Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067826.t1 | XP_003624650.1 | 91 | 465 | 41 | 1 | 1 | 464 | 1 | 465 | 4.60E-246 | 860.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067826.t1 | O64470 | 35.6 | 463 | 279 | 12 | 1 | 456 | 1 | 451 | 2.0e-72 | 274.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067826.t1 | Q2HVM4 | 91.0 | 465 | 41 | 1 | 1 | 464 | 1 | 465 | 3.3e-246 | 860.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene052616 | MS.gene067826 | 0.800984 | 1.12E-48 | -1.69E-46 |
MS.gene053166 | MS.gene067826 | 0.806475 | 8.08E-50 | -1.69E-46 |
MS.gene054559 | MS.gene067826 | 0.80557 | 1.25E-49 | -1.69E-46 |
MS.gene056173 | MS.gene067826 | 0.839259 | 1.76E-57 | -1.69E-46 |
MS.gene058979 | MS.gene067826 | 0.800934 | 1.14E-48 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067826.t1 | MTR_7g086000 | 94.194 | 465 | 26 | 1 | 1 | 464 | 1 | 465 | 0.0 | 871 |
MS.gene067826.t1 | MTR_7g085990 | 44.654 | 477 | 236 | 12 | 4 | 464 | 2 | 466 | 4.01e-132 | 390 |
MS.gene067826.t1 | MTR_7g085930 | 44.351 | 478 | 236 | 12 | 4 | 464 | 6 | 470 | 9.39e-126 | 374 |
MS.gene067826.t1 | MTR_7g085960 | 72.368 | 228 | 33 | 2 | 237 | 464 | 1 | 198 | 4.13e-114 | 334 |
MS.gene067826.t1 | MTR_4g127650 | 38.745 | 462 | 259 | 13 | 4 | 456 | 10 | 456 | 3.65e-95 | 295 |
MS.gene067826.t1 | MTR_3g049150 | 36.325 | 468 | 278 | 12 | 4 | 464 | 2 | 456 | 2.73e-93 | 290 |
MS.gene067826.t1 | MTR_3g026950 | 37.259 | 467 | 262 | 14 | 4 | 456 | 2 | 451 | 3.64e-87 | 274 |
MS.gene067826.t1 | MTR_4g013050 | 36.226 | 461 | 238 | 11 | 1 | 456 | 1 | 410 | 2.06e-86 | 271 |
MS.gene067826.t1 | MTR_4g097090 | 37.445 | 454 | 265 | 12 | 10 | 456 | 15 | 456 | 8.13e-86 | 271 |
MS.gene067826.t1 | MTR_4g007540 | 33.700 | 454 | 274 | 13 | 4 | 454 | 3 | 432 | 2.26e-80 | 256 |
MS.gene067826.t1 | MTR_2g105330 | 33.040 | 454 | 276 | 13 | 4 | 454 | 3 | 431 | 1.43e-79 | 254 |
MS.gene067826.t1 | MTR_2g064495 | 32.599 | 454 | 278 | 13 | 4 | 454 | 3 | 431 | 9.95e-78 | 249 |
MS.gene067826.t1 | MTR_8g075610 | 34.346 | 428 | 249 | 14 | 31 | 454 | 20 | 419 | 7.35e-76 | 244 |
MS.gene067826.t1 | MTR_3g098980 | 33.415 | 410 | 226 | 18 | 12 | 412 | 22 | 393 | 3.10e-54 | 187 |
MS.gene067826.t1 | MTR_8g096530 | 32.057 | 418 | 242 | 14 | 2 | 412 | 5 | 387 | 3.87e-53 | 185 |
MS.gene067826.t1 | MTR_7g027175 | 32.178 | 404 | 232 | 15 | 11 | 407 | 23 | 391 | 4.68e-50 | 176 |
MS.gene067826.t1 | MTR_7g085970 | 60.811 | 148 | 28 | 4 | 43 | 189 | 8 | 126 | 4.16e-47 | 159 |
MS.gene067826.t1 | MTR_1g040215 | 27.407 | 405 | 250 | 14 | 12 | 407 | 17 | 386 | 8.50e-40 | 149 |
MS.gene067826.t1 | MTR_1g040175 | 28.747 | 407 | 242 | 17 | 11 | 406 | 16 | 385 | 1.57e-39 | 148 |
MS.gene067826.t1 | MTR_3g049140 | 35.496 | 262 | 152 | 11 | 210 | 464 | 2 | 253 | 1.85e-39 | 143 |
MS.gene067826.t1 | MTR_7g084940 | 27.765 | 425 | 268 | 15 | 2 | 420 | 14 | 405 | 9.81e-39 | 146 |
MS.gene067826.t1 | MTR_7g084910 | 28.868 | 433 | 239 | 18 | 2 | 420 | 15 | 392 | 4.37e-38 | 144 |
MS.gene067826.t1 | MTR_1g053315 | 28.274 | 481 | 292 | 20 | 2 | 460 | 16 | 465 | 3.95e-36 | 139 |
MS.gene067826.t1 | MTR_5g076700 | 25.951 | 447 | 277 | 17 | 11 | 440 | 17 | 426 | 5.36e-33 | 130 |
MS.gene067826.t1 | MTR_5g090810 | 28.346 | 381 | 216 | 15 | 54 | 407 | 61 | 411 | 6.48e-33 | 130 |
MS.gene067826.t1 | MTR_1g040195 | 27.020 | 396 | 235 | 18 | 73 | 454 | 55 | 410 | 8.92e-33 | 129 |
MS.gene067826.t1 | MTR_7g114490 | 26.840 | 462 | 272 | 19 | 11 | 451 | 17 | 433 | 2.46e-32 | 129 |
MS.gene067826.t1 | MTR_5g090830 | 28.609 | 381 | 215 | 15 | 54 | 407 | 61 | 411 | 3.85e-32 | 128 |
MS.gene067826.t1 | MTR_3g101930 | 29.177 | 401 | 232 | 17 | 44 | 424 | 54 | 422 | 3.99e-32 | 127 |
MS.gene067826.t1 | MTR_7g056087 | 24.781 | 456 | 292 | 15 | 1 | 440 | 1 | 421 | 5.62e-32 | 127 |
MS.gene067826.t1 | MTR_7g114470 | 25.942 | 451 | 273 | 19 | 11 | 440 | 18 | 428 | 1.33e-31 | 126 |
MS.gene067826.t1 | MTR_3g071320 | 28.108 | 370 | 244 | 11 | 3 | 362 | 4 | 361 | 3.91e-31 | 124 |
MS.gene067826.t1 | MTR_1g081660 | 24.570 | 407 | 273 | 11 | 5 | 406 | 17 | 394 | 4.14e-31 | 125 |
MS.gene067826.t1 | MTR_3g086020 | 25.800 | 469 | 279 | 18 | 2 | 460 | 3 | 412 | 1.08e-30 | 123 |
MS.gene067826.t1 | MTR_2g015430 | 29.117 | 419 | 252 | 15 | 57 | 463 | 56 | 441 | 4.22e-30 | 122 |
MS.gene067826.t1 | MTR_5g090880 | 27.020 | 396 | 231 | 16 | 42 | 407 | 46 | 413 | 5.08e-30 | 122 |
MS.gene067826.t1 | MTR_1g040315 | 27.253 | 466 | 244 | 22 | 12 | 464 | 17 | 400 | 7.56e-30 | 120 |
MS.gene067826.t1 | MTR_7g114550 | 25.466 | 483 | 288 | 22 | 1 | 459 | 7 | 441 | 1.16e-29 | 120 |
MS.gene067826.t1 | MTR_7g114520 | 25.161 | 465 | 289 | 20 | 11 | 457 | 18 | 441 | 1.37e-29 | 120 |
MS.gene067826.t1 | MTR_3g112180 | 28.700 | 446 | 254 | 18 | 12 | 438 | 20 | 420 | 3.36e-29 | 119 |
MS.gene067826.t1 | MTR_3g465990 | 26.620 | 432 | 266 | 18 | 4 | 416 | 10 | 409 | 3.93e-29 | 119 |
MS.gene067826.t1 | MTR_1g040320 | 25.495 | 404 | 223 | 12 | 11 | 406 | 16 | 349 | 4.16e-29 | 119 |
MS.gene067826.t1 | MTR_3g101900 | 28.645 | 391 | 220 | 17 | 62 | 431 | 69 | 421 | 4.77e-29 | 119 |
MS.gene067826.t1 | MTR_4g055170 | 25.926 | 432 | 264 | 16 | 2 | 412 | 10 | 406 | 7.89e-29 | 118 |
MS.gene067826.t1 | MTR_3g465980 | 27.356 | 435 | 259 | 18 | 4 | 416 | 10 | 409 | 2.72e-28 | 117 |
MS.gene067826.t1 | MTR_8g079980 | 26.712 | 438 | 272 | 18 | 6 | 433 | 6 | 404 | 2.89e-28 | 116 |
MS.gene067826.t1 | MTR_7g114560 | 24.946 | 465 | 293 | 18 | 11 | 459 | 17 | 441 | 3.95e-28 | 116 |
MS.gene067826.t1 | MTR_7g014200 | 23.975 | 488 | 310 | 17 | 3 | 456 | 8 | 468 | 5.40e-28 | 116 |
MS.gene067826.t1 | MTR_7g014160 | 26.210 | 496 | 294 | 23 | 3 | 456 | 8 | 473 | 1.15e-27 | 115 |
MS.gene067826.t1 | MTR_6g053810 | 28.312 | 385 | 232 | 17 | 3 | 365 | 8 | 370 | 2.61e-27 | 114 |
MS.gene067826.t1 | MTR_3g070170 | 27.352 | 457 | 248 | 20 | 12 | 424 | 20 | 436 | 5.08e-27 | 113 |
MS.gene067826.t1 | MTR_7g014250 | 24.792 | 480 | 307 | 14 | 5 | 456 | 3 | 456 | 7.19e-27 | 112 |
MS.gene067826.t1 | MTR_2g007880 | 23.044 | 473 | 310 | 14 | 1 | 459 | 14 | 446 | 3.18e-26 | 111 |
MS.gene067826.t1 | MTR_7g014330 | 26.216 | 473 | 294 | 15 | 9 | 456 | 14 | 456 | 3.43e-26 | 110 |
MS.gene067826.t1 | MTR_3g465930 | 28.609 | 381 | 235 | 15 | 2 | 363 | 8 | 370 | 4.89e-26 | 110 |
MS.gene067826.t1 | MTR_3g450710 | 26.064 | 376 | 219 | 15 | 59 | 406 | 65 | 409 | 1.14e-25 | 109 |
MS.gene067826.t1 | MTR_3g101960 | 28.148 | 405 | 239 | 20 | 62 | 449 | 71 | 440 | 1.48e-25 | 108 |
MS.gene067826.t1 | MTR_1g094790 | 25.118 | 422 | 268 | 12 | 2 | 407 | 1 | 390 | 2.15e-25 | 108 |
MS.gene067826.t1 | MTR_3g102020 | 27.020 | 396 | 237 | 19 | 62 | 440 | 72 | 432 | 4.78e-25 | 107 |
MS.gene067826.t1 | MTR_3g450690 | 26.005 | 373 | 220 | 15 | 59 | 406 | 72 | 413 | 7.28e-25 | 107 |
MS.gene067826.t1 | MTR_0190s0020 | 27.628 | 409 | 239 | 17 | 59 | 449 | 63 | 432 | 7.58e-25 | 107 |
MS.gene067826.t1 | MTR_5g026320 | 26.651 | 439 | 284 | 17 | 19 | 449 | 35 | 443 | 1.33e-24 | 106 |
MS.gene067826.t1 | MTR_7g110610 | 26.316 | 456 | 239 | 21 | 11 | 453 | 12 | 383 | 2.08e-24 | 104 |
MS.gene067826.t1 | MTR_7g014610 | 25.820 | 488 | 309 | 20 | 3 | 456 | 7 | 475 | 3.23e-24 | 105 |
MS.gene067826.t1 | MTR_3g101970 | 27.009 | 448 | 254 | 20 | 19 | 440 | 18 | 418 | 6.92e-24 | 103 |
MS.gene067826.t1 | MTR_3g465910 | 28.721 | 383 | 229 | 20 | 2 | 363 | 8 | 367 | 8.21e-24 | 104 |
MS.gene067826.t1 | MTR_3g102010 | 27.000 | 400 | 236 | 19 | 62 | 440 | 68 | 432 | 9.52e-24 | 103 |
MS.gene067826.t1 | MTR_7g014230 | 25.358 | 489 | 307 | 15 | 1 | 459 | 1 | 461 | 1.23e-23 | 103 |
MS.gene067826.t1 | MTR_8g041770 | 26.859 | 417 | 254 | 16 | 47 | 448 | 50 | 430 | 1.26e-23 | 103 |
MS.gene067826.t1 | MTR_6g045553 | 24.946 | 465 | 264 | 17 | 2 | 420 | 12 | 437 | 3.07e-23 | 102 |
MS.gene067826.t1 | MTR_4g094842 | 26.464 | 461 | 279 | 19 | 9 | 448 | 16 | 437 | 6.84e-23 | 101 |
MS.gene067826.t1 | MTR_5g084870 | 22.414 | 464 | 301 | 15 | 2 | 452 | 1 | 418 | 6.84e-23 | 101 |
MS.gene067826.t1 | MTR_3g465950 | 28.440 | 327 | 204 | 11 | 2 | 313 | 8 | 319 | 1.36e-22 | 100 |
MS.gene067826.t1 | MTR_8g079970 | 24.009 | 454 | 292 | 17 | 2 | 442 | 1 | 414 | 2.92e-22 | 99.4 |
MS.gene067826.t1 | MTR_2g045550 | 37.241 | 145 | 80 | 2 | 1 | 145 | 1 | 134 | 5.23e-22 | 92.4 |
MS.gene067826.t1 | MTR_3g465880 | 26.591 | 440 | 267 | 18 | 2 | 416 | 8 | 416 | 6.54e-22 | 98.6 |
MS.gene067826.t1 | MTR_8g467580 | 25.236 | 424 | 258 | 15 | 4 | 407 | 1 | 385 | 1.20e-21 | 97.4 |
MS.gene067826.t1 | MTR_7g014620 | 26.419 | 458 | 287 | 19 | 17 | 456 | 7 | 432 | 2.15e-21 | 96.7 |
MS.gene067826.t1 | MTR_8g467590 | 24.078 | 461 | 284 | 18 | 11 | 449 | 10 | 426 | 2.72e-21 | 96.3 |
MS.gene067826.t1 | MTR_6g015830 | 24.262 | 474 | 306 | 18 | 10 | 459 | 19 | 463 | 7.32e-21 | 95.1 |
MS.gene067826.t1 | MTR_7g013850 | 23.146 | 445 | 263 | 17 | 59 | 456 | 68 | 480 | 1.36e-20 | 94.7 |
MS.gene067826.t1 | MTR_0502s0010 | 29.771 | 262 | 144 | 12 | 98 | 344 | 2 | 238 | 1.83e-20 | 90.5 |
MS.gene067826.t1 | MTR_5g081960 | 23.409 | 487 | 265 | 16 | 12 | 431 | 14 | 459 | 1.85e-20 | 94.4 |
MS.gene067826.t1 | MTR_3g088420 | 27.072 | 362 | 225 | 16 | 62 | 413 | 58 | 390 | 2.83e-20 | 93.2 |
MS.gene067826.t1 | MTR_3g465870 | 27.907 | 301 | 195 | 9 | 2 | 292 | 10 | 298 | 7.28e-20 | 92.0 |
MS.gene067826.t1 | MTR_2g089735 | 25.858 | 437 | 272 | 16 | 1 | 407 | 1 | 415 | 6.47e-19 | 89.4 |
MS.gene067826.t1 | MTR_7g026860 | 27.049 | 366 | 213 | 16 | 62 | 407 | 58 | 389 | 6.72e-19 | 89.4 |
MS.gene067826.t1 | MTR_4g022825 | 26.933 | 401 | 240 | 19 | 59 | 440 | 55 | 421 | 7.21e-19 | 89.0 |
MS.gene067826.t1 | MTR_4g022290 | 24.413 | 426 | 252 | 16 | 59 | 458 | 60 | 441 | 7.61e-19 | 89.0 |
MS.gene067826.t1 | MTR_8g079710 | 26.161 | 409 | 234 | 15 | 59 | 440 | 59 | 426 | 7.75e-19 | 89.0 |
MS.gene067826.t1 | MTR_4g094835 | 25.971 | 412 | 247 | 20 | 57 | 448 | 62 | 435 | 1.03e-18 | 88.6 |
MS.gene067826.t1 | MTR_4g015180 | 26.850 | 473 | 267 | 23 | 12 | 431 | 14 | 460 | 1.90e-18 | 88.2 |
MS.gene067826.t1 | MTR_5g084850 | 23.355 | 471 | 307 | 16 | 2 | 464 | 1 | 425 | 1.99e-18 | 87.8 |
MS.gene067826.t1 | MTR_6g015315 | 20.542 | 443 | 298 | 13 | 39 | 457 | 41 | 453 | 7.08e-18 | 86.3 |
MS.gene067826.t1 | MTR_3g026310 | 25.000 | 416 | 253 | 17 | 59 | 448 | 55 | 437 | 1.19e-17 | 85.5 |
MS.gene067826.t1 | MTR_1g035890 | 26.518 | 313 | 193 | 11 | 9 | 308 | 14 | 302 | 1.38e-17 | 85.1 |
MS.gene067826.t1 | MTR_2g089650 | 25.342 | 438 | 266 | 20 | 3 | 407 | 8 | 417 | 1.89e-17 | 85.1 |
MS.gene067826.t1 | MTR_3g028210 | 26.790 | 433 | 259 | 19 | 6 | 407 | 11 | 416 | 2.03e-17 | 84.7 |
MS.gene067826.t1 | MTR_4g022670 | 25.123 | 406 | 244 | 19 | 40 | 416 | 32 | 406 | 6.30e-17 | 83.2 |
MS.gene067826.t1 | MTR_4g022720 | 26.185 | 401 | 248 | 19 | 62 | 448 | 58 | 424 | 1.26e-16 | 82.4 |
MS.gene067826.t1 | MTR_2g089765 | 23.944 | 497 | 306 | 17 | 7 | 461 | 21 | 487 | 4.91e-16 | 80.9 |
MS.gene067826.t1 | MTR_4g007460 | 34.722 | 144 | 78 | 5 | 74 | 215 | 2 | 131 | 1.02e-15 | 74.7 |
MS.gene067826.t1 | MTR_4g022760 | 27.393 | 303 | 196 | 13 | 62 | 352 | 58 | 348 | 1.59e-15 | 78.6 |
MS.gene067826.t1 | MTR_4g022800 | 25.266 | 376 | 223 | 17 | 62 | 413 | 58 | 399 | 2.98e-15 | 78.2 |
MS.gene067826.t1 | MTR_3g087640 | 22.449 | 490 | 318 | 19 | 6 | 459 | 12 | 475 | 3.31e-15 | 78.2 |
MS.gene067826.t1 | MTR_4g094838 | 24.590 | 427 | 236 | 17 | 49 | 448 | 54 | 421 | 8.80e-15 | 76.6 |
MS.gene067826.t1 | MTR_3g100150 | 25.552 | 317 | 198 | 10 | 5 | 308 | 12 | 303 | 1.38e-14 | 76.3 |
MS.gene067826.t1 | MTR_2g045540 | 39.048 | 105 | 50 | 4 | 210 | 313 | 2 | 93 | 1.06e-13 | 67.8 |
MS.gene067826.t1 | MTR_2g036780 | 25.758 | 264 | 167 | 7 | 24 | 280 | 34 | 275 | 1.55e-13 | 72.8 |
MS.gene067826.t1 | MTR_0042s0190 | 25.333 | 300 | 181 | 15 | 162 | 450 | 3 | 270 | 1.62e-13 | 71.6 |
MS.gene067826.t1 | MTR_2g089670 | 24.615 | 390 | 248 | 14 | 40 | 407 | 64 | 429 | 2.07e-13 | 72.4 |
MS.gene067826.t1 | MTR_7g014360 | 23.399 | 406 | 252 | 11 | 69 | 456 | 22 | 386 | 2.16e-13 | 72.0 |
MS.gene067826.t1 | MTR_7g014630 | 28.796 | 191 | 108 | 7 | 3 | 176 | 8 | 187 | 8.68e-13 | 70.1 |
MS.gene067826.t1 | MTR_7g114960 | 23.547 | 327 | 192 | 11 | 59 | 363 | 63 | 353 | 4.28e-12 | 68.2 |
MS.gene067826.t1 | MTR_0042s0190 | 27.551 | 196 | 117 | 8 | 262 | 450 | 28 | 205 | 3.00e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067826.t1 | AT2G19070 | 37.149 | 463 | 272 | 12 | 1 | 456 | 1 | 451 | 5.61e-100 | 307 |
MS.gene067826.t1 | AT5G48930 | 32.237 | 456 | 282 | 12 | 2 | 454 | 1 | 432 | 3.00e-74 | 240 |
MS.gene067826.t1 | AT5G57840 | 31.739 | 460 | 283 | 13 | 2 | 454 | 1 | 436 | 1.66e-64 | 215 |
MS.gene067826.t1 | AT5G41040 | 31.250 | 416 | 242 | 16 | 2 | 407 | 13 | 394 | 8.74e-56 | 192 |
MS.gene067826.t1 | AT5G41040 | 31.250 | 416 | 242 | 16 | 2 | 407 | 29 | 410 | 9.54e-56 | 192 |
MS.gene067826.t1 | AT3G48720 | 32.518 | 409 | 224 | 20 | 11 | 407 | 16 | 384 | 2.45e-48 | 172 |
MS.gene067826.t1 | AT5G63560 | 31.450 | 407 | 227 | 16 | 11 | 407 | 16 | 380 | 1.89e-46 | 166 |
MS.gene067826.t1 | AT1G65450 | 26.866 | 469 | 294 | 15 | 2 | 456 | 16 | 449 | 1.55e-40 | 151 |
MS.gene067826.t1 | AT5G17540 | 25.261 | 479 | 299 | 22 | 3 | 464 | 8 | 444 | 1.16e-35 | 138 |
MS.gene067826.t1 | AT3G03480 | 25.833 | 480 | 297 | 18 | 2 | 463 | 15 | 453 | 1.26e-35 | 137 |
MS.gene067826.t1 | AT3G26040 | 27.609 | 460 | 288 | 16 | 11 | 464 | 10 | 430 | 1.43e-35 | 137 |
MS.gene067826.t1 | AT1G24430 | 28.211 | 436 | 270 | 14 | 2 | 433 | 3 | 399 | 2.13e-34 | 134 |
MS.gene067826.t1 | AT2G40230 | 28.777 | 417 | 249 | 14 | 4 | 407 | 5 | 386 | 4.91e-34 | 132 |
MS.gene067826.t1 | AT1G27620 | 28.667 | 450 | 272 | 18 | 11 | 453 | 16 | 423 | 1.95e-33 | 131 |
MS.gene067826.t1 | AT3G29635 | 25.322 | 466 | 286 | 16 | 22 | 459 | 26 | 457 | 2.61e-33 | 131 |
MS.gene067826.t1 | AT1G03390 | 27.119 | 472 | 292 | 18 | 2 | 452 | 15 | 455 | 4.86e-33 | 130 |
MS.gene067826.t1 | AT1G78990 | 27.978 | 361 | 216 | 14 | 59 | 407 | 67 | 395 | 2.34e-32 | 128 |
MS.gene067826.t1 | AT1G32910 | 27.123 | 365 | 233 | 13 | 52 | 407 | 58 | 398 | 4.08e-32 | 128 |
MS.gene067826.t1 | AT5G07080 | 28.571 | 413 | 258 | 18 | 11 | 412 | 21 | 407 | 4.40e-32 | 127 |
MS.gene067826.t1 | AT3G30280 | 26.258 | 457 | 278 | 14 | 11 | 450 | 13 | 427 | 1.78e-30 | 123 |
MS.gene067826.t1 | AT3G62160 | 25.476 | 420 | 241 | 17 | 11 | 412 | 12 | 377 | 6.39e-30 | 121 |
MS.gene067826.t1 | AT4G15390 | 26.782 | 463 | 269 | 18 | 11 | 450 | 15 | 430 | 2.36e-29 | 120 |
MS.gene067826.t1 | AT4G15390 | 26.782 | 463 | 269 | 18 | 11 | 450 | 15 | 430 | 2.36e-29 | 120 |
MS.gene067826.t1 | AT1G28680 | 25.995 | 427 | 265 | 14 | 1 | 412 | 1 | 391 | 3.50e-29 | 119 |
MS.gene067826.t1 | AT2G25150 | 27.714 | 433 | 274 | 16 | 11 | 432 | 20 | 424 | 1.70e-28 | 117 |
MS.gene067826.t1 | AT3G29670 | 25.000 | 424 | 272 | 17 | 44 | 452 | 53 | 445 | 1.71e-28 | 117 |
MS.gene067826.t1 | AT3G47170 | 27.835 | 388 | 238 | 16 | 11 | 372 | 19 | 390 | 8.95e-26 | 110 |
MS.gene067826.t1 | AT5G16410 | 24.384 | 365 | 227 | 14 | 57 | 407 | 89 | 418 | 1.24e-25 | 109 |
MS.gene067826.t1 | AT2G23510 | 26.699 | 412 | 263 | 16 | 11 | 412 | 20 | 402 | 2.96e-25 | 108 |
MS.gene067826.t1 | AT5G47950 | 26.077 | 441 | 262 | 17 | 11 | 440 | 13 | 400 | 4.26e-25 | 107 |
MS.gene067826.t1 | AT5G23940 | 27.027 | 407 | 254 | 16 | 59 | 450 | 65 | 443 | 8.21e-25 | 107 |
MS.gene067826.t1 | AT3G29590 | 26.619 | 417 | 246 | 16 | 66 | 457 | 68 | 449 | 8.54e-25 | 107 |
MS.gene067826.t1 | AT1G24420 | 24.580 | 476 | 296 | 15 | 3 | 464 | 4 | 430 | 1.39e-24 | 106 |
MS.gene067826.t1 | AT1G24420 | 24.580 | 476 | 296 | 15 | 3 | 464 | 4 | 430 | 1.39e-24 | 106 |
MS.gene067826.t1 | AT1G31490 | 24.939 | 413 | 272 | 13 | 1 | 407 | 3 | 383 | 2.29e-24 | 105 |
MS.gene067826.t1 | AT5G61160 | 24.153 | 472 | 308 | 15 | 4 | 454 | 6 | 448 | 3.74e-24 | 105 |
MS.gene067826.t1 | AT3G29680 | 24.160 | 476 | 308 | 15 | 4 | 458 | 6 | 449 | 4.24e-24 | 104 |
MS.gene067826.t1 | AT5G07870 | 27.885 | 416 | 264 | 17 | 59 | 462 | 72 | 463 | 1.27e-23 | 103 |
MS.gene067826.t1 | AT5G23970 | 23.937 | 447 | 287 | 18 | 2 | 440 | 1 | 402 | 1.80e-23 | 102 |
MS.gene067826.t1 | AT4G31910 | 24.734 | 376 | 238 | 12 | 59 | 412 | 64 | 416 | 2.13e-23 | 102 |
MS.gene067826.t1 | AT5G07860 | 27.792 | 403 | 244 | 17 | 59 | 449 | 72 | 439 | 2.60e-23 | 102 |
MS.gene067826.t1 | AT3G50280 | 26.893 | 383 | 217 | 20 | 59 | 417 | 59 | 402 | 1.12e-22 | 100 |
MS.gene067826.t1 | AT1G65450 | 24.762 | 315 | 197 | 9 | 152 | 456 | 1 | 285 | 1.82e-22 | 97.4 |
MS.gene067826.t1 | AT3G50270 | 27.208 | 419 | 242 | 23 | 21 | 417 | 30 | 407 | 2.83e-22 | 99.4 |
MS.gene067826.t1 | AT5G42830 | 25.307 | 407 | 257 | 18 | 59 | 449 | 64 | 439 | 4.04e-22 | 99.0 |
MS.gene067826.t1 | AT5G07850 | 24.105 | 419 | 270 | 18 | 59 | 462 | 70 | 455 | 1.39e-21 | 97.4 |
MS.gene067826.t1 | AT5G39090 | 25.157 | 477 | 296 | 20 | 6 | 457 | 8 | 448 | 7.44e-21 | 95.1 |
MS.gene067826.t1 | AT5G67150 | 27.273 | 429 | 250 | 24 | 42 | 448 | 47 | 435 | 1.34e-20 | 94.4 |
MS.gene067826.t1 | AT1G03940 | 24.236 | 491 | 297 | 21 | 6 | 457 | 11 | 465 | 1.13e-19 | 91.7 |
MS.gene067826.t1 | AT5G47980 | 22.458 | 472 | 320 | 16 | 2 | 464 | 3 | 437 | 1.32e-19 | 91.3 |
MS.gene067826.t1 | AT4G15400 | 24.262 | 474 | 301 | 19 | 2 | 464 | 3 | 429 | 3.87e-18 | 87.0 |
MS.gene067826.t1 | AT3G50300 | 25.635 | 433 | 242 | 22 | 59 | 459 | 59 | 443 | 3.09e-17 | 84.3 |
MS.gene067826.t1 | AT1G03495 | 26.023 | 342 | 210 | 14 | 6 | 318 | 11 | 338 | 6.18e-17 | 82.4 |
MS.gene067826.t1 | AT3G50280 | 25.260 | 289 | 180 | 13 | 136 | 417 | 13 | 272 | 5.74e-16 | 79.0 |
MS.gene067826.t1 | AT3G50290 | 25.214 | 234 | 152 | 9 | 136 | 362 | 19 | 236 | 2.13e-12 | 67.8 |
MS.gene067826.t1 | AT3G23840 | 25.084 | 299 | 189 | 10 | 89 | 380 | 93 | 363 | 8.42e-11 | 64.3 |
Find 88 sgRNAs with CRISPR-Local
Find 120 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTTTGCCTAAGAATTATTT+TGG | 0.081602 | 7.1:+19287611 | MS.gene067826:CDS |
CCGTTTAATGAGACCGATTT+TGG | 0.124040 | 7.1:+19287887 | MS.gene067826:CDS |
GCTAAAAGAAATGGACAATT+TGG | 0.222470 | 7.1:+19287824 | MS.gene067826:CDS |
GATATCACTTTAAAAGATTT+AGG | 0.281321 | 7.1:+19287011 | MS.gene067826:CDS |
CTGGGTCGTTCTGTTCTTGA+TGG | 0.283808 | 7.1:+19287167 | MS.gene067826:CDS |
AAGTGCGCTTTGAAGGAAAT+TGG | 0.321861 | 7.1:+19287534 | MS.gene067826:CDS |
CTATGTATGAACGGTGGATT+TGG | 0.326559 | 7.1:-19286713 | None:intergenic |
CCTTGTGGGTCACTCACTCT+TGG | 0.327948 | 7.1:+19287137 | MS.gene067826:CDS |
TTCCCAACCACATAACAAAA+AGG | 0.329036 | 7.1:-19287692 | None:intergenic |
ACTCACTCTTGGTCTTGCTC+TGG | 0.329835 | 7.1:+19287148 | MS.gene067826:CDS |
TAAAGTTGGTATCCATGGTT+AGG | 0.353132 | 7.1:-19286801 | None:intergenic |
CAACTTCATTGCAACAATAA+AGG | 0.357124 | 7.1:+19286963 | MS.gene067826:CDS |
AGAAGGATATGAATTTGTTA+AGG | 0.368085 | 7.1:+19287783 | MS.gene067826:CDS |
GCATTCCCAAAATAATTCTT+AGG | 0.370343 | 7.1:-19287617 | None:intergenic |
AGGTTATTAGTTGTTACATA+TGG | 0.371511 | 7.1:+19287498 | MS.gene067826:CDS |
AACAAAGGAACATCTTCAAC+TGG | 0.377562 | 7.1:-19287092 | None:intergenic |
ACCAAGGTTGTTAACCTTGT+TGG | 0.383376 | 7.1:-19287563 | None:intergenic |
TATATTCTTGATGAAGCTAA+TGG | 0.388002 | 7.1:+19287971 | MS.gene067826:CDS |
CAGCCAACAACATACAAATT+CGG | 0.390158 | 7.1:-19287854 | None:intergenic |
AGTTGAAGATGTTCCTTTGT+TGG | 0.391503 | 7.1:+19287094 | MS.gene067826:CDS |
AGTGAGGGAAGCTATTAAAA+AGG | 0.397885 | 7.1:+19287715 | MS.gene067826:CDS |
CCTGGTATTGTTAATTCTGA+TGG | 0.403024 | 7.1:+19287935 | MS.gene067826:CDS |
CTGGTAGTTTCATTAGCTCA+TGG | 0.408004 | 7.1:+19287198 | MS.gene067826:CDS |
AACAAAGTTCTATCATGAAA+TGG | 0.413409 | 7.1:-19287263 | None:intergenic |
CCTTGGTTAATTGTAGAAAC+AGG | 0.414948 | 7.1:+19287579 | MS.gene067826:CDS |
TTGACACTATCATCACAGTT+TGG | 0.415059 | 7.1:-19288086 | None:intergenic |
GAAGGATATGAATTTGTTAA+GGG | 0.417826 | 7.1:+19287784 | MS.gene067826:CDS |
GTTCTTGATGGTTCTTCTGC+TGG | 0.417833 | 7.1:+19287179 | MS.gene067826:CDS |
AAACCTGATTGTATGGTTCC+TGG | 0.419876 | 7.1:+19287917 | MS.gene067826:CDS |
ATCATGAAATGGAATCATAC+TGG | 0.425406 | 7.1:-19287252 | None:intergenic |
ATAGTAGTGAGTGAGTGTTT+TGG | 0.427197 | 7.1:-19286892 | None:intergenic |
ACTCACTACTATCCCTTTGC+AGG | 0.430831 | 7.1:+19286903 | MS.gene067826:CDS |
CCAAAATCGGTCTCATTAAA+CGG | 0.433375 | 7.1:-19287887 | None:intergenic |
AGTTTACCAAGTTTCCTTGT+GGG | 0.443352 | 7.1:+19287123 | MS.gene067826:CDS |
CTCACTCTTGGTCTTGCTCT+GGG | 0.445044 | 7.1:+19287149 | MS.gene067826:CDS |
ATTGTTAATTCTGATGGTAT+TGG | 0.447032 | 7.1:+19287941 | MS.gene067826:CDS |
CGAATTTGTATGTTGTTGGC+TGG | 0.452519 | 7.1:+19287855 | MS.gene067826:CDS |
GACCCGAATTTGTATGTTGT+TGG | 0.455084 | 7.1:+19287851 | MS.gene067826:CDS |
GTTTGTAAAGTGCGCTTTGA+AGG | 0.462639 | 7.1:+19287527 | MS.gene067826:CDS |
TGTTTGTGAAGAGGTAAAGT+TGG | 0.465289 | 7.1:-19286815 | None:intergenic |
TAATTCTGATGGTATTGGTA+AGG | 0.485819 | 7.1:+19287946 | MS.gene067826:CDS |
AGCCAACAACATACAAATTC+GGG | 0.489178 | 7.1:-19287853 | None:intergenic |
CCAAAATAATTCTTAGGCAA+AGG | 0.492931 | 7.1:-19287611 | None:intergenic |
GGTGAATTTCAACATGGTAG+TGG | 0.502907 | 7.1:-19287402 | None:intergenic |
TGCAATGAAGTTGTAGTAAG+TGG | 0.507183 | 7.1:-19286953 | None:intergenic |
CAGTTTACCAAGTTTCCTTG+TGG | 0.509783 | 7.1:+19287122 | MS.gene067826:CDS |
TTATTAGTTGTTACATATGG+AGG | 0.520920 | 7.1:+19287501 | MS.gene067826:CDS |
CCTTTGCAGGTAGATTAAGC+TGG | 0.522403 | 7.1:+19286916 | MS.gene067826:CDS |
ACCAACAAGGTTAACAACCT+TGG | 0.525311 | 7.1:+19287562 | MS.gene067826:CDS |
TGGTAGTTTCATTAGCTCAT+GGG | 0.526316 | 7.1:+19287199 | MS.gene067826:CDS |
CCAGCTTAATCTACCTGCAA+AGG | 0.526320 | 7.1:-19286916 | None:intergenic |
GTGGTTGGTGTTGTCTCTGA+AGG | 0.528212 | 7.1:-19286741 | None:intergenic |
CCATCAGAATTAACAATACC+AGG | 0.531351 | 7.1:-19287935 | None:intergenic |
GAGTGACCCACAAGGAAACT+TGG | 0.531384 | 7.1:-19287129 | None:intergenic |
AAGAGATGAGTGATGATGAA+TGG | 0.535532 | 7.1:-19286842 | None:intergenic |
AGAGGTAAAGTTGGTATCCA+TGG | 0.536783 | 7.1:-19286806 | None:intergenic |
CAGCTTAATCTACCTGCAAA+GGG | 0.537755 | 7.1:-19286915 | None:intergenic |
TCATGGGCTAAACTTGCTAA+AGG | 0.538185 | 7.1:+19287215 | MS.gene067826:CDS |
ATACCAGGAACCATACAATC+AGG | 0.550344 | 7.1:-19287920 | None:intergenic |
AAATAATTCTTAGGCAAAGG+TGG | 0.552771 | 7.1:-19287608 | None:intergenic |
CTTGATGAAGCTAATGGCGA+TGG | 0.560804 | 7.1:+19287977 | MS.gene067826:CDS |
AGGTTGTTAACCTTGTTGGT+TGG | 0.562457 | 7.1:-19287559 | None:intergenic |
AAAGTTGGTATCCATGGTTA+GGG | 0.563700 | 7.1:-19286800 | None:intergenic |
AACATGGTAGTGGCAAAGAG+TGG | 0.563812 | 7.1:-19287392 | None:intergenic |
GAGCTTGAGTTGATCACAGA+GGG | 0.580856 | 7.1:-19286778 | None:intergenic |
GAAAGAGAGAGTGTGGTGGT+TGG | 0.587131 | 7.1:-19286756 | None:intergenic |
ACATGGTAGTGGCAAAGAGT+GGG | 0.588001 | 7.1:-19287391 | None:intergenic |
ACAGAGGGAAAGAGAGAGTG+TGG | 0.591568 | 7.1:-19286763 | None:intergenic |
TGATTATGTAGCAAATCAGA+AGG | 0.592162 | 7.1:+19287766 | MS.gene067826:CDS |
GTTATGTGGTTGGGAAAGTG+AGG | 0.594320 | 7.1:+19287699 | MS.gene067826:CDS |
CAACTCAAGCTCCCTAACCA+TGG | 0.599984 | 7.1:+19286789 | MS.gene067826:CDS |
AAAAGAAATGGACAATTTGG+TGG | 0.606770 | 7.1:+19287827 | MS.gene067826:CDS |
CCTGTTTCTACAATTAACCA+AGG | 0.607399 | 7.1:-19287579 | None:intergenic |
GAAAACGTGGTGGTAAATGA+AGG | 0.612694 | 7.1:-19287298 | None:intergenic |
GAACAAGTTTGTGTCACCGT+AGG | 0.630705 | 7.1:-19287647 | None:intergenic |
GTAAACTGAACAACCAACAA+AGG | 0.642328 | 7.1:-19287107 | None:intergenic |
AGCCAACACCAATGAAAACA+AGG | 0.649428 | 7.1:+19287454 | MS.gene067826:CDS |
GAAATTGGAACCAACCAACA+AGG | 0.652154 | 7.1:+19287549 | MS.gene067826:CDS |
ACAAAGGAACATCTTCAACT+GGG | 0.664068 | 7.1:-19287091 | None:intergenic |
TTATGTGGTTGGGAAAGTGA+GGG | 0.670881 | 7.1:+19287700 | MS.gene067826:CDS |
CCAAGAGTGAGTGACCCACA+AGG | 0.679354 | 7.1:-19287137 | None:intergenic |
AAGGTGTAACTATGTATGAA+CGG | 0.693375 | 7.1:-19286722 | None:intergenic |
ACCAATGAAAACAAGGTACG+AGG | 0.701204 | 7.1:+19287461 | MS.gene067826:CDS |
GAGGGAAAGAGAGAGTGTGG+TGG | 0.702222 | 7.1:-19286760 | None:intergenic |
AACTCATGATGATGAAAACG+TGG | 0.716513 | 7.1:-19287311 | None:intergenic |
GTGTAACTATGTATGAACGG+TGG | 0.717757 | 7.1:-19286719 | None:intergenic |
TCATGATGATGAAAACGTGG+TGG | 0.758242 | 7.1:-19287308 | None:intergenic |
GGAGCTTGAGTTGATCACAG+AGG | 0.762986 | 7.1:-19286779 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATAATTTTGCTAAAAGAAA+TGG | + | chr7.1:19287815-19287834 | MS.gene067826:CDS | 15.0% |
!!! | AAGTTTTTCAACTTGTTTTT+TGG | - | chr7.1:19287426-19287445 | None:intergenic | 20.0% |
!!! | GATATCACTTTAAAAGATTT+AGG | + | chr7.1:19287011-19287030 | MS.gene067826:CDS | 20.0% |
!!! | TAATTTTTGGAACAAGTTTT+TGG | - | chr7.1:19287061-19287080 | None:intergenic | 20.0% |
! | AACAAAGTTCTATCATGAAA+TGG | - | chr7.1:19287266-19287285 | None:intergenic | 25.0% |
! | AGGTTATTAGTTGTTACATA+TGG | + | chr7.1:19287498-19287517 | MS.gene067826:CDS | 25.0% |
! | ATTGTTAATTCTGATGGTAT+TGG | + | chr7.1:19287941-19287960 | MS.gene067826:CDS | 25.0% |
! | TATATTCTTGATGAAGCTAA+TGG | + | chr7.1:19287971-19287990 | MS.gene067826:CDS | 25.0% |
! | TTATTAGTTGTTACATATGG+AGG | + | chr7.1:19287501-19287520 | MS.gene067826:CDS | 25.0% |
!! | ATTACTACTATTTTCCCAAA+GGG | - | chr7.1:19287348-19287367 | None:intergenic | 25.0% |
!! | CTTTGCCTAAGAATTATTTT+GGG | + | chr7.1:19287612-19287631 | MS.gene067826:CDS | 25.0% |
!! | TATTACTACTATTTTCCCAA+AGG | - | chr7.1:19287349-19287368 | None:intergenic | 25.0% |
!!! | AGAAGGATATGAATTTGTTA+AGG | + | chr7.1:19287783-19287802 | MS.gene067826:CDS | 25.0% |
!!! | GAAGGATATGAATTTGTTAA+GGG | + | chr7.1:19287784-19287803 | MS.gene067826:CDS | 25.0% |
!!! | TTTTAAAGTGATATCACATG+TGG | - | chr7.1:19287006-19287025 | None:intergenic | 25.0% |
!!! | TTTTTTGGTGAATTTCAACA+TGG | - | chr7.1:19287411-19287430 | None:intergenic | 25.0% |
AAAAGAAATGGACAATTTGG+TGG | + | chr7.1:19287827-19287846 | MS.gene067826:CDS | 30.0% | |
AAATAATTCTTAGGCAAAGG+TGG | - | chr7.1:19287611-19287630 | None:intergenic | 30.0% | |
AAGGTGTAACTATGTATGAA+CGG | - | chr7.1:19286725-19286744 | None:intergenic | 30.0% | |
ATCATGAAATGGAATCATAC+TGG | - | chr7.1:19287255-19287274 | None:intergenic | 30.0% | |
CAACTTCATTGCAACAATAA+AGG | + | chr7.1:19286963-19286982 | MS.gene067826:CDS | 30.0% | |
CCAAAATAATTCTTAGGCAA+AGG | - | chr7.1:19287614-19287633 | None:intergenic | 30.0% | |
GCATTCCCAAAATAATTCTT+AGG | - | chr7.1:19287620-19287639 | None:intergenic | 30.0% | |
GCTAAAAGAAATGGACAATT+TGG | + | chr7.1:19287824-19287843 | MS.gene067826:CDS | 30.0% | |
TGATTATGTAGCAAATCAGA+AGG | + | chr7.1:19287766-19287785 | MS.gene067826:CDS | 30.0% | |
! | CCTTTGCCTAAGAATTATTT+TGG | + | chr7.1:19287611-19287630 | MS.gene067826:CDS | 30.0% |
! | GGGACATCATAGTTAATTTT+TGG | - | chr7.1:19287074-19287093 | None:intergenic | 30.0% |
! | TTACTACTATTTTCCCAAAG+GGG | - | chr7.1:19287347-19287366 | None:intergenic | 30.0% |
!! | AATGGTTTTTGTTTGTGAAG+AGG | - | chr7.1:19286827-19286846 | None:intergenic | 30.0% |
!! | GAAGTTGTTTTATGAGGATA+TGG | + | chr7.1:19288048-19288067 | MS.gene067826:CDS | 30.0% |
!! | GTTGAAGAAGTTGTTTTATG+AGG | + | chr7.1:19288042-19288061 | MS.gene067826:CDS | 30.0% |
!! | TAATTCTGATGGTATTGGTA+AGG | + | chr7.1:19287946-19287965 | MS.gene067826:CDS | 30.0% |
AACAAAGGAACATCTTCAAC+TGG | - | chr7.1:19287095-19287114 | None:intergenic | 35.0% | |
ACAAAGGAACATCTTCAACT+GGG | - | chr7.1:19287094-19287113 | None:intergenic | 35.0% | |
AGCCAACAACATACAAATTC+GGG | - | chr7.1:19287856-19287875 | None:intergenic | 35.0% | |
AGTGAGGGAAGCTATTAAAA+AGG | + | chr7.1:19287715-19287734 | MS.gene067826:CDS | 35.0% | |
AGTTGAAGATGTTCCTTTGT+TGG | + | chr7.1:19287094-19287113 | MS.gene067826:CDS | 35.0% | |
AGTTTACCAAGTTTCCTTGT+GGG | + | chr7.1:19287123-19287142 | MS.gene067826:CDS | 35.0% | |
CAGCCAACAACATACAAATT+CGG | - | chr7.1:19287857-19287876 | None:intergenic | 35.0% | |
CCAAAATCGGTCTCATTAAA+CGG | - | chr7.1:19287890-19287909 | None:intergenic | 35.0% | |
CCATCAGAATTAACAATACC+AGG | - | chr7.1:19287938-19287957 | None:intergenic | 35.0% | |
CCTGGTATTGTTAATTCTGA+TGG | + | chr7.1:19287935-19287954 | MS.gene067826:CDS | 35.0% | |
CCTTGGTTAATTGTAGAAAC+AGG | + | chr7.1:19287579-19287598 | MS.gene067826:CDS | 35.0% | |
GTAAACTGAACAACCAACAA+AGG | - | chr7.1:19287110-19287129 | None:intergenic | 35.0% | |
TGCAATGAAGTTGTAGTAAG+TGG | - | chr7.1:19286956-19286975 | None:intergenic | 35.0% | |
TGGTAGTTTCATTAGCTCAT+GGG | + | chr7.1:19287199-19287218 | MS.gene067826:CDS | 35.0% | |
TGTTTGTGAAGAGGTAAAGT+TGG | - | chr7.1:19286818-19286837 | None:intergenic | 35.0% | |
TTCCCAACCACATAACAAAA+AGG | - | chr7.1:19287695-19287714 | None:intergenic | 35.0% | |
! | AACTCATGATGATGAAAACG+TGG | - | chr7.1:19287314-19287333 | None:intergenic | 35.0% |
! | AAGAGATGAGTGATGATGAA+TGG | - | chr7.1:19286845-19286864 | None:intergenic | 35.0% |
! | ATAGTAGTGAGTGAGTGTTT+TGG | - | chr7.1:19286895-19286914 | None:intergenic | 35.0% |
!! | AAAGTTGGTATCCATGGTTA+GGG | - | chr7.1:19286803-19286822 | None:intergenic | 35.0% |
!! | AAGCCTTTTTGTTATGTGGT+TGG | + | chr7.1:19287689-19287708 | MS.gene067826:CDS | 35.0% |
!! | AGCCTTTTTGTTATGTGGTT+GGG | + | chr7.1:19287690-19287709 | MS.gene067826:CDS | 35.0% |
!! | AGTTGTAGTAAGTGGTTTTG+TGG | - | chr7.1:19286948-19286967 | None:intergenic | 35.0% |
!! | CCTGTTTCTACAATTAACCA+AGG | - | chr7.1:19287582-19287601 | None:intergenic | 35.0% |
!! | CGTTTAATGAGACCGATTTT+GGG | + | chr7.1:19287888-19287907 | MS.gene067826:CDS | 35.0% |
!! | GAACAAGCCTTTTTGTTATG+TGG | + | chr7.1:19287685-19287704 | MS.gene067826:CDS | 35.0% |
!! | TAAAGTTGGTATCCATGGTT+AGG | - | chr7.1:19286804-19286823 | None:intergenic | 35.0% |
!!! | ACGAGGTTATACTAGTTTTG+AGG | + | chr7.1:19287478-19287497 | MS.gene067826:CDS | 35.0% |
!!! | TACCTTGTTTTCATTGGTGT+TGG | - | chr7.1:19287459-19287478 | None:intergenic | 35.0% |
AAACCTGATTGTATGGTTCC+TGG | + | chr7.1:19287917-19287936 | MS.gene067826:CDS | 40.0% | |
ACCAACAAGGTTAACAACCT+TGG | + | chr7.1:19287562-19287581 | MS.gene067826:CDS | 40.0% | |
ACCAAGGTTGTTAACCTTGT+TGG | - | chr7.1:19287566-19287585 | None:intergenic | 40.0% | |
ACCAATGAAAACAAGGTACG+AGG | + | chr7.1:19287461-19287480 | MS.gene067826:CDS | 40.0% | |
AGCCAACACCAATGAAAACA+AGG | + | chr7.1:19287454-19287473 | MS.gene067826:CDS | 40.0% | |
AGGTTGTTAACCTTGTTGGT+TGG | - | chr7.1:19287562-19287581 | None:intergenic | 40.0% | |
ATACCAGGAACCATACAATC+AGG | - | chr7.1:19287923-19287942 | None:intergenic | 40.0% | |
CAGCTTAATCTACCTGCAAA+GGG | - | chr7.1:19286918-19286937 | None:intergenic | 40.0% | |
CAGTTTACCAAGTTTCCTTG+TGG | + | chr7.1:19287122-19287141 | MS.gene067826:CDS | 40.0% | |
CGAATTTGTATGTTGTTGGC+TGG | + | chr7.1:19287855-19287874 | MS.gene067826:CDS | 40.0% | |
CTGGTAGTTTCATTAGCTCA+TGG | + | chr7.1:19287198-19287217 | MS.gene067826:CDS | 40.0% | |
GAAAACGTGGTGGTAAATGA+AGG | - | chr7.1:19287301-19287320 | None:intergenic | 40.0% | |
GAAATTGGAACCAACCAACA+AGG | + | chr7.1:19287549-19287568 | MS.gene067826:CDS | 40.0% | |
GACCCGAATTTGTATGTTGT+TGG | + | chr7.1:19287851-19287870 | MS.gene067826:CDS | 40.0% | |
GGTGAATTTCAACATGGTAG+TGG | - | chr7.1:19287405-19287424 | None:intergenic | 40.0% | |
GTGTAACTATGTATGAACGG+TGG | - | chr7.1:19286722-19286741 | None:intergenic | 40.0% | |
GTTTGTAAAGTGCGCTTTGA+AGG | + | chr7.1:19287527-19287546 | MS.gene067826:CDS | 40.0% | |
TTATGTGGTTGGGAAAGTGA+GGG | + | chr7.1:19287700-19287719 | MS.gene067826:CDS | 40.0% | |
! | CTATGTATGAACGGTGGATT+TGG | - | chr7.1:19286716-19286735 | None:intergenic | 40.0% |
! | TCATGATGATGAAAACGTGG+TGG | - | chr7.1:19287311-19287330 | None:intergenic | 40.0% |
! | TGGGAATGCAACTTTTCCTA+CGG | + | chr7.1:19287631-19287650 | MS.gene067826:CDS | 40.0% |
!! | AAGTGCGCTTTGAAGGAAAT+TGG | + | chr7.1:19287534-19287553 | MS.gene067826:CDS | 40.0% |
!! | AGAGGTAAAGTTGGTATCCA+TGG | - | chr7.1:19286809-19286828 | None:intergenic | 40.0% |
!! | CCGTTTAATGAGACCGATTT+TGG | + | chr7.1:19287887-19287906 | MS.gene067826:CDS | 40.0% |
!! | TAATGAGACCGATTTTGGGT+GGG | + | chr7.1:19287892-19287911 | MS.gene067826:CDS | 40.0% |
!! | TCATGGGCTAAACTTGCTAA+AGG | + | chr7.1:19287215-19287234 | MS.gene067826:CDS | 40.0% |
!! | TTAATGAGACCGATTTTGGG+TGG | + | chr7.1:19287891-19287910 | MS.gene067826:CDS | 40.0% |
!!! | ACCTCGTACCTTGTTTTCAT+TGG | - | chr7.1:19287465-19287484 | None:intergenic | 40.0% |
ACTCACTACTATCCCTTTGC+AGG | + | chr7.1:19286903-19286922 | MS.gene067826:CDS | 45.0% | |
CCAGCTTAATCTACCTGCAA+AGG | - | chr7.1:19286919-19286938 | None:intergenic | 45.0% | |
CCTTTGCAGGTAGATTAAGC+TGG | + | chr7.1:19286916-19286935 | MS.gene067826:CDS | 45.0% | |
CTTGATGAAGCTAATGGCGA+TGG | + | chr7.1:19287977-19287996 | MS.gene067826:CDS | 45.0% | |
GAACAAGTTTGTGTCACCGT+AGG | - | chr7.1:19287650-19287669 | None:intergenic | 45.0% | |
GTTATGTGGTTGGGAAAGTG+AGG | + | chr7.1:19287699-19287718 | MS.gene067826:CDS | 45.0% | |
! | CTACTATTTTCCCAAAGGGG+TGG | - | chr7.1:19287344-19287363 | None:intergenic | 45.0% |
! | GTTCTTGATGGTTCTTCTGC+TGG | + | chr7.1:19287179-19287198 | MS.gene067826:CDS | 45.0% |
!! | AACATGGTAGTGGCAAAGAG+TGG | - | chr7.1:19287395-19287414 | None:intergenic | 45.0% |
!! | AATGAGACCGATTTTGGGTG+GGG | + | chr7.1:19287893-19287912 | MS.gene067826:CDS | 45.0% |
!! | ACATGGTAGTGGCAAAGAGT+GGG | - | chr7.1:19287394-19287413 | None:intergenic | 45.0% |
!! | GAGCTTGAGTTGATCACAGA+GGG | - | chr7.1:19286781-19286800 | None:intergenic | 45.0% |
!!! | AGTGAGTGTTTTGGAGAGAG+AGG | - | chr7.1:19286886-19286905 | None:intergenic | 45.0% |
ACAGAGGGAAAGAGAGAGTG+TGG | - | chr7.1:19286766-19286785 | None:intergenic | 50.0% | |
AGGTTTCCCCCACCCAAAAT+CGG | - | chr7.1:19287903-19287922 | None:intergenic | 50.0% | |
CAACTCAAGCTCCCTAACCA+TGG | + | chr7.1:19286789-19286808 | MS.gene067826:CDS | 50.0% | |
CTGGGTCGTTCTGTTCTTGA+TGG | + | chr7.1:19287167-19287186 | MS.gene067826:CDS | 50.0% | |
GAGTGACCCACAAGGAAACT+TGG | - | chr7.1:19287132-19287151 | None:intergenic | 50.0% | |
GTGGGGGAAACCTGATTGTA+TGG | + | chr7.1:19287910-19287929 | MS.gene067826:CDS | 50.0% | |
! | AGTTTTCTCCACCACCCCTT+TGG | + | chr7.1:19287330-19287349 | MS.gene067826:CDS | 50.0% |
! | CTATTTTCCCAAAGGGGTGG+TGG | - | chr7.1:19287341-19287360 | None:intergenic | 50.0% |
! | GAAAGAGAGAGTGTGGTGGT+TGG | - | chr7.1:19286759-19286778 | None:intergenic | 50.0% |
! | GTTTTCTCCACCACCCCTTT+GGG | + | chr7.1:19287331-19287350 | MS.gene067826:CDS | 50.0% |
!! | ACTCACTCTTGGTCTTGCTC+TGG | + | chr7.1:19287148-19287167 | MS.gene067826:CDS | 50.0% |
!! | ATGAGACCGATTTTGGGTGG+GGG | + | chr7.1:19287894-19287913 | MS.gene067826:CDS | 50.0% |
!! | CTCACTCTTGGTCTTGCTCT+GGG | + | chr7.1:19287149-19287168 | MS.gene067826:CDS | 50.0% |
!! | GGAGCTTGAGTTGATCACAG+AGG | - | chr7.1:19286782-19286801 | None:intergenic | 50.0% |
!! | GTGGTTGGTGTTGTCTCTGA+AGG | - | chr7.1:19286744-19286763 | None:intergenic | 50.0% |
CCAAGAGTGAGTGACCCACA+AGG | - | chr7.1:19287140-19287159 | None:intergenic | 55.0% | |
CCTTGTGGGTCACTCACTCT+TGG | + | chr7.1:19287137-19287156 | MS.gene067826:CDS | 55.0% | |
! | GAGGGAAAGAGAGAGTGTGG+TGG | - | chr7.1:19286763-19286782 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 19286702 | 19288096 | 19286702 | ID=MS.gene067826 |
chr7.1 | mRNA | 19286702 | 19288096 | 19286702 | ID=MS.gene067826.t1;Parent=MS.gene067826 |
chr7.1 | exon | 19286702 | 19288096 | 19286702 | ID=MS.gene067826.t1.exon1;Parent=MS.gene067826.t1 |
chr7.1 | CDS | 19286702 | 19288096 | 19286702 | ID=cds.MS.gene067826.t1;Parent=MS.gene067826.t1 |
Gene Sequence |
Protein sequence |