Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067789.t1 | XP_003624606.1 | 97.4 | 901 | 23 | 0 | 1 | 901 | 1 | 901 | 0.00E+00 | 1542.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067789.t1 | O75175 | 28.2 | 907 | 484 | 16 | 1 | 898 | 1 | 749 | 2.6e-60 | 235.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067789.t1 | A2Q5Q7 | 97.4 | 901 | 23 | 0 | 1 | 901 | 1 | 901 | 0.0e+00 | 1542.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050750 | MS.gene067789 | -0.801804 | 7.57E-49 | -1.69E-46 |
| MS.gene050953 | MS.gene067789 | -0.803817 | 2.91E-49 | -1.69E-46 |
| MS.gene051924 | MS.gene067789 | 0.802969 | 4.36E-49 | -1.69E-46 |
| MS.gene052358 | MS.gene067789 | 0.810598 | 1.06E-50 | -1.69E-46 |
| MS.gene052389 | MS.gene067789 | -0.81653 | 5.27E-52 | -1.69E-46 |
| MS.gene054291 | MS.gene067789 | 0.834585 | 2.75E-56 | -1.69E-46 |
| MS.gene060879 | MS.gene067789 | -0.834389 | 3.08E-56 | -1.69E-46 |
| MS.gene061040 | MS.gene067789 | 0.823331 | 1.47E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067789.t1 | MTR_7g085350 | 99.445 | 901 | 5 | 0 | 1 | 901 | 1 | 901 | 0.0 | 1843 |
| MS.gene067789.t1 | MTR_7g085350 | 96.013 | 903 | 7 | 2 | 1 | 901 | 1 | 876 | 0.0 | 1768 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067789.t1 | AT5G18230 | 60.176 | 909 | 287 | 23 | 1 | 901 | 1 | 842 | 0.0 | 986 |
| MS.gene067789.t1 | AT5G18230 | 60.044 | 911 | 287 | 24 | 1 | 901 | 1 | 844 | 0.0 | 980 |
| MS.gene067789.t1 | AT5G18230 | 59.780 | 910 | 312 | 23 | 1 | 901 | 1 | 865 | 0.0 | 979 |
| MS.gene067789.t1 | AT5G18230 | 58.910 | 881 | 286 | 24 | 29 | 901 | 3 | 815 | 0.0 | 926 |
Find 216 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGCTTCTGTCAACGTTTC+AGG | 0.139611 | 7.1:-19670754 | MS.gene067789:CDS |
| AATGAAGCTGCAGCTGTATC+TGG | 0.206468 | 7.1:-19670304 | MS.gene067789:CDS |
| TGTTTCTTCACAATCTAGTA+TGG | 0.208806 | 7.1:-19668368 | MS.gene067789:CDS |
| CTGAAAGTTTGAGCAGCTTC+TGG | 0.230886 | 7.1:+19666660 | None:intergenic |
| CCGGCTGCTGCCATCCTTCC+TGG | 0.244804 | 7.1:-19670712 | MS.gene067789:CDS |
| CTGCTGACCCAAGCCTTCTT+TGG | 0.270798 | 7.1:+19675080 | None:intergenic |
| GAACACATACCAACAATATT+TGG | 0.270937 | 7.1:-19666083 | MS.gene067789:CDS |
| CTTAATATGCCTTCCCTTGT+TGG | 0.278982 | 7.1:-19669015 | MS.gene067789:CDS |
| GCCAGCATCCCTCTTGGTTC+TGG | 0.283435 | 7.1:-19670529 | MS.gene067789:CDS |
| TTGAAGTCTTCGACAGTATC+TGG | 0.295569 | 7.1:-19676446 | MS.gene067789:CDS |
| TGATTCTGAAAGGGACTTCC+AGG | 0.312082 | 7.1:+19670238 | None:intergenic |
| AATAACTAAGCGAAACATAT+TGG | 0.318023 | 7.1:-19670455 | MS.gene067789:CDS |
| TAATGATGTGAAAGATTTCT+TGG | 0.325677 | 7.1:-19673223 | MS.gene067789:CDS |
| TAGTTAACAATCCTGCCTTT+TGG | 0.332335 | 7.1:-19666265 | MS.gene067789:CDS |
| TTCTCCCCTTCTGTGGTTCC+CGG | 0.338082 | 7.1:-19670274 | MS.gene067789:CDS |
| AAATTCTGTTCGAAATATCT+TGG | 0.339326 | 7.1:-19670686 | MS.gene067789:CDS |
| GCCTTCTTTGGAGAATGCTT+TGG | 0.342598 | 7.1:+19675092 | None:intergenic |
| CATACAGGAGTATAGGTTCT+AGG | 0.364465 | 7.1:+19666420 | None:intergenic |
| ATAATCATCTGTAGCAACTT+TGG | 0.365827 | 7.1:+19665985 | None:intergenic |
| GAAACCATGTATTATACTTT+CGG | 0.368436 | 7.1:+19666023 | None:intergenic |
| TCCGGTCAACATCCATTTGC+AGG | 0.370131 | 7.1:-19668268 | MS.gene067789:CDS |
| TTGTTAATCTCTTCTTCCTT+TGG | 0.377685 | 7.1:+19670634 | None:intergenic |
| GGTGCATCAAGTGTTAATTC+TGG | 0.379497 | 7.1:-19666525 | MS.gene067789:CDS |
| GAAGCTGATTGAACGGGAAA+TGG | 0.382466 | 7.1:-19675148 | MS.gene067789:CDS |
| GATTCAGTTGTTGACTCATC+AGG | 0.388141 | 7.1:+19667232 | None:intergenic |
| GGAAACACGGTTTCTAGTAT+TGG | 0.391890 | 7.1:-19670508 | MS.gene067789:CDS |
| TAATCATCTGTAGCAACTTT+GGG | 0.393983 | 7.1:+19665986 | None:intergenic |
| ACTGGAAACCTCGGCGTCAT+TGG | 0.399562 | 7.1:-19666591 | MS.gene067789:CDS |
| CCTTTGCAGCCAAATATTGT+TGG | 0.400487 | 7.1:+19666074 | None:intergenic |
| GTTGGGAAGAAAACTGCTTA+TGG | 0.406309 | 7.1:+19668986 | None:intergenic |
| ATAACTAAGCGAAACATATT+GGG | 0.406875 | 7.1:-19670454 | MS.gene067789:CDS |
| AGAGATATTGATTTGTCTCC+TGG | 0.409546 | 7.1:-19666639 | MS.gene067789:CDS |
| TTCACATCATTAACCTCCTC+TGG | 0.410010 | 7.1:+19673234 | None:intergenic |
| TAGCTAGAAGGTGTAATTGC+TGG | 0.410518 | 7.1:+19666308 | None:intergenic |
| AGGAGCTCAAGAAGCAGTCT+TGG | 0.418159 | 7.1:-19666054 | MS.gene067789:CDS |
| GTTCAAACACTCACAGTCTT+AGG | 0.420215 | 7.1:+19675057 | None:intergenic |
| TCTACTTCTAGCACAGGAAT+TGG | 0.421784 | 7.1:-19667211 | MS.gene067789:CDS |
| GGAGCCATTGGTGATAGCTT+TGG | 0.424339 | 7.1:-19666546 | MS.gene067789:CDS |
| TTTGCAACTGCAACGCTTGT+GGG | 0.425303 | 7.1:+19672408 | None:intergenic |
| AACTTTGAAGCTGAGCTTGA+AGG | 0.425698 | 7.1:-19673471 | MS.gene067789:CDS |
| CCAGGTCTCCATTGCATGCC+GGG | 0.425868 | 7.1:+19670256 | None:intergenic |
| ACCACCGAGACTCGGGGATT+GGG | 0.426339 | 7.1:+19668336 | None:intergenic |
| CAAAATGCATACAGGAGTAT+AGG | 0.427121 | 7.1:+19666413 | None:intergenic |
| CCCTCTTGGTTCTGGAAACA+CGG | 0.428039 | 7.1:-19670521 | MS.gene067789:CDS |
| AGCTGATGAGACAGCGTCTC+AGG | 0.428860 | 7.1:-19670869 | MS.gene067789:CDS |
| CGACTATGTAGAGCGTAATC+AGG | 0.430732 | 7.1:-19673199 | MS.gene067789:intron |
| AACTCTGTTCATTCCCCGTC+CGG | 0.430822 | 7.1:-19668286 | MS.gene067789:CDS |
| TACCACCGAGACTCGGGGAT+TGG | 0.430881 | 7.1:+19668335 | None:intergenic |
| AAGAAATACCACCGAGACTC+GGG | 0.431954 | 7.1:+19668329 | None:intergenic |
| CTTCTTATCCTTGATCTCAC+TGG | 0.438563 | 7.1:+19676202 | None:intergenic |
| AGATTAGGTCTTGAACCATT+TGG | 0.438605 | 7.1:-19666239 | MS.gene067789:CDS |
| CAACATACCATCCATGTTGC+AGG | 0.438907 | 7.1:+19665915 | None:intergenic |
| TCTTAGCTTGAAAACTCCTT+TGG | 0.441359 | 7.1:-19671657 | MS.gene067789:CDS |
| ATATCAATCTATTACTTAGC+GGG | 0.445862 | 7.1:+19670383 | None:intergenic |
| TTACAATCAAATCAATCTAC+TGG | 0.446878 | 7.1:-19666609 | MS.gene067789:CDS |
| TTTCAGTTCTTCCACGAAGC+TGG | 0.448724 | 7.1:+19669109 | None:intergenic |
| GATGGCAGCAGCCGGTGCAC+TGG | 0.450220 | 7.1:+19670720 | None:intergenic |
| AGCATTCTCCAAAGAAGGCT+TGG | 0.451221 | 7.1:-19675088 | MS.gene067789:CDS |
| GATTGATATTGCCTCAGGTT+GGG | 0.451513 | 7.1:-19670369 | MS.gene067789:CDS |
| GGCGTCATTGGAAGAAGAAA+TGG | 0.453295 | 7.1:-19666579 | MS.gene067789:CDS |
| TCCAGAACCAAGAGGGATGC+TGG | 0.453631 | 7.1:+19670528 | None:intergenic |
| GAGAGTACCTGCTGCAAAAG+TGG | 0.460977 | 7.1:+19668955 | None:intergenic |
| GTTTCTAGTATTGGAGCCCT+TGG | 0.469331 | 7.1:-19670499 | MS.gene067789:CDS |
| TGCTACAGATGATTATGAGC+AGG | 0.469714 | 7.1:-19665978 | MS.gene067789:CDS |
| TGCGCGGAAGCTGATTGAAC+GGG | 0.473346 | 7.1:-19675154 | MS.gene067789:CDS |
| CCTGAAACGTTGACAGAAGC+AGG | 0.482965 | 7.1:+19670754 | None:intergenic |
| GCAAAAGTGGACTTTGTTGT+TGG | 0.483393 | 7.1:+19668968 | None:intergenic |
| TGCATGCCGGGAACCACAGA+AGG | 0.483621 | 7.1:+19670268 | None:intergenic |
| CTGAAATAGCTCCTGATCAA+AGG | 0.484360 | 7.1:-19669092 | MS.gene067789:CDS |
| TCTGATTTAGCCTTCTCTCT+CGG | 0.484446 | 7.1:+19674158 | None:intergenic |
| GTAGATTGATTTGATTGTAA+AGG | 0.486657 | 7.1:+19666612 | None:intergenic |
| TCTTTAGCAACACCTGCAAA+TGG | 0.488366 | 7.1:+19668256 | None:intergenic |
| CAAAAGTGGACTTTGTTGTT+GGG | 0.488422 | 7.1:+19668969 | None:intergenic |
| CAAGGGAAGGCATATTAAGA+AGG | 0.488900 | 7.1:+19669019 | None:intergenic |
| TCTTAATTTGTCCAGTGCAC+CGG | 0.490067 | 7.1:-19670731 | MS.gene067789:CDS |
| CTTTGCAACTGCAACGCTTG+TGG | 0.490211 | 7.1:+19672407 | None:intergenic |
| TAATAGATTGATATTGCCTC+AGG | 0.493998 | 7.1:-19670374 | MS.gene067789:CDS |
| GATTCAATCCAGTGAGATCA+AGG | 0.495496 | 7.1:-19676210 | MS.gene067789:CDS |
| AATATGCCTTCCCTTGTTGG+AGG | 0.497573 | 7.1:-19669012 | MS.gene067789:CDS |
| TGTACTTGAGGATAGCTAGA+AGG | 0.499253 | 7.1:+19666296 | None:intergenic |
| ACCAAAGCATTCTCCAAAGA+AGG | 0.499749 | 7.1:-19675093 | MS.gene067789:CDS |
| GCAGGTGTTGCTAAAGATGC+AGG | 0.501408 | 7.1:-19668250 | MS.gene067789:intron |
| ACCTGCAAATGGATGTTGAC+CGG | 0.504548 | 7.1:+19668267 | None:intergenic |
| GCATCATTCTGATTCTGAAA+GGG | 0.504924 | 7.1:+19670229 | None:intergenic |
| AGAAGAAATGGTGTTGAACT+TGG | 0.506181 | 7.1:-19666567 | MS.gene067789:CDS |
| TGAAATAGCTCCTGATCAAA+GGG | 0.507979 | 7.1:-19669091 | MS.gene067789:CDS |
| GCATTCTCCAAAGAAGGCTT+GGG | 0.508519 | 7.1:-19675087 | MS.gene067789:CDS |
| ATGAAGCTGCAGCTGTATCT+GGG | 0.509918 | 7.1:-19670303 | MS.gene067789:CDS |
| CTAGGACGTTCTGAGTCTCT+AGG | 0.510941 | 7.1:+19666438 | None:intergenic |
| TCCAGGTCTCCATTGCATGC+CGG | 0.511964 | 7.1:+19670255 | None:intergenic |
| AGAGTCTTCCCCTCGTCTAA+AGG | 0.512658 | 7.1:+19672204 | None:intergenic |
| AAAGTGATGGAGATGGTCTA+CGG | 0.513403 | 7.1:+19670602 | None:intergenic |
| GAAAACTCCTTTGGCAGCAT+CGG | 0.514325 | 7.1:-19671648 | MS.gene067789:CDS |
| ATTGATTTGATTGTAAAGGT+TGG | 0.515505 | 7.1:+19666616 | None:intergenic |
| ATGGAGATGGTCTACGGGTA+GGG | 0.515962 | 7.1:+19670608 | None:intergenic |
| CGTTCTGAGTCTCTAGGTTG+TGG | 0.516311 | 7.1:+19666444 | None:intergenic |
| TCACAATCTAGTATGGGACT+TGG | 0.517620 | 7.1:-19668361 | MS.gene067789:CDS |
| CCAGGAAGGATGGCAGCAGC+CGG | 0.517689 | 7.1:+19670712 | None:intergenic |
| TTTCTGATGCAGCACTTGCG+AGG | 0.520460 | 7.1:-19670582 | MS.gene067789:CDS |
| GGTGCGAGTCGAAAGCTTCA+AGG | 0.521383 | 7.1:-19676507 | MS.gene067789:CDS |
| CTAAATCAGAGACGAGGGAT+TGG | 0.521693 | 7.1:-19674145 | MS.gene067789:CDS |
| AAGGCAGGATTGTTAACTAT+AGG | 0.522524 | 7.1:+19666269 | None:intergenic |
| CCCGGCATGCAATGGAGACC+TGG | 0.522772 | 7.1:-19670256 | MS.gene067789:CDS |
| AGATTGATATTGCCTCAGGT+TGG | 0.523114 | 7.1:-19670370 | MS.gene067789:CDS |
| CTGTGGTTCCCGGCATGCAA+TGG | 0.523496 | 7.1:-19670264 | MS.gene067789:CDS |
| TGCATCATTCTGATTCTGAA+AGG | 0.524446 | 7.1:+19670228 | None:intergenic |
| TTCTGATGCAGCACTTGCGA+GGG | 0.526879 | 7.1:-19670581 | MS.gene067789:CDS |
| TCTTCTACTTCAACACCTAC+TGG | 0.527399 | 7.1:-19670790 | MS.gene067789:CDS |
| CTTATGGTTTCCTCCAACAA+GGG | 0.529416 | 7.1:+19669002 | None:intergenic |
| CAGTGAGATCAAGGATAAGA+AGG | 0.529687 | 7.1:-19676201 | MS.gene067789:intron |
| TTACTCCATACCAATCTAGA+AGG | 0.530474 | 7.1:+19673420 | None:intergenic |
| AAGACCTAATCTCTCCCAAA+AGG | 0.531315 | 7.1:+19666250 | None:intergenic |
| AAATGGATGTTGACCGGACG+GGG | 0.531610 | 7.1:+19668273 | None:intergenic |
| GGTGTTGAACTTGGAGCCAT+TGG | 0.532161 | 7.1:-19666558 | MS.gene067789:CDS |
| CCTAATCTCTCCCAAAAGGC+AGG | 0.532216 | 7.1:+19666254 | None:intergenic |
| TTTGATTGTAAAGGTTGGCC+AGG | 0.532757 | 7.1:+19666621 | None:intergenic |
| AGCTAGAAGGTGTAATTGCT+GGG | 0.533226 | 7.1:+19666309 | None:intergenic |
| GTTTCTTCACAATCTAGTAT+GGG | 0.533671 | 7.1:-19668367 | MS.gene067789:CDS |
| AATATTCAGGGCCAGCTTCG+TGG | 0.536880 | 7.1:-19669120 | MS.gene067789:intron |
| GGAGCCCAATCCCCGAGTCT+CGG | 0.537988 | 7.1:-19668340 | MS.gene067789:CDS |
| AACAGCGTGTCGGTGCCAAA+TGG | 0.538552 | 7.1:+19666224 | None:intergenic |
| GGCATATTAAGAAGGGTACT+AGG | 0.541162 | 7.1:+19669027 | None:intergenic |
| ACTATAGGCGCTTGTACTTG+AGG | 0.541544 | 7.1:+19666284 | None:intergenic |
| CACAAGCGTTGCAGTTGCAA+AGG | 0.541693 | 7.1:-19672406 | MS.gene067789:intron |
| ATGATAGACTTGGAAGTAGT+GGG | 0.543601 | 7.1:-19670426 | MS.gene067789:CDS |
| ATCGAGATCAGATTAAGACT+TGG | 0.543682 | 7.1:-19676232 | MS.gene067789:CDS |
| AGAGTATCAACCTTGTCTAA+AGG | 0.543772 | 7.1:+19672450 | None:intergenic |
| GAAGAAATACCACCGAGACT+CGG | 0.546522 | 7.1:+19668328 | None:intergenic |
| CAAATGGATGTTGACCGGAC+GGG | 0.548195 | 7.1:+19668272 | None:intergenic |
| GGTGAGTGCATCGTATGAGC+AGG | 0.549929 | 7.1:-19675187 | MS.gene067789:CDS |
| AATCTCTTCTTCCTTTGGAG+AGG | 0.549943 | 7.1:+19670639 | None:intergenic |
| CAGGTTGGGAAGGCTAATGA+TGG | 0.550721 | 7.1:-19670355 | MS.gene067789:CDS |
| GCAACAGCCAGCATCCCTCT+TGG | 0.550986 | 7.1:-19670535 | MS.gene067789:CDS |
| TTAGTTATTTCTGAGGCTGA+AGG | 0.554720 | 7.1:+19670469 | None:intergenic |
| GATGATAGACTTGGAAGTAG+TGG | 0.555685 | 7.1:-19670427 | MS.gene067789:CDS |
| CAGTTCATTACCTTTAGACG+AGG | 0.556187 | 7.1:-19672214 | MS.gene067789:CDS |
| AGAATTTGAACCAGGAAGGA+TGG | 0.557522 | 7.1:+19670702 | None:intergenic |
| ACTGAATCTACTTCTAGCAC+AGG | 0.559534 | 7.1:-19667217 | MS.gene067789:CDS |
| AAGATTTAAGATATGTGAGA+AGG | 0.561939 | 7.1:-19675124 | MS.gene067789:CDS |
| GATGGAGATGGTCTACGGGT+AGG | 0.562661 | 7.1:+19670607 | None:intergenic |
| TTTCGAACAGAATTTGAACC+AGG | 0.564460 | 7.1:+19670694 | None:intergenic |
| TTGAGCAGCTTCTGGAAGCG+AGG | 0.565900 | 7.1:+19666668 | None:intergenic |
| GAAGGCCTTACAGTCAAGAA+AGG | 0.566291 | 7.1:-19673453 | MS.gene067789:CDS |
| AATCGATCGTGTTCTCAAGA+AGG | 0.566530 | 7.1:-19676481 | MS.gene067789:CDS |
| TTGAAGATGAACTTGTATGA+AGG | 0.566547 | 7.1:-19665737 | None:intergenic |
| TTGGGAGCTGATGATAGACT+TGG | 0.567830 | 7.1:-19670436 | MS.gene067789:CDS |
| CAGTTCATTACCTTTAGACA+AGG | 0.569168 | 7.1:-19672460 | MS.gene067789:CDS |
| CCAACAATATTTGGCTGCAA+AGG | 0.569845 | 7.1:-19666074 | MS.gene067789:CDS |
| GCTTATGGTTTCCTCCAACA+AGG | 0.570132 | 7.1:+19669001 | None:intergenic |
| GAACAGAATTTGAACCAGGA+AGG | 0.571325 | 7.1:+19670698 | None:intergenic |
| TGGTTTCCTCCAACAAGGGA+AGG | 0.575541 | 7.1:+19669006 | None:intergenic |
| GGAGTAGCATGGTTGCCAGT+AGG | 0.581060 | 7.1:+19670775 | None:intergenic |
| GCAAATGGATGTTGACCGGA+CGG | 0.583535 | 7.1:+19668271 | None:intergenic |
| TTTCAGCAAGTGCAACAACA+AGG | 0.585296 | 7.1:-19669051 | MS.gene067789:CDS |
| TGCATCGTATGAGCAGGCTC+TGG | 0.586683 | 7.1:-19675181 | MS.gene067789:CDS |
| GATATTGCCTCAGGTTGGGA+AGG | 0.593046 | 7.1:-19670365 | MS.gene067789:CDS |
| GTTTCGCTTAGTTATTTCTG+AGG | 0.594348 | 7.1:+19670462 | None:intergenic |
| AGCAGGCTCTGGTGGATGCG+CGG | 0.594538 | 7.1:-19675170 | MS.gene067789:CDS |
| GATCTTGTTACAATTCCCAC+TGG | 0.594765 | 7.1:-19672177 | MS.gene067789:CDS |
| GACATCAATCACTCGGCACA+AGG | 0.595159 | 7.1:-19673313 | MS.gene067789:CDS |
| AATATCAATCTATTACTTAG+CGG | 0.596383 | 7.1:+19670382 | None:intergenic |
| TATGTGCAGTTCAACTCTCA+AGG | 0.597960 | 7.1:-19668397 | MS.gene067789:intron |
| ACGATGACCTGCAACATGGA+TGG | 0.598748 | 7.1:-19665922 | MS.gene067789:intron |
| AACCCACCTCCTAAAAGTGG+TGG | 0.598883 | 7.1:-19670820 | MS.gene067789:CDS |
| TACTGACAATGCTAATCAGA+AGG | 0.600973 | 7.1:-19676303 | MS.gene067789:CDS |
| ATCTGGAGACATCAATCACT+CGG | 0.601849 | 7.1:-19673320 | MS.gene067789:CDS |
| AAGTGATGGAGATGGTCTAC+GGG | 0.601856 | 7.1:+19670603 | None:intergenic |
| GCATCAAGTGTTAATTCTGG+TGG | 0.602917 | 7.1:-19666522 | MS.gene067789:CDS |
| ATCGTATGAGCAGGCTCTGG+TGG | 0.603691 | 7.1:-19675178 | MS.gene067789:CDS |
| GGATAACAATTCTGACATTG+TGG | 0.603942 | 7.1:-19670848 | MS.gene067789:CDS |
| AAGGGAAGGCATATTAAGAA+GGG | 0.605813 | 7.1:+19669020 | None:intergenic |
| ATTTGAAGCTGATCTCAAGA+AGG | 0.606635 | 7.1:-19676276 | MS.gene067789:CDS |
| GCTACAGATGATTATGAGCA+GGG | 0.607588 | 7.1:-19665977 | MS.gene067789:CDS |
| AATTCCCACTGGTCTTGCAA+AGG | 0.608328 | 7.1:-19672166 | MS.gene067789:intron |
| CTGGCAGGATCCGAGAGAGA+AGG | 0.608515 | 7.1:-19674168 | MS.gene067789:intron |
| CTTCGACAGTATCTGGAACA+AGG | 0.610457 | 7.1:-19676439 | MS.gene067789:intron |
| TGCGATGCCGATGCTGCCAA+AGG | 0.611661 | 7.1:+19671641 | None:intergenic |
| ATGCGCGGAAGCTGATTGAA+CGG | 0.612379 | 7.1:-19675155 | MS.gene067789:CDS |
| AGTTCATTACCTTTAGACGA+GGG | 0.612570 | 7.1:-19672213 | MS.gene067789:CDS |
| TCTGATGCAGCACTTGCGAG+GGG | 0.616079 | 7.1:-19670580 | MS.gene067789:CDS |
| AAATCAGTCTACCTCTCCAA+AGG | 0.617908 | 7.1:-19670650 | MS.gene067789:CDS |
| AATACCTTTGCAAGACCAGT+GGG | 0.619411 | 7.1:+19672162 | None:intergenic |
| GAAGGCTAAATCAGAGACGA+GGG | 0.619561 | 7.1:-19674150 | MS.gene067789:CDS |
| TATCAATCTATTACTTAGCG+GGG | 0.620563 | 7.1:+19670384 | None:intergenic |
| AGTGCTGCATCAGAAAGTGA+TGG | 0.621828 | 7.1:+19670589 | None:intergenic |
| GCATGCCGGGAACCACAGAA+GGG | 0.623579 | 7.1:+19670269 | None:intergenic |
| ATATAATTTACAAATGCTTG+AGG | 0.626095 | 7.1:-19666484 | MS.gene067789:CDS |
| TTACTTAGCGGGGATACAAG+AGG | 0.626317 | 7.1:+19670394 | None:intergenic |
| ACCATGTATTATACTTTCGG+TGG | 0.629686 | 7.1:+19666026 | None:intergenic |
| TTCTTCTTCCAATGACGCCG+AGG | 0.632250 | 7.1:+19666583 | None:intergenic |
| TTCAGCAAGTGCAACAACAA+GGG | 0.634041 | 7.1:-19669050 | MS.gene067789:CDS |
| TGACAGAAGCAGGAGTAGCA+TGG | 0.635173 | 7.1:+19670764 | None:intergenic |
| AGTATAATACATGGTTTCAG+CGG | 0.642035 | 7.1:-19666018 | MS.gene067789:CDS |
| TGCACCAAAGCTATCACCAA+TGG | 0.643671 | 7.1:+19666542 | None:intergenic |
| AATCAATCTACTGGAAACCT+CGG | 0.644537 | 7.1:-19666600 | MS.gene067789:CDS |
| CGACGAATTGAGTCCAGAGG+AGG | 0.644755 | 7.1:-19673247 | MS.gene067789:CDS |
| GGCTGAAGGAACTACACCAA+GGG | 0.645636 | 7.1:+19670483 | None:intergenic |
| GCCCAATCCCCGAGTCTCGG+TGG | 0.645679 | 7.1:-19668337 | MS.gene067789:CDS |
| CCGTGTTTCCAGAACCAAGA+GGG | 0.646698 | 7.1:+19670521 | None:intergenic |
| GTTCTCAAGAAGGTTCAAGA+AGG | 0.648272 | 7.1:-19676471 | MS.gene067789:CDS |
| AAATACCTTTGCAAGACCAG+TGG | 0.652464 | 7.1:+19672161 | None:intergenic |
| ACCACCGAAAGTATAATACA+TGG | 0.654500 | 7.1:-19666027 | MS.gene067789:CDS |
| TCATTAGCCTTCCCAACCTG+AGG | 0.654783 | 7.1:+19670358 | None:intergenic |
| CATGCCGGGAACCACAGAAG+GGG | 0.660364 | 7.1:+19670270 | None:intergenic |
| AGAAGGCTAAATCAGAGACG+AGG | 0.662779 | 7.1:-19674151 | MS.gene067789:CDS |
| GTTCATTACCTTTAGACGAG+GGG | 0.663536 | 7.1:-19672212 | MS.gene067789:CDS |
| GCAAACGATGACCTGCAACA+TGG | 0.671292 | 7.1:-19665926 | MS.gene067789:CDS |
| AAATGCAAAGAACAGCGTGT+CGG | 0.676022 | 7.1:+19666214 | None:intergenic |
| AGAAATACCACCGAGACTCG+GGG | 0.686518 | 7.1:+19668330 | None:intergenic |
| GCATCAGAAAGTGATGGAGA+TGG | 0.686956 | 7.1:+19670595 | None:intergenic |
| AGGCTGAAGGAACTACACCA+AGG | 0.696409 | 7.1:+19670482 | None:intergenic |
| TAACGACGAATTGAGTCCAG+AGG | 0.700088 | 7.1:-19673250 | MS.gene067789:CDS |
| GAGGGATTGGTTAAACAATG+TGG | 0.706747 | 7.1:-19674132 | MS.gene067789:intron |
| TAGACTTGGAAGTAGTGGGA+TGG | 0.729880 | 7.1:-19670422 | MS.gene067789:CDS |
| AACGATACTAGAGTCAACAG+AGG | 0.745215 | 7.1:+19670327 | None:intergenic |
| ACCGTGTTTCCAGAACCAAG+AGG | 0.768565 | 7.1:+19670520 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 19665740 | 19676532 | 19665740 | ID=MS.gene067789 |
| chr7.1 | mRNA | 19665740 | 19676532 | 19665740 | ID=MS.gene067789.t1;Parent=MS.gene067789 |
| chr7.1 | exon | 19676440 | 19676532 | 19676440 | ID=MS.gene067789.t1.exon1;Parent=MS.gene067789.t1 |
| chr7.1 | CDS | 19676440 | 19676532 | 19676440 | ID=cds.MS.gene067789.t1;Parent=MS.gene067789.t1 |
| chr7.1 | exon | 19676202 | 19676333 | 19676202 | ID=MS.gene067789.t1.exon2;Parent=MS.gene067789.t1 |
| chr7.1 | CDS | 19676202 | 19676333 | 19676202 | ID=cds.MS.gene067789.t1;Parent=MS.gene067789.t1 |
| chr7.1 | exon | 19675071 | 19675208 | 19675071 | ID=MS.gene067789.t1.exon3;Parent=MS.gene067789.t1 |
| chr7.1 | CDS | 19675071 | 19675208 | 19675071 | ID=cds.MS.gene067789.t1;Parent=MS.gene067789.t1 |
| chr7.1 | exon | 19674133 | 19674183 | 19674133 | ID=MS.gene067789.t1.exon4;Parent=MS.gene067789.t1 |
| chr7.1 | CDS | 19674133 | 19674183 | 19674133 | ID=cds.MS.gene067789.t1;Parent=MS.gene067789.t1 |
| chr7.1 | exon | 19673431 | 19673520 | 19673431 | ID=MS.gene067789.t1.exon5;Parent=MS.gene067789.t1 |
| chr7.1 | CDS | 19673431 | 19673520 | 19673431 | ID=cds.MS.gene067789.t1;Parent=MS.gene067789.t1 |
| chr7.1 | exon | 19673200 | 19673346 | 19673200 | ID=MS.gene067789.t1.exon6;Parent=MS.gene067789.t1 |
| chr7.1 | CDS | 19673200 | 19673346 | 19673200 | ID=cds.MS.gene067789.t1;Parent=MS.gene067789.t1 |
| chr7.1 | exon | 19672407 | 19672520 | 19672407 | ID=MS.gene067789.t1.exon7;Parent=MS.gene067789.t1 |
| chr7.1 | CDS | 19672407 | 19672520 | 19672407 | ID=cds.MS.gene067789.t1;Parent=MS.gene067789.t1 |
| chr7.1 | exon | 19672167 | 19672241 | 19672167 | ID=MS.gene067789.t1.exon8;Parent=MS.gene067789.t1 |
| chr7.1 | CDS | 19672167 | 19672241 | 19672167 | ID=cds.MS.gene067789.t1;Parent=MS.gene067789.t1 |
| chr7.1 | exon | 19671619 | 19671690 | 19671619 | ID=MS.gene067789.t1.exon9;Parent=MS.gene067789.t1 |
| chr7.1 | CDS | 19671619 | 19671690 | 19671619 | ID=cds.MS.gene067789.t1;Parent=MS.gene067789.t1 |
| chr7.1 | exon | 19670228 | 19670896 | 19670228 | ID=MS.gene067789.t1.exon10;Parent=MS.gene067789.t1 |
| chr7.1 | CDS | 19670228 | 19670896 | 19670228 | ID=cds.MS.gene067789.t1;Parent=MS.gene067789.t1 |
| chr7.1 | exon | 19668963 | 19669133 | 19668963 | ID=MS.gene067789.t1.exon11;Parent=MS.gene067789.t1 |
| chr7.1 | CDS | 19668963 | 19669133 | 19668963 | ID=cds.MS.gene067789.t1;Parent=MS.gene067789.t1 |
| chr7.1 | exon | 19668251 | 19668410 | 19668251 | ID=MS.gene067789.t1.exon12;Parent=MS.gene067789.t1 |
| chr7.1 | CDS | 19668251 | 19668410 | 19668251 | ID=cds.MS.gene067789.t1;Parent=MS.gene067789.t1 |
| chr7.1 | exon | 19667156 | 19667289 | 19667156 | ID=MS.gene067789.t1.exon13;Parent=MS.gene067789.t1 |
| chr7.1 | CDS | 19667156 | 19667289 | 19667156 | ID=cds.MS.gene067789.t1;Parent=MS.gene067789.t1 |
| chr7.1 | exon | 19666425 | 19666703 | 19666425 | ID=MS.gene067789.t1.exon14;Parent=MS.gene067789.t1 |
| chr7.1 | CDS | 19666425 | 19666703 | 19666425 | ID=cds.MS.gene067789.t1;Parent=MS.gene067789.t1 |
| chr7.1 | exon | 19666202 | 19666336 | 19666202 | ID=MS.gene067789.t1.exon15;Parent=MS.gene067789.t1 |
| chr7.1 | CDS | 19666202 | 19666336 | 19666202 | ID=cds.MS.gene067789.t1;Parent=MS.gene067789.t1 |
| chr7.1 | exon | 19665923 | 19666104 | 19665923 | ID=MS.gene067789.t1.exon16;Parent=MS.gene067789.t1 |
| chr7.1 | CDS | 19665923 | 19666104 | 19665923 | ID=cds.MS.gene067789.t1;Parent=MS.gene067789.t1 |
| chr7.1 | exon | 19665740 | 19665803 | 19665740 | ID=MS.gene067789.t1.exon17;Parent=MS.gene067789.t1 |
| chr7.1 | CDS | 19665740 | 19665803 | 19665740 | ID=cds.MS.gene067789.t1;Parent=MS.gene067789.t1 |
| Gene Sequence |
| Protein sequence |
