AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene067939

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene067939.t1 MTR_8g069575 97.784 361 8 0 1 361 51 411 0.0 744
MS.gene067939.t1 MTR_5g033650 78.333 360 76 2 3 361 8 366 0.0 591
MS.gene067939.t1 MTR_3g077430 71.468 361 101 2 2 361 106 465 0.0 563
MS.gene067939.t1 MTR_4g105400 71.920 349 95 2 15 361 11 358 0.0 541
MS.gene067939.t1 MTR_8g069610 68.245 359 114 0 3 361 56 414 0.0 522
MS.gene067939.t1 MTR_8g069600 66.849 365 114 2 3 361 30 393 0.0 509
MS.gene067939.t1 MTR_3g095890 65.000 360 112 5 3 360 86 433 1.58e-169 479
MS.gene067939.t1 MTR_7g116420 57.963 383 137 4 2 360 57 439 9.48e-164 465
MS.gene067939.t1 MTR_8g069720 60.221 362 134 4 3 361 53 407 1.13e-161 459
MS.gene067939.t1 MTR_8g069580 61.878 362 113 5 3 361 55 394 2.78e-159 452
MS.gene067939.t1 MTR_1g079730 54.962 393 144 5 2 361 59 451 1.75e-158 452
MS.gene067939.t1 MTR_8g088510 56.842 380 139 5 2 360 40 415 2.47e-157 448
MS.gene067939.t1 MTR_2g062610 54.211 380 153 3 2 361 48 426 3.89e-154 440
MS.gene067939.t1 MTR_8g069640 56.825 359 144 3 3 360 56 404 2.06e-145 417
MS.gene067939.t1 MTR_8g069590 63.844 307 108 3 56 361 1 305 2.56e-144 410
MS.gene067939.t1 MTR_8g069660 55.679 361 144 5 2 361 55 400 1.60e-141 407
MS.gene067939.t1 MTR_8g069715 55.342 365 151 4 2 361 53 410 1.08e-140 405
MS.gene067939.t1 MTR_2g062610 57.143 308 121 2 64 361 30 336 1.18e-135 390
MS.gene067939.t1 MTR_2g062610 57.143 308 121 2 64 361 37 343 2.23e-135 389
MS.gene067939.t1 MTR_2g073040 67.949 234 72 1 3 236 39 269 3.12e-117 341
MS.gene067939.t1 MTR_2g093840 55.490 337 133 9 29 361 37 360 2.77e-116 342
MS.gene067939.t1 MTR_2g073020 64.530 234 80 1 3 236 52 282 1.80e-109 321
MS.gene067939.t1 MTR_6g012620 41.026 390 189 10 3 361 31 410 9.64e-97 293
MS.gene067939.t1 MTR_3g104030 40.160 376 199 8 3 357 40 410 1.33e-88 273
MS.gene067939.t1 MTR_3g104000 39.221 385 206 7 3 361 35 417 1.54e-88 273
MS.gene067939.t1 MTR_3g103980 39.426 383 205 9 3 361 56 435 7.22e-88 271
MS.gene067939.t1 MTR_3g104070 39.108 381 198 9 3 356 43 416 1.20e-87 271
MS.gene067939.t1 MTR_8g069695 49.200 250 122 3 114 361 13 259 6.85e-84 255
MS.gene067939.t1 MTR_1g016910 36.951 387 213 7 3 361 37 420 1.59e-75 239
MS.gene067939.t1 MTR_3g104030 39.564 321 161 7 63 357 33 346 2.36e-71 226
MS.gene067939.t1 MTR_5g078580 36.550 342 197 10 3 338 40 367 2.38e-56 189
MS.gene067939.t1 MTR_8g040850 33.243 370 218 11 2 357 36 390 5.17e-54 182
MS.gene067939.t1 MTR_8g069630 63.077 130 46 2 233 361 1 129 1.75e-53 173
MS.gene067939.t1 MTR_8g040890 32.391 389 222 11 2 355 36 418 8.16e-52 177
MS.gene067939.t1 MTR_8g069750 61.607 112 43 0 169 280 151 262 2.27e-45 157
MS.gene067939.t1 MTR_5g094280 35.206 267 156 8 3 264 24 278 1.16e-42 151
MS.gene067939.t1 MTR_3g108680 29.609 358 224 13 8 357 49 386 2.57e-41 149
MS.gene067939.t1 MTR_5g092260 29.834 362 221 11 2 357 50 384 1.33e-40 147
MS.gene067939.t1 MTR_8g104480 29.830 352 205 11 23 355 9 337 6.52e-38 139
MS.gene067939.t1 MTR_2g046390 30.337 356 211 11 13 355 37 368 6.92e-38 139
MS.gene067939.t1 MTR_8g012985 37.083 240 135 9 126 355 4 237 1.39e-37 135
MS.gene067939.t1 MTR_2g046520 34.979 243 143 9 125 357 3 240 8.98e-34 125
MS.gene067939.t1 MTR_2g046430 34.979 243 143 9 125 357 3 240 2.66e-33 124
MS.gene067939.t1 MTR_8g069665 61.538 91 34 1 10 100 103 192 4.07e-33 122
MS.gene067939.t1 MTR_2g046300 28.804 368 186 14 13 355 37 353 4.03e-30 118
MS.gene067939.t1 MTR_2g073050 71.831 71 19 1 291 361 1 70 1.36e-29 108
MS.gene067939.t1 MTR_5g065260 31.897 232 149 5 126 355 2 226 1.71e-28 111
MS.gene067939.t1 MTR_8g069950 80.000 55 11 0 188 242 58 112 1.14e-23 94.7
MS.gene067939.t1 MTR_0009s0020 36.957 138 81 4 170 307 18 149 5.10e-22 91.3
MS.gene067939.t1 MTR_7g072230 32.955 176 104 7 188 353 34 205 7.57e-21 89.7
MS.gene067939.t1 MTR_2g046390 24.576 354 191 12 13 355 37 325 5.36e-18 84.3
MS.gene067939.t1 MTR_5g065920 55.357 56 23 1 115 170 9 62 7.27e-16 72.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene067939.t1 AT1G10750 76.111 360 86 0 2 361 108 467 0.0 602
MS.gene067939.t1 AT1G23340 72.778 360 98 0 2 361 50 409 0.0 572
MS.gene067939.t1 AT1G23340 72.778 360 98 0 2 361 50 409 0.0 572
MS.gene067939.t1 AT1G70550 72.423 359 99 0 3 361 107 465 0.0 569
MS.gene067939.t1 AT5G50150 71.191 361 103 1 2 361 60 420 0.0 555
MS.gene067939.t1 AT1G55360 56.614 378 145 5 2 361 46 422 2.26e-158 451
MS.gene067939.t1 AT3G13510 56.233 377 147 5 2 361 44 419 1.04e-157 449
MS.gene067939.t1 AT5G18460 56.430 381 140 5 2 360 53 429 1.84e-157 449
MS.gene067939.t1 AT5G56530 55.906 381 140 5 2 360 45 419 1.60e-153 439
MS.gene067939.t1 AT5G56530 55.906 381 140 5 2 360 45 419 1.60e-153 439
MS.gene067939.t1 AT2G44210 53.421 380 156 5 2 361 37 415 6.45e-147 422
MS.gene067939.t1 AT2G44210 49.756 410 155 6 2 361 37 445 8.24e-141 407
MS.gene067939.t1 AT2G44220 51.604 374 159 8 2 361 38 403 5.44e-133 386
MS.gene067939.t1 AT1G23340 74.043 235 61 0 2 236 50 284 9.32e-132 379
MS.gene067939.t1 AT2G44240 50.409 367 171 7 3 361 39 402 4.64e-123 360
MS.gene067939.t1 AT2G17750 44.959 367 188 8 3 360 34 395 4.52e-114 337
MS.gene067939.t1 AT3G48230 49.441 358 169 8 12 361 20 373 4.38e-112 332
MS.gene067939.t1 AT2G19360 44.588 388 184 8 3 360 39 425 4.82e-109 325
MS.gene067939.t1 AT2G44250 48.378 370 176 8 3 360 42 408 7.12e-109 325
MS.gene067939.t1 AT5G19170 46.067 356 168 7 11 355 23 365 2.52e-105 315
MS.gene067939.t1 AT1G70550 72.973 185 50 0 3 187 107 291 1.27e-98 294
MS.gene067939.t1 AT1G10750 64.078 206 73 1 2 206 108 313 8.33e-92 279
MS.gene067939.t1 AT2G44250 49.186 307 143 7 64 360 22 325 1.40e-89 272
MS.gene067939.t1 AT5G25950 38.875 391 205 8 1 361 46 432 3.27e-80 252
MS.gene067939.t1 AT2G20170 38.587 368 200 13 3 355 40 396 6.00e-73 232
MS.gene067939.t1 AT2G20170 38.587 368 200 13 3 355 40 396 6.00e-73 232
MS.gene067939.t1 AT5G25960 39.566 369 177 7 1 361 27 357 2.22e-72 229
MS.gene067939.t1 AT4G23390 37.228 368 205 13 3 355 41 397 5.01e-67 217
MS.gene067939.t1 AT4G23370 35.405 370 214 12 3 355 40 401 3.82e-66 214
MS.gene067939.t1 AT2G20170 36.141 368 192 13 3 355 40 379 6.63e-64 208
MS.gene067939.t1 AT4G23380 34.060 367 216 11 3 355 44 398 2.57e-59 197
MS.gene067939.t1 AT4G23350 31.233 365 234 8 2 355 42 400 4.79e-58 194
MS.gene067939.t1 AT4G23365 31.507 365 231 10 2 355 42 398 4.81e-58 193
MS.gene067939.t1 AT4G23355 32.249 369 223 11 2 355 42 398 1.42e-56 190
MS.gene067939.t1 AT4G23360 32.345 371 221 12 2 355 42 399 4.43e-55 186
MS.gene067939.t1 AT2G35250 33.724 341 198 9 20 357 24 339 4.29e-52 176
MS.gene067939.t1 AT4G17505 30.141 355 193 13 11 361 18 321 4.55e-45 157
MS.gene067939.t1 AT1G10190 32.533 375 209 19 3 355 42 394 7.40e-43 153
MS.gene067939.t1 AT4G15050 30.214 374 221 17 2 355 41 394 6.54e-41 148
MS.gene067939.t1 AT2G27320 33.333 303 171 10 22 320 30 305 1.24e-38 140
MS.gene067939.t1 AT2G24950 30.081 369 225 16 2 355 59 409 1.37e-38 142
MS.gene067939.t1 AT4G10220 29.301 372 219 14 3 355 52 398 6.89e-36 135
MS.gene067939.t1 AT4G15053 32.628 331 185 15 3 314 46 357 8.72e-36 134
MS.gene067939.t1 AT5G46810 27.714 350 225 11 23 355 11 349 2.01e-33 127
MS.gene067939.t1 AT5G46820 28.451 355 226 12 14 355 8 347 3.27e-33 127
MS.gene067939.t1 AT4G23373 35.749 207 111 6 3 208 40 225 5.90e-33 125
MS.gene067939.t1 AT5G05030 28.889 360 225 12 7 357 22 359 6.41e-33 126
MS.gene067939.t1 AT5G25410 27.500 360 226 13 7 355 28 363 4.21e-32 124
MS.gene067939.t1 AT5G60380 28.863 343 215 14 23 355 44 367 1.01e-29 117
MS.gene067939.t1 AT5G46200 27.013 385 219 15 23 355 31 405 2.61e-29 117
MS.gene067939.t1 AT2G38255 33.810 210 105 6 23 225 14 196 5.58e-28 109
MS.gene067939.t1 AT4G10210 28.255 361 210 15 3 340 52 386 3.08e-27 111
MS.gene067939.t1 AT5G11660 30.717 293 181 11 73 357 26 304 8.26e-27 108
MS.gene067939.t1 AT4G23080 28.042 378 226 17 3 357 52 406 5.83e-26 107
MS.gene067939.t1 AT4G17860 28.977 352 202 17 23 355 29 351 7.57e-26 107
MS.gene067939.t1 AT5G25415 32.787 244 143 8 125 357 99 332 3.71e-24 101
MS.gene067939.t1 AT5G36680 28.383 303 181 12 72 360 51 331 1.74e-23 99.8
MS.gene067939.t1 AT5G36770 28.383 303 181 12 72 360 51 331 1.74e-23 99.8
MS.gene067939.t1 AT2G03930 53.125 96 42 3 110 202 38 133 1.79e-23 95.9
MS.gene067939.t1 AT5G04937 29.442 197 112 8 166 355 22 198 3.64e-17 79.7
MS.gene067939.t1 AT5G37520 27.706 231 128 10 131 356 2 198 3.98e-15 73.6

Find 99 sgRNAs with CRISPR-Local

Find 240 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCTTATTCACACACTTAA+AGG 0.115660 8.3:+33483158 MS.gene067939:CDS
TATGGATCTGGAAACTTAAT+TGG 0.136885 8.3:+33483123 MS.gene067939:CDS
ACCCTAGATTCTTCACTTAT+TGG 0.171239 8.3:+33481352 MS.gene067939:CDS
TCTTGTATATTATAACAATT+TGG 0.235227 8.3:-33483378 None:intergenic
ATCCTTTAAGTGTGTGAATA+AGG 0.263709 8.3:-33483160 None:intergenic
TCTCCAACTTCTACATATAA+TGG 0.288121 8.3:+33481601 MS.gene067939:CDS
AATTCAGCTTGTCTCAAATA+TGG 0.288451 8.3:+33480713 MS.gene067939:CDS
CCCATTTGCTTATGCTCTCT+TGG 0.302334 8.3:-33479411 None:intergenic
TTGCAAAAGCTGCATACTTT+AGG 0.303212 8.3:+33483286 MS.gene067939:CDS
GGGAATTGGTGGCTAGAATA+TGG 0.311539 8.3:+33483105 MS.gene067939:CDS
CAAAATGTCCACTACCCATT+TGG 0.312408 8.3:-33483251 None:intergenic
ATACAAGAAGGAACTAATAA+TGG 0.313088 8.3:+33483393 MS.gene067939:CDS
AGTGCAACTATGGTTCAATT+TGG 0.335293 8.3:+33483183 MS.gene067939:CDS
AGCCACCAATTCCCATGCTT+TGG 0.335334 8.3:-33483096 None:intergenic
TGGATCATCTCTGGTTCATT+TGG 0.338622 8.3:+33480733 MS.gene067939:CDS
GCTTGCTCTATTAACACATT+TGG 0.344553 8.3:+33479534 MS.gene067939:CDS
TTAGCTACAACATTGAGATT+TGG 0.370876 8.3:-33483351 None:intergenic
CTTAAAGGATAGTGCAACTA+TGG 0.372236 8.3:+33483173 MS.gene067939:CDS
TGCTACAATTTACTTTGCTC+TGG 0.378764 8.3:+33481535 MS.gene067939:CDS
GTCCAATAAGTGAAGAATCT+AGG 0.380593 8.3:-33481354 None:intergenic
AAAATGTCCACTACCCATTT+GGG 0.385012 8.3:-33483250 None:intergenic
ACTAGCAGTAATATTGCAAT+TGG 0.395249 8.3:+33481568 MS.gene067939:CDS
CTGGAAACTTAATTGGGTAT+TGG 0.396892 8.3:+33483130 MS.gene067939:CDS
TTGATATTAGCTTAATGATC+TGG 0.397300 8.3:+33481632 MS.gene067939:CDS
ACTGATGCATATCAAGGAAC+TGG 0.402596 8.3:+33481511 MS.gene067939:CDS
CAGGTCAGCCCAGAGCTCTA+TGG 0.408690 8.3:+33481321 MS.gene067939:intron
TCATTAAGCTAATATCAAAT+TGG 0.410645 8.3:-33481627 None:intergenic
TTTCAATTGTGGAGTTTCTC+AGG 0.412909 8.3:+33479450 MS.gene067939:CDS
CTAATCGGAATCGTTCCTTC+TGG 0.418990 8.3:-33479483 None:intergenic
TGAGACAAGCTGAATTCATA+TGG 0.421304 8.3:-33480706 None:intergenic
ATAGTGAACACAATGTCAAC+AGG 0.427759 8.3:+33483213 MS.gene067939:CDS
ACCAAGAGAGCATAAGCAAA+TGG 0.428963 8.3:+33479410 MS.gene067939:CDS
GGCTCACACATCAACCCAAA+TGG 0.429520 8.3:+33483236 MS.gene067939:CDS
GCCTGCTGTTAAGACAATTC+AGG 0.432132 8.3:+33479089 MS.gene067939:CDS
TACAAGAAGGAACTAATAAT+GGG 0.448624 8.3:+33483394 MS.gene067939:CDS
TAGCTATCCCCATAGAGCTC+TGG 0.454983 8.3:-33481330 None:intergenic
AAAATTGAAACGTGTTAGAA+TGG 0.456346 8.3:+33479560 MS.gene067939:CDS
TACCATTGAAGCTGGTTGGC+AGG 0.466050 8.3:+33480768 MS.gene067939:CDS
CCTCCATTATATGTAGAAGT+TGG 0.467832 8.3:-33481604 None:intergenic
AGCTATCCCCATAGAGCTCT+GGG 0.473291 8.3:-33481329 None:intergenic
AGGATCCAAAGCATGGGAAT+TGG 0.479599 8.3:+33483091 MS.gene067939:intron
GCAACTATGGTTCAATTTGG+TGG 0.479885 8.3:+33483186 MS.gene067939:CDS
TGCCTGCCAACCAGCTTCAA+TGG 0.481927 8.3:-33480770 None:intergenic
AGGTCAGCCCAGAGCTCTAT+GGG 0.482474 8.3:+33481322 MS.gene067939:intron
ACCTGAATTGTCTTAACAGC+AGG 0.484466 8.3:-33479090 None:intergenic
GTGAGTGGGAATGAGTACTA+TGG 0.487457 8.3:+33480640 MS.gene067939:CDS
AAAATTATAACTTTCAATTG+TGG 0.487536 8.3:+33479439 MS.gene067939:CDS
ATGGATCTGGAAACTTAATT+GGG 0.501045 8.3:+33483124 MS.gene067939:CDS
TCTCAAATATGGATCATCTC+TGG 0.501761 8.3:+33480724 MS.gene067939:CDS
CTTTAGGAATATGCAAGTTG+TGG 0.502120 8.3:+33483302 MS.gene067939:CDS
TCCAATAAGTGAAGAATCTA+GGG 0.502742 8.3:-33481353 None:intergenic
TGGTGGCTAGAATATGGATC+TGG 0.504803 8.3:+33483111 MS.gene067939:CDS
CCAAGAGAGCATAAGCAAAT+GGG 0.509356 8.3:+33479411 MS.gene067939:CDS
CATAAATGTGTGGGTCCCAC+AGG 0.510711 8.3:+33480675 MS.gene067939:CDS
TTATGCTCTCTTGGTCTCTC+CGG 0.511099 8.3:-33479402 None:intergenic
ATCCAAAGCATGGGAATTGG+TGG 0.528426 8.3:+33483094 MS.gene067939:CDS
AACATAGGATGGTCAAAAGC+TGG 0.536748 8.3:-33479250 None:intergenic
TTGCAGACTGATGCATATCA+AGG 0.537288 8.3:+33481505 MS.gene067939:intron
TTTATGTGTATAGGATCCTC+CGG 0.539657 8.3:+33479383 MS.gene067939:intron
GCTCACACATCAACCCAAAT+GGG 0.541941 8.3:+33483237 MS.gene067939:CDS
CAATCTATGATATCACCATC+AGG 0.544949 8.3:-33479208 None:intergenic
GAAGGAACTAATAATGGGTG+GGG 0.546366 8.3:+33483399 MS.gene067939:CDS
TTGTACCTCATGTCCATCGC+CGG 0.547979 8.3:-33479589 None:intergenic
GATCTCAATACCATTGAAGC+TGG 0.548557 8.3:+33480760 MS.gene067939:CDS
TCAATACCATTGAAGCTGGT+TGG 0.549014 8.3:+33480764 MS.gene067939:CDS
TTTGTCCTCTCAACATAGGA+TGG 0.550432 8.3:-33479261 None:intergenic
AGAAGGAACTAATAATGGGT+GGG 0.554565 8.3:+33483398 MS.gene067939:CDS
TACAACATTGAGATTTGGCA+AGG 0.560466 8.3:-33483346 None:intergenic
AAGTGTGTGAATAAGGAAGA+TGG 0.561354 8.3:-33483153 None:intergenic
TGCGTGTAGGATCCAAAGCA+TGG 0.565093 8.3:+33483084 MS.gene067939:intron
GTATATTATAACAATTTGGA+CGG 0.567975 8.3:-33483374 None:intergenic
TAGATTCTTCACTTATTGGA+CGG 0.568545 8.3:+33481356 MS.gene067939:CDS
TTTACTATGGTGGTCCTGGA+AGG 0.570062 8.3:+33483430 MS.gene067939:CDS
AATGATGCACAGCATGCAGT+TGG 0.572287 8.3:+33480613 MS.gene067939:intron
AAATGTGTGGGTCCCACAGG+TGG 0.578307 8.3:+33480678 MS.gene067939:CDS
ACATCAACCCAAATGGGTAG+TGG 0.582932 8.3:+33483243 MS.gene067939:CDS
TGCTCTCTTGGTCTCTCCGG+AGG 0.583271 8.3:-33479399 None:intergenic
CAAAAGCTAGCATAAATGTG+TGG 0.585357 8.3:+33480665 MS.gene067939:CDS
AGAATGGACACCACCGGCGA+TGG 0.585596 8.3:+33479576 MS.gene067939:CDS
TCATATGGACTTTCCACCTG+TGG 0.587354 8.3:-33480691 None:intergenic
CATATGGACTTTCCACCTGT+GGG 0.588692 8.3:-33480690 None:intergenic
AATTGTTATAATATACAAGA+AGG 0.590507 8.3:+33483381 MS.gene067939:CDS
TTTGACCATCCTATGTTGAG+AGG 0.592755 8.3:+33479256 MS.gene067939:CDS
CACCACCGGCGATGGACATG+AGG 0.599402 8.3:+33479584 MS.gene067939:CDS
CTGATGCATATCAAGGAACT+GGG 0.602205 8.3:+33481512 MS.gene067939:CDS
AAGAAGGAACTAATAATGGG+TGG 0.603081 8.3:+33483397 MS.gene067939:CDS
TACCTCATGTCCATCGCCGG+TGG 0.612456 8.3:-33479586 None:intergenic
AAAAGCTAGCATAAATGTGT+GGG 0.619969 8.3:+33480666 MS.gene067939:CDS
TATTAGCTTAATGATCTGGA+AGG 0.620476 8.3:+33481636 MS.gene067939:CDS
TCAGGTGAATCATGTCCAGA+AGG 0.626410 8.3:+33479468 MS.gene067939:CDS
GCGTGTAGGATCCAAAGCAT+GGG 0.628244 8.3:+33483085 MS.gene067939:intron
ACAACATTGAGATTTGGCAA+GGG 0.654257 8.3:-33483345 None:intergenic
CGTGTTAGAATGGACACCAC+CGG 0.654611 8.3:+33479570 MS.gene067939:CDS
CCAACTTCTACATATAATGG+AGG 0.662547 8.3:+33481604 MS.gene067939:CDS
ATGCAGTTGGATATGTGAGT+GGG 0.674700 8.3:+33480626 MS.gene067939:CDS
CATGCAGTTGGATATGTGAG+TGG 0.677188 8.3:+33480625 MS.gene067939:CDS
TAGTGAACACAATGTCAACA+GGG 0.694440 8.3:+33483214 MS.gene067939:CDS
GGTCAGCCCAGAGCTCTATG+GGG 0.745363 8.3:+33481323 MS.gene067939:intron
AGTGAACACAATGTCAACAG+GGG 0.745728 8.3:+33483215 MS.gene067939:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGTATTAAAAAAAATGATAA+TGG + chr8.3:33481472-33481491 MS.gene067939:intron 10.0%
!!! ATAATAATTTGTTTTGAAAA+AGG + chr8.3:33482320-33482339 MS.gene067939:intron 10.0%
!!! TCTTTTGAAATAATTAATAT+CGG + chr8.3:33480137-33480156 MS.gene067939:intron 10.0%
!!! TTTTATCAGAATATTATTTT+TGG - chr8.3:33480347-33480366 None:intergenic 10.0%
!! AAAAAATGTGATAAATTATG+TGG - chr8.3:33482568-33482587 None:intergenic 15.0%
!! AAAAAGAAAAAGAAAACATT+TGG - chr8.3:33480179-33480198 None:intergenic 15.0%
!! AAAAATGAAGGAATAAAAAA+AGG - chr8.3:33482681-33482700 None:intergenic 15.0%
!! AAAATTATAACTTTCAATTG+TGG + chr8.3:33479439-33479458 MS.gene067939:CDS 15.0%
!! AAAGAAAATATAGACAAAAA+TGG - chr8.3:33479933-33479952 None:intergenic 15.0%
!! AACAAATAGAACAATTAATT+TGG + chr8.3:33481107-33481126 MS.gene067939:intron 15.0%
!! AATTGTTATAATATACAAGA+AGG + chr8.3:33483381-33483400 MS.gene067939:CDS 15.0%
!! AGTAAAATATGCAAAATATT+AGG - chr8.3:33482721-33482740 None:intergenic 15.0%
!! ATTATTTCAAAAGAAATGAA+TGG - chr8.3:33480131-33480150 None:intergenic 15.0%
!! ATTTATATTAGATTCAATGT+TGG - chr8.3:33480544-33480563 None:intergenic 15.0%
!! CTATTGAAGATAAAAATAAT+TGG - chr8.3:33480497-33480516 None:intergenic 15.0%
!! GTAAAATATGCAAAATATTA+GGG - chr8.3:33482720-33482739 None:intergenic 15.0%
!! TATTTCAACTTATAATTGTT+CGG + chr8.3:33479359-33479378 MS.gene067939:intron 15.0%
!! TCTTGTATATTATAACAATT+TGG - chr8.3:33483381-33483400 None:intergenic 15.0%
!! TGAAAAAAAGAAACAAAAAA+GGG - chr8.3:33482545-33482564 None:intergenic 15.0%
!! TTAAAAATTGTTTATAAACG+TGG + chr8.3:33481854-33481873 MS.gene067939:intron 15.0%
!! TTTATACATATCAAGAAAAA+TGG - chr8.3:33481084-33481103 None:intergenic 15.0%
!!! AAAGTATCATTATTAAGTAT+TGG - chr8.3:33481029-33481048 None:intergenic 15.0%
!!! AATATTTTGTAACAAATCAA+TGG - chr8.3:33482126-33482145 None:intergenic 15.0%
!!! ATTTTTTACTTGTCATTTTA+AGG + chr8.3:33480885-33480904 MS.gene067939:intron 15.0%
!!! CAATGTTTTTAATTTTGTAT+TGG + chr8.3:33481267-33481286 MS.gene067939:intron 15.0%
!!! CATCTATTTTTTCTTAAAAA+AGG - chr8.3:33479147-33479166 None:intergenic 15.0%
!!! CTTTTTTAAGAAAAAATAGA+TGG + chr8.3:33479145-33479164 MS.gene067939:intron 15.0%
!!! TTTTATGTTTCTTTTCATTA+TGG + chr8.3:33479677-33479696 MS.gene067939:intron 15.0%
!!! TTTTGGCTTATATAAAATTA+CGG + chr8.3:33479846-33479865 MS.gene067939:intron 15.0%
!! AAAACATTGATGAAAATGAA+AGG - chr8.3:33481256-33481275 None:intergenic 20.0%
!! AAAACTAAGAAAAATACCAA+TGG - chr8.3:33479289-33479308 None:intergenic 20.0%
!! AAATTGCTTATAAATGTGAT+TGG - chr8.3:33481754-33481773 None:intergenic 20.0%
!! AACTTAACATAGATAGATAA+TGG + chr8.3:33479745-33479764 MS.gene067939:intron 20.0%
!! ACGAAAATTCTTAAATTGAT+TGG + chr8.3:33481186-33481205 MS.gene067939:intron 20.0%
!! ATTCTTAAATTGATTGGATT+TGG + chr8.3:33481192-33481211 MS.gene067939:intron 20.0%
!! GTATATTATAACAATTTGGA+CGG - chr8.3:33483377-33483396 None:intergenic 20.0%
!! GTGAAAAAAAGAAACAAAAA+AGG - chr8.3:33482546-33482565 None:intergenic 20.0%
!! GTTAAATAAGAGAAAAATGA+AGG - chr8.3:33482693-33482712 None:intergenic 20.0%
!! TATCAAGAAAAATGGATAAA+TGG - chr8.3:33481076-33481095 None:intergenic 20.0%
!! TCATTAAGCTAATATCAAAT+TGG - chr8.3:33481630-33481649 None:intergenic 20.0%
!!! AAATCAATGGTTAGTTAATT+TGG - chr8.3:33482113-33482132 None:intergenic 20.0%
!!! AAATGGTCAAATTTCTTTTA+CGG - chr8.3:33479916-33479935 None:intergenic 20.0%
!!! AACAATTAATTTGGAAAGAA+GGG + chr8.3:33481116-33481135 MS.gene067939:intron 20.0%
!!! AGTTTAAGTAATTTTTATGC+AGG + chr8.3:33481302-33481321 MS.gene067939:intron 20.0%
!!! ATAAAGTACTAACAACAAAT+TGG + chr8.3:33480582-33480601 MS.gene067939:intron 20.0%
!!! ATCTATGTTAAGTTGTTTTT+TGG - chr8.3:33479739-33479758 None:intergenic 20.0%
!!! ATTTTACGTTAAATGTGTTT+TGG + chr8.3:33479829-33479848 MS.gene067939:intron 20.0%
!!! TCATTATTAAGTATTGGATT+TGG - chr8.3:33481023-33481042 None:intergenic 20.0%
!!! TCTATGTTAAGTTGTTTTTT+GGG - chr8.3:33479738-33479757 None:intergenic 20.0%
!!! TCTTCTTTTATTCTTCTAAT+CGG - chr8.3:33479501-33479520 None:intergenic 20.0%
! AAAATGACCTAGAAGATTAT+GGG + chr8.3:33481680-33481699 MS.gene067939:intron 25.0%
! AAAATTGAAACGTGTTAGAA+TGG + chr8.3:33479560-33479579 MS.gene067939:CDS 25.0%
! AACATAAATGACACACAAAA+GGG + chr8.3:33482343-33482362 MS.gene067939:intron 25.0%
! AAGTAAATTGATTGAAGCAA+GGG + chr8.3:33481380-33481399 MS.gene067939:intron 25.0%
! AATGACAAGTAAAAAATGAG+TGG - chr8.3:33480882-33480901 None:intergenic 25.0%
! AGTAGTAAAGTGAGTAAATA+TGG - chr8.3:33482426-33482445 None:intergenic 25.0%
! AGTCAAAAAGAAGAAAACAA+AGG - chr8.3:33482757-33482776 None:intergenic 25.0%
! ATACAAGAAGGAACTAATAA+TGG + chr8.3:33483393-33483412 MS.gene067939:CDS 25.0%
! ATGACAAGTAAAAAATGAGT+GGG - chr8.3:33480881-33480900 None:intergenic 25.0%
! ATTTACTCACTTTACTACTT+TGG + chr8.3:33482427-33482446 MS.gene067939:intron 25.0%
! CTTCTCAGTTTATTAATATG+TGG + chr8.3:33480470-33480489 MS.gene067939:intron 25.0%
! GAAAATTTAAGCTGAAAATG+TGG + chr8.3:33482172-33482191 MS.gene067939:intron 25.0%
! GTACCATTGAAAGTTTATTA+GGG + chr8.3:33482857-33482876 MS.gene067939:intron 25.0%
! GTTCAAATGTTAGTGAATTT+AGG + chr8.3:33482398-33482417 MS.gene067939:intron 25.0%
! TAAGTAAATTGATTGAAGCA+AGG + chr8.3:33481379-33481398 MS.gene067939:intron 25.0%
! TACAAGAAGGAACTAATAAT+GGG + chr8.3:33483394-33483413 MS.gene067939:CDS 25.0%
! TGACCACTTTAAATTGAAAA+AGG - chr8.3:33480430-33480449 None:intergenic 25.0%
! TGTACCATTGAAAGTTTATT+AGG + chr8.3:33482856-33482875 MS.gene067939:intron 25.0%
! TTACCCTAATAAACTTTCAA+TGG - chr8.3:33482863-33482882 None:intergenic 25.0%
!! AATAATCTCATTGACTAAAC+TGG - chr8.3:33482020-33482039 None:intergenic 25.0%
!! CTTTTCATTATGGTAAAGTA+TGG + chr8.3:33479687-33479706 MS.gene067939:intron 25.0%
!! GAAAGAGATAAAAAGCATAA+GGG - chr8.3:33482492-33482511 None:intergenic 25.0%
!! GAACAATTAATTTGGAAAGA+AGG + chr8.3:33481115-33481134 MS.gene067939:intron 25.0%
!! TGAAAGAGATAAAAAGCATA+AGG - chr8.3:33482493-33482512 None:intergenic 25.0%
!! TTGATATTAGCTTAATGATC+TGG + chr8.3:33481632-33481651 MS.gene067939:CDS 25.0%
!!! AGTCCTTTTTCAATTTAAAG+TGG + chr8.3:33480424-33480443 MS.gene067939:intron 25.0%
!!! CATAGATAGATAATGGAAAT+TGG + chr8.3:33479752-33479771 MS.gene067939:intron 25.0%
!!! CATATGGTAGTATTTTTTGA+GGG + chr8.3:33479780-33479799 MS.gene067939:intron 25.0%
!!! GATTTGGTTTTGCATTAAAT+AGG + chr8.3:33481208-33481227 MS.gene067939:intron 25.0%
!!! TCATACACACATTTAATTTG+AGG - chr8.3:33482894-33482913 None:intergenic 25.0%
AAAAGCTAGCATAAATGTGT+GGG + chr8.3:33480666-33480685 MS.gene067939:CDS 30.0%
AAAGTGGTCACTAAATTTCA+TGG + chr8.3:33480440-33480459 MS.gene067939:intron 30.0%
AATTCAGCTTGTCTCAAATA+TGG + chr8.3:33480713-33480732 MS.gene067939:CDS 30.0%
ACATAAATGACACACAAAAG+GGG + chr8.3:33482344-33482363 MS.gene067939:intron 30.0%
ACTAGCAGTAATATTGCAAT+TGG + chr8.3:33481568-33481587 MS.gene067939:CDS 30.0%
AGTAAATACCAGTAGAAACT+TGG - chr8.3:33481725-33481744 None:intergenic 30.0%
ATCCTTTAAGTGTGTGAATA+AGG - chr8.3:33483163-33483182 None:intergenic 30.0%
ATGGAAATTGGTAAAGCATA+TGG + chr8.3:33479764-33479783 MS.gene067939:intron 30.0%
ATGGATCTGGAAACTTAATT+GGG + chr8.3:33483124-33483143 MS.gene067939:CDS 30.0%
CAAAATGACCTAGAAGATTA+TGG + chr8.3:33481679-33481698 MS.gene067939:intron 30.0%
CAAATTACCCATAATCTTCT+AGG - chr8.3:33481690-33481709 None:intergenic 30.0%
CTAGAAGATTATGGGTAATT+TGG + chr8.3:33481688-33481707 MS.gene067939:intron 30.0%
CTTTAAGTCGTAAAAAGCAA+AGG - chr8.3:33482633-33482652 None:intergenic 30.0%
GAACATAAATGACACACAAA+AGG + chr8.3:33482342-33482361 MS.gene067939:intron 30.0%
TAATGAGACTTCCAAACTAA+TGG - chr8.3:33482226-33482245 None:intergenic 30.0%
TAGAATTGTAGAAGAAGCAA+GGG + chr8.3:33482271-33482290 MS.gene067939:intron 30.0%
TAGATTCTTCACTTATTGGA+CGG + chr8.3:33481356-33481375 MS.gene067939:CDS 30.0%
TATGGATCTGGAAACTTAAT+TGG + chr8.3:33483123-33483142 MS.gene067939:CDS 30.0%
TCCAATAAGTGAAGAATCTA+GGG - chr8.3:33481356-33481375 None:intergenic 30.0%
TCTCCAACTTCTACATATAA+TGG + chr8.3:33481601-33481620 MS.gene067939:CDS 30.0%
TGAAGGAATAAAAAAAGGTG+TGG - chr8.3:33482676-33482695 None:intergenic 30.0%
TGATGAAAATGAAAGGTAGT+TGG - chr8.3:33481249-33481268 None:intergenic 30.0%
TGGCTTATATAAAATTACGG+TGG + chr8.3:33479849-33479868 MS.gene067939:intron 30.0%
TGTATTAATGTGAGACTACA+AGG - chr8.3:33480297-33480316 None:intergenic 30.0%
TTAGCTACAACATTGAGATT+TGG - chr8.3:33483354-33483373 None:intergenic 30.0%
TTATATAACCACATCGAACA+CGG - chr8.3:33482928-33482947 None:intergenic 30.0%
TTCCTTATTCACACACTTAA+AGG + chr8.3:33483158-33483177 MS.gene067939:CDS 30.0%
TTGCTTATAAATGTGATTGG+AGG - chr8.3:33481751-33481770 None:intergenic 30.0%
! AGACTAACTTTTCTTTTGGA+AGG - chr8.3:33479893-33479912 None:intergenic 30.0%
! CATAATCTTCTAGGTCATTT+TGG - chr8.3:33481681-33481700 None:intergenic 30.0%
! TATTAGCTTAATGATCTGGA+AGG + chr8.3:33481636-33481655 MS.gene067939:CDS 30.0%
!! GGAAATTACTTTTACTATGG+TGG + chr8.3:33483420-33483439 MS.gene067939:CDS 30.0%
!! TGGGGAAATTACTTTTACTA+TGG + chr8.3:33483417-33483436 MS.gene067939:CDS 30.0%
!! TTGTTCGGTTTTATGTGTAT+AGG + chr8.3:33479374-33479393 MS.gene067939:intron 30.0%
!!! GCATATGGTAGTATTTTTTG+AGG + chr8.3:33479779-33479798 MS.gene067939:intron 30.0%
!!! GTGATTTTAGCTCTTACATA+AGG + chr8.3:33479963-33479982 MS.gene067939:intron 30.0%
!!! TTGGTTTTGCATTAAATAGG+CGG + chr8.3:33481211-33481230 MS.gene067939:intron 30.0%
!!! TTTGCACTGCTTTTTTTAGT+AGG + chr8.3:33480851-33480870 MS.gene067939:intron 30.0%
!!! TTTTTTGAGGGTAAAGCATA+TGG + chr8.3:33479792-33479811 MS.gene067939:intron 30.0%
AAAATGTCCACTACCCATTT+GGG - chr8.3:33483253-33483272 None:intergenic 35.0%
AAATACCAGTAGAAACTTGG+AGG - chr8.3:33481722-33481741 None:intergenic 35.0%
AAGTGTGTGAATAAGGAAGA+TGG - chr8.3:33483156-33483175 None:intergenic 35.0%
AATACCAGTAGAAACTTGGA+GGG - chr8.3:33481721-33481740 None:intergenic 35.0%
ACAACATTGAGATTTGGCAA+GGG - chr8.3:33483348-33483367 None:intergenic 35.0%
ACCCTAGATTCTTCACTTAT+TGG + chr8.3:33481352-33481371 MS.gene067939:CDS 35.0%
AGTGCAACTATGGTTCAATT+TGG + chr8.3:33483183-33483202 MS.gene067939:CDS 35.0%
ATAGTGAACACAATGTCAAC+AGG + chr8.3:33483213-33483232 MS.gene067939:CDS 35.0%
ATTAATGTGAGACTACAAGG+AGG - chr8.3:33480294-33480313 None:intergenic 35.0%
CAAAAGCTAGCATAAATGTG+TGG + chr8.3:33480665-33480684 MS.gene067939:CDS 35.0%
CAATCTATGATATCACCATC+AGG - chr8.3:33479211-33479230 None:intergenic 35.0%
CCAACTTCTACATATAATGG+AGG + chr8.3:33481604-33481623 MS.gene067939:CDS 35.0%
CCTCCATTATATGTAGAAGT+TGG - chr8.3:33481607-33481626 None:intergenic 35.0%
CTCAACTTTAGTGTTCTGTA+TGG + chr8.3:33482992-33483011 MS.gene067939:intron 35.0%
CTGGAAACTTAATTGGGTAT+TGG + chr8.3:33483130-33483149 MS.gene067939:CDS 35.0%
CTTAAAGGATAGTGCAACTA+TGG + chr8.3:33483173-33483192 MS.gene067939:CDS 35.0%
GCTTGCTCTATTAACACATT+TGG + chr8.3:33479534-33479553 MS.gene067939:CDS 35.0%
GTAGAATTGTAGAAGAAGCA+AGG + chr8.3:33482270-33482289 MS.gene067939:intron 35.0%
GTCCAATAAGTGAAGAATCT+AGG - chr8.3:33481357-33481376 None:intergenic 35.0%
TAAATTGATTGAAGCAAGGG+AGG + chr8.3:33481383-33481402 MS.gene067939:intron 35.0%
TACAACATTGAGATTTGGCA+AGG - chr8.3:33483349-33483368 None:intergenic 35.0%
TAGTGAACACAATGTCAACA+GGG + chr8.3:33483214-33483233 MS.gene067939:CDS 35.0%
TCTCAAATATGGATCATCTC+TGG + chr8.3:33480724-33480743 MS.gene067939:CDS 35.0%
TCTCATACTCAAAGTCTCAA+AGG + chr8.3:33482150-33482169 MS.gene067939:intron 35.0%
TGAGACAAGCTGAATTCATA+TGG - chr8.3:33480709-33480728 None:intergenic 35.0%
TGCTACAATTTACTTTGCTC+TGG + chr8.3:33481535-33481554 MS.gene067939:CDS 35.0%
TTGCAAAAGCTGCATACTTT+AGG + chr8.3:33483286-33483305 MS.gene067939:CDS 35.0%
TTGCTTCTATTTATGCGTGT+AGG + chr8.3:33483071-33483090 MS.gene067939:intron 35.0%
TTTATGTGTATAGGATCCTC+CGG + chr8.3:33479383-33479402 MS.gene067939:intron 35.0%
TTTCAATTGTGGAGTTTCTC+AGG + chr8.3:33479450-33479469 MS.gene067939:CDS 35.0%
! AAAGTGCTCAGAAAGAATGA+GGG - chr8.3:33482596-33482615 None:intergenic 35.0%
! AAGAAGGAACTAATAATGGG+TGG + chr8.3:33483397-33483416 MS.gene067939:CDS 35.0%
! ACGGAGACTAACTTTTCTTT+TGG - chr8.3:33479897-33479916 None:intergenic 35.0%
! CTTTAGGAATATGCAAGTTG+TGG + chr8.3:33483302-33483321 MS.gene067939:CDS 35.0%
!! AGAAGAAAACAAAGGTACCA+AGG - chr8.3:33482749-33482768 None:intergenic 35.0%
!! AGAAGGAACTAATAATGGGT+GGG + chr8.3:33483398-33483417 MS.gene067939:CDS 35.0%
!!! GTTTCTGTTGTTTTCTGTGA+TGG - chr8.3:33479617-33479636 None:intergenic 35.0%
AACATAGGATGGTCAAAAGC+TGG - chr8.3:33479253-33479272 None:intergenic 40.0%
ACCTGAATTGTCTTAACAGC+AGG - chr8.3:33479093-33479112 None:intergenic 40.0%
ACTGATGCATATCAAGGAAC+TGG + chr8.3:33481511-33481530 MS.gene067939:CDS 40.0%
AGTGAACACAATGTCAACAG+GGG + chr8.3:33483215-33483234 MS.gene067939:CDS 40.0%
ATATCCCTCCAAGTTTCTAC+TGG + chr8.3:33481714-33481733 MS.gene067939:intron 40.0%
ATGCAGTTGGATATGTGAGT+GGG + chr8.3:33480626-33480645 MS.gene067939:CDS 40.0%
CAAAATGTCCACTACCCATT+TGG - chr8.3:33483254-33483273 None:intergenic 40.0%
CTGATGCATATCAAGGAACT+GGG + chr8.3:33481512-33481531 MS.gene067939:CDS 40.0%
GATCTCAATACCATTGAAGC+TGG + chr8.3:33480760-33480779 MS.gene067939:CDS 40.0%
GCAACTATGGTTCAATTTGG+TGG + chr8.3:33483186-33483205 MS.gene067939:CDS 40.0%
GTTGAGAGGACAAAAACCAT+TGG + chr8.3:33479270-33479289 MS.gene067939:CDS 40.0%
TCAATACCATTGAAGCTGGT+TGG + chr8.3:33480764-33480783 MS.gene067939:CDS 40.0%
TGTTTATAAACGTGGCACGA+TGG + chr8.3:33481862-33481881 MS.gene067939:intron 40.0%
TTGCAGACTGATGCATATCA+AGG + chr8.3:33481505-33481524 MS.gene067939:intron 40.0%
TTTGACCATCCTATGTTGAG+AGG + chr8.3:33479256-33479275 MS.gene067939:CDS 40.0%
TTTGTCCTCTCAACATAGGA+TGG - chr8.3:33479264-33479283 None:intergenic 40.0%
! ACCAAGAGAGCATAAGCAAA+TGG + chr8.3:33479410-33479429 MS.gene067939:CDS 40.0%
! AGTGGACATTTTGCTGAAGA+AGG + chr8.3:33483261-33483280 MS.gene067939:CDS 40.0%
! CAAAGTGCTCAGAAAGAATG+AGG - chr8.3:33482597-33482616 None:intergenic 40.0%
! CCAAGAGAGCATAAGCAAAT+GGG + chr8.3:33479411-33479430 MS.gene067939:CDS 40.0%
! GCATATTTTACTCACCACCT+TGG + chr8.3:33482729-33482748 MS.gene067939:intron 40.0%
! GGACATTTTACATTCCTTCC+AGG - chr8.3:33483447-33483466 None:intergenic 40.0%
! GGTTTTTGTCCTCTCAACAT+AGG - chr8.3:33479268-33479287 None:intergenic 40.0%
! TACTTTTACTATGGTGGTCC+TGG + chr8.3:33483426-33483445 MS.gene067939:CDS 40.0%
! TGGATCATCTCTGGTTCATT+TGG + chr8.3:33480733-33480752 MS.gene067939:CDS 40.0%
!! AGAAAACAAAGGTACCAAGG+TGG - chr8.3:33482746-33482765 None:intergenic 40.0%
!! GAAGGAACTAATAATGGGTG+GGG + chr8.3:33483399-33483418 MS.gene067939:CDS 40.0%
AAAATGTGGCCAATGCATGG+TGG + chr8.3:33482186-33482205 MS.gene067939:intron 45.0%
AAATGTGGCCAATGCATGGT+GGG + chr8.3:33482187-33482206 MS.gene067939:intron 45.0%
AATGATGCACAGCATGCAGT+TGG + chr8.3:33480613-33480632 MS.gene067939:intron 45.0%
ACATATGTCCGTGTTCGATG+TGG + chr8.3:33482917-33482936 MS.gene067939:intron 45.0%
ACATCAACCCAAATGGGTAG+TGG + chr8.3:33483243-33483262 MS.gene067939:CDS 45.0%
AGGATCCAAAGCATGGGAAT+TGG + chr8.3:33483091-33483110 MS.gene067939:intron 45.0%
AGGTGTGGCGTTCAGAATTA+TGG - chr8.3:33482661-33482680 None:intergenic 45.0%
ATATCACCATCAGGACTCTG+CGG - chr8.3:33479202-33479221 None:intergenic 45.0%
ATCCAAAGCATGGGAATTGG+TGG + chr8.3:33483094-33483113 MS.gene067939:CDS 45.0%
ATTGATTGAAGCAAGGGAGG+TGG + chr8.3:33481386-33481405 MS.gene067939:intron 45.0%
CATATGGACTTTCCACCTGT+GGG - chr8.3:33480693-33480712 None:intergenic 45.0%
CATGCAGTTGGATATGTGAG+TGG + chr8.3:33480625-33480644 MS.gene067939:CDS 45.0%
CCCATTTGCTTATGCTCTCT+TGG - chr8.3:33479414-33479433 None:intergenic 45.0%
CTAATCGGAATCGTTCCTTC+TGG - chr8.3:33479486-33479505 None:intergenic 45.0%
CTGAAAATGTGGCCAATGCA+TGG + chr8.3:33482183-33482202 MS.gene067939:intron 45.0%
GCCTGCTGTTAAGACAATTC+AGG + chr8.3:33479089-33479108 MS.gene067939:CDS 45.0%
GCTCACACATCAACCCAAAT+GGG + chr8.3:33483237-33483256 MS.gene067939:CDS 45.0%
GTGAGTGGGAATGAGTACTA+TGG + chr8.3:33480640-33480659 MS.gene067939:CDS 45.0%
TCAGGTGAATCATGTCCAGA+AGG + chr8.3:33479468-33479487 MS.gene067939:CDS 45.0%
TCATATGGACTTTCCACCTG+TGG - chr8.3:33480694-33480713 None:intergenic 45.0%
TGGTGGCTAGAATATGGATC+TGG + chr8.3:33483111-33483130 MS.gene067939:CDS 45.0%
TGTGAGACTACAAGGAGGAT+TGG - chr8.3:33480289-33480308 None:intergenic 45.0%
TTATGCTCTCTTGGTCTCTC+CGG - chr8.3:33479405-33479424 None:intergenic 45.0%
TTTACTATGGTGGTCCTGGA+AGG + chr8.3:33483430-33483449 MS.gene067939:CDS 45.0%
! AGACTACAAGGAGGATTGGT+TGG - chr8.3:33480285-33480304 None:intergenic 45.0%
! CTCATTGACTAAACTGGCAC+AGG - chr8.3:33482014-33482033 None:intergenic 45.0%
! GGGAATTGGTGGCTAGAATA+TGG + chr8.3:33483105-33483124 MS.gene067939:CDS 45.0%
!!! TTAATACATTTTTTATTAAT+GGG - chr8.3:33481460-33481479 None:intergenic 5.0%
!!! TTTAATACATTTTTTATTAA+TGG - chr8.3:33481461-33481480 None:intergenic 5.0%
AATGTGGCCAATGCATGGTG+GGG + chr8.3:33482188-33482207 MS.gene067939:intron 50.0%
AGCCACCAATTCCCATGCTT+TGG - chr8.3:33483099-33483118 None:intergenic 50.0%
AGCTATCCCCATAGAGCTCT+GGG - chr8.3:33481332-33481351 None:intergenic 50.0%
CATAAATGTGTGGGTCCCAC+AGG + chr8.3:33480675-33480694 MS.gene067939:CDS 50.0%
CGTGTTAGAATGGACACCAC+CGG + chr8.3:33479570-33479589 MS.gene067939:CDS 50.0%
GCGTGTAGGATCCAAAGCAT+GGG + chr8.3:33483085-33483104 MS.gene067939:intron 50.0%
GGCTCACACATCAACCCAAA+TGG + chr8.3:33483236-33483255 MS.gene067939:CDS 50.0%
TACCATTGAAGCTGGTTGGC+AGG + chr8.3:33480768-33480787 MS.gene067939:CDS 50.0%
TAGCTATCCCCATAGAGCTC+TGG - chr8.3:33481333-33481352 None:intergenic 50.0%
TGCGTGTAGGATCCAAAGCA+TGG + chr8.3:33483084-33483103 MS.gene067939:intron 50.0%
TTGTACCTCATGTCCATCGC+CGG - chr8.3:33479592-33479611 None:intergenic 50.0%
! CATGGGGCACTCCATTAGTT+TGG + chr8.3:33482212-33482231 MS.gene067939:intron 50.0%
! GTTTTTCCGCAGAGTCCTGA+TGG + chr8.3:33479193-33479212 MS.gene067939:intron 50.0%
AAATGTGTGGGTCCCACAGG+TGG + chr8.3:33480678-33480697 MS.gene067939:CDS 55.0%
AGGTCAGCCCAGAGCTCTAT+GGG + chr8.3:33481322-33481341 MS.gene067939:intron 55.0%
ATGTGGCCAATGCATGGTGG+GGG + chr8.3:33482189-33482208 MS.gene067939:intron 55.0%
TGCCTGCCAACCAGCTTCAA+TGG - chr8.3:33480773-33480792 None:intergenic 55.0%
AGAATGGACACCACCGGCGA+TGG + chr8.3:33479576-33479595 MS.gene067939:CDS 60.0%
CAGGTCAGCCCAGAGCTCTA+TGG + chr8.3:33481321-33481340 MS.gene067939:intron 60.0%
GGTCAGCCCAGAGCTCTATG+GGG + chr8.3:33481323-33481342 MS.gene067939:intron 60.0%
TACCTCATGTCCATCGCCGG+TGG - chr8.3:33479589-33479608 None:intergenic 60.0%
TGCTCTCTTGGTCTCTCCGG+AGG - chr8.3:33479402-33479421 None:intergenic 60.0%
! CAATGCATGGTGGGGGCATG+GGG + chr8.3:33482196-33482215 MS.gene067939:intron 60.0%
! CCAATGCATGGTGGGGGCAT+GGG + chr8.3:33482195-33482214 MS.gene067939:intron 60.0%
CACCACCGGCGATGGACATG+AGG + chr8.3:33479584-33479603 MS.gene067939:CDS 65.0%
CCCATGCCCCCACCATGCAT+TGG - chr8.3:33482198-33482217 None:intergenic 65.0%
TGTGTGTGCGCGCGCACGTT+TGG + chr8.3:33483022-33483041 MS.gene067939:intron 65.0%
! GCCAATGCATGGTGGGGGCA+TGG + chr8.3:33482194-33482213 MS.gene067939:intron 65.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 33479066 33483470 33479066 ID=MS.gene067939
chr8.3 mRNA 33479066 33483470 33479066 ID=MS.gene067939.t1;Parent=MS.gene067939
chr8.3 exon 33479066 33479110 33479066 ID=MS.gene067939.t1.exon1;Parent=MS.gene067939.t1
chr8.3 CDS 33479066 33479110 33479066 ID=cds.MS.gene067939.t1;Parent=MS.gene067939.t1
chr8.3 exon 33479205 33479291 33479205 ID=MS.gene067939.t1.exon2;Parent=MS.gene067939.t1
chr8.3 CDS 33479205 33479291 33479205 ID=cds.MS.gene067939.t1;Parent=MS.gene067939.t1
chr8.3 exon 33479396 33479605 33479396 ID=MS.gene067939.t1.exon3;Parent=MS.gene067939.t1
chr8.3 CDS 33479396 33479605 33479396 ID=cds.MS.gene067939.t1;Parent=MS.gene067939.t1
chr8.3 exon 33480625 33480789 33480625 ID=MS.gene067939.t1.exon4;Parent=MS.gene067939.t1
chr8.3 CDS 33480625 33480789 33480625 ID=cds.MS.gene067939.t1;Parent=MS.gene067939.t1
chr8.3 exon 33481324 33481377 33481324 ID=MS.gene067939.t1.exon5;Parent=MS.gene067939.t1
chr8.3 CDS 33481324 33481377 33481324 ID=cds.MS.gene067939.t1;Parent=MS.gene067939.t1
chr8.3 exon 33481511 33481657 33481511 ID=MS.gene067939.t1.exon6;Parent=MS.gene067939.t1
chr8.3 CDS 33481511 33481657 33481511 ID=cds.MS.gene067939.t1;Parent=MS.gene067939.t1
chr8.3 exon 33483093 33483470 33483093 ID=MS.gene067939.t1.exon7;Parent=MS.gene067939.t1
chr8.3 CDS 33483093 33483470 33483093 ID=cds.MS.gene067939.t1;Parent=MS.gene067939.t1
Gene Sequence

>MS.gene067939

ATGCATCTTCGACGGATCAACAAGCCTGCTGTTAAGACAATTCAGGTATGTTAAAAATGTCTTCAAAACATTTCTCAACCTTTTTTAAGAAAAAATAGATGGTGTTTGTGTAATGTGTGTTTGTGTTGTTTTTCCGCAGAGTCCTGATGGTGATATCATAGATTGTGTTATGTCTCATAGACAACCAGCTTTTGACCATCCTATGTTGAGAGGACAAAAACCATTGGTATTTTTCTTAGTTTTTTTTCTCTATTGAGTGAAAATTAAAATAAAAAATTTCTTTTATATAATTATATTTCAACTTATAATTGTTCGGTTTTATGTGTATAGGATCCTCCGGAGAGACCAAGAGAGCATAAGCAAATGGGCATTGAAAATTATAACTTTCAATTGTGGAGTTTCTCAGGTGAATCATGTCCAGAAGGAACGATTCCGATTAGAAGAATAAAAGAAGATGACATGTTAAGAGCTTGCTCTATTAACACATTTGGAAGAAAATTGAAACGTGTTAGAATGGACACCACCGGCGATGGACATGAGGTACAATGCCATCACAGAAAACAACAGAAACTCAGATTATTTTGTCTCATAATTTCTTTTATATTATATATTTTTATGTTTCTTTTCATTATGGTAAAGTATGGAATAAATAAACAACTTAAGAGATAACCCAAAAAACAACTTAACATAGATAGATAATGGAAATTGGTAAAGCATATGGTAGTATTTTTTGAGGGTAAAGCATATGGTAGTTGAGTATTTAATTTTACGTTAAATGTGTTTTGGCTTATATAAAATTACGGTGGTAAGTTTAGTCTTTATAGCCTTCCAAAAGAAAAGTTAGTCTCCGTAAAAGAAATTTGACCATTTTTGTCTATATTTTCTTTATAAGAACTTGTGATTTTAGCTCTTACATAAGGACTAAAGTATGTATTAAATTTTATAAAAAATAAAGATTAAAAATTGTTCAAAAAGATTTTTTTTTTTTTGAAACAGTTCAAAAAGAATTTATAAAGACTAAAACAATTGTTTATATTTTATAAGTTACAAAAACATATGTATCCATTCATTTCTTTTGAAATAATTAATATCGGTCATAAAAGAGAAATTCCAAATGTTTTCTTTTTCTTTTTATACTATATTTTTTTAAAAATTTAGAAGTATGAAAATGAAGATAGTACGATTAGCACAAAAAAATTGAAAATGATCTGTAGTACCAACCAATCCTCCTTGTAGTCTCACATTAATACAAACAAAATAATATTATGATAACTTCTTCCAAAAATAATATTCTGATAAAAGCATAATAGACAAGTGTTCTTTTTTTTTTTTGTCTTTCTAATTTACTCATGAAGCTAAGTCCTTTTTCAATTTAAAGTGGTCACTAAATTTCATGGTTACTCACTTCTCAGTTTATTAATATGTGGACCAATTATTTTTATCTTCAATAGAAATAATCTTAGACACAACAAAAACCAACATTGAATCTAATATAAATCTTGTGCTATTTTTGAAAATAAAGTACTAACAACAAATTGGTTCTTCTTAATGATGCACAGCATGCAGTTGGATATGTGAGTGGGAATGAGTACTATGGAGCAAAAGCTAGCATAAATGTGTGGGTCCCACAGGTGGAAAGTCCATATGAATTCAGCTTGTCTCAAATATGGATCATCTCTGGTTCATTTGGAGTAGATCTCAATACCATTGAAGCTGGTTGGCAGGCATGTTGATTATTTTCATTAATTACTTCATCTTAGACAATCAATTCATTCAATCACTTCTTTTGCACTGCTTTTTTTAGTAGGTACTCCCACTCATTTTTTACTTGTCATTTTAAGGTTACGTGTATTTCATACGTCTCAAAATAAGTGACATTGTAGACAGTTGCACATAGATATTTTTGACATTTAATATTTTTGATTATGTATTAGTAAAAATTATAAATGCAAAACCAAATCCAATACTTAATAATGATACTTTAATAAAAATGATGTTATCTCTTTTCCATTTATCCATTTTTCTTGATATGTATAAAATGAACAAATAGAACAATTAATTTGGAAAGAAGGGAGTATATTTTATTAATCTTTTACACAATTTTTTTAAACTAATTTTACACGAAAATTCTTAAATTGATTGGATTTGGTTTTGCATTAAATAGGCGGTTAGAATGTCAACCAACTACCTTTCATTTTCATCAATGTTTTTAATTTTGTATTGGTCAATCAAGCTAAGTTTAAGTAATTTTTATGCAGGTCAGCCCAGAGCTCTATGGGGATAGCTACCCTAGATTCTTCACTTATTGGACGGTAAGTAAATTGATTGAAGCAAGGGAGGTGGAAAAGTAAAATATCTATGATTGATACTACTTGCTTCAAGTGTAAGATACCCATTAATAAAAAATGTATTAAAAAAAATGATAATGGCTAGTAATAATTGCAGACTGATGCATATCAAGGAACTGGGTGCTACAATTTACTTTGCTCTGGCTTTGTTCAAACTAGCAGTAATATTGCAATTGGAGCAGCAATTTCTCCAACTTCTACATATAATGGAGGCCAATTTGATATTAGCTTAATGATCTGGAAGGTAATTTTCTGCTCAGAATACCAAAATGACCTAGAAGATTATGGGTAATTTGGTATATATCCCTCCAAGTTTCTACTGGTATTTACTACTCCTCCAATCACATTTATAAGCAATTTTTTTTAAATTTATTAAATAACTGATGTATCTAGATTATAATATAGTCTAGATACATCTGTTATTTAATGAATGTGAAAAATTAAAAATTGTTTATAAACGTGGCACGATGGAGTACTTATTTTCAATAATAATACAGCTTCAAATATGTAAAATAAGTCAATTTAGTTACTAAAGTTAAAACAAAATAAAATAGTTCTTCGAAATAAAAAAATTTCAATTAATTAATTATAATTATTCCTGTGCCAGTTTAGTCAATGAGATTATTGCATATTGACAAATGTGATTAGAAACTTTTAGTTTTTAAGAACATCTGAATATTTTTTTAACTTCAATAACCAAATTAACTAACCATTGATTTGTTACAAAATATTGAAGTCTCATACTCAAAGTCTCAAAGGAAAATTTAAGCTGAAAATGTGGCCAATGCATGGTGGGGGCATGGGGCACTCCATTAGTTTGGAAGTCTCATTATATGCTTTCGAATTTTGTTATTATGTAGAATTGTAGAAGAAGCAAGGGCAAGTTTATTATAACATGTTCACAACATAATAATTTGTTTTGAAAAAGGAACATAAATGACACACAAAAGGGGAAAAACAATATAATGAACAAAATTTTCTAGTGTTCAAATGTTAGTGAATTTAGGTACCATATTTACTCACTTTACTACTTTGGTACATTACACGCATGCACTGTGTGAATTTGAATGTAACTCCCTTATGCTTTTTATCTCTTTCAAGATTCTTTTTCTTTATTCTTTTTTCTTTCCCTTTTTTGTTTCTTTTTTTCACCACATAATTTATCACATTTTTTACTTTCCCTCATTCTTTCTGAGCACTTTGAGAACATCATTTTCCTTTGCTTTTTACGACTTAAAGATATTCCATAATTCTGAACGCCACACCTTTTTTTATTCCTTCATTTTTCTCTTATTTAACAAAACCCTAATATTTTGCATATTTTACTCACCACCTTGGTACCTTTGTTTTCTTCTTTTTGACTCATTTCTCTTATCATGTCAGCTAACATGTTGCTCTTAATGATTATGTTTGAGTAATTTAACTTTGTCAAAAAAAAATATTGTACCATTGAAAGTTTATTAGGGTAATATTGATACCTCAAATTAAATGTGTGTATGATTAACATATGTCCGTGTTCGATGTGGTTATATAAATTCAGTTACTTCTATTTTTTTAAACTATTAAAAATGTCTATATCTCAACTTTAGTGTTCTGTATGGTGTTTTTTGTGTGTGCGCGCGCACGTTTGGTGTTTGTGTTTCATGTATAGTTTACTTTGCTTCTATTTATGCGTGTAGGATCCAAAGCATGGGAATTGGTGGCTAGAATATGGATCTGGAAACTTAATTGGGTATTGGCCATCTTCCTTATTCACACACTTAAAGGATAGTGCAACTATGGTTCAATTTGGTGGAGAAATAGTGAACACAATGTCAACAGGGGCTCACACATCAACCCAAATGGGTAGTGGACATTTTGCTGAAGAAGGTTTTGCAAAAGCTGCATACTTTAGGAATATGCAAGTTGTGGATTCTGATAACAGCTTGATTCCCTTGCCAAATCTCAATGTTGTAGCTAACCGTCCAAATTGTTATAATATACAAGAAGGAACTAATAATGGGTGGGGAAATTACTTTTACTATGGTGGTCCTGGAAGGAATGTAAAATGTCCCTAA
Protein sequence

>MS.gene067939.t1

MHLRRINKPAVKTIQSPDGDIIDCVMSHRQPAFDHPMLRGQKPLDPPERPREHKQMGIENYNFQLWSFSGESCPEGTIPIRRIKEDDMLRACSINTFGRKLKRVRMDTTGDGHEHAVGYVSGNEYYGAKASINVWVPQVESPYEFSLSQIWIISGSFGVDLNTIEAGWQVSPELYGDSYPRFFTYWTTDAYQGTGCYNLLCSGFVQTSSNIAIGAAISPTSTYNGGQFDISLMIWKDPKHGNWWLEYGSGNLIGYWPSSLFTHLKDSATMVQFGGEIVNTMSTGAHTSTQMGSGHFAEEGFAKAAYFRNMQVVDSDNSLIPLPNLNVVANRPNCYNIQEGTNNGWGNYFYYGGPGRNVKCP