Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052616.t1 | XP_013460958.1 | 96.9 | 652 | 14 | 2 | 1 | 646 | 1 | 652 | 0.00E+00 | 1147.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052616.t1 | G8A2H1 | 96.9 | 652 | 14 | 2 | 1 | 646 | 1 | 652 | 0.0e+00 | 1147.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051279 | MS.gene052616 | 0.81698 | 4.18E-52 | -1.69E-46 |
| MS.gene052582 | MS.gene052616 | 0.801291 | 9.65E-49 | -1.69E-46 |
| MS.gene052616 | MS.gene060919 | 0.801453 | 8.94E-49 | -1.69E-46 |
| MS.gene052616 | MS.gene064422 | 0.804001 | 2.66E-49 | -1.69E-46 |
| MS.gene052616 | MS.gene065667 | 0.801047 | 1.08E-48 | -1.69E-46 |
| MS.gene052616 | MS.gene066335 | 0.814484 | 1.51E-51 | -1.69E-46 |
| MS.gene052616 | MS.gene067826 | 0.800984 | 1.12E-48 | -1.69E-46 |
| MS.gene052616 | MS.gene28652 | 0.802891 | 4.52E-49 | -1.69E-46 |
| MS.gene052616 | MS.gene30515 | 0.804584 | 2.01E-49 | -1.69E-46 |
| MS.gene052616 | MS.gene30930 | 0.8033 | 3.72E-49 | -1.69E-46 |
| MS.gene052616 | MS.gene36496 | 0.805239 | 1.47E-49 | -1.69E-46 |
| MS.gene052616 | MS.gene38976 | 0.806761 | 7.03E-50 | -1.69E-46 |
| MS.gene052616 | MS.gene53064 | 0.8152 | 1.04E-51 | -1.69E-46 |
| MS.gene052616 | MS.gene53191 | 0.819069 | 1.41E-52 | -1.69E-46 |
| MS.gene052616 | MS.gene59012 | 0.808272 | 3.36E-50 | -1.69E-46 |
| MS.gene052616 | MS.gene64249 | 0.803539 | 3.32E-49 | -1.69E-46 |
| MS.gene052616 | MS.gene71534 | 0.816555 | 5.21E-52 | -1.69E-46 |
| MS.gene052616 | MS.gene71704 | 0.803354 | 3.63E-49 | -1.69E-46 |
| MS.gene052616 | MS.gene74758 | 0.809982 | 1.45E-50 | -1.69E-46 |
| MS.gene052616 | MS.gene76153 | 0.811986 | 5.32E-51 | -1.69E-46 |
| MS.gene052616 | MS.gene78775 | 0.806093 | 9.73E-50 | -1.69E-46 |
| MS.gene052616 | MS.gene97490 | 0.83979 | 1.28E-57 | -1.69E-46 |
| MS.gene052616 | MS.gene97784 | 0.801847 | 7.42E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052616.t1 | MTR_3g075240 | 96.933 | 652 | 14 | 2 | 1 | 646 | 1 | 652 | 0.0 | 1276 |
| MS.gene052616.t1 | MTR_3g075240 | 96.053 | 532 | 15 | 2 | 1 | 526 | 1 | 532 | 0.0 | 1036 |
| MS.gene052616.t1 | MTR_3g075240 | 95.833 | 384 | 10 | 2 | 1 | 378 | 1 | 384 | 0.0 | 744 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052616.t1 | AT5G63200 | 65.127 | 628 | 212 | 3 | 18 | 644 | 24 | 645 | 0.0 | 788 |
| MS.gene052616.t1 | AT5G63200 | 63.217 | 628 | 208 | 4 | 18 | 644 | 24 | 629 | 0.0 | 748 |
Find 149 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCTATGCATTTGCTATTAC+TGG | 0.169530 | 3.1:-61916128 | MS.gene052616:CDS |
| AGGTAAATTGTTGAACAAAT+TGG | 0.186698 | 3.1:-61918012 | MS.gene052616:CDS |
| ATGGAAAATCAGCCCATATT+TGG | 0.232379 | 3.1:-61916160 | MS.gene052616:CDS |
| AGGCAAGATTTGCCCAAATA+TGG | 0.241338 | 3.1:+61916147 | None:intergenic |
| GGTAAATTGTTGAACAAATT+GGG | 0.242481 | 3.1:-61918011 | MS.gene052616:CDS |
| TTCGTTGCTATTGGTGTCTT+TGG | 0.243928 | 3.1:+61918040 | None:intergenic |
| ACATGCTATACTATCCAATA+TGG | 0.254925 | 3.1:-61914873 | MS.gene052616:CDS |
| TTTGAGGTTGGTTTAATCTT+TGG | 0.257741 | 3.1:+61917543 | None:intergenic |
| CTGATGAACTTTCTATTATC+AGG | 0.262072 | 3.1:+61917264 | None:intergenic |
| ATACAAACGGGCTTTGTCTT+TGG | 0.278428 | 3.1:-61914912 | MS.gene052616:CDS |
| TCTTCGTCGTCATCGGCTTC+AGG | 0.284486 | 3.1:+61919199 | None:intergenic |
| TGAATCACCATCTCTTATTA+TGG | 0.288105 | 3.1:+61915630 | None:intergenic |
| GAGGAAACAATTCGCTGTTT+TGG | 0.288498 | 3.1:-61919242 | MS.gene052616:CDS |
| AATTGCCTTCAGTGGAGATT+TGG | 0.290767 | 3.1:-61916513 | MS.gene052616:intron |
| ACCTTCAGCTTCGTTGCTAT+TGG | 0.292512 | 3.1:+61918031 | None:intergenic |
| AGCCAAGTCTAACTTGATTA+AGG | 0.308789 | 3.1:-61914663 | MS.gene052616:CDS |
| TTGTTGCCAGGCAGCAAAAC+TGG | 0.318733 | 3.1:-61915764 | MS.gene052616:intron |
| TGCTCCTGCATTCAACAATC+TGG | 0.324831 | 3.1:-61914771 | MS.gene052616:CDS |
| TATGATTGCCTTGGTAATCT+TGG | 0.327367 | 3.1:-61916917 | MS.gene052616:CDS |
| AATCAACGCAATCGGATATC+AGG | 0.341521 | 3.1:-61917178 | MS.gene052616:CDS |
| GCCTTCACAGTCTTTGTGCC+AGG | 0.342048 | 3.1:-61915235 | MS.gene052616:CDS |
| CCATTTGAACTTACATTTGA+AGG | 0.365538 | 3.1:+61916885 | None:intergenic |
| AGTGAATTGCTTTCGTCTGC+TGG | 0.367442 | 3.1:-61915667 | MS.gene052616:CDS |
| AGCAATAAATTACCTGCTTT+AGG | 0.373226 | 3.1:+61915479 | None:intergenic |
| GCAAGCCCGGCCCAAGCTAT+TGG | 0.379294 | 3.1:+61915592 | None:intergenic |
| AGAATCCGTCTTGCTAGGTT+TGG | 0.381752 | 3.1:+61917977 | None:intergenic |
| CGTTGCTAGCCATCGAATAA+AGG | 0.384491 | 3.1:-61915713 | MS.gene052616:CDS |
| TGGAAAATCAGCCCATATTT+GGG | 0.385543 | 3.1:-61916159 | MS.gene052616:CDS |
| TATCGAGCAGACATGCAATT+AGG | 0.390161 | 3.1:+61915739 | None:intergenic |
| TCAAAACCATCCTGCAGCTT+TGG | 0.391132 | 3.1:-61916450 | MS.gene052616:CDS |
| ATAAATTACCTGCTTTAGGC+TGG | 0.405602 | 3.1:+61915483 | None:intergenic |
| GGCCAGAGGTTGAGATTGAT+AGG | 0.407562 | 3.1:-61917403 | MS.gene052616:CDS |
| TGCTTTCTCAAAACAATACT+TGG | 0.410693 | 3.1:+61914712 | None:intergenic |
| CTTCGTCGTCATCGGCTTCA+GGG | 0.410958 | 3.1:+61919200 | None:intergenic |
| GCGATAGAGAATTCCCATAT+TGG | 0.414575 | 3.1:+61914859 | None:intergenic |
| ATGATTGCCTTGGTAATCTT+GGG | 0.414967 | 3.1:-61916916 | MS.gene052616:CDS |
| AGTTGAAATGGCTGAGAAGT+TGG | 0.416552 | 3.1:-61919293 | None:intergenic |
| TCGAATTTCCAGCAAGTGCT+TGG | 0.422363 | 3.1:-61916099 | MS.gene052616:CDS |
| TGCCACTGAACTGCATCATC+TGG | 0.425008 | 3.1:+61915266 | None:intergenic |
| GAGCTTCCAATAGCTTGGGC+CGG | 0.434057 | 3.1:-61915598 | MS.gene052616:CDS |
| TGGTTGAGCTTCCAATAGCT+TGG | 0.439259 | 3.1:-61915603 | MS.gene052616:CDS |
| CCTATGCATTTGCTATTACT+GGG | 0.443329 | 3.1:-61916127 | MS.gene052616:CDS |
| CTTGTGGACCATTGCAAGCC+CGG | 0.452199 | 3.1:+61915579 | None:intergenic |
| TTCCAGCAAGTGCTTGGAAA+AGG | 0.452640 | 3.1:-61916093 | MS.gene052616:intron |
| AAGATTAAACCAACCTCAAA+AGG | 0.456393 | 3.1:-61917540 | MS.gene052616:intron |
| GGTTGAGCTTCCAATAGCTT+GGG | 0.461056 | 3.1:-61915602 | MS.gene052616:CDS |
| CTTAGCAACATTAGCAGCCA+TGG | 0.461461 | 3.1:+61916211 | None:intergenic |
| GCCCTATCAATCTCAACCTC+TGG | 0.462898 | 3.1:+61917401 | None:intergenic |
| GGTTCAGAAGAGAGGTCAGC+AGG | 0.463431 | 3.1:-61919271 | MS.gene052616:CDS |
| CATCCAGCATTGAATCTGAT+TGG | 0.463555 | 3.1:+61914687 | None:intergenic |
| GTTGAAATGGCTGAGAAGTT+GGG | 0.466425 | 3.1:-61919292 | None:intergenic |
| GATGGTGATCCACATGTTCA+AGG | 0.468474 | 3.1:-61917930 | MS.gene052616:CDS |
| GCTGCTGTTGCCTGTGACAA+GGG | 0.471686 | 3.1:-61915182 | MS.gene052616:CDS |
| AGCTTCCAATAGCTTGGGCC+GGG | 0.472014 | 3.1:-61915597 | MS.gene052616:CDS |
| CACAGGCAACAGCAGCTTTG+AGG | 0.473023 | 3.1:+61915189 | None:intergenic |
| CTCTGGTGCAATGGCTAACA+AGG | 0.477527 | 3.1:+61916943 | None:intergenic |
| ATTGTCGTCTTCGTCGTCAT+CGG | 0.481606 | 3.1:+61919192 | None:intergenic |
| TCTTAAAACTGGCCGTGTGC+AGG | 0.483852 | 3.1:-61917120 | MS.gene052616:intron |
| TTAGCTGCAGTTAAAGCAGA+TGG | 0.490121 | 3.1:-61916179 | MS.gene052616:CDS |
| AGCAGCATACGAAAGTGAAC+AGG | 0.492446 | 3.1:-61915539 | MS.gene052616:CDS |
| TTTCTGCCTCCTTTATTCGA+TGG | 0.493557 | 3.1:+61915704 | None:intergenic |
| CCAAGGCAATCATAGTTCTC+TGG | 0.493751 | 3.1:+61916926 | None:intergenic |
| AAGCTATTGGAAGCTCAACC+AGG | 0.494761 | 3.1:+61915605 | None:intergenic |
| GGCAAGATTTGCCCAAATAT+GGG | 0.501539 | 3.1:+61916148 | None:intergenic |
| ACTGAAAGAATCAACGCAAT+CGG | 0.504512 | 3.1:-61917186 | MS.gene052616:CDS |
| ATATCAGGCAGGCAGCTGTA+TGG | 0.504895 | 3.1:-61917163 | MS.gene052616:CDS |
| AAGTCACTTGAACTTCAGCC+TGG | 0.506218 | 3.1:-61914797 | MS.gene052616:CDS |
| CCTTCACAGTCTTTGTGCCA+GGG | 0.508302 | 3.1:-61915234 | MS.gene052616:CDS |
| TGCTGTTTCCAGCCTAAAGC+AGG | 0.510009 | 3.1:-61915491 | MS.gene052616:intron |
| CATGCTATACTATCCAATAT+GGG | 0.512664 | 3.1:-61914872 | MS.gene052616:CDS |
| ATAGAAGAATCCGTCTTGCT+AGG | 0.514510 | 3.1:+61917972 | None:intergenic |
| TTGAATGCAGGAGCATATCC+AGG | 0.515164 | 3.1:+61914779 | None:intergenic |
| AAGCTGAAGAAGTATACAAA+CGG | 0.516822 | 3.1:-61914925 | MS.gene052616:CDS |
| ATATCTCATGCTGAGCCTTG+TGG | 0.521865 | 3.1:+61915563 | None:intergenic |
| GCTGGTGCAAATGCTGCTGA+TGG | 0.522835 | 3.1:-61916251 | MS.gene052616:CDS |
| GGCTATATTGGCTTATGAGA+AGG | 0.523725 | 3.1:-61917444 | MS.gene052616:CDS |
| AGCTGAAGAAGTATACAAAC+GGG | 0.524553 | 3.1:-61914924 | MS.gene052616:CDS |
| AGAGGTCAGCAGGGATGAAG+AGG | 0.525738 | 3.1:-61919261 | MS.gene052616:CDS |
| AGCTGCTGTTGCCTGTGACA+AGG | 0.533743 | 3.1:-61915183 | MS.gene052616:CDS |
| AGTTCAGATTCACCATGCAC+AGG | 0.536112 | 3.1:-61917363 | MS.gene052616:intron |
| TTCGTCTGCTGGAAATGAGA+TGG | 0.536129 | 3.1:-61915656 | MS.gene052616:CDS |
| AGCTTGGGCCGGGCTTGCAA+TGG | 0.536432 | 3.1:-61915587 | MS.gene052616:CDS |
| GTAAATTGTTGAACAAATTG+GGG | 0.537086 | 3.1:-61918010 | MS.gene052616:CDS |
| CATGGCTGCTAATGTTGCTA+AGG | 0.538770 | 3.1:-61916210 | MS.gene052616:CDS |
| GCAGTTCAGTGGCACCAACT+TGG | 0.551417 | 3.1:-61915257 | MS.gene052616:CDS |
| GGTGAATCTGAACTAAAGAA+AGG | 0.552889 | 3.1:+61917372 | None:intergenic |
| ATGGTGATCCACATGTTCAA+GGG | 0.553742 | 3.1:-61917929 | MS.gene052616:CDS |
| ATCATAGTTCTCTGGTGCAA+TGG | 0.556060 | 3.1:+61916934 | None:intergenic |
| AGACCCAGATTGTTGAATGC+AGG | 0.558965 | 3.1:+61914767 | None:intergenic |
| TTTGCATATCTTCGACATTG+TGG | 0.559936 | 3.1:+61914637 | None:intergenic |
| CCAGAGAACTATGATTGCCT+TGG | 0.561944 | 3.1:-61916926 | MS.gene052616:CDS |
| GCTCCTGCATTCAACAATCT+GGG | 0.562852 | 3.1:-61914770 | MS.gene052616:CDS |
| TTCAAGTGACTTTGTAAACA+TGG | 0.562873 | 3.1:+61914808 | None:intergenic |
| AACCTTAATCAAGTTAGACT+TGG | 0.563544 | 3.1:+61914661 | None:intergenic |
| GCATAATTGACCAAAGCTGC+AGG | 0.564348 | 3.1:+61916440 | None:intergenic |
| ACTTGAACCTCACGAACTTG+AGG | 0.565121 | 3.1:-61917222 | MS.gene052616:CDS |
| CTTTAAGAGTGCATGAGGAA+AGG | 0.565441 | 3.1:+61914612 | None:intergenic |
| ATCATCTGGATCTTCCGCTA+TGG | 0.567531 | 3.1:+61915280 | None:intergenic |
| AAAGACTGTGAAGGCCAAGT+TGG | 0.570167 | 3.1:+61915243 | None:intergenic |
| TTCGTCGTCATCGGCTTCAG+GGG | 0.570497 | 3.1:+61919201 | None:intergenic |
| ATAGCTGCAACCCTTGTCAC+AGG | 0.572931 | 3.1:+61915172 | None:intergenic |
| CGGGCTTGCAATGGTCCACA+AGG | 0.573827 | 3.1:-61915578 | MS.gene052616:CDS |
| AACGCAATCGGATATCAGGC+AGG | 0.576139 | 3.1:-61917174 | MS.gene052616:CDS |
| TTCAAGGGGCTCCTTCAGCA+AGG | 0.576341 | 3.1:-61917914 | MS.gene052616:CDS |
| TGCAGAGGGTCTGTTAGAAG+AGG | 0.580781 | 3.1:-61914735 | MS.gene052616:CDS |
| AAGTGAACAGGACGGGCTGA+AGG | 0.584652 | 3.1:-61915527 | MS.gene052616:CDS |
| CCGTCTTGCTAGGTTTGGAA+CGG | 0.585221 | 3.1:+61917982 | None:intergenic |
| AAGAGATGGTGATTCATCCC+TGG | 0.585366 | 3.1:-61915623 | MS.gene052616:CDS |
| CAAGGATGACAAAACTGAGA+TGG | 0.588895 | 3.1:+61916961 | None:intergenic |
| GGCAGCTGTATGGAATACAC+TGG | 0.590135 | 3.1:-61917153 | MS.gene052616:CDS |
| AGAATTTCCTCAAGTTCGTG+AGG | 0.592255 | 3.1:+61917215 | None:intergenic |
| CACCACATACTGAAATCACC+AGG | 0.593600 | 3.1:-61919147 | MS.gene052616:intron |
| TGCTTCAGCAGAACAATCCA+TGG | 0.596840 | 3.1:-61916228 | MS.gene052616:CDS |
| GCCAGAGGTTGAGATTGATA+GGG | 0.602698 | 3.1:-61917402 | MS.gene052616:CDS |
| TATTGACTGTGGAGCTGATG+CGG | 0.604464 | 3.1:-61917952 | MS.gene052616:CDS |
| TCATTCTTTAAGAGTGCATG+AGG | 0.604832 | 3.1:+61914607 | None:intergenic |
| GAAGGAGCCCCTTGAACATG+TGG | 0.610791 | 3.1:+61917921 | None:intergenic |
| CATACGAAAGTGAACAGGAC+GGG | 0.613115 | 3.1:-61915534 | MS.gene052616:CDS |
| AATTGACCAAAGCTGCAGGA+TGG | 0.616871 | 3.1:+61916444 | None:intergenic |
| GTTCAGAAGAGAGGTCAGCA+GGG | 0.617646 | 3.1:-61919270 | MS.gene052616:CDS |
| AAGATTATCATACCTGTGCA+TGG | 0.619115 | 3.1:+61917351 | None:intergenic |
| AGAAGTTGGGTTCAGAAGAG+AGG | 0.621301 | 3.1:-61919279 | MS.gene052616:CDS |
| ATGGCTTCCATAATAAGAGA+TGG | 0.622030 | 3.1:-61915637 | MS.gene052616:CDS |
| ACTCCAATCAGATTCAATGC+TGG | 0.622689 | 3.1:-61914690 | MS.gene052616:CDS |
| ATCCAGATGATGCAGTTCAG+TGG | 0.625338 | 3.1:-61915268 | MS.gene052616:CDS |
| CTTTATTCGATGGCTAGCAA+CGG | 0.626635 | 3.1:+61915714 | None:intergenic |
| ACAAGGGTTGCAGCTATGCA+TGG | 0.627371 | 3.1:-61915166 | MS.gene052616:CDS |
| CCCAGTAATAGCAAATGCAT+AGG | 0.627469 | 3.1:+61916127 | None:intergenic |
| ACCAATAGCAACGAAGCTGA+AGG | 0.632759 | 3.1:-61918032 | MS.gene052616:CDS |
| CCCTGGCACAAAGACTGTGA+AGG | 0.636813 | 3.1:+61915234 | None:intergenic |
| GACTGTGGAGCTGATGCGGA+TGG | 0.637090 | 3.1:-61917948 | MS.gene052616:CDS |
| TGGTGATCCACATGTTCAAG+GGG | 0.640055 | 3.1:-61917928 | MS.gene052616:CDS |
| ACGGATTCTTCTATTGACTG+TGG | 0.641658 | 3.1:-61917963 | MS.gene052616:CDS |
| TCGTCGTCATCGGCTTCAGG+GGG | 0.644071 | 3.1:+61919202 | None:intergenic |
| AGAGATATTACTCAGGCCAG+AGG | 0.645910 | 3.1:-61917417 | MS.gene052616:CDS |
| GCAGACGAAAGCAATTCACT+AGG | 0.646897 | 3.1:+61915670 | None:intergenic |
| AGGCAGAAGAGATATTACTC+AGG | 0.648663 | 3.1:-61917424 | MS.gene052616:CDS |
| CCGTTCCAAACCTAGCAAGA+CGG | 0.649704 | 3.1:-61917982 | MS.gene052616:CDS |
| TACCTGGTGATTTCAGTATG+TGG | 0.650560 | 3.1:+61919145 | None:intergenic |
| TGCTAGCCATCGAATAAAGG+AGG | 0.650686 | 3.1:-61915710 | MS.gene052616:CDS |
| AGCTATTGGAAGCTCAACCA+GGG | 0.654408 | 3.1:+61915606 | None:intergenic |
| AGCTATGCATGGTCTAACCT+CGG | 0.657652 | 3.1:-61915155 | MS.gene052616:intron |
| AGGGATTGGTTCATGTTGCG+AGG | 0.658064 | 3.1:-61917613 | MS.gene052616:CDS |
| TCAAGGGGCTCCTTCAGCAA+GGG | 0.663459 | 3.1:-61917913 | MS.gene052616:CDS |
| AAGGTGCATGTACCTGCACA+CGG | 0.677017 | 3.1:+61917108 | None:intergenic |
| CTGGTGATTTCAGTATGTGG+TGG | 0.680891 | 3.1:+61919148 | None:intergenic |
| GCAGCTGTATGGAATACACT+GGG | 0.681640 | 3.1:-61917152 | MS.gene052616:CDS |
| AAGCTATCCCAAGATTACCA+AGG | 0.702190 | 3.1:+61916909 | None:intergenic |
| GCATACGAAAGTGAACAGGA+CGG | 0.707663 | 3.1:-61915535 | MS.gene052616:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTTATTTTATATATAAAAG+AGG | + | chr3.1:61917040-61917059 | None:intergenic | 10.0% |
| !!! | TAATTTTTGAATTAACATAT+AGG | - | chr3.1:61915790-61915809 | MS.gene052616:intron | 10.0% |
| !! | AATAAGTAAAATGATATACT+TGG | - | chr3.1:61917053-61917072 | MS.gene052616:intron | 15.0% |
| !! | AATTAAAACCACAAAAATAT+CGG | + | chr3.1:61917303-61917322 | None:intergenic | 15.0% |
| !! | ATAAGTAAAATGATATACTT+GGG | - | chr3.1:61917054-61917073 | MS.gene052616:intron | 15.0% |
| !!! | ATTTCAAGTGATATATTTTT+CGG | - | chr3.1:61915518-61915537 | MS.gene052616:CDS | 15.0% |
| !!! | ATTTTACATGTATTACATTT+TGG | - | chr3.1:61917999-61918018 | MS.gene052616:CDS | 15.0% |
| !!! | TTGAAGAAAATTTTGTAATA+TGG | - | chr3.1:61917584-61917603 | MS.gene052616:CDS | 15.0% |
| !! | AATAAAAAGAAAAAGATACC+TGG | + | chr3.1:61914767-61914786 | None:intergenic | 20.0% |
| !! | AATAGTATTACACAGAAAAA+AGG | + | chr3.1:61917258-61917277 | None:intergenic | 20.0% |
| !! | CATTTATAGTGTATTTATTG+AGG | - | chr3.1:61917846-61917865 | MS.gene052616:intron | 20.0% |
| !! | GATTAATAGAGTTTAAAAGT+GGG | + | chr3.1:61916082-61916101 | None:intergenic | 20.0% |
| !! | GTAATTTATTGCTTTCTTAT+AGG | - | chr3.1:61918424-61918443 | MS.gene052616:intron | 20.0% |
| !! | TAATTAACTAACAGAATTAC+TGG | - | chr3.1:61914911-61914930 | MS.gene052616:CDS | 20.0% |
| !! | TGATTAATAGAGTTTAAAAG+TGG | + | chr3.1:61916083-61916102 | None:intergenic | 20.0% |
| !! | TGTAATTTCATTGAAGATAT+TGG | - | chr3.1:61915465-61915484 | MS.gene052616:intron | 20.0% |
| !! | TTCGTAATAATTTGAGAAAA+TGG | - | chr3.1:61914984-61915003 | MS.gene052616:intron | 20.0% |
| !! | TTTAAAAAAGATTTGCACAA+TGG | - | chr3.1:61915152-61915171 | MS.gene052616:intron | 20.0% |
| !!! | AATTCTGAATATCTTTTTGT+TGG | - | chr3.1:61915745-61915764 | MS.gene052616:CDS | 20.0% |
| ! | AAATTAGCAAGTGTATACTT+AGG | + | chr3.1:61918495-61918514 | None:intergenic | 25.0% |
| ! | ACAAAACTAGGTATAATTGT+AGG | - | chr3.1:61916260-61916279 | MS.gene052616:intron | 25.0% |
| ! | ACTATAAATGATTGTAGCAA+GGG | + | chr3.1:61917836-61917855 | None:intergenic | 25.0% |
| ! | AGGTAAATTGTTGAACAAAT+TGG | - | chr3.1:61915881-61915900 | MS.gene052616:intron | 25.0% |
| ! | AGTTAATTATGAGTTACTTC+AGG | + | chr3.1:61914900-61914919 | None:intergenic | 25.0% |
| ! | ATACTATAGCACATTTACAA+AGG | + | chr3.1:61915598-61915617 | None:intergenic | 25.0% |
| ! | ATTCGTGATTTATGCTATTA+CGG | + | chr3.1:61915223-61915242 | None:intergenic | 25.0% |
| ! | CAAAAAAATCCAAAACAAAC+GGG | + | chr3.1:61915023-61915042 | None:intergenic | 25.0% |
| ! | CAAAACTAGGTATAATTGTA+GGG | - | chr3.1:61916261-61916280 | MS.gene052616:intron | 25.0% |
| ! | CCAAAAAAATCCAAAACAAA+CGG | + | chr3.1:61915024-61915043 | None:intergenic | 25.0% |
| ! | GAAAAAATATGAACTTGCAA+AGG | - | chr3.1:61919062-61919081 | MS.gene052616:intron | 25.0% |
| ! | GGTAAATTGTTGAACAAATT+GGG | - | chr3.1:61915882-61915901 | MS.gene052616:intron | 25.0% |
| ! | GTAAATTGTTGAACAAATTG+GGG | - | chr3.1:61915883-61915902 | MS.gene052616:intron | 25.0% |
| ! | GTTTGAATATTTCTTAGAAC+AGG | + | chr3.1:61917236-61917255 | None:intergenic | 25.0% |
| ! | TATTATCTCACATAGTTGTT+TGG | - | chr3.1:61918567-61918586 | MS.gene052616:intron | 25.0% |
| ! | TATTTATTGAGGTTGTTCAT+TGG | - | chr3.1:61917857-61917876 | MS.gene052616:intron | 25.0% |
| ! | TCATATTAAAGGACAAATCA+AGG | + | chr3.1:61917553-61917572 | None:intergenic | 25.0% |
| ! | TCGCTACATAATCATATTAA+AGG | + | chr3.1:61917564-61917583 | None:intergenic | 25.0% |
| ! | TGCATATGTTACAAACTAAA+GGG | + | chr3.1:61917119-61917138 | None:intergenic | 25.0% |
| ! | TGGGTTAAAAATGTATGAAT+AGG | - | chr3.1:61918913-61918932 | MS.gene052616:intron | 25.0% |
| ! | TTGCATATGTTACAAACTAA+AGG | + | chr3.1:61917120-61917139 | None:intergenic | 25.0% |
| !! | ATGGTTTTCATTTTGTCATA+TGG | - | chr3.1:61917603-61917622 | MS.gene052616:CDS | 25.0% |
| !!! | AAGATGGGTTAATAAAAACA+AGG | + | chr3.1:61918053-61918072 | None:intergenic | 25.0% |
| !!! | AGATGGGTTAATAAAAACAA+GGG | + | chr3.1:61918052-61918071 | None:intergenic | 25.0% |
| !!! | ATTAGGTCATTAACTTTTTC+AGG | - | chr3.1:61916428-61916447 | MS.gene052616:CDS | 25.0% |
| !!! | TCAAGCAGATCATTTTTTTT+TGG | - | chr3.1:61917935-61917954 | MS.gene052616:CDS | 25.0% |
| !!! | TCATATGGATTTTTAATTCC+AGG | - | chr3.1:61917618-61917637 | MS.gene052616:intron | 25.0% |
| !!! | TTAACTTTTTCAGGCTATAT+TGG | - | chr3.1:61916437-61916456 | MS.gene052616:CDS | 25.0% |
| AAACCTTGGTTATAGCATAA+CGG | - | chr3.1:61915271-61915290 | MS.gene052616:CDS | 30.0% | |
| AAAGGGTTATTCACTTCATA+TGG | - | chr3.1:61918893-61918912 | MS.gene052616:intron | 30.0% | |
| AACCAAGTCAAACATTGTAA+TGG | - | chr3.1:61915495-61915514 | MS.gene052616:CDS | 30.0% | |
| AACCTTAATCAAGTTAGACT+TGG | + | chr3.1:61919235-61919254 | None:intergenic | 30.0% | |
| AAGATTAAACCAACCTCAAA+AGG | - | chr3.1:61916353-61916372 | MS.gene052616:intron | 30.0% | |
| AAGGGTTATTCACTTCATAT+GGG | - | chr3.1:61918894-61918913 | MS.gene052616:intron | 30.0% | |
| ACATGCTATACTATCCAATA+TGG | - | chr3.1:61919020-61919039 | MS.gene052616:intron | 30.0% | |
| AGCAATAAATTACCTGCTTT+AGG | + | chr3.1:61918417-61918436 | None:intergenic | 30.0% | |
| ATCCATTACAATGTTTGACT+TGG | + | chr3.1:61915500-61915519 | None:intergenic | 30.0% | |
| ATGTTGTCAAATATCAGCTA+TGG | - | chr3.1:61915341-61915360 | MS.gene052616:intron | 30.0% | |
| CACTAAATCACAATCTACAT+TGG | + | chr3.1:61918091-61918110 | None:intergenic | 30.0% | |
| CACTATAAATGATTGTAGCA+AGG | + | chr3.1:61917837-61917856 | None:intergenic | 30.0% | |
| CATGCTATACTATCCAATAT+GGG | - | chr3.1:61919021-61919040 | MS.gene052616:intron | 30.0% | |
| CCATTTGAACTTACATTTGA+AGG | + | chr3.1:61917011-61917030 | None:intergenic | 30.0% | |
| CCTTCAAATGTAAGTTCAAA+TGG | - | chr3.1:61917008-61917027 | MS.gene052616:intron | 30.0% | |
| CTATAAATGATTGTAGCAAG+GGG | + | chr3.1:61917835-61917854 | None:intergenic | 30.0% | |
| CTCAGAAATATGAATGAACT+AGG | - | chr3.1:61914870-61914889 | MS.gene052616:CDS | 30.0% | |
| CTGATGAACTTTCTATTATC+AGG | + | chr3.1:61916632-61916651 | None:intergenic | 30.0% | |
| CTTGTCTGATGTTAAATGTT+TGG | - | chr3.1:61918529-61918548 | MS.gene052616:intron | 30.0% | |
| GGAAAGTTATGAAAGAGAAA+CGG | - | chr3.1:61915539-61915558 | MS.gene052616:CDS | 30.0% | |
| TCTTCCAAATTTACCTGTTA+CGG | - | chr3.1:61916380-61916399 | MS.gene052616:intron | 30.0% | |
| TGAAGACTGTGAGTTTAATT+TGG | - | chr3.1:61916021-61916040 | MS.gene052616:intron | 30.0% | |
| TGAATCACCATCTCTTATTA+TGG | + | chr3.1:61918266-61918285 | None:intergenic | 30.0% | |
| TGAGAAAATGGAAGTGATTA+AGG | - | chr3.1:61914996-61915015 | MS.gene052616:intron | 30.0% | |
| TGCTTTCTCAAAACAATACT+TGG | + | chr3.1:61919184-61919203 | None:intergenic | 30.0% | |
| TTCAAGTGACTTTGTAAACA+TGG | + | chr3.1:61919088-61919107 | None:intergenic | 30.0% | |
| TTCTATTATCAGGCACTATA+AGG | + | chr3.1:61916622-61916641 | None:intergenic | 30.0% | |
| TTTAGTTAGTAACAGTACTG+AGG | + | chr3.1:61917362-61917381 | None:intergenic | 30.0% | |
| TTTCCATGATTAAAGATAGC+TGG | - | chr3.1:61917964-61917983 | MS.gene052616:CDS | 30.0% | |
| ! | AAAATGAGCATGAGCATTTT+TGG | + | chr3.1:61916313-61916332 | None:intergenic | 30.0% |
| ! | AAATGAGCATGAGCATTTTT+GGG | + | chr3.1:61916312-61916331 | None:intergenic | 30.0% |
| ! | AAGCTGAAGAAGTATACAAA+CGG | - | chr3.1:61918968-61918987 | MS.gene052616:intron | 30.0% |
| ! | GTTATAGCATAACGGAATTT+GGG | - | chr3.1:61915279-61915298 | MS.gene052616:CDS | 30.0% |
| ! | TCGATCGTTATTTAAAACCT+TGG | - | chr3.1:61915257-61915276 | MS.gene052616:CDS | 30.0% |
| ! | TGAAGTGAATAACCCTTTTA+CGG | + | chr3.1:61918891-61918910 | None:intergenic | 30.0% |
| ! | TTTTACAACTACAAGCTTGT+CGG | + | chr3.1:61915565-61915584 | None:intergenic | 30.0% |
| ! | TTTTATTAACCCATCTTCTG+AGG | - | chr3.1:61918056-61918075 | MS.gene052616:CDS | 30.0% |
| !! | CTGAAGCATTTTTACACAAA+AGG | + | chr3.1:61917485-61917504 | None:intergenic | 30.0% |
| !! | GAGAAATACCGATATTTTTG+TGG | - | chr3.1:61917292-61917311 | MS.gene052616:intron | 30.0% |
| !! | GGTTTTATCCTTCTTAAAAC+TGG | - | chr3.1:61916762-61916781 | MS.gene052616:intron | 30.0% |
| !! | TTTGAAGTTTACATTGGTTC+AGG | + | chr3.1:61916897-61916916 | None:intergenic | 30.0% |
| !! | TTTGAGGTTGGTTTAATCTT+TGG | + | chr3.1:61916353-61916372 | None:intergenic | 30.0% |
| !!! | AAGGTTTTAAATAACGATCG+AGG | + | chr3.1:61915258-61915277 | None:intergenic | 30.0% |
| !!! | CAAGTTCATATTTTTTCTGC+TGG | + | chr3.1:61919059-61919078 | None:intergenic | 30.0% |
| !!! | CCGTTTGTTTTGGATTTTTT+TGG | - | chr3.1:61915021-61915040 | MS.gene052616:intron | 30.0% |
| !!! | CTAACTGACTAACTAGTTTT+AGG | + | chr3.1:61916165-61916184 | None:intergenic | 30.0% |
| AAAAATGCTTCAGTTGTAGC+AGG | - | chr3.1:61917492-61917511 | MS.gene052616:intron | 35.0% | |
| AAAACCTGCTGTCAATTGAA+TGG | + | chr3.1:61915681-61915700 | None:intergenic | 35.0% | |
| AAGATAGCTATCTGACTATC+TGG | + | chr3.1:61916130-61916149 | None:intergenic | 35.0% | |
| AAGATTATCATACCTGTGCA+TGG | + | chr3.1:61916545-61916564 | None:intergenic | 35.0% | |
| ACTAACTAAATTGCCTTCAG+TGG | - | chr3.1:61917372-61917391 | MS.gene052616:CDS | 35.0% | |
| ACTCCAGCTATCTTTAATCA+TGG | + | chr3.1:61917970-61917989 | None:intergenic | 35.0% | |
| ACTGAAAGAATCAACGCAAT+CGG | - | chr3.1:61916707-61916726 | MS.gene052616:intron | 35.0% | |
| AGCCAAGTCTAACTTGATTA+AGG | - | chr3.1:61919230-61919249 | MS.gene052616:CDS | 35.0% | |
| ATGGAAAATCAGCCCATATT+TGG | - | chr3.1:61917733-61917752 | MS.gene052616:intron | 35.0% | |
| ATGGCTTCCATAATAAGAGA+TGG | - | chr3.1:61918256-61918275 | MS.gene052616:intron | 35.0% | |
| ATTATCACCACATGTCACAT+GGG | + | chr3.1:61917151-61917170 | None:intergenic | 35.0% | |
| ATTCCGTTATGCTATAACCA+AGG | + | chr3.1:61915277-61915296 | None:intergenic | 35.0% | |
| CTAACCAAAAACAACAACAC+TGG | + | chr3.1:61916234-61916253 | None:intergenic | 35.0% | |
| CTACATACAGGTTACTCATT+AGG | - | chr3.1:61916411-61916430 | MS.gene052616:CDS | 35.0% | |
| CTAGGTATAATTGTAGGGAT+TGG | - | chr3.1:61916266-61916285 | MS.gene052616:intron | 35.0% | |
| GCAAGTGTATACTTAGGATA+AGG | + | chr3.1:61918489-61918508 | None:intergenic | 35.0% | |
| GGTGAATCTGAACTAAAGAA+AGG | + | chr3.1:61916524-61916543 | None:intergenic | 35.0% | |
| TAATTCCAAATCTCCACTGA+AGG | + | chr3.1:61917388-61917407 | None:intergenic | 35.0% | |
| TATTACGAAAGTCTACGTGT+CGG | + | chr3.1:61914973-61914992 | None:intergenic | 35.0% | |
| TCAAAACATTTCCACCAACA+AGG | + | chr3.1:61917892-61917911 | None:intergenic | 35.0% | |
| TGGAAAATCAGCCCATATTT+GGG | - | chr3.1:61917734-61917753 | MS.gene052616:intron | 35.0% | |
| TGTGTGGAAAAGAGAAAACA+AGG | + | chr3.1:61916807-61916826 | None:intergenic | 35.0% | |
| TTACACAGTGTTGTCAATTG+TGG | + | chr3.1:61915423-61915442 | None:intergenic | 35.0% | |
| TTTGCATATCTTCGACATTG+TGG | + | chr3.1:61919259-61919278 | None:intergenic | 35.0% | |
| ! | AGCTGAAGAAGTATACAAAC+GGG | - | chr3.1:61918969-61918988 | MS.gene052616:intron | 35.0% |
| ! | ATAAATTACCTGCTTTAGGC+TGG | + | chr3.1:61918413-61918432 | None:intergenic | 35.0% |
| ! | ATGATTGCCTTGGTAATCTT+GGG | - | chr3.1:61916977-61916996 | MS.gene052616:intron | 35.0% |
| ! | CATGTCTTTTTCCCGTAAAA+GGG | - | chr3.1:61918876-61918895 | MS.gene052616:intron | 35.0% |
| ! | GAAGTGAATAACCCTTTTAC+GGG | + | chr3.1:61918890-61918909 | None:intergenic | 35.0% |
| ! | GCTCATGCTCATTTTATACT+TGG | - | chr3.1:61916318-61916337 | MS.gene052616:intron | 35.0% |
| ! | GGTTAGTCAATGACAAAACT+AGG | - | chr3.1:61916248-61916267 | MS.gene052616:CDS | 35.0% |
| ! | GGTTATAGCATAACGGAATT+TGG | - | chr3.1:61915278-61915297 | MS.gene052616:CDS | 35.0% |
| ! | TATGATTGCCTTGGTAATCT+TGG | - | chr3.1:61916976-61916995 | MS.gene052616:intron | 35.0% |
| ! | TATGTGCTTCTTTTCTCTCT+TGG | - | chr3.1:61918761-61918780 | MS.gene052616:intron | 35.0% |
| ! | TCATTCTTTAAGAGTGCATG+AGG | + | chr3.1:61919289-61919308 | None:intergenic | 35.0% |
| ! | TTTGGAAGAACTACCTTTTG+AGG | + | chr3.1:61916369-61916388 | None:intergenic | 35.0% |
| ! | TTTTCTCTCTTGGCTGTAAT+GGG | - | chr3.1:61918771-61918790 | MS.gene052616:intron | 35.0% |
| !! | CCTATGCATTTGCTATTACT+GGG | - | chr3.1:61917766-61917785 | MS.gene052616:intron | 35.0% |
| !! | GTTTACATTGGTTCAGGAAA+TGG | + | chr3.1:61916891-61916910 | None:intergenic | 35.0% |
| !! | TAAATGTTTGGTGTCTCTGT+TGG | - | chr3.1:61918541-61918560 | MS.gene052616:intron | 35.0% |
| !! | TTGTGATGTTTTGAATTCCC+TGG | + | chr3.1:61918679-61918698 | None:intergenic | 35.0% |
| !!! | ATTGCCAGTGTTGTTGTTTT+TGG | - | chr3.1:61916227-61916246 | MS.gene052616:CDS | 35.0% |
| !!! | CAGGATGGTTTTGATCTTTT+AGG | + | chr3.1:61917437-61917456 | None:intergenic | 35.0% |
| !!! | CTGACTAACTAGTTTTAGGT+AGG | + | chr3.1:61916161-61916180 | None:intergenic | 35.0% |
| !!! | GATCTTTTAGGATCAACTCT+TGG | + | chr3.1:61917425-61917444 | None:intergenic | 35.0% |
| !!! | GGTCTTGTTTTTATTGCAGA+GGG | - | chr3.1:61919144-61919163 | MS.gene052616:intron | 35.0% |
| AACACTGTGTAACGAGCATT+TGG | - | chr3.1:61915431-61915450 | MS.gene052616:intron | 40.0% | |
| AAGCTATCCCAAGATTACCA+AGG | + | chr3.1:61916987-61917006 | None:intergenic | 40.0% | |
| AATCAACGCAATCGGATATC+AGG | - | chr3.1:61916715-61916734 | MS.gene052616:intron | 40.0% | |
| AATTGCCTTCAGTGGAGATT+TGG | - | chr3.1:61917380-61917399 | MS.gene052616:CDS | 40.0% | |
| ACACTGTGTAACGAGCATTT+GGG | - | chr3.1:61915432-61915451 | MS.gene052616:intron | 40.0% | |
| ACTCCAATCAGATTCAATGC+TGG | - | chr3.1:61919203-61919222 | MS.gene052616:CDS | 40.0% | |
| AGAATTTCCTCAAGTTCGTG+AGG | + | chr3.1:61916681-61916700 | None:intergenic | 40.0% | |
| AGGCAAGATTTGCCCAAATA+TGG | + | chr3.1:61917749-61917768 | None:intergenic | 40.0% | |
| AGGCAGAAGAGATATTACTC+AGG | - | chr3.1:61916469-61916488 | MS.gene052616:CDS | 40.0% | |
| AGTTGGCACTTGACAATCAA+AGG | + | chr3.1:61918829-61918848 | None:intergenic | 40.0% | |
| ATAGAAGAATCCGTCTTGCT+AGG | + | chr3.1:61915924-61915943 | None:intergenic | 40.0% | |
| ATCATAGTTCTCTGGTGCAA+TGG | + | chr3.1:61916962-61916981 | None:intergenic | 40.0% | |
| ATGGTGATCCACATGTTCAA+GGG | - | chr3.1:61915964-61915983 | MS.gene052616:intron | 40.0% | |
| ATTCATTCCCATGTGACATG+TGG | - | chr3.1:61917141-61917160 | MS.gene052616:CDS | 40.0% | |
| CAAGGATGACAAAACTGAGA+TGG | + | chr3.1:61916935-61916954 | None:intergenic | 40.0% | |
| CAATCAGTCTAATGTGCCTA+AGG | - | chr3.1:61916101-61916120 | MS.gene052616:CDS | 40.0% | |
| CATTATCACCACATGTCACA+TGG | + | chr3.1:61917152-61917171 | None:intergenic | 40.0% | |
| CCAAAACATCCTCAGAAGAT+GGG | + | chr3.1:61918068-61918087 | None:intergenic | 40.0% | |
| CCAATGTAAACTTCAAACCC+TGG | - | chr3.1:61916900-61916919 | MS.gene052616:CDS | 40.0% | |
| CCCAGTAATAGCAAATGCAT+AGG | + | chr3.1:61917769-61917788 | None:intergenic | 40.0% | |
| CTTTATTCGATGGCTAGCAA+CGG | + | chr3.1:61918182-61918201 | None:intergenic | 40.0% | |
| GAGTAACCTGTATGTAGACT+AGG | + | chr3.1:61916408-61916427 | None:intergenic | 40.0% | |
| GCGATAGAGAATTCCCATAT+TGG | + | chr3.1:61919037-61919056 | None:intergenic | 40.0% | |
| GGAACCGTAACAGGTAAATT+TGG | + | chr3.1:61916387-61916406 | None:intergenic | 40.0% | |
| GGCAAGATTTGCCCAAATAT+GGG | + | chr3.1:61917748-61917767 | None:intergenic | 40.0% | |
| GTGTTGTCAATTGTGGATAG+TGG | + | chr3.1:61915416-61915435 | None:intergenic | 40.0% | |
| TACCTGGTGATTTCAGTATG+TGG | + | chr3.1:61914751-61914770 | None:intergenic | 40.0% | |
| TATCGAGCAGACATGCAATT+AGG | + | chr3.1:61918157-61918176 | None:intergenic | 40.0% | |
| TCAAAATGCCGGACTAAAGT+TGG | + | chr3.1:61918846-61918865 | None:intergenic | 40.0% | |
| TTAGAACAGGATCTGCTGTA+TGG | + | chr3.1:61917223-61917242 | None:intergenic | 40.0% | |
| TTAGCTGCAGTTAAAGCAGA+TGG | - | chr3.1:61917714-61917733 | MS.gene052616:intron | 40.0% | |
| TTGTCCATTCAATTGACAGC+AGG | - | chr3.1:61915674-61915693 | MS.gene052616:CDS | 40.0% | |
| TTTCTGCCTCCTTTATTCGA+TGG | + | chr3.1:61918192-61918211 | None:intergenic | 40.0% | |
| TTTCTTATAGGTATGTCCCC+AGG | - | chr3.1:61918436-61918455 | MS.gene052616:intron | 40.0% | |
| ! | ACGGATTCTTCTATTGACTG+TGG | - | chr3.1:61915930-61915949 | MS.gene052616:intron | 40.0% |
| ! | ATACAAACGGGCTTTGTCTT+TGG | - | chr3.1:61918981-61919000 | MS.gene052616:intron | 40.0% |
| ! | CAGTACTGAGGAAAGACATA+TGG | + | chr3.1:61917350-61917369 | None:intergenic | 40.0% |
| ! | CATCCAGCATTGAATCTGAT+TGG | + | chr3.1:61919209-61919228 | None:intergenic | 40.0% |
| ! | CCAGGGTTTGAAGTTTACAT+TGG | + | chr3.1:61916903-61916922 | None:intergenic | 40.0% |
| ! | CCATGTCTTTTTCCCGTAAA+AGG | - | chr3.1:61918875-61918894 | MS.gene052616:intron | 40.0% |
| ! | CCTTTTACGGGAAAAAGACA+TGG | + | chr3.1:61918878-61918897 | None:intergenic | 40.0% |
| ! | CTTTAAGAGTGCATGAGGAA+AGG | + | chr3.1:61919284-61919303 | None:intergenic | 40.0% |
| ! | CTTTTCTCTCTTGGCTGTAA+TGG | - | chr3.1:61918770-61918789 | MS.gene052616:intron | 40.0% |
| ! | GAGGAAACAATTCGCTGTTT+TGG | - | chr3.1:61914651-61914670 | MS.gene052616:CDS | 40.0% |
| ! | GATTAAGGACCCGTTTGTTT+TGG | - | chr3.1:61915011-61915030 | MS.gene052616:intron | 40.0% |
| ! | TCTGACTATCTGGAATCCTT+AGG | + | chr3.1:61916120-61916139 | None:intergenic | 40.0% |
| ! | TTCGTTGCTATTGGTGTCTT+TGG | + | chr3.1:61915856-61915875 | None:intergenic | 40.0% |
| !! | ACTTTTTCTTCCCTTGCTGA+AGG | + | chr3.1:61915993-61916012 | None:intergenic | 40.0% |
| !! | GCCTATGCATTTGCTATTAC+TGG | - | chr3.1:61917765-61917784 | MS.gene052616:intron | 40.0% |
| !! | GGATTTTTAATTCCAGGTGC+TGG | - | chr3.1:61917624-61917643 | MS.gene052616:intron | 40.0% |
| !! | GGCTATATTGGCTTATGAGA+AGG | - | chr3.1:61916449-61916468 | MS.gene052616:CDS | 40.0% |
| !!! | GAAGAACTACCTTTTGAGGT+TGG | + | chr3.1:61916365-61916384 | None:intergenic | 40.0% |
| !!! | GGGTCTTGTTTTTATTGCAG+AGG | - | chr3.1:61919143-61919162 | MS.gene052616:intron | 40.0% |
| AAAGACTGTGAAGGCCAAGT+TGG | + | chr3.1:61918653-61918672 | None:intergenic | 45.0% | |
| AAGAGATGGTGATTCATCCC+TGG | - | chr3.1:61918270-61918289 | MS.gene052616:intron | 45.0% | |
| AAGCTATTGGAAGCTCAACC+AGG | + | chr3.1:61918291-61918310 | None:intergenic | 45.0% | |
| AAGTCACTTGAACTTCAGCC+TGG | - | chr3.1:61919096-61919115 | MS.gene052616:intron | 45.0% | |
| AATTGACCAAAGCTGCAGGA+TGG | + | chr3.1:61917452-61917471 | None:intergenic | 45.0% | |
| ACCAATAGCAACGAAGCTGA+AGG | - | chr3.1:61915861-61915880 | MS.gene052616:intron | 45.0% | |
| ACCTTCAGCTTCGTTGCTAT+TGG | + | chr3.1:61915865-61915884 | None:intergenic | 45.0% | |
| ACGGGAAAAAGACATGGAAG+AGG | + | chr3.1:61918872-61918891 | None:intergenic | 45.0% | |
| ACGGTTCCTAGTCTACATAC+AGG | - | chr3.1:61916399-61916418 | MS.gene052616:intron | 45.0% | |
| ACTTGAACCTCACGAACTTG+AGG | - | chr3.1:61916671-61916690 | MS.gene052616:intron | 45.0% | |
| AGAAGTTGGGTTCAGAAGAG+AGG | - | chr3.1:61914614-61914633 | MS.gene052616:CDS | 45.0% | |
| AGAATCCGTCTTGCTAGGTT+TGG | + | chr3.1:61915919-61915938 | None:intergenic | 45.0% | |
| AGACCCAGATTGTTGAATGC+AGG | + | chr3.1:61919129-61919148 | None:intergenic | 45.0% | |
| AGAGATATTACTCAGGCCAG+AGG | - | chr3.1:61916476-61916495 | MS.gene052616:CDS | 45.0% | |
| AGCAGCATACGAAAGTGAAC+AGG | - | chr3.1:61918354-61918373 | MS.gene052616:intron | 45.0% | |
| AGCTATGCATGGTCTAACCT+CGG | - | chr3.1:61918738-61918757 | MS.gene052616:intron | 45.0% | |
| AGCTATTGGAAGCTCAACCA+GGG | + | chr3.1:61918290-61918309 | None:intergenic | 45.0% | |
| AGTGAATTGCTTTCGTCTGC+TGG | - | chr3.1:61918226-61918245 | MS.gene052616:intron | 45.0% | |
| AGTTCAGATTCACCATGCAC+AGG | - | chr3.1:61916530-61916549 | MS.gene052616:intron | 45.0% | |
| ATATCTCATGCTGAGCCTTG+TGG | + | chr3.1:61918333-61918352 | None:intergenic | 45.0% | |
| ATCATCTGGATCTTCCGCTA+TGG | + | chr3.1:61918616-61918635 | None:intergenic | 45.0% | |
| ATCCAGATGATGCAGTTCAG+TGG | - | chr3.1:61918625-61918644 | MS.gene052616:intron | 45.0% | |
| ATCTGCTGTATGGTGCATTG+CGG | + | chr3.1:61917213-61917232 | None:intergenic | 45.0% | |
| ATTGTCGTCTTCGTCGTCAT+CGG | + | chr3.1:61914704-61914723 | None:intergenic | 45.0% | |
| CACCACATACTGAAATCACC+AGG | - | chr3.1:61914746-61914765 | MS.gene052616:CDS | 45.0% | |
| CATACGAAAGTGAACAGGAC+GGG | - | chr3.1:61918359-61918378 | MS.gene052616:intron | 45.0% | |
| CATGGCTGCTAATGTTGCTA+AGG | - | chr3.1:61917683-61917702 | MS.gene052616:intron | 45.0% | |
| CCAAGGCAATCATAGTTCTC+TGG | + | chr3.1:61916970-61916989 | None:intergenic | 45.0% | |
| CCAGAGAACTATGATTGCCT+TGG | - | chr3.1:61916967-61916986 | MS.gene052616:CDS | 45.0% | |
| CGGGAAAAAGACATGGAAGA+GGG | + | chr3.1:61918871-61918890 | None:intergenic | 45.0% | |
| CGTTGCTAGCCATCGAATAA+AGG | - | chr3.1:61918180-61918199 | MS.gene052616:intron | 45.0% | |
| CTGGTGATTTCAGTATGTGG+TGG | + | chr3.1:61914748-61914767 | None:intergenic | 45.0% | |
| CTTAGCAACATTAGCAGCCA+TGG | + | chr3.1:61917685-61917704 | None:intergenic | 45.0% | |
| GATGGTGATCCACATGTTCA+AGG | - | chr3.1:61915963-61915982 | MS.gene052616:intron | 45.0% | |
| GCAGACGAAAGCAATTCACT+AGG | + | chr3.1:61918226-61918245 | None:intergenic | 45.0% | |
| GCAGCTGTATGGAATACACT+GGG | - | chr3.1:61916741-61916760 | MS.gene052616:intron | 45.0% | |
| GCATAATTGACCAAAGCTGC+AGG | + | chr3.1:61917456-61917475 | None:intergenic | 45.0% | |
| GCATACGAAAGTGAACAGGA+CGG | - | chr3.1:61918358-61918377 | MS.gene052616:intron | 45.0% | |
| GCCAAAACATCCTCAGAAGA+TGG | + | chr3.1:61918069-61918088 | None:intergenic | 45.0% | |
| GCCAGAGGTTGAGATTGATA+GGG | - | chr3.1:61916491-61916510 | MS.gene052616:CDS | 45.0% | |
| GCTCCTGCATTCAACAATCT+GGG | - | chr3.1:61919123-61919142 | MS.gene052616:intron | 45.0% | |
| GGTTGAGCTTCCAATAGCTT+GGG | - | chr3.1:61918291-61918310 | MS.gene052616:intron | 45.0% | |
| GTCAAGTGCCAACTTTAGTC+CGG | - | chr3.1:61918835-61918854 | MS.gene052616:intron | 45.0% | |
| TAACGATCGAGGTCGCATTA+AGG | + | chr3.1:61915247-61915266 | None:intergenic | 45.0% | |
| TCAAAACCATCCTGCAGCTT+TGG | - | chr3.1:61917443-61917462 | MS.gene052616:CDS | 45.0% | |
| TCGAATTTCCAGCAAGTGCT+TGG | - | chr3.1:61917794-61917813 | MS.gene052616:intron | 45.0% | |
| TGCTAGCCATCGAATAAAGG+AGG | - | chr3.1:61918183-61918202 | MS.gene052616:intron | 45.0% | |
| TGCTCCTGCATTCAACAATC+TGG | - | chr3.1:61919122-61919141 | MS.gene052616:intron | 45.0% | |
| TGCTTCAGCAGAACAATCCA+TGG | - | chr3.1:61917665-61917684 | MS.gene052616:intron | 45.0% | |
| TGGTGATCCACATGTTCAAG+GGG | - | chr3.1:61915965-61915984 | MS.gene052616:intron | 45.0% | |
| TGGTTGAGCTTCCAATAGCT+TGG | - | chr3.1:61918290-61918309 | MS.gene052616:intron | 45.0% | |
| TGTAGACTAGGAACCGTAAC+AGG | + | chr3.1:61916396-61916415 | None:intergenic | 45.0% | |
| TTCCAGCAAGTGCTTGGAAA+AGG | - | chr3.1:61917800-61917819 | MS.gene052616:intron | 45.0% | |
| TTCGTCTGCTGGAAATGAGA+TGG | - | chr3.1:61918237-61918256 | MS.gene052616:intron | 45.0% | |
| ! | ATTGGTTTCCTGGTCCTTGT+TGG | - | chr3.1:61917875-61917894 | MS.gene052616:intron | 45.0% |
| ! | GAGAAAAGAAGCACATACCG+AGG | + | chr3.1:61918758-61918777 | None:intergenic | 45.0% |
| ! | TATTGACTGTGGAGCTGATG+CGG | - | chr3.1:61915941-61915960 | MS.gene052616:intron | 45.0% |
| ! | TGTGAGAGCTTTCAAGTGTG+TGG | + | chr3.1:61916823-61916842 | None:intergenic | 45.0% |
| ! | TTGAATGCAGGAGCATATCC+AGG | + | chr3.1:61919117-61919136 | None:intergenic | 45.0% |
| ! | TTTTCCTTCCCTTTGTTGCC+AGG | - | chr3.1:61918117-61918136 | MS.gene052616:intron | 45.0% |
| ! | TTTTGCTGCCTGGCAACAAA+GGG | + | chr3.1:61918128-61918147 | None:intergenic | 45.0% |
| !! | CAATGTTTGACTTGGTTGCG+AGG | + | chr3.1:61915492-61915511 | None:intergenic | 45.0% |
| !! | CCCATCTTCTGAGGATGTTT+TGG | - | chr3.1:61918065-61918084 | MS.gene052616:CDS | 45.0% |
| !! | GAGGTTGTTCATTGGTTTCC+TGG | - | chr3.1:61917865-61917884 | MS.gene052616:intron | 45.0% |
| AACGCAATCGGATATCAGGC+AGG | - | chr3.1:61916719-61916738 | MS.gene052616:intron | 50.0% | |
| AAGGTGCATGTACCTGCACA+CGG | + | chr3.1:61916788-61916807 | None:intergenic | 50.0% | |
| ACAAGGGTTGCAGCTATGCA+TGG | - | chr3.1:61918727-61918746 | MS.gene052616:intron | 50.0% | |
| ATAGCTGCAACCCTTGTCAC+AGG | + | chr3.1:61918724-61918743 | None:intergenic | 50.0% | |
| ATAGGTATGTCCCCAGGTTG+AGG | - | chr3.1:61918442-61918461 | MS.gene052616:intron | 50.0% | |
| ATATCAGGCAGGCAGCTGTA+TGG | - | chr3.1:61916730-61916749 | MS.gene052616:intron | 50.0% | |
| CATTTCCACCAACAAGGACC+AGG | + | chr3.1:61917886-61917905 | None:intergenic | 50.0% | |
| CCGTCTTGCTAGGTTTGGAA+CGG | + | chr3.1:61915914-61915933 | None:intergenic | 50.0% | |
| CCGTTCCAAACCTAGCAAGA+CGG | - | chr3.1:61915911-61915930 | MS.gene052616:intron | 50.0% | |
| CCTTCACAGTCTTTGTGCCA+GGG | - | chr3.1:61918659-61918678 | MS.gene052616:intron | 50.0% | |
| CTCTGGTGCAATGGCTAACA+AGG | + | chr3.1:61916953-61916972 | None:intergenic | 50.0% | |
| GCCCTATCAATCTCAACCTC+TGG | + | chr3.1:61916495-61916514 | None:intergenic | 50.0% | |
| GGAAGAGGGAGTCAAAATGC+CGG | + | chr3.1:61918857-61918876 | None:intergenic | 50.0% | |
| GGCAGCTGTATGGAATACAC+TGG | - | chr3.1:61916740-61916759 | MS.gene052616:intron | 50.0% | |
| GGCCAGAGGTTGAGATTGAT+AGG | - | chr3.1:61916490-61916509 | MS.gene052616:CDS | 50.0% | |
| GTTCAGAAGAGAGGTCAGCA+GGG | - | chr3.1:61914623-61914642 | MS.gene052616:CDS | 50.0% | |
| TCTGCTGTATGGTGCATTGC+GGG | + | chr3.1:61917212-61917231 | None:intergenic | 50.0% | |
| TCTTAAAACTGGCCGTGTGC+AGG | - | chr3.1:61916773-61916792 | MS.gene052616:intron | 50.0% | |
| TGAGATGGCACTCTACACCA+GGG | + | chr3.1:61916920-61916939 | None:intergenic | 50.0% | |
| TGCAGAGGGTCTGTTAGAAG+AGG | - | chr3.1:61919158-61919177 | MS.gene052616:CDS | 50.0% | |
| TGCCACTGAACTGCATCATC+TGG | + | chr3.1:61918630-61918649 | None:intergenic | 50.0% | |
| TTCCATCTGCACCTCAACCT+GGG | + | chr3.1:61918456-61918475 | None:intergenic | 50.0% | |
| TTGTTGCCAGGCAGCAAAAC+TGG | - | chr3.1:61918129-61918148 | MS.gene052616:intron | 50.0% | |
| TTTCCATCTGCACCTCAACC+TGG | + | chr3.1:61918457-61918476 | None:intergenic | 50.0% | |
| ! | CACCTTTTCCAAGCACTTGC+TGG | + | chr3.1:61917805-61917824 | None:intergenic | 50.0% |
| ! | CTACGTGTCGGTATCGAGTT+CGG | + | chr3.1:61914961-61914980 | None:intergenic | 50.0% |
| ! | GTTTTGCTGCCTGGCAACAA+AGG | + | chr3.1:61918129-61918148 | None:intergenic | 50.0% |
| ! | TAGGTTCCAGTTTTGCTGCC+TGG | + | chr3.1:61918138-61918157 | None:intergenic | 50.0% |
| !! | AGGGATTGGTTCATGTTGCG+AGG | - | chr3.1:61916280-61916299 | MS.gene052616:intron | 50.0% |
| !! | GTGCTTGGAAAAGGTGCTCA+TGG | - | chr3.1:61917809-61917828 | MS.gene052616:intron | 50.0% |
| !! | TGCTGTTTCCAGCCTAAAGC+AGG | - | chr3.1:61918402-61918421 | MS.gene052616:intron | 50.0% |
| !!! | GCACACGGCCAGTTTTAAGA+AGG | + | chr3.1:61916773-61916792 | None:intergenic | 50.0% |
| AGAGGTCAGCAGGGATGAAG+AGG | - | chr3.1:61914632-61914651 | MS.gene052616:CDS | 55.0% | |
| AGCTGCTGTTGCCTGTGACA+AGG | - | chr3.1:61918710-61918729 | MS.gene052616:intron | 55.0% | |
| AGCTTCCAATAGCTTGGGCC+GGG | - | chr3.1:61918296-61918315 | MS.gene052616:intron | 55.0% | |
| CACAGGCAACAGCAGCTTTG+AGG | + | chr3.1:61918707-61918726 | None:intergenic | 55.0% | |
| CCCTGGCACAAAGACTGTGA+AGG | + | chr3.1:61918662-61918681 | None:intergenic | 55.0% | |
| CTGAGATGGCACTCTACACC+AGG | + | chr3.1:61916921-61916940 | None:intergenic | 55.0% | |
| CTTCAGGGGGATCGATGTTG+AGG | + | chr3.1:61914681-61914700 | None:intergenic | 55.0% | |
| CTTGTGGACCATTGCAAGCC+CGG | + | chr3.1:61918317-61918336 | None:intergenic | 55.0% | |
| GAAGGAGCCCCTTGAACATG+TGG | + | chr3.1:61915975-61915994 | None:intergenic | 55.0% | |
| GAGCTTCCAATAGCTTGGGC+CGG | - | chr3.1:61918295-61918314 | MS.gene052616:intron | 55.0% | |
| GCAGTTCAGTGGCACCAACT+TGG | - | chr3.1:61918636-61918655 | MS.gene052616:intron | 55.0% | |
| GCCTTCACAGTCTTTGTGCC+AGG | - | chr3.1:61918658-61918677 | MS.gene052616:intron | 55.0% | |
| GCTGCTGTTGCCTGTGACAA+GGG | - | chr3.1:61918711-61918730 | MS.gene052616:intron | 55.0% | |
| GCTGGTGCAAATGCTGCTGA+TGG | - | chr3.1:61917642-61917661 | MS.gene052616:intron | 55.0% | |
| GGTTCAGAAGAGAGGTCAGC+AGG | - | chr3.1:61914622-61914641 | MS.gene052616:CDS | 55.0% | |
| GGTTTCCTGGTCCTTGTTGG+TGG | - | chr3.1:61917878-61917897 | MS.gene052616:intron | 55.0% | |
| TCAAGGGGCTCCTTCAGCAA+GGG | - | chr3.1:61915980-61915999 | MS.gene052616:intron | 55.0% | |
| TCCATCTGCACCTCAACCTG+GGG | + | chr3.1:61918455-61918474 | None:intergenic | 55.0% | |
| TTCAAGGGGCTCCTTCAGCA+AGG | - | chr3.1:61915979-61915998 | MS.gene052616:intron | 55.0% | |
| !! | AAGTGAACAGGACGGGCTGA+AGG | - | chr3.1:61918366-61918385 | MS.gene052616:intron | 55.0% |
| !! | CTTCGTCGTCATCGGCTTCA+GGG | + | chr3.1:61914696-61914715 | None:intergenic | 55.0% |
| !! | TCTTCGTCGTCATCGGCTTC+AGG | + | chr3.1:61914697-61914716 | None:intergenic | 55.0% |
| !! | TTCGTCGTCATCGGCTTCAG+GGG | + | chr3.1:61914695-61914714 | None:intergenic | 55.0% |
| CGGGCTTGCAATGGTCCACA+AGG | - | chr3.1:61918315-61918334 | MS.gene052616:intron | 60.0% | |
| GACTGTGGAGCTGATGCGGA+TGG | - | chr3.1:61915945-61915964 | MS.gene052616:intron | 60.0% | |
| GCAGCATTTGCACCAGCACC+TGG | + | chr3.1:61917639-61917658 | None:intergenic | 60.0% | |
| GCTGCCTGGCAACAAAGGGA+AGG | + | chr3.1:61918124-61918143 | None:intergenic | 60.0% | |
| ! | TCCCCAGGTTGAGGTGCAGA+TGG | - | chr3.1:61918451-61918470 | MS.gene052616:intron | 60.0% |
| !! | TCGTCGTCATCGGCTTCAGG+GGG | + | chr3.1:61914694-61914713 | None:intergenic | 60.0% |
| AGCTTGGGCCGGGCTTGCAA+TGG | - | chr3.1:61918306-61918325 | MS.gene052616:intron | 65.0% | |
| GCAAGCCCGGCCCAAGCTAT+TGG | + | chr3.1:61918304-61918323 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 61914607 | 61919308 | 61914607 | ID=MS.gene052616 |
| chr3.1 | mRNA | 61914607 | 61919308 | 61914607 | ID=MS.gene052616.t1;Parent=MS.gene052616 |
| chr3.1 | exon | 61919148 | 61919308 | 61919148 | ID=MS.gene052616.t1.exon1;Parent=MS.gene052616.t1 |
| chr3.1 | CDS | 61919148 | 61919308 | 61919148 | ID=cds.MS.gene052616.t1;Parent=MS.gene052616.t1 |
| chr3.1 | exon | 61917887 | 61918103 | 61917887 | ID=MS.gene052616.t1.exon2;Parent=MS.gene052616.t1 |
| chr3.1 | CDS | 61917887 | 61918103 | 61917887 | ID=cds.MS.gene052616.t1;Parent=MS.gene052616.t1 |
| chr3.1 | exon | 61917541 | 61917633 | 61917541 | ID=MS.gene052616.t1.exon3;Parent=MS.gene052616.t1 |
| chr3.1 | CDS | 61917541 | 61917633 | 61917541 | ID=cds.MS.gene052616.t1;Parent=MS.gene052616.t1 |
| chr3.1 | exon | 61917364 | 61917465 | 61917364 | ID=MS.gene052616.t1.exon4;Parent=MS.gene052616.t1 |
| chr3.1 | CDS | 61917364 | 61917465 | 61917364 | ID=cds.MS.gene052616.t1;Parent=MS.gene052616.t1 |
| chr3.1 | exon | 61917121 | 61917288 | 61917121 | ID=MS.gene052616.t1.exon5;Parent=MS.gene052616.t1 |
| chr3.1 | CDS | 61917121 | 61917288 | 61917121 | ID=cds.MS.gene052616.t1;Parent=MS.gene052616.t1 |
| chr3.1 | exon | 61916899 | 61916987 | 61916899 | ID=MS.gene052616.t1.exon6;Parent=MS.gene052616.t1 |
| chr3.1 | CDS | 61916899 | 61916987 | 61916899 | ID=cds.MS.gene052616.t1;Parent=MS.gene052616.t1 |
| chr3.1 | exon | 61916402 | 61916523 | 61916402 | ID=MS.gene052616.t1.exon7;Parent=MS.gene052616.t1 |
| chr3.1 | CDS | 61916402 | 61916523 | 61916402 | ID=cds.MS.gene052616.t1;Parent=MS.gene052616.t1 |
| chr3.1 | exon | 61916094 | 61916275 | 61916094 | ID=MS.gene052616.t1.exon8;Parent=MS.gene052616.t1 |
| chr3.1 | CDS | 61916094 | 61916275 | 61916094 | ID=cds.MS.gene052616.t1;Parent=MS.gene052616.t1 |
| chr3.1 | exon | 61915492 | 61915776 | 61915492 | ID=MS.gene052616.t1.exon9;Parent=MS.gene052616.t1 |
| chr3.1 | CDS | 61915492 | 61915776 | 61915492 | ID=cds.MS.gene052616.t1;Parent=MS.gene052616.t1 |
| chr3.1 | exon | 61915156 | 61915303 | 61915156 | ID=MS.gene052616.t1.exon10;Parent=MS.gene052616.t1 |
| chr3.1 | CDS | 61915156 | 61915303 | 61915156 | ID=cds.MS.gene052616.t1;Parent=MS.gene052616.t1 |
| chr3.1 | exon | 61914607 | 61914980 | 61914607 | ID=MS.gene052616.t1.exon11;Parent=MS.gene052616.t1 |
| chr3.1 | CDS | 61914607 | 61914980 | 61914607 | ID=cds.MS.gene052616.t1;Parent=MS.gene052616.t1 |
| Gene Sequence |
| Protein sequence |
