Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067998.t1 | XP_003629017.2 | 98.1 | 979 | 18 | 1 | 1 | 979 | 1 | 978 | 0.00E+00 | 1830.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067998.t1 | Q8L7A9 | 70.5 | 981 | 244 | 11 | 1 | 979 | 1 | 938 | 0.0e+00 | 1273.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067998.t1 | G7L7U1 | 98.1 | 979 | 18 | 1 | 1 | 979 | 1 | 978 | 0.0e+00 | 1830.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene067998 | MS.gene40593 | PPI |
| MS.gene067998 | MS.gene32794 | PPI |
| MS.gene067998 | MS.gene014683 | PPI |
| MS.gene067998 | MS.gene031180 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067998.t1 | MTR_8g072250 | 98.059 | 979 | 18 | 1 | 1 | 979 | 1 | 978 | 0.0 | 1963 |
| MS.gene067998.t1 | MTR_5g034780 | 25.170 | 588 | 414 | 9 | 19 | 594 | 4 | 577 | 7.48e-59 | 218 |
| MS.gene067998.t1 | MTR_8g063690 | 24.329 | 596 | 409 | 9 | 19 | 594 | 4 | 577 | 7.66e-53 | 200 |
| MS.gene067998.t1 | MTR_2g084610 | 24.020 | 587 | 405 | 15 | 28 | 592 | 12 | 579 | 6.30e-51 | 195 |
| MS.gene067998.t1 | MTR_8g104380 | 26.110 | 383 | 258 | 7 | 27 | 407 | 20 | 379 | 1.01e-21 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067998.t1 | AT1G31730 | 69.929 | 981 | 250 | 12 | 1 | 979 | 1 | 938 | 0.0 | 1343 |
| MS.gene067998.t1 | AT1G60070 | 26.768 | 594 | 395 | 9 | 19 | 593 | 4 | 576 | 1.91e-63 | 231 |
| MS.gene067998.t1 | AT1G60070 | 26.768 | 594 | 395 | 9 | 19 | 593 | 4 | 576 | 4.82e-63 | 231 |
| MS.gene067998.t1 | AT1G23900 | 24.535 | 591 | 412 | 8 | 19 | 593 | 4 | 576 | 1.96e-55 | 208 |
| MS.gene067998.t1 | AT1G23900 | 24.535 | 591 | 412 | 8 | 19 | 593 | 4 | 576 | 1.96e-55 | 208 |
| MS.gene067998.t1 | AT1G23900 | 24.570 | 582 | 405 | 8 | 28 | 593 | 1 | 564 | 3.80e-54 | 204 |
| MS.gene067998.t1 | AT5G22770 | 26.304 | 460 | 316 | 10 | 65 | 511 | 48 | 497 | 1.40e-50 | 194 |
| MS.gene067998.t1 | AT5G22770 | 26.304 | 460 | 316 | 10 | 65 | 511 | 48 | 497 | 1.40e-50 | 194 |
| MS.gene067998.t1 | AT5G22770 | 26.304 | 460 | 316 | 10 | 65 | 511 | 48 | 497 | 1.40e-50 | 194 |
| MS.gene067998.t1 | AT5G22770 | 26.304 | 460 | 316 | 10 | 65 | 511 | 48 | 497 | 1.40e-50 | 194 |
| MS.gene067998.t1 | AT5G22770 | 26.304 | 460 | 316 | 10 | 65 | 511 | 48 | 497 | 1.40e-50 | 194 |
| MS.gene067998.t1 | AT5G22770 | 26.304 | 460 | 316 | 10 | 65 | 511 | 48 | 497 | 1.40e-50 | 194 |
| MS.gene067998.t1 | AT5G22780 | 25.138 | 545 | 368 | 14 | 65 | 588 | 48 | 573 | 1.72e-50 | 194 |
| MS.gene067998.t1 | AT5G22780 | 25.138 | 545 | 368 | 14 | 65 | 588 | 48 | 573 | 1.72e-50 | 194 |
| MS.gene067998.t1 | AT1G48760 | 25.257 | 487 | 310 | 13 | 41 | 510 | 31 | 480 | 1.01e-24 | 111 |
| MS.gene067998.t1 | AT1G48760 | 25.257 | 487 | 310 | 13 | 41 | 510 | 31 | 480 | 1.01e-24 | 111 |
| MS.gene067998.t1 | AT1G48760 | 25.257 | 487 | 310 | 13 | 41 | 510 | 31 | 480 | 1.01e-24 | 111 |
| MS.gene067998.t1 | AT1G23935 | 24.422 | 303 | 213 | 5 | 7 | 305 | 853 | 1143 | 2.05e-13 | 75.5 |
| MS.gene067998.t1 | AT1G23935 | 24.422 | 303 | 213 | 5 | 7 | 305 | 903 | 1193 | 2.20e-13 | 75.5 |
| MS.gene067998.t1 | AT1G23935 | 24.422 | 303 | 213 | 5 | 7 | 305 | 852 | 1142 | 2.36e-13 | 75.1 |
Find 232 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATGCCATTCACTGGATTT+TGG | 0.134245 | 8.3:+30754874 | None:intergenic |
| TACAAATGCACCTGATATTA+TGG | 0.160773 | 8.3:-30754460 | MS.gene067998:CDS |
| TATGAATTACAAGCTGTTAT+TGG | 0.204151 | 8.3:-30756552 | MS.gene067998:CDS |
| AGGTTATTTGTTGGGTTCTT+GGG | 0.216014 | 8.3:-30760837 | MS.gene067998:CDS |
| CCGTTATTGGCGATATAATT+AGG | 0.223296 | 8.3:-30763282 | MS.gene067998:CDS |
| CAGGTTATTTGTTGGGTTCT+TGG | 0.225264 | 8.3:-30760838 | MS.gene067998:CDS |
| CGATGATCCGATTCCGTATA+AGG | 0.231911 | 8.3:-30764662 | MS.gene067998:CDS |
| GAACACATGTACACCGTTAT+TGG | 0.232178 | 8.3:-30763295 | MS.gene067998:CDS |
| GTCCAGATTCTTGCTGATCT+TGG | 0.234688 | 8.3:+30755159 | None:intergenic |
| TGTTGGGTTCTTGGGGAATA+TGG | 0.245639 | 8.3:-30760829 | MS.gene067998:CDS |
| ACTCTTTCATCTTCCGTTTA+GGG | 0.247975 | 8.3:+30765148 | None:intergenic |
| CAAACTGCAGTGTCAATCTT+TGG | 0.260684 | 8.3:-30756622 | MS.gene067998:intron |
| GCTCTCCTCGGATGCTTTAA+TGG | 0.268566 | 8.3:+30754632 | None:intergenic |
| CAACTTGGGATTGGGATATA+TGG | 0.275024 | 8.3:+30763195 | None:intergenic |
| TGCTAATGCTAAAGATTCTT+TGG | 0.275970 | 8.3:-30754283 | MS.gene067998:CDS |
| TACTCTTTCATCTTCCGTTT+AGG | 0.276919 | 8.3:+30765147 | None:intergenic |
| ATCTTCCGTTTAGGGATATC+TGG | 0.279722 | 8.3:+30765156 | None:intergenic |
| CTCGGTCACGACGCTTCTTT+CGG | 0.282371 | 8.3:-30765096 | MS.gene067998:CDS |
| TGCCGTCATTGACTGCTTAG+AGG | 0.309383 | 8.3:-30762927 | MS.gene067998:intron |
| GATTCGGTCTTCTTCGGCTT+TGG | 0.319752 | 8.3:+30765221 | None:intergenic |
| AAGCTTGCCGCTTCATTGTT+TGG | 0.324600 | 8.3:-30754759 | MS.gene067998:CDS |
| GAGTCATATTTGCGCATTAT+TGG | 0.327916 | 8.3:-30760986 | MS.gene067998:CDS |
| GGATATCTGGTTCGGAGATT+CGG | 0.335176 | 8.3:+30765169 | None:intergenic |
| CACTGGGAAGTTATGCGATA+TGG | 0.347901 | 8.3:-30760773 | MS.gene067998:CDS |
| CTAGTTGATGTTCTTCTCTC+AGG | 0.348573 | 8.3:+30754723 | None:intergenic |
| CGGTTGATTGCAGAAGGATT+TGG | 0.350957 | 8.3:-30761152 | MS.gene067998:CDS |
| CTGATTACAGGTTATTTGTT+GGG | 0.351601 | 8.3:-30760845 | MS.gene067998:intron |
| CGCAGCAGCTTCTAACAACT+TGG | 0.351640 | 8.3:+30763180 | None:intergenic |
| GCAGCACCAACATTAGCTTT+TGG | 0.353994 | 8.3:+30754690 | None:intergenic |
| TCCACAAGATTTGCTTGACT+TGG | 0.356959 | 8.3:-30754592 | MS.gene067998:CDS |
| AGCCAAGATCAGCAAGAATC+TGG | 0.360813 | 8.3:-30755161 | MS.gene067998:CDS |
| GCTTCCATCAGTGTTTCTTC+AGG | 0.362276 | 8.3:-30760954 | MS.gene067998:intron |
| TGATAATGATCCTGGTGTTA+TGG | 0.371274 | 8.3:-30764719 | MS.gene067998:CDS |
| TTTGATGGCACAGGAGCCTT+TGG | 0.375463 | 8.3:+30755104 | None:intergenic |
| TGGAGATCTTGTGAATATTA+AGG | 0.376401 | 8.3:-30761192 | MS.gene067998:CDS |
| TACCTCAATGTCTTCGCAAC+TGG | 0.388904 | 8.3:+30756488 | None:intergenic |
| GCTGATTACAGGTTATTTGT+TGG | 0.389807 | 8.3:-30760846 | MS.gene067998:intron |
| CTCTCCTCGGATGCTTTAAT+GGG | 0.390827 | 8.3:+30754633 | None:intergenic |
| GATTACGATTCGGTCTTCTT+CGG | 0.392121 | 8.3:+30765215 | None:intergenic |
| ATTCACCGATTGATTTGATT+AGG | 0.392413 | 8.3:+30765250 | None:intergenic |
| TGGTGATAATCATAGCTCTT+AGG | 0.393881 | 8.3:+30764586 | None:intergenic |
| CTGAAAATTCTTGCATTGTT+GGG | 0.395186 | 8.3:-30763340 | MS.gene067998:CDS |
| CACTTCCACATTGGAAGACT+TGG | 0.396065 | 8.3:+30761458 | None:intergenic |
| GCATAACTTCCCAGTGATAT+AGG | 0.398047 | 8.3:+30760780 | None:intergenic |
| TCATCAGATACAGGATCATC+AGG | 0.400967 | 8.3:-30754984 | MS.gene067998:CDS |
| ACCTTTGTCATGCCATTCAC+TGG | 0.403390 | 8.3:+30754867 | None:intergenic |
| ATTACAAGCTGTTATTGGTT+TGG | 0.405372 | 8.3:-30756547 | MS.gene067998:CDS |
| TTCTAATGATGAAATTGTTA+AGG | 0.405378 | 8.3:-30760740 | MS.gene067998:intron |
| AGAAACACTGATGGAAGCTT+TGG | 0.407807 | 8.3:+30760959 | None:intergenic |
| GATATTATGGGACTCTATAG+TGG | 0.407931 | 8.3:-30754447 | MS.gene067998:CDS |
| CATGAATGGGTCCACGGTGG+GGG | 0.409859 | 8.3:+30754545 | None:intergenic |
| GAACGAAAGGAGCCGGCATC+TGG | 0.411704 | 8.3:+30764566 | None:intergenic |
| CAGAGTAACGGCGAGATAAC+CGG | 0.412139 | 8.3:+30765020 | None:intergenic |
| GCTTCTAACAACTTGGGATT+GGG | 0.412784 | 8.3:+30763187 | None:intergenic |
| GGGCTTAAGCTAAGGCTTGA+TGG | 0.413978 | 8.3:-30754963 | MS.gene067998:CDS |
| CTGTTATTGGTTTGGATGCA+CGG | 0.417412 | 8.3:-30756539 | MS.gene067998:CDS |
| GATAATGATCCTGGTGTTAT+GGG | 0.418077 | 8.3:-30764718 | MS.gene067998:CDS |
| GCTGAAAATTCTTGCATTGT+TGG | 0.418206 | 8.3:-30763341 | MS.gene067998:CDS |
| CTAACAACAAGATCCTTATA+CGG | 0.419797 | 8.3:+30764649 | None:intergenic |
| GTCGTGGATGATAGTGAAAC+TGG | 0.422782 | 8.3:+30755074 | None:intergenic |
| CCGTTTAGGGATATCTGGTT+CGG | 0.424087 | 8.3:+30765161 | None:intergenic |
| AGCTTCTAACAACTTGGGAT+TGG | 0.425340 | 8.3:+30763186 | None:intergenic |
| GAGTAATCATTGGTTTATAC+AGG | 0.425577 | 8.3:-30761334 | MS.gene067998:intron |
| CTATAGAGTCCCATAATATC+AGG | 0.426017 | 8.3:+30754450 | None:intergenic |
| CAGATGGGTGTGACCCCAAC+TGG | 0.430929 | 8.3:-30754240 | MS.gene067998:CDS |
| TGGCACTTCATAGCTTTCAT+AGG | 0.434008 | 8.3:-30764795 | MS.gene067998:CDS |
| ATGGGATCACAAGGCGCGTT+CGG | 0.435386 | 8.3:-30765294 | MS.gene067998:CDS |
| GCAGCTGTCAGAGGCACAAC+GGG | 0.436109 | 8.3:-30754345 | MS.gene067998:CDS |
| AGTTGGGATTCTGTCCAGTT+GGG | 0.436391 | 8.3:+30754226 | None:intergenic |
| GATGCCGGCTCCTTTCGTTC+AGG | 0.441178 | 8.3:-30764563 | MS.gene067998:intron |
| TCATAGCTTTCATAGGAAAT+CGG | 0.442142 | 8.3:-30764788 | MS.gene067998:CDS |
| CACACATCGAGAAGCTATAT+AGG | 0.442550 | 8.3:+30761380 | None:intergenic |
| AATTTGCACCGAGTAATCAT+TGG | 0.445556 | 8.3:-30761344 | MS.gene067998:CDS |
| GACCCATTCATGCAACTAGA+AGG | 0.451396 | 8.3:-30754534 | MS.gene067998:CDS |
| TTCGTTGATTAATCTACAAA+CGG | 0.451855 | 8.3:+30764897 | None:intergenic |
| ACAAATGCACCTGATATTAT+GGG | 0.455505 | 8.3:-30754459 | MS.gene067998:CDS |
| TTTCGCTTCAAAGTATCGTC+AGG | 0.463858 | 8.3:+30761507 | None:intergenic |
| GCGCTCGTTCTCTGATATGT+AGG | 0.465295 | 8.3:+30755214 | None:intergenic |
| GGGGAATATGGCACAGCTGA+TGG | 0.467637 | 8.3:-30760817 | MS.gene067998:CDS |
| AATCGTTAATACGATTCAAA+AGG | 0.468077 | 8.3:-30764965 | MS.gene067998:CDS |
| CCACAAGATTTGCTTGACTT+GGG | 0.468481 | 8.3:-30754591 | MS.gene067998:CDS |
| CCCCACTTTCTATAGCCTGC+TGG | 0.471779 | 8.3:+30755243 | None:intergenic |
| CGATTTCACGGATTACGATT+CGG | 0.471806 | 8.3:+30765205 | None:intergenic |
| TATGCGTTTGAAATAGCAGC+TGG | 0.472441 | 8.3:-30758114 | MS.gene067998:CDS |
| ACAGCATGGTCTGAGATTTG+AGG | 0.473050 | 8.3:-30755138 | MS.gene067998:CDS |
| AGTCCTTCTAGTTGCATGAA+TGG | 0.473320 | 8.3:+30754531 | None:intergenic |
| TGCATGAATGGGTCCACGGT+GGG | 0.476459 | 8.3:+30754543 | None:intergenic |
| ATATCAGAGAACGAGCGCTC+TGG | 0.477437 | 8.3:-30755209 | MS.gene067998:CDS |
| AGCAAGTCTCTGAACAAGTT+GGG | 0.478029 | 8.3:+30754210 | None:intergenic |
| ACAAGATCCTTATACGGAAT+CGG | 0.481699 | 8.3:+30764655 | None:intergenic |
| GTCCTTCTAGTTGCATGAAT+GGG | 0.486983 | 8.3:+30754532 | None:intergenic |
| CCTAATTATATCGCCAATAA+CGG | 0.489566 | 8.3:+30763282 | None:intergenic |
| GCATGAATGGGTCCACGGTG+GGG | 0.492744 | 8.3:+30754544 | None:intergenic |
| GGTGATTCATCAAGTAACAT+AGG | 0.492869 | 8.3:-30763256 | MS.gene067998:CDS |
| CATTCCGCTTCCTATATCAC+TGG | 0.494068 | 8.3:-30760790 | MS.gene067998:CDS |
| GGTTATTTGTTGGGTTCTTG+GGG | 0.494517 | 8.3:-30760836 | MS.gene067998:CDS |
| ATTCTTGCATTGTTGGGAAG+TGG | 0.495732 | 8.3:-30763334 | MS.gene067998:CDS |
| TGCTAAAGATTCTTTGGAGA+AGG | 0.496576 | 8.3:-30754277 | MS.gene067998:CDS |
| ATATTATGGGACTCTATAGT+GGG | 0.499149 | 8.3:-30754446 | MS.gene067998:CDS |
| CTCGACCTAATCAAATCAAT+CGG | 0.500422 | 8.3:-30765255 | MS.gene067998:CDS |
| CTTGCCGCTTCATTGTTTGG+CGG | 0.500585 | 8.3:-30754756 | MS.gene067998:CDS |
| GTTGTTGAGCTTCTTTCGCA+TGG | 0.504811 | 8.3:-30764847 | MS.gene067998:CDS |
| ATAATCCCACTGACGTGATC+TGG | 0.505989 | 8.3:+30755006 | None:intergenic |
| CCTCAATGATTATATCCAGC+AGG | 0.506143 | 8.3:-30755258 | MS.gene067998:CDS |
| CCCTTCACAGATTGTGATAC+GGG | 0.506698 | 8.3:+30754306 | None:intergenic |
| CTTACTGTAGAACTAATGCT+TGG | 0.508595 | 8.3:+30754501 | None:intergenic |
| TCATAGGAAATCGGCGTCGT+CGG | 0.508697 | 8.3:-30764779 | MS.gene067998:CDS |
| GTGGGATTATCATCAGATAC+AGG | 0.511328 | 8.3:-30754993 | MS.gene067998:CDS |
| CGCATGGGAAAGAAGCGGTT+AGG | 0.511994 | 8.3:-30764831 | MS.gene067998:CDS |
| TAGTCATAATCTGAAATACA+TGG | 0.515074 | 8.3:-30763011 | MS.gene067998:CDS |
| CTCAACAACTAACGGCAAAA+CGG | 0.515966 | 8.3:+30764861 | None:intergenic |
| TGGAGAAGGATGCAAAAGTC+AGG | 0.518290 | 8.3:-30754263 | MS.gene067998:CDS |
| ATGGAGCAACTGAAAACAAT+CGG | 0.518330 | 8.3:-30765330 | MS.gene067998:CDS |
| GAAAGAAGCGGTTAGGAAGA+AGG | 0.520105 | 8.3:-30764824 | MS.gene067998:CDS |
| AATCGGCCGCGAACTCGCCA+TGG | 0.522408 | 8.3:-30765313 | MS.gene067998:CDS |
| TTAAACAGGTAGCTGAACAT+AGG | 0.522822 | 8.3:-30764612 | MS.gene067998:CDS |
| GTGATCCCATGGCGAGTTCG+CGG | 0.523154 | 8.3:+30765307 | None:intergenic |
| ATCCAGCAGGCTATAGAAAG+TGG | 0.527579 | 8.3:-30755245 | MS.gene067998:CDS |
| GAATTTGAGGATGATGATGC+TGG | 0.528495 | 8.3:+30754903 | None:intergenic |
| AAGCAAGTCTCTGAACAAGT+TGG | 0.532860 | 8.3:+30754209 | None:intergenic |
| TTGTGGAGGAGATTGTTGAT+TGG | 0.535875 | 8.3:+30754608 | None:intergenic |
| CCGAACCAGATATCCCTAAA+CGG | 0.536714 | 8.3:-30765161 | MS.gene067998:CDS |
| ACTGCCCAAAATCCAGTGAA+TGG | 0.538629 | 8.3:-30754879 | MS.gene067998:CDS |
| TATTGGCGATATAATTAGGA+AGG | 0.540723 | 8.3:-30763278 | MS.gene067998:CDS |
| TTGTTGATTGGAGCTCTCCT+CGG | 0.541694 | 8.3:+30754620 | None:intergenic |
| AGGCGCGTTCGGTCAATCAA+AGG | 0.542680 | 8.3:-30765283 | MS.gene067998:CDS |
| CGCTCGTTCTCTGATATGTA+GGG | 0.543766 | 8.3:+30755215 | None:intergenic |
| GTGATTCATCAAGTAACATA+GGG | 0.544692 | 8.3:-30763255 | MS.gene067998:CDS |
| CTTCCCAGTGATATAGGAAG+CGG | 0.546539 | 8.3:+30760786 | None:intergenic |
| AAGTTGGGATTCTGTCCAGT+TGG | 0.548304 | 8.3:+30754225 | None:intergenic |
| ACCCTTCACAGATTGTGATA+CGG | 0.548453 | 8.3:+30754305 | None:intergenic |
| TTACTGTAGAACTAATGCTT+GGG | 0.548787 | 8.3:+30754502 | None:intergenic |
| ATGAATGGGTCCACGGTGGG+GGG | 0.550013 | 8.3:+30754546 | None:intergenic |
| TTAATGCGGTTGATTGCAGA+AGG | 0.553103 | 8.3:-30761158 | MS.gene067998:CDS |
| GATCATCAGGGCTTAAGCTA+AGG | 0.553819 | 8.3:-30754971 | MS.gene067998:CDS |
| GACTGACCTTGTTCCAGTGT+CGG | 0.553943 | 8.3:-30755054 | MS.gene067998:CDS |
| TTCATCATTAGAATATGCCT+CGG | 0.559232 | 8.3:+30760750 | None:intergenic |
| AACTTGTTCAGAGACTTGCT+TGG | 0.559297 | 8.3:-30754207 | MS.gene067998:CDS |
| GCCCGTATCACAATCTGTGA+AGG | 0.559581 | 8.3:-30754307 | MS.gene067998:CDS |
| GGTTAGGAAGAAGGCGGTCA+TGG | 0.559851 | 8.3:-30764815 | MS.gene067998:CDS |
| ATCGGCCGCGAACTCGCCAT+GGG | 0.561265 | 8.3:-30765312 | MS.gene067998:CDS |
| ATCACCTGAACGAAAGGAGC+CGG | 0.561526 | 8.3:+30764559 | None:intergenic |
| TTGTTGAGCTTCTTTCGCAT+GGG | 0.561760 | 8.3:-30764846 | MS.gene067998:CDS |
| GTCAACGATCACTTCCACAT+TGG | 0.561875 | 8.3:+30761449 | None:intergenic |
| CTTCTCTACGTTGAAATGCT+CGG | 0.563060 | 8.3:-30765114 | MS.gene067998:CDS |
| TCCAGCAGGCTATAGAAAGT+GGG | 0.565415 | 8.3:-30755244 | MS.gene067998:CDS |
| CTATATAGCTTCTCGATGTG+TGG | 0.566142 | 8.3:-30761379 | MS.gene067998:CDS |
| TCTAGTGAACAGAGTGGTGG+CGG | 0.566941 | 8.3:-30754417 | MS.gene067998:CDS |
| ATAACAATCACCTGAACGAA+AGG | 0.567560 | 8.3:+30764553 | None:intergenic |
| GGATGCAAAAGTCAGGCAGA+TGG | 0.568516 | 8.3:-30754256 | MS.gene067998:CDS |
| TTGATGGTGTTCAGAAGAAG+TGG | 0.570317 | 8.3:-30754947 | MS.gene067998:CDS |
| TGGTGCTGCAGACAGACCTC+AGG | 0.571390 | 8.3:-30754676 | MS.gene067998:CDS |
| ACAACTAACGGCAAAACGGC+AGG | 0.571577 | 8.3:+30764865 | None:intergenic |
| GATGCAAAAGTCAGGCAGAT+GGG | 0.571902 | 8.3:-30754255 | MS.gene067998:CDS |
| TTGCTGCAAATCAGTGGAGT+GGG | 0.571915 | 8.3:+30756581 | None:intergenic |
| AGTGAACAGAGTGGTGGCGG+CGG | 0.572269 | 8.3:-30754414 | MS.gene067998:CDS |
| TGAGGCTTATGAAGTTCCAA+AGG | 0.572646 | 8.3:-30755120 | MS.gene067998:CDS |
| AATAGCAGCTGGGAGGAAAG+TGG | 0.575708 | 8.3:-30758103 | MS.gene067998:CDS |
| CACTGGAACAAGGTCAGTCG+TGG | 0.576617 | 8.3:+30755058 | None:intergenic |
| GTTGGGATTCTGTCCAGTTG+GGG | 0.577231 | 8.3:+30754227 | None:intergenic |
| CCTGCTGGATATAATCATTG+AGG | 0.583089 | 8.3:+30755258 | None:intergenic |
| TGTATAAACCAATGATTACT+CGG | 0.587543 | 8.3:+30761336 | None:intergenic |
| GCAGCAGCTTCTAACAACTT+GGG | 0.588158 | 8.3:+30763181 | None:intergenic |
| AGATTGTGTGATAATGATCC+TGG | 0.589052 | 8.3:-30764727 | MS.gene067998:CDS |
| GAACGCGCCTTGTGATCCCA+TGG | 0.589618 | 8.3:+30765296 | None:intergenic |
| TGATGTTGTTCTGCAATAAG+CGG | 0.590067 | 8.3:+30762953 | None:intergenic |
| GTCGGACTCATTGTATGCGA+GGG | 0.592330 | 8.3:-30755036 | MS.gene067998:CDS |
| AGTACCTGAAGAAACACTGA+TGG | 0.594329 | 8.3:+30760950 | None:intergenic |
| TGTTATTGGTTTGGATGCAC+GGG | 0.595115 | 8.3:-30756538 | MS.gene067998:CDS |
| AGCTGCTGCATTTGACAACC+CGG | 0.596068 | 8.3:+30754362 | None:intergenic |
| GCATACAATGAGTCCGACAC+TGG | 0.596909 | 8.3:+30755041 | None:intergenic |
| TGATCATGTACTCAATCATA+CGG | 0.597576 | 8.3:+30761427 | None:intergenic |
| TACCTCTAAGCAGTCAATGA+CGG | 0.597831 | 8.3:+30762925 | None:intergenic |
| TGCCAGTTGCGAAGACATTG+AGG | 0.598185 | 8.3:-30756490 | MS.gene067998:intron |
| AATCTTCTCTCAAAACGCAC+CGG | 0.598198 | 8.3:-30765039 | MS.gene067998:CDS |
| GATTGCAGAAGGATTTGGAG+AGG | 0.602461 | 8.3:-30761147 | MS.gene067998:CDS |
| TTGCATGAATGGGTCCACGG+TGG | 0.602753 | 8.3:+30754542 | None:intergenic |
| GATGCTGGAGATGAATAAGC+TGG | 0.602865 | 8.3:+30754918 | None:intergenic |
| TGAGATCGTGATCGTCGTTG+AGG | 0.604788 | 8.3:+30764995 | None:intergenic |
| AGCGCGTTGCTGCAAATCAG+TGG | 0.605784 | 8.3:+30756575 | None:intergenic |
| AGAGAACGAGCGCTCTGGAG+CGG | 0.605954 | 8.3:-30755204 | MS.gene067998:CDS |
| TGTCGGACTCATTGTATGCG+AGG | 0.606090 | 8.3:-30755037 | MS.gene067998:CDS |
| AAGGTTCCAAAAGCTAATGT+TGG | 0.606418 | 8.3:-30754696 | MS.gene067998:CDS |
| AGCAGCTGTCAGAGGCACAA+CGG | 0.606641 | 8.3:-30754346 | MS.gene067998:CDS |
| CAGCAAGAATCTGGACAGCA+TGG | 0.608062 | 8.3:-30755152 | MS.gene067998:CDS |
| GACTCACCAGATCACGTCAG+TGG | 0.610506 | 8.3:-30755012 | MS.gene067998:CDS |
| TGATGGTGTTCAGAAGAAGT+GGG | 0.611696 | 8.3:-30754946 | MS.gene067998:CDS |
| CTATGATTATCACCAGATGC+CGG | 0.613011 | 8.3:-30764578 | MS.gene067998:CDS |
| TCCAGTGAATGGCATGACAA+AGG | 0.613450 | 8.3:-30754868 | MS.gene067998:CDS |
| TATGGAAGAGACACAGCGAA+TGG | 0.616828 | 8.3:+30763213 | None:intergenic |
| ATTCCGCTTCCTATATCACT+GGG | 0.617876 | 8.3:-30760789 | MS.gene067998:CDS |
| GAACTCGCCATGGGATCACA+AGG | 0.618854 | 8.3:-30765303 | MS.gene067998:CDS |
| CCCAAGTCAAGCAAATCTTG+TGG | 0.620345 | 8.3:+30754591 | None:intergenic |
| CAAGTTGTTAGAAGCTGCTG+CGG | 0.622141 | 8.3:-30763179 | MS.gene067998:CDS |
| CCCGTATCACAATCTGTGAA+GGG | 0.622447 | 8.3:-30754306 | MS.gene067998:CDS |
| ATGCGTTTGAAATAGCAGCT+GGG | 0.623907 | 8.3:-30758113 | MS.gene067998:CDS |
| TAGTTGCATGAATGGGTCCA+CGG | 0.625443 | 8.3:+30754539 | None:intergenic |
| GTCGTTGAGGAACAGAGTAA+CGG | 0.628932 | 8.3:+30765008 | None:intergenic |
| TCAAATGCAGCAGCTGTCAG+AGG | 0.630728 | 8.3:-30754354 | MS.gene067998:CDS |
| GAAAGAAGCTCAACAACTAA+CGG | 0.631117 | 8.3:+30764853 | None:intergenic |
| ATTGGCGATATAATTAGGAA+GGG | 0.632401 | 8.3:-30763277 | MS.gene067998:CDS |
| ACTCACCAGATCACGTCAGT+GGG | 0.633090 | 8.3:-30755011 | MS.gene067998:CDS |
| GTTGCTGCAAATCAGTGGAG+TGG | 0.633925 | 8.3:+30756580 | None:intergenic |
| CGATCTCAGCTGACTATATG+CGG | 0.636229 | 8.3:+30761115 | None:intergenic |
| GAAGTTATGCGATATGGCCG+AGG | 0.636501 | 8.3:-30760767 | MS.gene067998:CDS |
| GTCGTCGGTTTCGCATCTTG+TGG | 0.638713 | 8.3:-30764764 | MS.gene067998:CDS |
| AGTCATAATCTGAAATACAT+GGG | 0.639996 | 8.3:-30763010 | MS.gene067998:CDS |
| ATGAGTCCGACACTGGAACA+AGG | 0.640091 | 8.3:+30755048 | None:intergenic |
| GAAAGTGGATATGCTATCTG+AGG | 0.642288 | 8.3:-30758088 | MS.gene067998:intron |
| TCTTCGCAACTGGCATCATG+TGG | 0.645470 | 8.3:+30756498 | None:intergenic |
| ACAGATTGTGATACGGGCGA+CGG | 0.646894 | 8.3:+30754312 | None:intergenic |
| AGAACCGCCAAACAATGAAG+CGG | 0.647321 | 8.3:+30754752 | None:intergenic |
| AAGAACATCAACTAGCAGCA+AGG | 0.653866 | 8.3:-30754715 | MS.gene067998:CDS |
| AGGTTGCACATAATTTAATG+CGG | 0.654401 | 8.3:-30761172 | MS.gene067998:CDS |
| TCTTTCGCATGGGAAAGAAG+CGG | 0.658045 | 8.3:-30764836 | MS.gene067998:CDS |
| AGAGTAGCACCCATAACACC+AGG | 0.658462 | 8.3:+30764709 | None:intergenic |
| CATCAGATACAGGATCATCA+GGG | 0.658760 | 8.3:-30754983 | MS.gene067998:CDS |
| GGCGGCTATAACTCTGCAAG+TGG | 0.660521 | 8.3:-30754396 | MS.gene067998:CDS |
| AGTGAATGGCATGACAAAGG+TGG | 0.661156 | 8.3:-30754865 | MS.gene067998:CDS |
| CCAGCAGGCTATAGAAAGTG+GGG | 0.661545 | 8.3:-30755243 | MS.gene067998:CDS |
| TACATGGGTATTGATGCTCT+CGG | 0.662992 | 8.3:-30762995 | MS.gene067998:CDS |
| AAGTCAAGCAAATCTTGTGG+AGG | 0.665010 | 8.3:+30754594 | None:intergenic |
| TAAGTGCAGCACAAACGACA+AGG | 0.667985 | 8.3:+30764923 | None:intergenic |
| TGTGCCCATTAAAGCATCCG+AGG | 0.672072 | 8.3:-30754637 | MS.gene067998:CDS |
| AATGACCAAGTCTTCCAATG+TGG | 0.681347 | 8.3:-30761463 | MS.gene067998:CDS |
| ACTTCTAGTGAACAGAGTGG+TGG | 0.689546 | 8.3:-30754420 | MS.gene067998:CDS |
| GATGGTGTTCAGAAGAAGTG+GGG | 0.704018 | 8.3:-30754945 | MS.gene067998:CDS |
| CGTTTGAAATAGCAGCTGGG+AGG | 0.708061 | 8.3:-30758110 | MS.gene067998:CDS |
| TATTATGGGACTCTATAGTG+GGG | 0.715463 | 8.3:-30754445 | MS.gene067998:CDS |
| TCGATTATAAGATCAAACAA+CGG | 0.722245 | 8.3:+30764682 | None:intergenic |
| AGAAGCGGTTAGGAAGAAGG+CGG | 0.763685 | 8.3:-30764821 | MS.gene067998:CDS |
| GCTACTTCTAGTGAACAGAG+TGG | 0.788832 | 8.3:-30754423 | MS.gene067998:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 30754203 | 30765352 | 30754203 | ID=MS.gene067998 |
| chr8.3 | mRNA | 30754203 | 30765352 | 30754203 | ID=MS.gene067998.t1;Parent=MS.gene067998 |
| chr8.3 | exon | 30764564 | 30765352 | 30764564 | ID=MS.gene067998.t1.exon1;Parent=MS.gene067998.t1 |
| chr8.3 | CDS | 30764564 | 30765352 | 30764564 | ID=cds.MS.gene067998.t1;Parent=MS.gene067998.t1 |
| chr8.3 | exon | 30763156 | 30763371 | 30763156 | ID=MS.gene067998.t1.exon2;Parent=MS.gene067998.t1 |
| chr8.3 | CDS | 30763156 | 30763371 | 30763156 | ID=cds.MS.gene067998.t1;Parent=MS.gene067998.t1 |
| chr8.3 | exon | 30762928 | 30763038 | 30762928 | ID=MS.gene067998.t1.exon3;Parent=MS.gene067998.t1 |
| chr8.3 | CDS | 30762928 | 30763038 | 30762928 | ID=cds.MS.gene067998.t1;Parent=MS.gene067998.t1 |
| chr8.3 | exon | 30761335 | 30761532 | 30761335 | ID=MS.gene067998.t1.exon4;Parent=MS.gene067998.t1 |
| chr8.3 | CDS | 30761335 | 30761532 | 30761335 | ID=cds.MS.gene067998.t1;Parent=MS.gene067998.t1 |
| chr8.3 | exon | 30761109 | 30761240 | 30761109 | ID=MS.gene067998.t1.exon5;Parent=MS.gene067998.t1 |
| chr8.3 | CDS | 30761109 | 30761240 | 30761109 | ID=cds.MS.gene067998.t1;Parent=MS.gene067998.t1 |
| chr8.3 | exon | 30760955 | 30761011 | 30760955 | ID=MS.gene067998.t1.exon6;Parent=MS.gene067998.t1 |
| chr8.3 | CDS | 30760955 | 30761011 | 30760955 | ID=cds.MS.gene067998.t1;Parent=MS.gene067998.t1 |
| chr8.3 | exon | 30760741 | 30760857 | 30760741 | ID=MS.gene067998.t1.exon7;Parent=MS.gene067998.t1 |
| chr8.3 | CDS | 30760741 | 30760857 | 30760741 | ID=cds.MS.gene067998.t1;Parent=MS.gene067998.t1 |
| chr8.3 | exon | 30758089 | 30758166 | 30758089 | ID=MS.gene067998.t1.exon8;Parent=MS.gene067998.t1 |
| chr8.3 | CDS | 30758089 | 30758166 | 30758089 | ID=cds.MS.gene067998.t1;Parent=MS.gene067998.t1 |
| chr8.3 | exon | 30756491 | 30756634 | 30756491 | ID=MS.gene067998.t1.exon9;Parent=MS.gene067998.t1 |
| chr8.3 | CDS | 30756491 | 30756634 | 30756491 | ID=cds.MS.gene067998.t1;Parent=MS.gene067998.t1 |
| chr8.3 | exon | 30754203 | 30755300 | 30754203 | ID=MS.gene067998.t1.exon10;Parent=MS.gene067998.t1 |
| chr8.3 | CDS | 30754203 | 30755300 | 30754203 | ID=cds.MS.gene067998.t1;Parent=MS.gene067998.t1 |
| Gene Sequence |
| Protein sequence |