AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene068362


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068362.t1 MTR_8g027450 99.278 969 7 0 1 969 1 969 0.0 1976
MS.gene068362.t1 MTR_6g051660 74.829 731 182 2 1 729 1 731 0.0 1078
MS.gene068362.t1 MTR_7g021500 26.400 250 157 7 18 262 13 240 3.25e-14 77.8
MS.gene068362.t1 MTR_7g021500 26.400 250 157 7 18 262 13 240 3.42e-14 77.8
MS.gene068362.t1 MTR_0010s0220 33.835 133 83 2 6 133 7 139 1.18e-11 69.3
MS.gene068362.t1 MTR_1g116957 25.911 247 160 5 18 262 11 236 1.94e-11 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068362.t1 AT2G46520 68.557 970 298 3 1 965 1 968 0.0 1410
MS.gene068362.t1 AT3G59020 26.087 253 160 6 18 265 14 244 6.85e-15 80.1
MS.gene068362.t1 AT3G59020 26.087 253 160 6 18 265 14 244 9.55e-15 79.7
MS.gene068362.t1 AT2G31660 27.731 238 142 6 18 246 14 230 5.01e-14 77.4
MS.gene068362.t1 AT1G26170 21.326 558 337 14 6 511 5 512 3.29e-13 74.7

Find 243 sgRNAs with CRISPR-Local

Find 286 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGAATGAGGAGGAGTTTA+AGG 0.075617 8.3:+66835921 MS.gene068362:CDS
GATATTCAGTTCACTGTTTC+TGG 0.091376 8.3:+66837433 MS.gene068362:CDS
CGCCACCGGGTTTGCATTAA+AGG 0.121487 8.3:-66836322 None:intergenic
TCGGCGTGGCGGCGGGGTTC+AGG 0.167402 8.3:-66835130 None:intergenic
CGCCTTATGTTTCTCACATT+TGG 0.169130 8.3:+66837351 MS.gene068362:CDS
CTTGCTGTGTGGACTTTGTT+AGG 0.222365 8.3:+66835964 MS.gene068362:CDS
CAAGGATTGTGCGATATATT+TGG 0.232980 8.3:+66836356 MS.gene068362:CDS
CCGAATCTTAAGCTGATTAC+TGG 0.249866 8.3:+66837542 MS.gene068362:CDS
TTGTGAGTCTCCAGTACTTC+TGG 0.252989 8.3:+66837610 MS.gene068362:CDS
ATCCTGCAGCTTCTGCATCC+TGG 0.258895 8.3:+66837633 MS.gene068362:CDS
TGAGAATATTAATCTTTATA+TGG 0.266958 8.3:+66835897 MS.gene068362:CDS
TTCTGCATCCTGGGGTAAAA+TGG 0.284025 8.3:+66837643 MS.gene068362:CDS
CAGCTTTGTGCACAGTTCCC+TGG 0.284744 8.3:+66837857 MS.gene068362:CDS
CGAATTTGCATTGAGGGGTT+GGG 0.285078 8.3:+66836840 MS.gene068362:CDS
TTCAGACTCTGGGAGCTTAA+AGG 0.289130 8.3:-66836748 None:intergenic
GCCTTATGTTTCTCACATTT+GGG 0.308273 8.3:+66837352 MS.gene068362:CDS
TCCCCTTGGCTGATCTCATT+TGG 0.319827 8.3:-66837212 None:intergenic
AGAAGCGAGGGCCATGATTT+GGG 0.321584 8.3:-66835427 None:intergenic
TTGCTCTTGTGGATGAGCTT+AGG 0.321661 8.3:+66835863 MS.gene068362:CDS
AGTCGCAGAAATTGTGTTGT+AGG 0.323586 8.3:+66835713 MS.gene068362:CDS
TGAATCATATTGAGTATATT+AGG 0.323794 8.3:+66836169 MS.gene068362:CDS
TCCTGCAGCTTCTGCATCCT+GGG 0.325044 8.3:+66837634 MS.gene068362:CDS
TGGCGGCGGGGTTCAGGGAG+AGG 0.333918 8.3:-66835124 None:intergenic
TTCATCAGCATTGAGAAAAC+TGG 0.336053 8.3:-66836711 None:intergenic
AAGAAGCGAGGGCCATGATT+TGG 0.336122 8.3:-66835428 None:intergenic
ATGCAAACCCGGTGGCGAAT+TGG 0.341622 8.3:+66836328 MS.gene068362:CDS
ATCATGGCCCTCGCTTCTTC+CGG 0.357089 8.3:+66835432 MS.gene068362:CDS
GGAAGCATTCGGAGAGGAAT+TGG 0.359953 8.3:-66835087 None:intergenic
GATTGCTTGTGAGTTGCTTA+AGG 0.364735 8.3:+66836230 MS.gene068362:CDS
AGCTTTGTGCACAGTTCCCT+GGG 0.366805 8.3:+66837858 MS.gene068362:CDS
GTATTGTGACACTTCTTTCT+CGG 0.370722 8.3:+66837672 MS.gene068362:CDS
CTACTGACTCAAACAGATAA+TGG 0.371221 8.3:-66836911 None:intergenic
TCGTGACCAGCTTGCGGTTA+CGG 0.373029 8.3:+66836008 MS.gene068362:CDS
TCCCGGGGATCATTAATATC+TGG 0.373759 8.3:-66837812 None:intergenic
AAATGTATTATGAGGGTTCT+TGG 0.376293 8.3:+66836789 MS.gene068362:CDS
ACCATTGATTGAAGCGTAAT+CGG 0.377577 8.3:-66835491 None:intergenic
TGCTCTTGTGGATGAGCTTA+GGG 0.378445 8.3:+66835864 MS.gene068362:CDS
AGAGGATTCGGCGTGGCGGC+GGG 0.379976 8.3:-66835137 None:intergenic
TGAGTATATTAGGAGGGATA+TGG 0.381340 8.3:+66836179 MS.gene068362:CDS
TCGAATTTGCATTGAGGGGT+TGG 0.382244 8.3:+66836839 MS.gene068362:CDS
AAGGGGATTGCTACGCGTTA+TGG 0.383164 8.3:+66836249 MS.gene068362:CDS
GCTTTACTGTCCGCCTTCTC+TGG 0.384838 8.3:-66837394 None:intergenic
TGAAGACTAGCAACAAGTTC+CGG 0.387862 8.3:-66835451 None:intergenic
AGAGCATGAGAGGTACGATT+AGG 0.389704 8.3:-66835339 None:intergenic
AAAATCGCACTAAATATATC+AGG 0.393109 8.3:-66837503 None:intergenic
CAGGGAACTGTGCACAAAGC+TGG 0.393904 8.3:-66837856 None:intergenic
GATTATACCGCAGATTTGTC+AGG 0.398128 8.3:+66836092 MS.gene068362:CDS
TGCTGATGGTCTTGCTCTTG+TGG 0.398506 8.3:+66835852 MS.gene068362:CDS
CTTGTTGCTAGTCTTCAAAA+AGG 0.400301 8.3:+66835457 MS.gene068362:CDS
CGGCGTGGCGGCGGGGTTCA+GGG 0.404169 8.3:-66835129 None:intergenic
CATAGTTTGTTTGCGGCCGA+TGG 0.405046 8.3:+66836069 MS.gene068362:CDS
TCCGATTACGCTTCAATCAA+TGG 0.406354 8.3:+66835490 MS.gene068362:CDS
GCAAGGAAACGAACCAAATC+AGG 0.407252 8.3:-66836582 None:intergenic
ATGAATGGATGGGTGAGTTT+AGG 0.409263 8.3:+66835791 MS.gene068362:CDS
TGCCCTTGTGCGTCTACTCC+AGG 0.410838 8.3:+66837172 MS.gene068362:CDS
GCTTGATTTGAAGTATTGTT+TGG 0.411121 8.3:+66835579 MS.gene068362:CDS
ATGTTATGAAATGTATTATG+AGG 0.413049 8.3:+66836781 MS.gene068362:CDS
GAGCATGAGAGGTACGATTA+GGG 0.413296 8.3:-66835338 None:intergenic
TTGCTGTGTGGACTTTGTTA+GGG 0.413943 8.3:+66835965 MS.gene068362:CDS
GAGAGGATTCGGCGTGGCGG+CGG 0.414397 8.3:-66835138 None:intergenic
TCTGCAATATCTGGCATGTC+AGG 0.421184 8.3:-66837722 None:intergenic
TAAGATTCGGAATCCAGAAC+TGG 0.422640 8.3:-66837529 None:intergenic
TCCTCCCTCAACCTCACATT+CGG 0.426403 8.3:-66836126 None:intergenic
TCAAATATCTGCATGTAGAT+TGG 0.426703 8.3:-66837104 None:intergenic
TCTCTTGAGGGGAGTGCTGA+TGG 0.427391 8.3:+66835838 MS.gene068362:CDS
GGCGGAGGAGAGAGAGGATT+CGG 0.429321 8.3:-66835149 None:intergenic
GTTAGGTTGGGAGGAGGCGG+AGG 0.429322 8.3:-66835164 None:intergenic
GAAGTTAGGTTGGGAGGAGG+CGG 0.430922 8.3:-66835167 None:intergenic
GTCAAATATGCCAAGTACTT+TGG 0.431949 8.3:-66837243 None:intergenic
GGAGGAGGCGGAGGAGAGAG+AGG 0.432967 8.3:-66835155 None:intergenic
AGGACGGCGAGGGCGAAGTT+AGG 0.434374 8.3:-66835181 None:intergenic
CGGCGAGGGCGAAGTTAGGT+TGG 0.440463 8.3:-66835177 None:intergenic
ATTGCTTGTGAGTTGCTTAA+GGG 0.442178 8.3:+66836231 MS.gene068362:CDS
GCTGCAGGATCCAGAAGTAC+TGG 0.443966 8.3:-66837620 None:intergenic
TCCTTCCAGCATTGTAAAGT+TGG 0.446082 8.3:-66837772 None:intergenic
TTGTCCTTCCAATTCGCCAC+CGG 0.447945 8.3:-66836336 None:intergenic
AGGCTTCGGAGAGCTGAGAT+TGG 0.453836 8.3:-66835378 None:intergenic
TTCGTCCAACTTTACAATGC+TGG 0.457686 8.3:+66837767 MS.gene068362:CDS
AGAGGAATTGGAGAGTTTGT+TGG 0.459131 8.3:-66835075 None:intergenic
GAATTTGCATTGAGGGGTTG+GGG 0.459250 8.3:+66836841 MS.gene068362:CDS
TGTCCTTCCAATTCGCCACC+GGG 0.461059 8.3:-66836335 None:intergenic
CCCGATGATAGCTAAGGCTT+CGG 0.463072 8.3:-66835392 None:intergenic
TTATTTCAAGCCGAGGGAAA+AGG 0.463307 8.3:-66836995 None:intergenic
TACTGATTCTCTTCAGACTC+TGG 0.463688 8.3:-66836759 None:intergenic
TTGAGGATCATATGAATGAA+TGG 0.467479 8.3:+66835776 MS.gene068362:CDS
AGTTTGTTGGTTCCATTCCA+TGG 0.468298 8.3:-66835062 None:intergenic
CAGGGAGAGGAGAGAGAGTG+TGG 0.469257 8.3:-66835111 None:intergenic
CCAGTAATCAGCTTAAGATT+CGG 0.472206 8.3:-66837542 None:intergenic
TTTCTCGGCAAGAACAAGAC+AGG 0.475623 8.3:+66837687 MS.gene068362:CDS
TTTAGTGTTTCTGGTGGTGG+GGG 0.476965 8.3:-66835679 None:intergenic
TGTTCATCATAGTTTGTTTG+CGG 0.478214 8.3:+66836062 MS.gene068362:CDS
TAGTAAAGGACGAGGGTGGC+AGG 0.478712 8.3:+66836661 MS.gene068362:CDS
GAGAGTGTGGAGGAAGCATT+CGG 0.480598 8.3:-66835098 None:intergenic
TGGAGTAGACGCACAAGGGC+AGG 0.484502 8.3:-66837170 None:intergenic
TCTACAAAGAAGGCTGCAAC+CGG 0.487821 8.3:+66836390 MS.gene068362:CDS
AGTAGCCGGTCTTGTGAAGC+GGG 0.488425 8.3:+66836929 MS.gene068362:CDS
CTCAAACAGATAATGGTTGA+AGG 0.488910 8.3:-66836904 None:intergenic
AGTGCACCTGCCTTAAGCAT+TGG 0.489711 8.3:-66836501 None:intergenic
GTTGCTCGAATTTGCATTGA+GGG 0.490878 8.3:+66836834 MS.gene068362:CDS
TAATGAGTATCCAATGCTTA+AGG 0.494559 8.3:+66836491 MS.gene068362:CDS
ACTAGTTATCCTTCTCTTGA+GGG 0.494715 8.3:+66835826 MS.gene068362:CDS
AAGATCTGTGGAGACATAAC+CGG 0.495143 8.3:-66836409 None:intergenic
AGCAACGCTGTCTGATTCAC+AGG 0.503224 8.3:-66837914 None:intergenic
CTTTGGTCAGTCTATCCCCT+TGG 0.503293 8.3:-66837226 None:intergenic
ATCACGATTTCCCCAAATCA+TGG 0.503511 8.3:+66835416 MS.gene068362:CDS
TGGAGACTCACAAATGAGTC+TGG 0.504113 8.3:-66837600 None:intergenic
TGCATGTAGATTGGTGGGAT+GGG 0.505019 8.3:-66837095 None:intergenic
CCCAATCCTCGATTCCGAAA+AGG 0.505753 8.3:+66835303 MS.gene068362:CDS
TCCGAAGCCTTAGCTATCAT+CGG 0.505835 8.3:+66835391 MS.gene068362:CDS
TGAGAAACTCTTAATAGTAA+AGG 0.508710 8.3:+66836647 MS.gene068362:CDS
AGGGAACTGTGCACAAAGCT+GGG 0.510033 8.3:-66837855 None:intergenic
GCATCAAGCACTTCTGATCA+AGG 0.510248 8.3:+66837278 MS.gene068362:CDS
GAGGGTGGCAGGCTACGTTA+TGG 0.511357 8.3:+66836672 MS.gene068362:CDS
GCAAGTAACTGAAATGCGTA+TGG 0.512567 8.3:-66837047 None:intergenic
TACTAGTTATCCTTCTCTTG+AGG 0.515638 8.3:+66835825 MS.gene068362:CDS
GGCGAGGGCGAAGTTAGGTT+GGG 0.516568 8.3:-66835176 None:intergenic
ACAGATAATGGTTGAAGGTG+GGG 0.520696 8.3:-66836899 None:intergenic
ATGACTTGAGGGAACCTCCC+AGG 0.521093 8.3:-66837875 None:intergenic
TTCCAGATATTAATGATCCC+CGG 0.522021 8.3:+66837810 MS.gene068362:CDS
CCAGATATTGCAGAAAATGT+AGG 0.524692 8.3:+66837731 MS.gene068362:CDS
CATTTGCAGTGATGACTTGA+GGG 0.527183 8.3:-66837886 None:intergenic
CCGAAGCCTTAGCTATCATC+GGG 0.527980 8.3:+66835392 MS.gene068362:CDS
CCCCAGGATGCAGAAGCTGC+AGG 0.528376 8.3:-66837635 None:intergenic
GACGAGACGGAGGACGGCGA+GGG 0.536397 8.3:-66835191 None:intergenic
ACTCCAGGCCTTCCTTCAAA+AGG 0.538342 8.3:+66837187 MS.gene068362:CDS
TCACTGTTTCTGGTTAAGCA+TGG 0.538604 8.3:+66837443 MS.gene068362:CDS
AACAGATAATGGTTGAAGGT+GGG 0.538694 8.3:-66836900 None:intergenic
GGTCTCTCTTTCTACAAAGA+AGG 0.540099 8.3:+66836380 MS.gene068362:CDS
ATAGTTTGTTTGCGGCCGAT+GGG 0.540550 8.3:+66836070 MS.gene068362:CDS
TCTTTATATGGAGAAGAATG+AGG 0.540847 8.3:+66835909 MS.gene068362:CDS
GATAGACTGACCAAAGTACT+TGG 0.541303 8.3:+66837233 MS.gene068362:CDS
AGTTGACGGCAGCGGCTTGA+CGG 0.542493 8.3:-66835240 None:intergenic
CTGCATGTAGATTGGTGGGA+TGG 0.546010 8.3:-66837096 None:intergenic
GCCCAAATGTGAGAAACATA+AGG 0.547648 8.3:-66837353 None:intergenic
AACTAATGCTCGGTTGTAAG+TGG 0.547807 8.3:-66837948 None:intergenic
GGATCATATGAATGAATGGA+TGG 0.549813 8.3:+66835780 MS.gene068362:CDS
ATGTAGATTGGTGGGATGGG+TGG 0.550873 8.3:-66837092 None:intergenic
TCCAGATATTAATGATCCCC+GGG 0.552430 8.3:+66837811 MS.gene068362:CDS
ACATTTGCAGTGATGACTTG+AGG 0.556182 8.3:-66837887 None:intergenic
TGTTATGAAATGTATTATGA+GGG 0.556990 8.3:+66836782 MS.gene068362:CDS
GGTTATCTTCAGCGGACCAA+CGG 0.558438 8.3:-66835282 None:intergenic
AATATCTGCATGTAGATTGG+TGG 0.558745 8.3:-66837101 None:intergenic
TTGCTTGTGAGTTGCTTAAG+GGG 0.562415 8.3:+66836232 MS.gene068362:CDS
CAGTAGCCGGTCTTGTGAAG+CGG 0.563321 8.3:+66836928 MS.gene068362:CDS
TGATTCCGAATGTGAGGTTG+AGG 0.563458 8.3:+66836121 MS.gene068362:CDS
CGGACCAACGGAGACGGAGG+TGG 0.565978 8.3:-66835270 None:intergenic
GGCGAAGTTAGGTTGGGAGG+AGG 0.567027 8.3:-66835170 None:intergenic
ACGGATCTGATCGGAGATGG+AGG 0.567473 8.3:-66835221 None:intergenic
TTGACGGATCTGATCGGAGA+TGG 0.567532 8.3:-66835224 None:intergenic
TGTGAAGCGGGCTTCTGAGA+GGG 0.568121 8.3:+66836941 MS.gene068362:CDS
ACTGATTCTCTTCAGACTCT+GGG 0.573743 8.3:-66836758 None:intergenic
GAGTATCCAATGCTTAAGGC+AGG 0.575297 8.3:+66836495 MS.gene068362:CDS
TATCTGTTTGAGTCAGTAGC+CGG 0.575956 8.3:+66836915 MS.gene068362:CDS
AGAACAAGACAGGGTTGAGG+AGG 0.576975 8.3:+66837697 MS.gene068362:CDS
ATTATACCGCAGATTTGTCA+GGG 0.577085 8.3:+66836093 MS.gene068362:CDS
TCGCACTAAATATATCAGGC+TGG 0.577096 8.3:-66837499 None:intergenic
GGATTGTGCGATATATTTGG+TGG 0.577400 8.3:+66836359 MS.gene068362:CDS
TTCGCACATTCACCATGGAA+TGG 0.579069 8.3:+66835050 None:intergenic
TTCAGCGACGAGACGGAGGA+CGG 0.581545 8.3:-66835197 None:intergenic
TATCAAAAGAAGTAGCATTG+AGG 0.583401 8.3:+66836553 MS.gene068362:CDS
AGAAGCCCGCTTCACAAGAC+CGG 0.584077 8.3:-66836934 None:intergenic
ATCATATTGAGTATATTAGG+AGG 0.584593 8.3:+66836172 MS.gene068362:CDS
GAAGCGAGGGCCATGATTTG+GGG 0.585140 8.3:-66835426 None:intergenic
GACAGTATTATTTCAAGCCG+AGG 0.585780 8.3:-66837002 None:intergenic
TTTGGTTCGTTTCCTTGCTG+CGG 0.587294 8.3:+66836587 MS.gene068362:CDS
CGCGTCGTTGATTGACGCTG+CGG 0.589913 8.3:+66835642 MS.gene068362:CDS
GAGGATTCGGCGTGGCGGCG+GGG 0.590284 8.3:-66835136 None:intergenic
CGACGAGACGGAGGACGGCG+AGG 0.590663 8.3:-66835192 None:intergenic
GAGGTTGAGGGAGGATGATG+AGG 0.591211 8.3:+66836134 MS.gene068362:CDS
TGCATCCTGGGGTAAAATGG+TGG 0.591851 8.3:+66837646 MS.gene068362:CDS
TAATTGCCGTAACCGCAAGC+TGG 0.592087 8.3:-66836014 None:intergenic
TCAGCACTCCCCTCAAGAGA+AGG 0.592983 8.3:-66835835 None:intergenic
AGGCCTGGAGTAGACGCACA+AGG 0.593702 8.3:-66837175 None:intergenic
GGGATCATTAATATCTGGAA+GGG 0.594843 8.3:-66837807 None:intergenic
AAACAGATAATGGTTGAAGG+TGG 0.595794 8.3:-66836901 None:intergenic
AACTTACTCAAACTAATGCT+CGG 0.596616 8.3:-66837958 None:intergenic
TGACTTGAGGGAACCTCCCA+GGG 0.597802 8.3:-66837874 None:intergenic
AACAAGTTCCGGAAGAAGCG+AGG 0.599510 8.3:-66835440 None:intergenic
GGAGAGGAGAGAGAGTGTGG+AGG 0.600742 8.3:-66835108 None:intergenic
TGGAGGGTTCAGCGACGAGA+CGG 0.603655 8.3:-66835204 None:intergenic
GGATCATTAATATCTGGAAG+GGG 0.603768 8.3:-66837806 None:intergenic
AAGCTCCTTTAATGCAAACC+CGG 0.603899 8.3:+66836317 MS.gene068362:CDS
ACAAGTTCCGGAAGAAGCGA+GGG 0.604193 8.3:-66835439 None:intergenic
CGGATCTGATCGGAGATGGA+GGG 0.605850 8.3:-66835220 None:intergenic
TTAGAGAGCTCCAGAGAAGG+CGG 0.607962 8.3:+66837384 MS.gene068362:CDS
TTCTCGGCAAGAACAAGACA+GGG 0.608184 8.3:+66837688 MS.gene068362:CDS
TCATATTGAGTATATTAGGA+GGG 0.608345 8.3:+66836173 MS.gene068362:CDS
GCACCAAATGAGATCAGCCA+AGG 0.608644 8.3:+66837209 MS.gene068362:CDS
AGCGGCTTGACGGATCTGAT+CGG 0.609749 8.3:-66835230 None:intergenic
TATATTAGGAGGGATATGGA+AGG 0.611021 8.3:+66836183 MS.gene068362:CDS
TTGGTGGCGGAGAGCATGAG+AGG 0.615233 8.3:-66835349 None:intergenic
AAAACCACCTCCGTCTCCGT+TGG 0.615604 8.3:+66835266 MS.gene068362:CDS
TTGTGAAGCGGGCTTCTGAG+AGG 0.615980 8.3:+66836940 MS.gene068362:CDS
TGTTGCTCGAATTTGCATTG+AGG 0.616016 8.3:+66836833 MS.gene068362:CDS
ACTAAATATATCAGGCTGGA+CGG 0.616909 8.3:-66837495 None:intergenic
CTAGTTATCCTTCTCTTGAG+GGG 0.618255 8.3:+66835827 MS.gene068362:CDS
ACTCTTAATAGTAAAGGACG+AGG 0.618274 8.3:+66836653 MS.gene068362:CDS
GTGATCTTGATACAAGGAGG+AGG 0.620319 8.3:+66836208 MS.gene068362:CDS
GATTCCGAATGTGAGGTTGA+GGG 0.620733 8.3:+66836122 MS.gene068362:CDS
ACAGTATTATTTCAAGCCGA+GGG 0.621118 8.3:-66837001 None:intergenic
GTGATTCCCGATGATAGCTA+AGG 0.621401 8.3:-66835398 None:intergenic
CAAGTAACTGAAATGCGTAT+GGG 0.621742 8.3:-66837046 None:intergenic
CTTCAGCGGACCAACGGAGA+CGG 0.622307 8.3:-66835276 None:intergenic
CACCAAATGAGATCAGCCAA+GGG 0.623350 8.3:+66837210 MS.gene068362:CDS
ATTGTAAAGTTGGACGAAGG+TGG 0.623656 8.3:-66837762 None:intergenic
ATATCTGCATGTAGATTGGT+GGG 0.627188 8.3:-66837100 None:intergenic
TTGAACATCAACAAGATCTG+TGG 0.627448 8.3:-66836421 None:intergenic
GAGGATTGGGTTATCTTCAG+CGG 0.631308 8.3:-66835290 None:intergenic
TTTGTGCACAGTTCCCTGGG+AGG 0.632283 8.3:+66837861 MS.gene068362:CDS
TCCAACTTTACAATGCTGGA+AGG 0.632984 8.3:+66837771 MS.gene068362:CDS
AAACCCGGTGGCGAATTGGA+AGG 0.633015 8.3:+66836332 MS.gene068362:CDS
CCTGCAGCTTCTGCATCCTG+GGG 0.635126 8.3:+66837635 MS.gene068362:CDS
AAGGTAGTGATCTTGATACA+AGG 0.638914 8.3:+66836202 MS.gene068362:CDS
CAGCGGACCAACGGAGACGG+AGG 0.640762 8.3:-66835273 None:intergenic
GGGGATCATTAATATCTGGA+AGG 0.642825 8.3:-66837808 None:intergenic
GACTAGTCGTGACCAGCTTG+CGG 0.643562 8.3:+66836002 MS.gene068362:CDS
AAGATTCGGAATCCAGAACT+GGG 0.643798 8.3:-66837528 None:intergenic
TTGCTCGAATTTGCATTGAG+GGG 0.644156 8.3:+66836835 MS.gene068362:CDS
GCAAGAACAAGACAGGGTTG+AGG 0.647585 8.3:+66837694 MS.gene068362:CDS
CAACATTTGACTCCGCAGCA+AGG 0.650912 8.3:-66836599 None:intergenic
GGCCTGGAGTAGACGCACAA+GGG 0.654528 8.3:-66837174 None:intergenic
TTATATGGAGAAGAATGAGG+AGG 0.657740 8.3:+66835912 MS.gene068362:CDS
TGAATATCAAGAGAGACTTG+AGG 0.658051 8.3:-66837418 None:intergenic
GATCATATGAATGAATGGAT+GGG 0.659145 8.3:+66835781 MS.gene068362:CDS
AATCTGCGGTATAATCCCAT+CGG 0.662771 8.3:-66836085 None:intergenic
AGCATTGTAAAGTTGGACGA+AGG 0.671018 8.3:-66837765 None:intergenic
AGGGTTCAGCGACGAGACGG+AGG 0.675337 8.3:-66835201 None:intergenic
AGAGAGAGGATTCGGCGTGG+CGG 0.684559 8.3:-66835141 None:intergenic
TTATACCGCAGATTTGTCAG+GGG 0.685030 8.3:+66836094 MS.gene068362:CDS
TGTGGAGGAAGCATTCGGAG+AGG 0.686501 8.3:-66835093 None:intergenic
TTAATAGTAAAGGACGAGGG+TGG 0.686705 8.3:+66836657 MS.gene068362:CDS
GGATTGTGATTCCGAATGTG+AGG 0.687428 8.3:+66836115 MS.gene068362:CDS
CTCCTTTAATGCAAACCCGG+TGG 0.691872 8.3:+66836320 MS.gene068362:CDS
CGCAGCGTCAATCAACGACG+CGG 0.696713 8.3:-66835641 None:intergenic
TCCGAATGTGAGGTTGAGGG+AGG 0.708339 8.3:+66836125 MS.gene068362:CDS
GATCATTAATATCTGGAAGG+GGG 0.710644 8.3:-66837805 None:intergenic
ACAATCCCCTGACAAATCTG+CGG 0.710797 8.3:-66836099 None:intergenic
GTAGTGATCTTGATACAAGG+AGG 0.711592 8.3:+66836205 MS.gene068362:CDS
CTCTTAATAGTAAAGGACGA+GGG 0.713370 8.3:+66836654 MS.gene068362:CDS
ACCAAATGAGATCAGCCAAG+GGG 0.717940 8.3:+66837211 MS.gene068362:CDS
GGTGGCGAATTGGAAGGACA+AGG 0.722542 8.3:+66836338 MS.gene068362:CDS
AGGAGAGAGAGGATTCGGCG+TGG 0.725402 8.3:-66835144 None:intergenic
GAGGGCGAAGTTAGGTTGGG+AGG 0.730306 8.3:-66835173 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAGAATATTAATCTTTATA+TGG + chr8.3:66835897-66835916 MS.gene068362:CDS 15.0%
!! ATGTTATGAAATGTATTATG+AGG + chr8.3:66836781-66836800 MS.gene068362:CDS 20.0%
!! TGAATCATATTGAGTATATT+AGG + chr8.3:66836169-66836188 MS.gene068362:CDS 20.0%
!! TGTTATGAAATGTATTATGA+GGG + chr8.3:66836782-66836801 MS.gene068362:CDS 20.0%
! AAAATCGCACTAAATATATC+AGG - chr8.3:66837506-66837525 None:intergenic 25.0%
! ATCATATTGAGTATATTAGG+AGG + chr8.3:66836172-66836191 MS.gene068362:CDS 25.0%
! ATGAAGAAACAAAAAATTCC+CGG - chr8.3:66837832-66837851 None:intergenic 25.0%
! GAAAAATTCAGTTACATCAT+TGG - chr8.3:66837027-66837046 None:intergenic 25.0%
! TCATATTGAGTATATTAGGA+GGG + chr8.3:66836173-66836192 MS.gene068362:CDS 25.0%
! TGAGAAACTCTTAATAGTAA+AGG + chr8.3:66836647-66836666 MS.gene068362:CDS 25.0%
! TTTCTTAAAAATCGAATTCG+CGG - chr8.3:66835527-66835546 None:intergenic 25.0%
!!! CTTCTTTTGATATTTGAGAT+CGG - chr8.3:66836545-66836564 None:intergenic 25.0%
!!! GGAATTTTTTGTTTCTTCAT+TGG + chr8.3:66837832-66837851 MS.gene068362:CDS 25.0%
!!! TGTTCAAAGCTTTTTTGAAT+CGG + chr8.3:66836437-66836456 MS.gene068362:CDS 25.0%
AAATGTATTATGAGGGTTCT+TGG + chr8.3:66836789-66836808 MS.gene068362:CDS 30.0%
ATATGATCCTCAAAAAACTC+AGG - chr8.3:66835769-66835788 None:intergenic 30.0%
GATCATATGAATGAATGGAT+GGG + chr8.3:66835781-66835800 MS.gene068362:CDS 30.0%
TAATGAGTATCCAATGCTTA+AGG + chr8.3:66836491-66836510 MS.gene068362:CDS 30.0%
TATCAAAAGAAGTAGCATTG+AGG + chr8.3:66836553-66836572 MS.gene068362:CDS 30.0%
TCAAATATCTGCATGTAGAT+TGG - chr8.3:66837107-66837126 None:intergenic 30.0%
TCTTTATATGGAGAAGAATG+AGG + chr8.3:66835909-66835928 MS.gene068362:CDS 30.0%
TGAAGAAACAAAAAATTCCC+GGG - chr8.3:66837831-66837850 None:intergenic 30.0%
TTGAGAAAAATCTCAAGCAA+AGG - chr8.3:66835619-66835638 None:intergenic 30.0%
TTGAGGATCATATGAATGAA+TGG + chr8.3:66835776-66835795 MS.gene068362:CDS 30.0%
! ATTGAGGTTTTTACCTGATT+TGG + chr8.3:66836569-66836588 MS.gene068362:CDS 30.0%
!! GCTTGATTTGAAGTATTGTT+TGG + chr8.3:66835579-66835598 MS.gene068362:CDS 30.0%
!! TGTTCATCATAGTTTGTTTG+CGG + chr8.3:66836062-66836081 MS.gene068362:CDS 30.0%
!!! GGTTTTGATTTGTTCCTTTT+CGG - chr8.3:66835320-66835339 None:intergenic 30.0%
AAGGTAGTGATCTTGATACA+AGG + chr8.3:66836202-66836221 MS.gene068362:CDS 35.0%
AATATCTGCATGTAGATTGG+TGG - chr8.3:66837104-66837123 None:intergenic 35.0%
AATTTCTGCGACTCAAAAAG+CGG - chr8.3:66835706-66835725 None:intergenic 35.0%
ACAGTATTATTTCAAGCCGA+GGG - chr8.3:66837004-66837023 None:intergenic 35.0%
ACTAAATATATCAGGCTGGA+CGG - chr8.3:66837498-66837517 None:intergenic 35.0%
ACTAGTTATCCTTCTCTTGA+GGG + chr8.3:66835826-66835845 MS.gene068362:CDS 35.0%
ACTCTTAATAGTAAAGGACG+AGG + chr8.3:66836653-66836672 MS.gene068362:CDS 35.0%
ATATCTGCATGTAGATTGGT+GGG - chr8.3:66837103-66837122 None:intergenic 35.0%
ATTATACCGCAGATTTGTCA+GGG + chr8.3:66836093-66836112 MS.gene068362:CDS 35.0%
ATTGCTTGTGAGTTGCTTAA+GGG + chr8.3:66836231-66836250 MS.gene068362:CDS 35.0%
CAAAAACAGACACAAGAGTT+GGG - chr8.3:66836968-66836987 None:intergenic 35.0%
CAAGGATTGTGCGATATATT+TGG + chr8.3:66836356-66836375 MS.gene068362:CDS 35.0%
CAAGTAACTGAAATGCGTAT+GGG - chr8.3:66837049-66837068 None:intergenic 35.0%
CCAGATATTGCAGAAAATGT+AGG + chr8.3:66837731-66837750 MS.gene068362:CDS 35.0%
CCAGTAATCAGCTTAAGATT+CGG - chr8.3:66837545-66837564 None:intergenic 35.0%
CTCTTAATAGTAAAGGACGA+GGG + chr8.3:66836654-66836673 MS.gene068362:CDS 35.0%
GAAGAAACAAAAAATTCCCG+GGG - chr8.3:66837830-66837849 None:intergenic 35.0%
GATATTCAGTTCACTGTTTC+TGG + chr8.3:66837433-66837452 MS.gene068362:CDS 35.0%
GATCATTAATATCTGGAAGG+GGG - chr8.3:66837808-66837827 None:intergenic 35.0%
GCCTTATGTTTCTCACATTT+GGG + chr8.3:66837352-66837371 MS.gene068362:CDS 35.0%
GGATCATATGAATGAATGGA+TGG + chr8.3:66835780-66835799 MS.gene068362:CDS 35.0%
GGATCATTAATATCTGGAAG+GGG - chr8.3:66837809-66837828 None:intergenic 35.0%
GGGATCATTAATATCTGGAA+GGG - chr8.3:66837810-66837829 None:intergenic 35.0%
GTATTGTGACACTTCTTTCT+CGG + chr8.3:66837672-66837691 MS.gene068362:CDS 35.0%
GTCAAATATGCCAAGTACTT+TGG - chr8.3:66837246-66837265 None:intergenic 35.0%
TACTAGTTATCCTTCTCTTG+AGG + chr8.3:66835825-66835844 MS.gene068362:CDS 35.0%
TATATTAGGAGGGATATGGA+AGG + chr8.3:66836183-66836202 MS.gene068362:CDS 35.0%
TCAAAAACAGACACAAGAGT+TGG - chr8.3:66836969-66836988 None:intergenic 35.0%
TGAATATCAAGAGAGACTTG+AGG - chr8.3:66837421-66837440 None:intergenic 35.0%
TGAGTATATTAGGAGGGATA+TGG + chr8.3:66836179-66836198 MS.gene068362:CDS 35.0%
TTATATGGAGAAGAATGAGG+AGG + chr8.3:66835912-66835931 MS.gene068362:CDS 35.0%
TTCCAGATATTAATGATCCC+CGG + chr8.3:66837810-66837829 MS.gene068362:CDS 35.0%
TTGAACATCAACAAGATCTG+TGG - chr8.3:66836424-66836443 None:intergenic 35.0%
! AAACAGATAATGGTTGAAGG+TGG - chr8.3:66836904-66836923 None:intergenic 35.0%
! AACAGATAATGGTTGAAGGT+GGG - chr8.3:66836903-66836922 None:intergenic 35.0%
! ACCATTGATTGAAGCGTAAT+CGG - chr8.3:66835494-66835513 None:intergenic 35.0%
! CCTACATTTTCTGCAATATC+TGG - chr8.3:66837734-66837753 None:intergenic 35.0%
! CTCAAACAGATAATGGTTGA+AGG - chr8.3:66836907-66836926 None:intergenic 35.0%
! GGCAATTAAGTTTTTGACGA+CGG + chr8.3:66836029-66836048 MS.gene068362:CDS 35.0%
! TTCATCAGCATTGAGAAAAC+TGG - chr8.3:66836714-66836733 None:intergenic 35.0%
! TTCTTTTGTCACCTGATTCT+TGG + chr8.3:66837129-66837148 MS.gene068362:CDS 35.0%
!! AAAAGCGGTTTTAGTGTTTC+TGG - chr8.3:66835691-66835710 None:intergenic 35.0%
!! CTACTGACTCAAACAGATAA+TGG - chr8.3:66836914-66836933 None:intergenic 35.0%
!! CTTGTTGCTAGTCTTCAAAA+AGG + chr8.3:66835457-66835476 MS.gene068362:CDS 35.0%
AACTAATGCTCGGTTGTAAG+TGG - chr8.3:66837951-66837970 None:intergenic 40.0%
AAGATCTGTGGAGACATAAC+CGG - chr8.3:66836412-66836431 None:intergenic 40.0%
AAGATTCGGAATCCAGAACT+GGG - chr8.3:66837531-66837550 None:intergenic 40.0%
AAGCTCCTTTAATGCAAACC+CGG + chr8.3:66836317-66836336 MS.gene068362:CDS 40.0%
AATCTGCGGTATAATCCCAT+CGG - chr8.3:66836088-66836107 None:intergenic 40.0%
ACATTTGCAGTGATGACTTG+AGG - chr8.3:66837890-66837909 None:intergenic 40.0%
AGAGGAATTGGAGAGTTTGT+TGG - chr8.3:66835078-66835097 None:intergenic 40.0%
AGCATTGTAAAGTTGGACGA+AGG - chr8.3:66837768-66837787 None:intergenic 40.0%
AGTCGCAGAAATTGTGTTGT+AGG + chr8.3:66835713-66835732 MS.gene068362:CDS 40.0%
ATCACGATTTCCCCAAATCA+TGG + chr8.3:66835416-66835435 MS.gene068362:CDS 40.0%
ATGAATGGATGGGTGAGTTT+AGG + chr8.3:66835791-66835810 MS.gene068362:CDS 40.0%
ATTGTAAAGTTGGACGAAGG+TGG - chr8.3:66837765-66837784 None:intergenic 40.0%
CATTTGCAGTGATGACTTGA+GGG - chr8.3:66837889-66837908 None:intergenic 40.0%
CCGAATCTTAAGCTGATTAC+TGG + chr8.3:66837542-66837561 MS.gene068362:CDS 40.0%
CGCCTTATGTTTCTCACATT+TGG + chr8.3:66837351-66837370 MS.gene068362:CDS 40.0%
CTAGTTATCCTTCTCTTGAG+GGG + chr8.3:66835827-66835846 MS.gene068362:CDS 40.0%
GAAGAATGAGGAGGAGTTTA+AGG + chr8.3:66835921-66835940 MS.gene068362:CDS 40.0%
GACAGTATTATTTCAAGCCG+AGG - chr8.3:66837005-66837024 None:intergenic 40.0%
GATTATACCGCAGATTTGTC+AGG + chr8.3:66836092-66836111 MS.gene068362:CDS 40.0%
GATTGCTTGTGAGTTGCTTA+AGG + chr8.3:66836230-66836249 MS.gene068362:CDS 40.0%
GCAAGTAACTGAAATGCGTA+TGG - chr8.3:66837050-66837069 None:intergenic 40.0%
GCCCAAATGTGAGAAACATA+AGG - chr8.3:66837356-66837375 None:intergenic 40.0%
GGATTGTGCGATATATTTGG+TGG + chr8.3:66836359-66836378 MS.gene068362:CDS 40.0%
GGGGATCATTAATATCTGGA+AGG - chr8.3:66837811-66837830 None:intergenic 40.0%
GGTCTCTCTTTCTACAAAGA+AGG + chr8.3:66836380-66836399 MS.gene068362:CDS 40.0%
GTAGTGATCTTGATACAAGG+AGG + chr8.3:66836205-66836224 MS.gene068362:CDS 40.0%
GTTGCTCGAATTTGCATTGA+GGG + chr8.3:66836834-66836853 MS.gene068362:CDS 40.0%
TAAGATTCGGAATCCAGAAC+TGG - chr8.3:66837532-66837551 None:intergenic 40.0%
TATCTGTTTGAGTCAGTAGC+CGG + chr8.3:66836915-66836934 MS.gene068362:CDS 40.0%
TCCAACTTTACAATGCTGGA+AGG + chr8.3:66837771-66837790 MS.gene068362:CDS 40.0%
TCCAGATATTAATGATCCCC+GGG + chr8.3:66837811-66837830 MS.gene068362:CDS 40.0%
TCCGATTACGCTTCAATCAA+TGG + chr8.3:66835490-66835509 MS.gene068362:CDS 40.0%
TCCTTCCAGCATTGTAAAGT+TGG - chr8.3:66837775-66837794 None:intergenic 40.0%
TCGCACTAAATATATCAGGC+TGG - chr8.3:66837502-66837521 None:intergenic 40.0%
TGAAGACTAGCAACAAGTTC+CGG - chr8.3:66835454-66835473 None:intergenic 40.0%
TGTTGCTCGAATTTGCATTG+AGG + chr8.3:66836833-66836852 MS.gene068362:CDS 40.0%
TTAATAGTAAAGGACGAGGG+TGG + chr8.3:66836657-66836676 MS.gene068362:CDS 40.0%
TTATACCGCAGATTTGTCAG+GGG + chr8.3:66836094-66836113 MS.gene068362:CDS 40.0%
TTATTTCAAGCCGAGGGAAA+AGG - chr8.3:66836998-66837017 None:intergenic 40.0%
TTCGTCCAACTTTACAATGC+TGG + chr8.3:66837767-66837786 MS.gene068362:CDS 40.0%
TTGCTCGAATTTGCATTGAG+GGG + chr8.3:66836835-66836854 MS.gene068362:CDS 40.0%
TTGCTGTGTGGACTTTGTTA+GGG + chr8.3:66835965-66835984 MS.gene068362:CDS 40.0%
TTGCTTGTGAGTTGCTTAAG+GGG + chr8.3:66836232-66836251 MS.gene068362:CDS 40.0%
! ACAGATAATGGTTGAAGGTG+GGG - chr8.3:66836902-66836921 None:intergenic 40.0%
! ACTGATTCTCTTCAGACTCT+GGG - chr8.3:66836761-66836780 None:intergenic 40.0%
! CTGAGATTGGATTTTGTTGG+TGG - chr8.3:66835368-66835387 None:intergenic 40.0%
! GAGCTGAGATTGGATTTTGT+TGG - chr8.3:66835371-66835390 None:intergenic 40.0%
! GATAGACTGACCAAAGTACT+TGG + chr8.3:66837233-66837252 MS.gene068362:CDS 40.0%
! TTGAAACAAGCCTTTTCCCT+CGG + chr8.3:66836985-66837004 MS.gene068362:CDS 40.0%
! TTTGTTCCTTTTCGGAATCG+AGG - chr8.3:66835312-66835331 None:intergenic 40.0%
!! AGATTGGATTTTGTTGGTGG+CGG - chr8.3:66835365-66835384 None:intergenic 40.0%
!! TACTGATTCTCTTCAGACTC+TGG - chr8.3:66836762-66836781 None:intergenic 40.0%
!! TCACTGTTTCTGGTTAAGCA+TGG + chr8.3:66837443-66837462 MS.gene068362:CDS 40.0%
!! TTTTTAGAGAGCTCCAGAGA+AGG + chr8.3:66837381-66837400 MS.gene068362:CDS 40.0%
!!! ACATCTGCTTTTTGCAACTC+AGG - chr8.3:66836471-66836490 None:intergenic 40.0%
!!! AGAGTTGCCTGAGTTTTTTG+AGG + chr8.3:66835759-66835778 MS.gene068362:CDS 40.0%
!!! ATGATTTTGCACTTGCTGTG+TGG + chr8.3:66835953-66835972 MS.gene068362:CDS 40.0%
!!! ATTTGGTGCCTTTTGAAGGA+AGG - chr8.3:66837198-66837217 None:intergenic 40.0%
!!! CATCTGCTTTTTGCAACTCA+GGG - chr8.3:66836470-66836489 None:intergenic 40.0%
!!! GAGGTGGTTTTTGAAGTTGA+CGG - chr8.3:66835257-66835276 None:intergenic 40.0%
!!! GTTTTAGTGTTTCTGGTGGT+GGG - chr8.3:66835684-66835703 None:intergenic 40.0%
!!! TCTCATTTGGTGCCTTTTGA+AGG - chr8.3:66837202-66837221 None:intergenic 40.0%
!!! TTTTAGTGTTTCTGGTGGTG+GGG - chr8.3:66835683-66835702 None:intergenic 40.0%
ACAATCCCCTGACAAATCTG+CGG - chr8.3:66836102-66836121 None:intergenic 45.0%
ACCAAATGAGATCAGCCAAG+GGG + chr8.3:66837211-66837230 MS.gene068362:CDS 45.0%
CACCAAATGAGATCAGCCAA+GGG + chr8.3:66837210-66837229 MS.gene068362:CDS 45.0%
CGAATTTGCATTGAGGGGTT+GGG + chr8.3:66836840-66836859 MS.gene068362:CDS 45.0%
GAATTTGCATTGAGGGGTTG+GGG + chr8.3:66836841-66836860 MS.gene068362:CDS 45.0%
GAGGATTGGGTTATCTTCAG+CGG - chr8.3:66835293-66835312 None:intergenic 45.0%
GAGTATCCAATGCTTAAGGC+AGG + chr8.3:66836495-66836514 MS.gene068362:CDS 45.0%
GATTCCGAATGTGAGGTTGA+GGG + chr8.3:66836122-66836141 MS.gene068362:CDS 45.0%
GCAAGGAAACGAACCAAATC+AGG - chr8.3:66836585-66836604 None:intergenic 45.0%
GCATCAAGCACTTCTGATCA+AGG + chr8.3:66837278-66837297 MS.gene068362:CDS 45.0%
GGATTGTGATTCCGAATGTG+AGG + chr8.3:66836115-66836134 MS.gene068362:CDS 45.0%
GTGATCTTGATACAAGGAGG+AGG + chr8.3:66836208-66836227 MS.gene068362:CDS 45.0%
GTGATTCCCGATGATAGCTA+AGG - chr8.3:66835401-66835420 None:intergenic 45.0%
TCCCGGGGATCATTAATATC+TGG - chr8.3:66837815-66837834 None:intergenic 45.0%
TCCGAAGCCTTAGCTATCAT+CGG + chr8.3:66835391-66835410 MS.gene068362:CDS 45.0%
TCGAATTTGCATTGAGGGGT+TGG + chr8.3:66836839-66836858 MS.gene068362:CDS 45.0%
TCTACAAAGAAGGCTGCAAC+CGG + chr8.3:66836390-66836409 MS.gene068362:CDS 45.0%
TCTGCAATATCTGGCATGTC+AGG - chr8.3:66837725-66837744 None:intergenic 45.0%
TGATTCCGAATGTGAGGTTG+AGG + chr8.3:66836121-66836140 MS.gene068362:CDS 45.0%
TGCATGTAGATTGGTGGGAT+GGG - chr8.3:66837098-66837117 None:intergenic 45.0%
TGCTCTTGTGGATGAGCTTA+GGG + chr8.3:66835864-66835883 MS.gene068362:CDS 45.0%
TGGAGACTCACAAATGAGTC+TGG - chr8.3:66837603-66837622 None:intergenic 45.0%
TTCTCGGCAAGAACAAGACA+GGG + chr8.3:66837688-66837707 MS.gene068362:CDS 45.0%
TTCTGCATCCTGGGGTAAAA+TGG + chr8.3:66837643-66837662 MS.gene068362:CDS 45.0%
TTGCTCTTGTGGATGAGCTT+AGG + chr8.3:66835863-66835882 MS.gene068362:CDS 45.0%
TTGTGAGTCTCCAGTACTTC+TGG + chr8.3:66837610-66837629 MS.gene068362:CDS 45.0%
TTTCTCGGCAAGAACAAGAC+AGG + chr8.3:66837687-66837706 MS.gene068362:CDS 45.0%
! AGAGCATGAGAGGTACGATT+AGG - chr8.3:66835342-66835361 None:intergenic 45.0%
! CCTTTTCGGAATCGAGGATT+GGG - chr8.3:66835306-66835325 None:intergenic 45.0%
! CTTGCTGTGTGGACTTTGTT+AGG + chr8.3:66835964-66835983 MS.gene068362:CDS 45.0%
! GAGCATGAGAGGTACGATTA+GGG - chr8.3:66835341-66835360 None:intergenic 45.0%
! GCGCTTCTTTTCCAAGAATC+AGG - chr8.3:66837143-66837162 None:intergenic 45.0%
! TCCTTTTCGGAATCGAGGAT+TGG - chr8.3:66835307-66835326 None:intergenic 45.0%
! TTCAGACTCTGGGAGCTTAA+AGG - chr8.3:66836751-66836770 None:intergenic 45.0%
! TTTGGTTCGTTTCCTTGCTG+CGG + chr8.3:66836587-66836606 MS.gene068362:CDS 45.0%
!! ATAGTTTGTTTGCGGCCGAT+GGG + chr8.3:66836070-66836089 MS.gene068362:CDS 45.0%
!! TTTAGTGTTTCTGGTGGTGG+GGG - chr8.3:66835682-66835701 None:intergenic 45.0%
!!! AGCGGTTTTAGTGTTTCTGG+TGG - chr8.3:66835688-66835707 None:intergenic 45.0%
!!! GGTTTTAGTGTTTCTGGTGG+TGG - chr8.3:66835685-66835704 None:intergenic 45.0%
!!! GTTTTTGAAGTTGACGGCAG+CGG - chr8.3:66835251-66835270 None:intergenic 45.0%
!!! TGGTTGAAGGTGGGGTTTTT+TGG - chr8.3:66836894-66836913 None:intergenic 45.0%
AACAAGTTCCGGAAGAAGCG+AGG - chr8.3:66835443-66835462 None:intergenic 50.0%
AAGAAGCGAGGGCCATGATT+TGG - chr8.3:66835431-66835450 None:intergenic 50.0%
AAGGGGATTGCTACGCGTTA+TGG + chr8.3:66836249-66836268 MS.gene068362:CDS 50.0%
ACAAGTTCCGGAAGAAGCGA+GGG - chr8.3:66835442-66835461 None:intergenic 50.0%
ACTCCAGGCCTTCCTTCAAA+AGG + chr8.3:66837187-66837206 MS.gene068362:CDS 50.0%
AGAACAAGACAGGGTTGAGG+AGG + chr8.3:66837697-66837716 MS.gene068362:CDS 50.0%
AGAAGCGAGGGCCATGATTT+GGG - chr8.3:66835430-66835449 None:intergenic 50.0%
AGCAACGCTGTCTGATTCAC+AGG - chr8.3:66837917-66837936 None:intergenic 50.0%
AGGGAACTGTGCACAAAGCT+GGG - chr8.3:66837858-66837877 None:intergenic 50.0%
AGTGCACCTGCCTTAAGCAT+TGG - chr8.3:66836504-66836523 None:intergenic 50.0%
ATGTAGATTGGTGGGATGGG+TGG - chr8.3:66837095-66837114 None:intergenic 50.0%
CAACATTTGACTCCGCAGCA+AGG - chr8.3:66836602-66836621 None:intergenic 50.0%
CCCAATCCTCGATTCCGAAA+AGG + chr8.3:66835303-66835322 MS.gene068362:CDS 50.0%
CCCGATGATAGCTAAGGCTT+CGG - chr8.3:66835395-66835414 None:intergenic 50.0%
CCGAAGCCTTAGCTATCATC+GGG + chr8.3:66835392-66835411 MS.gene068362:CDS 50.0%
CTCCTTTAATGCAAACCCGG+TGG + chr8.3:66836320-66836339 MS.gene068362:CDS 50.0%
CTGCATGTAGATTGGTGGGA+TGG - chr8.3:66837099-66837118 None:intergenic 50.0%
CTTTGGTCAGTCTATCCCCT+TGG - chr8.3:66837229-66837248 None:intergenic 50.0%
GCAAGAACAAGACAGGGTTG+AGG + chr8.3:66837694-66837713 MS.gene068362:CDS 50.0%
GCACCAAATGAGATCAGCCA+AGG + chr8.3:66837209-66837228 MS.gene068362:CDS 50.0%
GGTTATCTTCAGCGGACCAA+CGG - chr8.3:66835285-66835304 None:intergenic 50.0%
TAATTGCCGTAACCGCAAGC+TGG - chr8.3:66836017-66836036 None:intergenic 50.0%
TATCTGGAAGGGGGTCTTCT+TGG - chr8.3:66837799-66837818 None:intergenic 50.0%
TCCCCTTGGCTGATCTCATT+TGG - chr8.3:66837215-66837234 None:intergenic 50.0%
TCCTCCCTCAACCTCACATT+CGG - chr8.3:66836129-66836148 None:intergenic 50.0%
TGCATCCTGGGGTAAAATGG+TGG + chr8.3:66837646-66837665 MS.gene068362:CDS 50.0%
TTAGAGAGCTCCAGAGAAGG+CGG + chr8.3:66837384-66837403 MS.gene068362:CDS 50.0%
TTGTCCTTCCAATTCGCCAC+CGG - chr8.3:66836339-66836358 None:intergenic 50.0%
! ACTGTCCACCATTTTACCCC+AGG - chr8.3:66837654-66837673 None:intergenic 50.0%
! AGCTTTGTGCACAGTTCCCT+GGG + chr8.3:66837858-66837877 MS.gene068362:CDS 50.0%
! TGCTGATGGTCTTGCTCTTG+TGG + chr8.3:66835852-66835871 MS.gene068362:CDS 50.0%
! TTGACGGATCTGATCGGAGA+TGG - chr8.3:66835227-66835246 None:intergenic 50.0%
!! CATAGTTTGTTTGCGGCCGA+TGG + chr8.3:66836069-66836088 MS.gene068362:CDS 50.0%
!! GAGAGTGTGGAGGAAGCATT+CGG - chr8.3:66835101-66835120 None:intergenic 50.0%
!! GGAAGCATTCGGAGAGGAAT+TGG - chr8.3:66835090-66835109 None:intergenic 50.0%
!! GTGCGATTTTGACCCAGTTC+TGG + chr8.3:66837516-66837535 MS.gene068362:CDS 50.0%
AAAACCACCTCCGTCTCCGT+TGG + chr8.3:66835266-66835285 MS.gene068362:CDS 55.0%
AAACCCGGTGGCGAATTGGA+AGG + chr8.3:66836332-66836351 MS.gene068362:CDS 55.0%
ACGGATCTGATCGGAGATGG+AGG - chr8.3:66835224-66835243 None:intergenic 55.0%
AGAAGCCCGCTTCACAAGAC+CGG - chr8.3:66836937-66836956 None:intergenic 55.0%
AGGCTTCGGAGAGCTGAGAT+TGG - chr8.3:66835381-66835400 None:intergenic 55.0%
ATCATGGCCCTCGCTTCTTC+CGG + chr8.3:66835432-66835451 MS.gene068362:CDS 55.0%
ATCCTGCAGCTTCTGCATCC+TGG + chr8.3:66837633-66837652 MS.gene068362:CDS 55.0%
ATGACTTGAGGGAACCTCCC+AGG - chr8.3:66837878-66837897 None:intergenic 55.0%
ATGCAAACCCGGTGGCGAAT+TGG + chr8.3:66836328-66836347 MS.gene068362:CDS 55.0%
CAGGGAACTGTGCACAAAGC+TGG - chr8.3:66837859-66837878 None:intergenic 55.0%
CGCCACCGGGTTTGCATTAA+AGG - chr8.3:66836325-66836344 None:intergenic 55.0%
CGGATCTGATCGGAGATGGA+GGG - chr8.3:66835223-66835242 None:intergenic 55.0%
GAAGCGAGGGCCATGATTTG+GGG - chr8.3:66835429-66835448 None:intergenic 55.0%
GAGGTTGAGGGAGGATGATG+AGG + chr8.3:66836134-66836153 MS.gene068362:CDS 55.0%
GCTTTACTGTCCGCCTTCTC+TGG - chr8.3:66837397-66837416 None:intergenic 55.0%
GGTGGCGAATTGGAAGGACA+AGG + chr8.3:66836338-66836357 MS.gene068362:CDS 55.0%
TAGTAAAGGACGAGGGTGGC+AGG + chr8.3:66836661-66836680 MS.gene068362:CDS 55.0%
TCAGCACTCCCCTCAAGAGA+AGG - chr8.3:66835838-66835857 None:intergenic 55.0%
TCCGAATGTGAGGTTGAGGG+AGG + chr8.3:66836125-66836144 MS.gene068362:CDS 55.0%
TCCTGCAGCTTCTGCATCCT+GGG + chr8.3:66837634-66837653 MS.gene068362:CDS 55.0%
TCGTGACCAGCTTGCGGTTA+CGG + chr8.3:66836008-66836027 MS.gene068362:CDS 55.0%
TGACTTGAGGGAACCTCCCA+GGG - chr8.3:66837877-66837896 None:intergenic 55.0%
TGTCCTTCCAATTCGCCACC+GGG - chr8.3:66836338-66836357 None:intergenic 55.0%
TTTGTGCACAGTTCCCTGGG+AGG + chr8.3:66837861-66837880 MS.gene068362:CDS 55.0%
! AGCGGCTTGACGGATCTGAT+CGG - chr8.3:66835233-66835252 None:intergenic 55.0%
! AGTAGCCGGTCTTGTGAAGC+GGG + chr8.3:66836929-66836948 MS.gene068362:CDS 55.0%
! CAGCTTTGTGCACAGTTCCC+TGG + chr8.3:66837857-66837876 MS.gene068362:CDS 55.0%
! CAGTAGCCGGTCTTGTGAAG+CGG + chr8.3:66836928-66836947 MS.gene068362:CDS 55.0%
! GACTAGTCGTGACCAGCTTG+CGG + chr8.3:66836002-66836021 MS.gene068362:CDS 55.0%
! GCTGCAGGATCCAGAAGTAC+TGG - chr8.3:66837623-66837642 None:intergenic 55.0%
! TGTGAAGCGGGCTTCTGAGA+GGG + chr8.3:66836941-66836960 MS.gene068362:CDS 55.0%
! TTGTGAAGCGGGCTTCTGAG+AGG + chr8.3:66836940-66836959 MS.gene068362:CDS 55.0%
!! GAAGTTAGGTTGGGAGGAGG+CGG - chr8.3:66835170-66835189 None:intergenic 55.0%
!! GTGCCTTTTGAAGGAAGGCC+TGG - chr8.3:66837193-66837212 None:intergenic 55.0%
!! TCTCTTGAGGGGAGTGCTGA+TGG + chr8.3:66835838-66835857 MS.gene068362:CDS 55.0%
!! TGTGGAGGAAGCATTCGGAG+AGG - chr8.3:66835096-66835115 None:intergenic 55.0%
AGAGAGAGGATTCGGCGTGG+CGG - chr8.3:66835144-66835163 None:intergenic 60.0%
AGGAGAGAGAGGATTCGGCG+TGG - chr8.3:66835147-66835166 None:intergenic 60.0%
AGGCCTGGAGTAGACGCACA+AGG - chr8.3:66837178-66837197 None:intergenic 60.0%
AGTTGACGGCAGCGGCTTGA+CGG - chr8.3:66835243-66835262 None:intergenic 60.0%
CAGGGAGAGGAGAGAGAGTG+TGG - chr8.3:66835114-66835133 None:intergenic 60.0%
CCTGCAGCTTCTGCATCCTG+GGG + chr8.3:66837635-66837654 MS.gene068362:CDS 60.0%
CGCAGCGTCAATCAACGACG+CGG - chr8.3:66835644-66835663 None:intergenic 60.0%
CTTCAGCGGACCAACGGAGA+CGG - chr8.3:66835279-66835298 None:intergenic 60.0%
GAGGGTGGCAGGCTACGTTA+TGG + chr8.3:66836672-66836691 MS.gene068362:CDS 60.0%
GGCCTGGAGTAGACGCACAA+GGG - chr8.3:66837177-66837196 None:intergenic 60.0%
GGCGAGGGCGAAGTTAGGTT+GGG - chr8.3:66835179-66835198 None:intergenic 60.0%
GGCGGAGGAGAGAGAGGATT+CGG - chr8.3:66835152-66835171 None:intergenic 60.0%
TGCCCTTGTGCGTCTACTCC+AGG + chr8.3:66837172-66837191 MS.gene068362:CDS 60.0%
TGGAGGGTTCAGCGACGAGA+CGG - chr8.3:66835207-66835226 None:intergenic 60.0%
TGGAGTAGACGCACAAGGGC+AGG - chr8.3:66837173-66837192 None:intergenic 60.0%
TTCAGCGACGAGACGGAGGA+CGG - chr8.3:66835200-66835219 None:intergenic 60.0%
! CGCGTCGTTGATTGACGCTG+CGG + chr8.3:66835642-66835661 MS.gene068362:CDS 60.0%
! GGAGAGGAGAGAGAGTGTGG+AGG - chr8.3:66835111-66835130 None:intergenic 60.0%
!! AGTGTTTCTGGTGGTGGGGG+CGG - chr8.3:66835679-66835698 None:intergenic 60.0%
!! GAGGGCGAAGTTAGGTTGGG+AGG - chr8.3:66835176-66835195 None:intergenic 60.0%
!! GGCGAAGTTAGGTTGGGAGG+AGG - chr8.3:66835173-66835192 None:intergenic 60.0%
!! TTGGTGGCGGAGAGCATGAG+AGG - chr8.3:66835352-66835371 None:intergenic 60.0%
AGGACGGCGAGGGCGAAGTT+AGG - chr8.3:66835184-66835203 None:intergenic 65.0%
AGGGTTCAGCGACGAGACGG+AGG - chr8.3:66835204-66835223 None:intergenic 65.0%
CCCCAGGATGCAGAAGCTGC+AGG - chr8.3:66837638-66837657 None:intergenic 65.0%
CGGCGAGGGCGAAGTTAGGT+TGG - chr8.3:66835180-66835199 None:intergenic 65.0%
!! GTTAGGTTGGGAGGAGGCGG+AGG - chr8.3:66835167-66835186 None:intergenic 65.0%
AGAGGATTCGGCGTGGCGGC+GGG - chr8.3:66835140-66835159 None:intergenic 70.0%
CAGCGGACCAACGGAGACGG+AGG - chr8.3:66835276-66835295 None:intergenic 70.0%
CGGACCAACGGAGACGGAGG+TGG - chr8.3:66835273-66835292 None:intergenic 70.0%
GACGAGACGGAGGACGGCGA+GGG - chr8.3:66835194-66835213 None:intergenic 70.0%
GAGAGGATTCGGCGTGGCGG+CGG - chr8.3:66835141-66835160 None:intergenic 70.0%
GGAGGAGGCGGAGGAGAGAG+AGG - chr8.3:66835158-66835177 None:intergenic 70.0%
CGACGAGACGGAGGACGGCG+AGG - chr8.3:66835195-66835214 None:intergenic 75.0%
GAGGATTCGGCGTGGCGGCG+GGG - chr8.3:66835139-66835158 None:intergenic 75.0%
TGGCGGCGGGGTTCAGGGAG+AGG - chr8.3:66835127-66835146 None:intergenic 75.0%
! CGGCGTGGCGGCGGGGTTCA+GGG - chr8.3:66835132-66835151 None:intergenic 80.0%
! TCGGCGTGGCGGCGGGGTTC+AGG - chr8.3:66835133-66835152 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 66835064 66837973 66835064 ID=MS.gene068362
chr8.3 mRNA 66835064 66837973 66835064 ID=MS.gene068362.t1;Parent=MS.gene068362
chr8.3 exon 66835064 66837973 66835064 ID=MS.gene068362.t1.exon1;Parent=MS.gene068362.t1
chr8.3 CDS 66835064 66837973 66835064 ID=cds.MS.gene068362.t1;Parent=MS.gene068362.t1
Gene Sequence

>MS.gene068362

ATGGAATGGAACCAACAAACTCTCCAATTCCTCTCCGAATGCTTCCTCCACACTCTCTCTCCTCTCCCTGAACCCCGCCGCCACGCCGAATCCTCTCTCTCCTCCGCCTCCTCCCAACCTAACTTCGCCCTCGCCGTCCTCCGTCTCGTCGCTGAACCCTCCATCTCCGATCAGATCCGTCAAGCCGCTGCCGTCAACTTCAAAAACCACCTCCGTCTCCGTTGGTCCGCTGAAGATAACCCAATCCTCGATTCCGAAAAGGAACAAATCAAAACCCTAATCGTACCTCTCATGCTCTCCGCCACCAACAAAATCCAATCTCAGCTCTCCGAAGCCTTAGCTATCATCGGGAATCACGATTTCCCCAAATCATGGCCCTCGCTTCTTCCGGAACTTGTTGCTAGTCTTCAAAAAGGTTCTCAGAGTTCCGATTACGCTTCAATCAATGGTATTCTCAGTACCGCGAATTCGATTTTTAAGAAATTTCGTTTTCAGTATAAAACTAATGATTTATTGCTTGATTTGAAGTATTGTTTGGATAATTTTGCTGCTCCTTTGCTTGAGATTTTTCTCAAAACCGCGTCGTTGATTGACGCTGCGGCTGCACAGCAGCCGCCCCCACCACCAGAAACACTAAAACCGCTTTTTGAGTCGCAGAAATTGTGTTGTAGGATATTTTTTTCACTGAATTTTCAAGAGTTGCCTGAGTTTTTTGAGGATCATATGAATGAATGGATGGGTGAGTTTAGGAAGTATTTGACTACTAGTTATCCTTCTCTTGAGGGGAGTGCTGATGGTCTTGCTCTTGTGGATGAGCTTAGGGCTGCAGTTTGTGAGAATATTAATCTTTATATGGAGAAGAATGAGGAGGAGTTTAAGGTTTTTTTGAATGATTTTGCACTTGCTGTGTGGACTTTGTTAGGGAATGTGTCGCAGTCGACTAGTCGTGACCAGCTTGCGGTTACGGCAATTAAGTTTTTGACGACGGTTAGTACGAGTGTTCATCATAGTTTGTTTGCGGCCGATGGGATTATACCGCAGATTTGTCAGGGGATTGTGATTCCGAATGTGAGGTTGAGGGAGGATGATGAGGAGTTGTTTGAGATGAATCATATTGAGTATATTAGGAGGGATATGGAAGGTAGTGATCTTGATACAAGGAGGAGGATTGCTTGTGAGTTGCTTAAGGGGATTGCTACGCGTTATGGAGATGCTGTTAGAAGCATTGTTTCTGCGCAAGTACAGAGTTTGTTAAGCTCCTTTAATGCAAACCCGGTGGCGAATTGGAAGGACAAGGATTGTGCGATATATTTGGTGGTCTCTCTTTCTACAAAGAAGGCTGCAACCGGTTATGTCTCCACAGATCTTGTTGATGTTCAAAGCTTTTTTGAATCGGTGATTGTCCCTGAGTTGCAAAAAGCAGATGTTAATGAGTATCCAATGCTTAAGGCAGGTGCACTCAAGTTCTTTACTATGTTCCGATCTCAAATATCAAAAGAAGTAGCATTGAGGTTTTTACCTGATTTGGTTCGTTTCCTTGCTGCGGAGTCAAATGTTGTTCATTCTTATGCTGCTAGCTGTATTGAGAAACTCTTAATAGTAAAGGACGAGGGTGGCAGGCTACGTTATGGTTCAGCAGATATCGCTCCAGTTTTCTCAATGCTGATGAACAATCTTTTCAGTGCCTTTAAGCTCCCAGAGTCTGAAGAGAATCAGTATGTTATGAAATGTATTATGAGGGTTCTTGGTGTTGCAGATATACAACTTGATGTTGCTCGAATTTGCATTGAGGGGTTGGGGTCAATTCTTTCTGAAGTTTGCAGAAATCCAAAAAACCCCACCTTCAACCATTATCTGTTTGAGTCAGTAGCCGGTCTTGTGAAGCGGGCTTCTGAGAGGGACCCAACTCTTGTGTCTGTTTTTGAAACAAGCCTTTTCCCTCGGCTTGAAATAATACTGTCCAATGATGTAACTGAATTTTTCCCATACGCATTTCAGTTACTTGCTCTGCTTGTTGAGTTAAACAGACCACCCATCCCACCAATCTACATGCAGATATTTGAGATTCTTTTGTCACCTGATTCTTGGAAAAGAAGCGCAAGCGTTCCTGCCCTTGTGCGTCTACTCCAGGCCTTCCTTCAAAAGGCACCAAATGAGATCAGCCAAGGGGATAGACTGACCAAAGTACTTGGCATATTTGACACGCTAATACAAGCATCAAGCACTTCTGATCAAGGATTCTACGTGCTTAACACAGTCATTGAAAGTCTTCAGTATGATGTTCTTACGCCTTATGTTTCTCACATTTGGGCTGCTATTTTTAGAGAGCTCCAGAGAAGGCGGACAGTAAAGCTCCTCAAGTCTCTCTTGATATTCAGTTCACTGTTTCTGGTTAAGCATGGTTCTGCAAATCTAGTTAATACTATGAATGCCGTCCAGCCTGATATATTTAGTGCGATTTTGACCCAGTTCTGGATTCCGAATCTTAAGCTGATTACTGGAACTATAGAGCTCAAACTGACTGCAGTTGCTTCAACCAGACTCATTTGTGAGTCTCCAGTACTTCTGGATCCTGCAGCTTCTGCATCCTGGGGTAAAATGGTGGACAGTATTGTGACACTTCTTTCTCGGCAAGAACAAGACAGGGTTGAGGAGGAGCCTGACATGCCAGATATTGCAGAAAATGTAGGTTATACTGCCACCTTCGTCCAACTTTACAATGCTGGAAGGAACCAAGAAGACCCCCTTCCAGATATTAATGATCCCCGGGAATTTTTTGTTTCTTCATTGGCCCAGCTTTGTGCACAGTTCCCTGGGAGGTTCCCTCAAGTCATCACTGCAAATGTTGATCCTGTGAATCAGACAGCGTTGCTTCAACTTTGCACCACTTACAACCGAGCATTAGTTTGA

Protein sequence

>MS.gene068362.t1

MEWNQQTLQFLSECFLHTLSPLPEPRRHAESSLSSASSQPNFALAVLRLVAEPSISDQIRQAAAVNFKNHLRLRWSAEDNPILDSEKEQIKTLIVPLMLSATNKIQSQLSEALAIIGNHDFPKSWPSLLPELVASLQKGSQSSDYASINGILSTANSIFKKFRFQYKTNDLLLDLKYCLDNFAAPLLEIFLKTASLIDAAAAQQPPPPPETLKPLFESQKLCCRIFFSLNFQELPEFFEDHMNEWMGEFRKYLTTSYPSLEGSADGLALVDELRAAVCENINLYMEKNEEEFKVFLNDFALAVWTLLGNVSQSTSRDQLAVTAIKFLTTVSTSVHHSLFAADGIIPQICQGIVIPNVRLREDDEELFEMNHIEYIRRDMEGSDLDTRRRIACELLKGIATRYGDAVRSIVSAQVQSLLSSFNANPVANWKDKDCAIYLVVSLSTKKAATGYVSTDLVDVQSFFESVIVPELQKADVNEYPMLKAGALKFFTMFRSQISKEVALRFLPDLVRFLAAESNVVHSYAASCIEKLLIVKDEGGRLRYGSADIAPVFSMLMNNLFSAFKLPESEENQYVMKCIMRVLGVADIQLDVARICIEGLGSILSEVCRNPKNPTFNHYLFESVAGLVKRASERDPTLVSVFETSLFPRLEIILSNDVTEFFPYAFQLLALLVELNRPPIPPIYMQIFEILLSPDSWKRSASVPALVRLLQAFLQKAPNEISQGDRLTKVLGIFDTLIQASSTSDQGFYVLNTVIESLQYDVLTPYVSHIWAAIFRELQRRRTVKLLKSLLIFSSLFLVKHGSANLVNTMNAVQPDIFSAILTQFWIPNLKLITGTIELKLTAVASTRLICESPVLLDPAASASWGKMVDSIVTLLSRQEQDRVEEEPDMPDIAENVGYTATFVQLYNAGRNQEDPLPDINDPREFFVSSLAQLCAQFPGRFPQVITANVDPVNQTALLQLCTTYNRALV