intergenic |
| AGTGAAATTCTATTCAATTG+GGG | 0.558547 | 3.3:+78229326 | MS.gene06775:CDS |
| TGGTAGTAGTGATCTTTGAA+GGG | 0.566326 | 3.3:-78228986 | None:intergenic |
| ATGGTATCTTGCTGGCTCAA+GGG | 0.567607 | 3.3:+78230317 | MS.gene06775:CDS |
| AGGTAAGCCTGCCAAGGAGT+TGG | 0.569479 | 3.3:+78229392 | MS.gene06775:CDS |
| TAGCAAGCCACTTGCAACAG+TGG | 0.573061 | 3.3:+78229367 | MS.gene06775:CDS |
| GGCAGCCGATGACAAATATG+AGG | 0.581635 | 3.3:+78229747 | MS.gene06775:CDS |
| TTTGATAGGGATTACCGACA+TGG | 0.591441 | 3.3:+78229287 | MS.gene06775:intron |
| AGCCACTTGCAACAGTGGAA+AGG | 0.600159 | 3.3:+78229372 | MS.gene06775:CDS |
| AGATTGTGGTATCTTTGGAA+GGG | 0.601655 | 3.3:+78230238 | MS.gene06775:intron |
| GTGGAAAGGTAAGCCTGCCA+AGG | 0.623835 | 3.3:+78229386 | MS.gene06775:CDS |
| GAGAAAATGGATCTCCATGT+CGG | 0.629435 | 3.3:-78229301 | None:intergenic |
| TCAGATTGAGACCGCTGTGA+GGG | 0.629678 | 3.3:+78229717 | MS.gene06775:CDS |
| AGCAAACTCTCCAACTGCTG+AGG | 0.645259 | 3.3:+78229858 | MS.gene06775:CDS |
| TGCCAAACGGTCCCTCACAG+CGG | 0.689378 | 3.3:-78229728 | None:intergenic |
| TTTGGCTACCCATCTCTCAG+AGG | 0.689828 | 3.3:+78230365 | MS.gene06775:CDS |
| TTCAGATTGAGACCGCTGTG+AGG | 0.696200 | 3.3:+78229716 | MS.gene06775:CDS |
| GTAGCAACTTACCATGACCA+AGG | 0.712424 | 3.3:-78229022 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAATAAATTGAGGA+AGG | + | chr3.3:78230025-78230044 | MS.gene06775:intron | 15.0% |
| !! | CAACATTTATGATATAATTA+AGG | - | chr3.3:78229585-78229604 | None:intergenic | 15.0% |
| !! | TTTAAAGAAAAAGTTTAAGT+TGG | - | chr3.3:78230007-78230026 | None:intergenic | 15.0% |
| !!! | AATTAGTTTAAGTTGATTTT+AGG | + | chr3.3:78229938-78229957 | MS.gene06775:intron | 15.0% |
| !! | AAAGAAGTTGGATTATAAAA+GGG | - | chr3.3:78229466-78229485 | None:intergenic | 20.0% |
| !! | AAGTGAAATTCTATTCAATT+GGG | + | chr3.3:78229325-78229344 | MS.gene06775:CDS | 20.0% |
| !! | TCAAATCAAGAAAAAGAATT+TGG | - | chr3.3:78229076-78229095 | None:intergenic | 20.0% |
| !! | TTGTTAATATTAGTTGAAGT+AGG | - | chr3.3:78230172-78230191 | None:intergenic | 20.0% |
| !!! | AAAAAGTTTAAGTTGGTTAT+AGG | - | chr3.3:78230000-78230019 | None:intergenic | 20.0% |
| !!! | AACTAATTCTAAGAATGAAT+AGG | - | chr3.3:78229926-78229945 | None:intergenic | 20.0% |
| !!! | CTTGATTTGATTTTGAATAT+GGG | + | chr3.3:78229086-78229105 | MS.gene06775:intron | 20.0% |
| !!! | TCTTGATTTGATTTTGAATA+TGG | + | chr3.3:78229085-78229104 | MS.gene06775:intron | 20.0% |
| !!! | TTGATTTGATTTTGAATATG+GGG | + | chr3.3:78229087-78229106 | MS.gene06775:intron | 20.0% |
| ! | AAGATATTATCGAAAGAAGT+TGG | - | chr3.3:78229478-78229497 | None:intergenic | 25.0% |
| ! | AGAATGAATAGGATCAATTA+AGG | - | chr3.3:78229915-78229934 | None:intergenic | 25.0% |
| ! | AGTGAAATTCTATTCAATTG+GGG | + | chr3.3:78229326-78229345 | MS.gene06775:CDS | 25.0% |
| ! | CAAGTGAAATTCTATTCAAT+TGG | + | chr3.3:78229324-78229343 | MS.gene06775:CDS | 25.0% |
| ! | CAATTGAATAGAATTTCACT+TGG | - | chr3.3:78229326-78229345 | None:intergenic | 25.0% |
| ! | GAAAGAAGTTGGATTATAAA+AGG | - | chr3.3:78229467-78229486 | None:intergenic | 25.0% |
| ! | GAATTTGGAAGAATTTCAAA+AGG | - | chr3.3:78229061-78229080 | None:intergenic | 25.0% |
| ! | GTTGTGATTAAAGAGATTAA+GGG | + | chr3.3:78229679-78229698 | MS.gene06775:CDS | 25.0% |
| ! | GTTTCAAAATCAAACTCTTA+CGG | + | chr3.3:78230123-78230142 | MS.gene06775:intron | 25.0% |
| ! | TAGTAGAGACTATTAAGAAA+TGG | + | chr3.3:78230298-78230317 | MS.gene06775:CDS | 25.0% |
| ! | TATGAGATTTGAATTTCATC+CGG | + | chr3.3:78230101-78230120 | MS.gene06775:intron | 25.0% |
| ! | TCAAAGTATGTAATAGAGAA+TGG | + | chr3.3:78230270-78230289 | MS.gene06775:CDS | 25.0% |
| ! | TGTTGTGATTAAAGAGATTA+AGG | + | chr3.3:78229678-78229697 | MS.gene06775:CDS | 25.0% |
| !! | GGAAAATCAAGTTATTGATT+TGG | - | chr3.3:78229264-78229283 | None:intergenic | 25.0% |
| !! | TTGATTTTCCTCTTTTGATA+GGG | + | chr3.3:78229274-78229293 | MS.gene06775:intron | 25.0% |
| !!! | TAAGAGTTTGATTTTGAAAC+CGG | - | chr3.3:78230123-78230142 | None:intergenic | 25.0% |
| AATACAGATTGTGGTATCTT+TGG | + | chr3.3:78230233-78230252 | MS.gene06775:intron | 30.0% | |
| AGAATTTCACTTGGAGAAAA+TGG | - | chr3.3:78229317-78229336 | None:intergenic | 30.0% | |
| ATTAAGAAATGGTATCTTGC+TGG | + | chr3.3:78230309-78230328 | MS.gene06775:CDS | 30.0% | |
| CTATTCAATTGGGGTTTATT+TGG | + | chr3.3:78229335-78229354 | MS.gene06775:CDS | 30.0% | |
| GAGCTCGTCTATTTATTATT+TGG | + | chr3.3:78229533-78229552 | MS.gene06775:intron | 30.0% | |
| GTTTGTGAATTTGATTACAG+TGG | + | chr3.3:78228929-78228948 | MS.gene06775:intron | 30.0% | |
| TTCATCCTCATATTTGTCAT+CGG | - | chr3.3:78229755-78229774 | None:intergenic | 30.0% | |
| ! | CTTGATTTTCCTCTTTTGAT+AGG | + | chr3.3:78229273-78229292 | MS.gene06775:intron | 30.0% |
| !! | AGTTGATTTTAGGTACAAGT+TGG | + | chr3.3:78229948-78229967 | MS.gene06775:intron | 30.0% |
| !! | GTTTGTTGTAATACAGATTG+TGG | + | chr3.3:78230224-78230243 | MS.gene06775:intron | 30.0% |
| CTAAAAGTAGCAAGAGATGT+AGG | + | chr3.3:78229204-78229223 | MS.gene06775:intron | 35.0% | |
| TCCTTCAACCATTACATCTT+TGG | + | chr3.3:78230347-78230366 | MS.gene06775:CDS | 35.0% | |
| TGGTAGTAGTGATCTTTGAA+GGG | - | chr3.3:78228989-78229008 | None:intergenic | 35.0% | |
| ! | AGATTGTGGTATCTTTGGAA+GGG | + | chr3.3:78230238-78230257 | MS.gene06775:intron | 35.0% |
| ! | GTTTCTTGAAGTACTTAGAC+TGG | - | chr3.3:78229813-78229832 | None:intergenic | 35.0% |
| ! | TTGGTAGTAGTGATCTTTGA+AGG | - | chr3.3:78228990-78229009 | None:intergenic | 35.0% |
| !!! | GATTTTAGGTACAAGTTGGT+TGG | + | chr3.3:78229952-78229971 | MS.gene06775:intron | 35.0% |
| ATCATTGTCTTCCAACTCCT+TGG | - | chr3.3:78229406-78229425 | None:intergenic | 40.0% | |
| ATGGGTAGCCAAAGATGTAA+TGG | - | chr3.3:78230358-78230377 | None:intergenic | 40.0% | |
| CAGATTGTGGTATCTTTGGA+AGG | + | chr3.3:78230237-78230256 | MS.gene06775:intron | 40.0% | |
| GAGAAAATGGATCTCCATGT+CGG | - | chr3.3:78229304-78229323 | None:intergenic | 40.0% | |
| GCCAAAGATGTAATGGTTGA+AGG | - | chr3.3:78230351-78230370 | None:intergenic | 40.0% | |
| GGATGAAGAAGAAGAAGCTT+TGG | + | chr3.3:78229768-78229787 | MS.gene06775:CDS | 40.0% | |
| GTAAAGTAGCTAGCAGCATT+AGG | + | chr3.3:78229880-78229899 | MS.gene06775:intron | 40.0% | |
| TCGGTAATCCCTATCAAAAG+AGG | - | chr3.3:78229285-78229304 | None:intergenic | 40.0% | |
| TTCTTTGACGCTCTCATTTC+TGG | + | chr3.3:78229429-78229448 | MS.gene06775:CDS | 40.0% | |
| TTTGATAGGGATTACCGACA+TGG | + | chr3.3:78229287-78229306 | MS.gene06775:intron | 40.0% | |
| ! | AGTGGCTAGTGAAACTGTTT+TGG | + | chr3.3:78228947-78228966 | MS.gene06775:intron | 40.0% |
| ! | GAGATTAAGGGTGCACAATA+TGG | + | chr3.3:78229691-78229710 | MS.gene06775:CDS | 40.0% |
| ! | GGATAATTCCTCTGAGAGAT+GGG | - | chr3.3:78230376-78230395 | None:intergenic | 40.0% |
| ! | TGGATAATTCCTCTGAGAGA+TGG | - | chr3.3:78230377-78230396 | None:intergenic | 40.0% |
| ACCAAAACCCTTTCTCTCCT+TGG | + | chr3.3:78229005-78229024 | MS.gene06775:CDS | 45.0% | |
| ACCATGACCAAGGAGAGAAA+GGG | - | chr3.3:78229015-78229034 | None:intergenic | 45.0% | |
| AGTCTAATTGCCTTCTCCAC+AGG | - | chr3.3:78229658-78229677 | None:intergenic | 45.0% | |
| GTAGCAACTTACCATGACCA+AGG | - | chr3.3:78229025-78229044 | None:intergenic | 45.0% | |
| TACCATGACCAAGGAGAGAA+AGG | - | chr3.3:78229016-78229035 | None:intergenic | 45.0% | |
| TACCTTTCCACTGTTGCAAG+TGG | - | chr3.3:78229377-78229396 | None:intergenic | 45.0% | |
| ! | ACCAAGGAGAGAAAGGGTTT+TGG | - | chr3.3:78229009-78229028 | None:intergenic | 45.0% |
| ! | AGCTACTTTACCTCAGCAGT+TGG | - | chr3.3:78229871-78229890 | None:intergenic | 45.0% |
| ! | ATTTGTCATCGGCTGCCAAA+CGG | - | chr3.3:78229744-78229763 | None:intergenic | 45.0% |
| !! | AATGGTATCTTGCTGGCTCA+AGG | + | chr3.3:78230316-78230335 | MS.gene06775:CDS | 45.0% |
| !! | ATGGTATCTTGCTGGCTCAA+GGG | + | chr3.3:78230317-78230336 | MS.gene06775:CDS | 45.0% |
| !! | TTTAAAAAATAAATAAATTG+AGG | + | chr3.3:78230021-78230040 | MS.gene06775:intron | 5.0% |
| ACCCTTTCTCTCCTTGGTCA+TGG | + | chr3.3:78229011-78229030 | MS.gene06775:CDS | 50.0% | |
| AGCAAACTCTCCAACTGCTG+AGG | + | chr3.3:78229858-78229877 | MS.gene06775:CDS | 50.0% | |
| AGCCACTTGCAACAGTGGAA+AGG | + | chr3.3:78229372-78229391 | MS.gene06775:CDS | 50.0% | |
| GGCAGCCGATGACAAATATG+AGG | + | chr3.3:78229747-78229766 | MS.gene06775:CDS | 50.0% | |
| GTGAATATGTGCAGCTCCTG+TGG | + | chr3.3:78229639-78229658 | MS.gene06775:intron | 50.0% | |
| TAGCAAGCCACTTGCAACAG+TGG | + | chr3.3:78229367-78229386 | MS.gene06775:CDS | 50.0% | |
| TCAGATTGAGACCGCTGTGA+GGG | + | chr3.3:78229717-78229736 | MS.gene06775:CDS | 50.0% | |
| TCAGCAGTTGGAGAGTTTGC+TGG | - | chr3.3:78229859-78229878 | None:intergenic | 50.0% | |
| TTCAGATTGAGACCGCTGTG+AGG | + | chr3.3:78229716-78229735 | MS.gene06775:CDS | 50.0% | |
| TTGTCTTCCAACTCCTTGGC+AGG | - | chr3.3:78229402-78229421 | None:intergenic | 50.0% | |
| TTTGGCTACCCATCTCTCAG+AGG | + | chr3.3:78230365-78230384 | MS.gene06775:CDS | 50.0% | |
| ! | CAGCAGTTGGAGAGTTTGCT+GGG | - | chr3.3:78229858-78229877 | None:intergenic | 50.0% |
| !! | TGCAAGTGGCTTGCTACTTC+AGG | - | chr3.3:78229363-78229382 | None:intergenic | 50.0% |
| AGGTAAGCCTGCCAAGGAGT+TGG | + | chr3.3:78229392-78229411 | MS.gene06775:CDS | 55.0% | |
| ATGTGCAGCTCCTGTGGAGA+AGG | + | chr3.3:78229645-78229664 | MS.gene06775:intron | 55.0% | |
| GTGGAAAGGTAAGCCTGCCA+AGG | + | chr3.3:78229386-78229405 | MS.gene06775:CDS | 55.0% | |
| TGCCAAACGGTCCCTCACAG+CGG | - | chr3.3:78229731-78229750 | None:intergenic | 60.0% | |
| GACCGCTGTGAGGGACCGTT+TGG | + | chr3.3:78229726-78229745 | MS.gene06775:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 78228866 | 78230401 | 78228866 | ID=MS.gene06775 |
| chr3.3 | mRNA | 78228866 | 78230401 | 78228866 | ID=MS.gene06775.t1;Parent=MS.gene06775 |
| chr3.3 | exon | 78228866 | 78228884 | 78228866 | ID=MS.gene06775.t1.exon1;Parent=MS.gene06775.t1 |
| chr3.3 | CDS | 78228866 | 78228884 | 78228866 | ID=cds.MS.gene06775.t1;Parent=MS.gene06775.t1 |
| chr3.3 | exon | 78228949 | 78229032 | 78228949 | ID=MS.gene06775.t1.exon2;Parent=MS.gene06775.t1 |
| chr3.3 | CDS | 78228949 | 78229032 | 78228949 | ID=cds.MS.gene06775.t1;Parent=MS.gene06775.t1 |
| chr3.3 | exon | 78229295 | 78229450 | 78229295 | ID=MS.gene06775.t1.exon3;Parent=MS.gene06775.t1 |
| chr3.3 | CDS | 78229295 | 78229450 | 78229295 | ID=cds.MS.gene06775.t1;Parent=MS.gene06775.t1 |
| chr3.3 | exon | 78229653 | 78229879 | 78229653 | ID=MS.gene06775.t1.exon4;Parent=MS.gene06775.t1 |
| chr3.3 | CDS | 78229653 | 78229879 | 78229653 | ID=cds.MS.gene06775.t1;Parent=MS.gene06775.t1 |
| chr3.3 | exon | 78230240 | 78230401 | 78230240 | ID=MS.gene06775.t1.exon5;Parent=MS.gene06775.t1 |
| chr3.3 | CDS | 78230240 | 78230401 | 78230240 | ID=cds.MS.gene06775.t1;Parent=MS.gene06775.t1 |
| Gene Sequence |
| Protein sequence |
