AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene068945


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068945.t1 MTR_2g101360 50.716 489 234 5 1 486 68 552 1.61e-159 466
MS.gene068945.t1 MTR_8g103380 49.199 437 212 4 68 498 18 450 2.74e-153 446
MS.gene068945.t1 MTR_8g103380 49.309 434 210 4 68 495 18 447 4.27e-152 445
MS.gene068945.t1 MTR_8g103380 49.309 434 210 4 68 495 191 620 1.77e-150 447
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068945.t1 AT4G21900 60.532 489 178 6 14 488 89 576 0.0 616
MS.gene068945.t1 AT2G16650 61.341 507 180 7 5 497 21 525 0.0 613
MS.gene068945.t1 AT2G16650 63.318 428 142 6 83 497 1 426 0.0 528
MS.gene068945.t1 AT2G32230 49.897 487 234 6 5 486 88 569 6.62e-153 450
MS.gene068945.t1 AT2G32230 49.897 487 234 6 5 486 88 569 6.62e-153 450
MS.gene068945.t1 AT5G60430 60.504 119 40 1 225 336 2 120 6.60e-33 123
MS.gene068945.t1 AT5G60430 60.504 119 40 1 225 336 2 120 6.60e-33 123
MS.gene068945.t1 AT5G60430 60.504 119 40 1 225 336 2 120 6.60e-33 123
MS.gene068945.t1 AT5G60430 60.504 119 40 1 225 336 2 120 6.60e-33 123

Find 143 sgRNAs with CRISPR-Local

Find 340 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCTAAGGCGAGTTGTTTA+AGG 0.210010 8.1:-58290424 None:intergenic
CTTCGTTAGGGGTGATGTTT+AGG 0.218571 8.1:-58290478 None:intergenic
GGAGGAGGGTGGCATGGTTT+AGG 0.223253 8.1:+58290920 MS.gene068945:CDS
AAACAACTCGCCTTAGATTA+TGG 0.245229 8.1:+58290428 MS.gene068945:CDS
ATTTGGATGTGACGAGGGTT+AGG 0.280128 8.1:+58290879 MS.gene068945:CDS
GAGGAGGGTGGCATGGTTTA+GGG 0.283466 8.1:+58290921 MS.gene068945:CDS
CATATGTTCCTCAACTTCAT+AGG 0.289354 8.1:-58290660 None:intergenic
TTTGTTCTCTGGGGTTTGAT+TGG 0.297283 8.1:-58290249 None:intergenic
GAGGGTGGCATGGTTTAGGG+TGG 0.304661 8.1:+58290924 MS.gene068945:CDS
ACCTGGATTACCAACGAATA+TGG 0.319197 8.1:-58293718 None:intergenic
GAATAGTGTTGGGGTTAGTT+TGG 0.320057 8.1:+58290682 MS.gene068945:CDS
TGCTTCATCTGTTGCTGCAT+TGG 0.327898 8.1:+58291063 MS.gene068945:CDS
TCGAATTGGAATTTGTTCTC+TGG 0.331533 8.1:-58290260 None:intergenic
CAATCATCATTCGATCCATT+TGG 0.336968 8.1:-58291886 None:intergenic
TTCGTTAGGGGTGATGTTTA+GGG 0.345807 8.1:-58290477 None:intergenic
TTTAGGGTGGGTTGGAAAAG+GGG 0.350033 8.1:+58290937 MS.gene068945:CDS
TATGCGAAAACCATAATCTA+AGG 0.351826 8.1:-58290438 None:intergenic
CGAATTGGAATTTGTTCTCT+GGG 0.354639 8.1:-58290259 None:intergenic
CAAAGAAGGGTAGGGCTGAT+AGG 0.358183 8.1:+58290741 MS.gene068945:CDS
GTTTAGGGTGGGTTGGAAAA+GGG 0.362828 8.1:+58290936 MS.gene068945:CDS
AACATTTGCACCATCCACTA+TGG 0.363444 8.1:-58291511 None:intergenic
GGTTTAGGGTGGGTTGGAAA+AGG 0.369674 8.1:+58290935 MS.gene068945:CDS
TCTAATGGTGTGGATACTTC+TGG 0.370224 8.1:+58294219 MS.gene068945:CDS
GTGTTGCAGGAATCGGAAAA+AGG 0.377090 8.1:+58294099 MS.gene068945:intron
GCCGCGGAAGTCCTTTGATT+TGG 0.380691 8.1:-58290297 None:intergenic
AAATCCTTCCAGCCGAAAAC+TGG 0.394261 8.1:+58291825 MS.gene068945:CDS
CCTGATGTCTTTCTTTCCAC+TGG 0.397508 8.1:-58293232 None:intergenic
GGTGGGTTGGAAAAGGGGAT+TGG 0.397522 8.1:+58290942 MS.gene068945:CDS
ATCTAAGGCGAGTTGTTTAA+GGG 0.405422 8.1:-58290423 None:intergenic
GTGGGTTGGAAAAGGGGATT+GGG 0.408473 8.1:+58290943 MS.gene068945:CDS
TTGTGGATGTGGTGAGCAAT+TGG 0.408916 8.1:+58291003 MS.gene068945:CDS
GTGGCAACAGTGGCTTCGTT+AGG 0.410578 8.1:-58290491 None:intergenic
ATCTGTTGCTGCATTGGCTG+TGG 0.410633 8.1:+58291069 MS.gene068945:CDS
AGGATCATGGCATGTGCCTT+TGG 0.413606 8.1:+58294119 MS.gene068945:CDS
GCGAGACTCGCTGCAGCTAA+TGG 0.416544 8.1:+58290518 MS.gene068945:CDS
GGATCATAAGTCCGTAGTCT+AGG 0.416860 8.1:-58290596 None:intergenic
AACATGAATTGAGCTCGAAT+TGG 0.421444 8.1:-58290274 None:intergenic
CGGTGGATTTAGCACTAATC+AGG 0.426363 8.1:+58291560 MS.gene068945:CDS
TTTGGATGTGACGAGGGTTA+GGG 0.432494 8.1:+58290880 MS.gene068945:CDS
TGTGACGAGGGTTAGGGAGG+CGG 0.434187 8.1:+58290886 MS.gene068945:CDS
TGGCAACAGTGGCTTCGTTA+GGG 0.437806 8.1:-58290490 None:intergenic
TTTGAAGGTTAGTGCAAAGA+AGG 0.440672 8.1:+58290727 MS.gene068945:CDS
TGGTGACCGTGCATTCGAAT+TGG 0.444670 8.1:+58290544 MS.gene068945:CDS
ACCATATTCGTTGGTAATCC+AGG 0.461673 8.1:+58293717 MS.gene068945:CDS
AGGAACATATGAATAGTGTT+GGG 0.463100 8.1:+58290672 MS.gene068945:CDS
CAAATGGATCGAATGATGAT+TGG 0.465471 8.1:+58291887 MS.gene068945:CDS
GATGATGATGGGATTTGTTG+TGG 0.467714 8.1:+58290986 MS.gene068945:CDS
AGGAATGGAGGAGGGTGGCA+TGG 0.470097 8.1:+58290914 MS.gene068945:CDS
GGCTGTGGAGCGTGAGGTCA+AGG 0.470519 8.1:+58291084 MS.gene068945:CDS
GATGGGATTTGTTGTGGATG+TGG 0.474044 8.1:+58290992 MS.gene068945:CDS
CGAGGCGCGTGAGGTTGGTG+AGG 0.480977 8.1:+58290853 MS.gene068945:CDS
GATGCTACTACTGTTTCTAA+TGG 0.482309 8.1:+58294204 MS.gene068945:CDS
GTGCTATATACAACTCCAAA+TGG 0.485855 8.1:+58291871 MS.gene068945:CDS
AGGGTGGCATGGTTTAGGGT+GGG 0.486363 8.1:+58290925 MS.gene068945:CDS
GATCATAAGTCCGTAGTCTA+GGG 0.488727 8.1:-58290595 None:intergenic
GAGGAACATATGAATAGTGT+TGG 0.489290 8.1:+58290671 MS.gene068945:CDS
GAGGCGCGTGAGGTTGGTGA+GGG 0.495533 8.1:+58290854 MS.gene068945:CDS
AACCTTGGCTGTGCATTACA+CGG 0.498144 8.1:+58294169 MS.gene068945:CDS
TGGCATGGTTTAGGGTGGGT+TGG 0.501466 8.1:+58290929 MS.gene068945:CDS
TTACACAACAAGCGCGTGAA+AGG 0.502844 8.1:+58291793 MS.gene068945:CDS
ATGGCATGTGCCTTTGGCAG+TGG 0.511362 8.1:+58294125 MS.gene068945:CDS
TAGTGGATGGTGCAAATGTT+GGG 0.511839 8.1:+58291514 MS.gene068945:CDS
ATCGACGGCGAAGGTTATTG+AGG 0.516842 8.1:+58290814 MS.gene068945:CDS
CGGCGAAGGTTATTGAGGAA+TGG 0.518776 8.1:+58290819 MS.gene068945:CDS
TGAGGTGGTGTTGGTTGACA+CGG 0.519520 8.1:-58290358 None:intergenic
GTGGGCAGTGGCTGTAAAGA+TGG 0.520499 8.1:+58294425 MS.gene068945:intron
TGATGTTTAGGGAGGACATG+TGG 0.521545 8.1:-58290466 None:intergenic
TTGTGAAAGAATTGTACAAT+CGG 0.522991 8.1:+58291743 MS.gene068945:CDS
AGCAGCGAGGCGCGTGAGGT+TGG 0.525949 8.1:+58290848 MS.gene068945:CDS
GGCGCGTGAGGTTGGTGAGG+GGG 0.529963 8.1:+58290856 MS.gene068945:CDS
AAAGAAGGGTAGGGCTGATA+GGG 0.529986 8.1:+58290742 MS.gene068945:CDS
AGGTTAGTGCAAAGAAGGGT+AGG 0.530633 8.1:+58290732 MS.gene068945:CDS
ACATGTATCTCCACAAGCTA+AGG 0.533227 8.1:+58290768 MS.gene068945:CDS
TGGTGAGCAATTGGTTTGTG+TGG 0.535018 8.1:+58291012 MS.gene068945:CDS
CCAGTGGAAAGAAAGACATC+AGG 0.539374 8.1:+58293232 MS.gene068945:CDS
TGGGGTTAGTTTGGAAGAAG+CGG 0.539828 8.1:+58290691 MS.gene068945:CDS
TCTATGCTACTGTAAAACTT+AGG 0.542659 8.1:+58293141 MS.gene068945:CDS
AGGCGAGTTGTTTAAGGGAA+GGG 0.543359 8.1:-58290418 None:intergenic
TACACAACAAGCGCGTGAAA+GGG 0.543491 8.1:+58291794 MS.gene068945:CDS
AGAATGAGTGTTGATGATGA+TGG 0.544286 8.1:+58290974 MS.gene068945:CDS
GATCACATATTTGAACTCCT+AGG 0.545131 8.1:+58293194 MS.gene068945:CDS
GGATATTGATGATGAGGAGA+TGG 0.547903 8.1:+58291033 MS.gene068945:CDS
CAAGCGCGTGAAAGGGCTGA+TGG 0.549671 8.1:+58291801 MS.gene068945:CDS
GTAGTGCGTTGAGGTGGTGT+TGG 0.549866 8.1:-58290367 None:intergenic
TCAGAGCAGCGAGGCGCGTG+AGG 0.550323 8.1:+58290844 MS.gene068945:CDS
AAATGACAACAACCAAGAAG+AGG 0.551551 8.1:+58290222 None:intergenic
GAGCTCAATCGACACTAGAC+AGG 0.552389 8.1:-58294470 None:intergenic
TCACAGAAGCAGAACAATGC+GGG 0.554219 8.1:-58290617 None:intergenic
GATGCCACCACCATATTCGT+TGG 0.556941 8.1:+58293708 MS.gene068945:CDS
TTCCAGCCGAAAACTGGTAG+AGG 0.561895 8.1:+58291831 MS.gene068945:CDS
GGAAGGGTCTGTGACGGCGT+TGG 0.562345 8.1:-58290402 None:intergenic
TGTAGAGGAATCGACGGCGA+AGG 0.562747 8.1:+58290805 MS.gene068945:CDS
AAGGCGAGTTGTTTAAGGGA+AGG 0.566338 8.1:-58290419 None:intergenic
TGACTTCGAAATCTAAGCTA+AGG 0.567640 8.1:-58294290 None:intergenic
AATAACAGTACTTCCATGAC+TGG 0.569359 8.1:+58294318 MS.gene068945:CDS
CTCGCTGCAGCTAATGGCGA+TGG 0.570847 8.1:+58290524 MS.gene068945:CDS
TTGCTAGTGTCCACTGCCAA+AGG 0.571394 8.1:-58294135 None:intergenic
TCACACCACTCCTTAGCTTG+TGG 0.572469 8.1:-58290778 None:intergenic
CAATTCATGTTCCAAATCAA+AGG 0.573113 8.1:+58290286 MS.gene068945:CDS
GCCCGTGTAATGCACAGCCA+AGG 0.584577 8.1:-58294171 None:intergenic
GAGGTGGTGTTGGTTGACAC+GGG 0.585421 8.1:-58290357 None:intergenic
TAGGGATGGCTTGAGAAACA+TGG 0.585876 8.1:+58291477 MS.gene068945:intron
ACCTTGGCTGTGCATTACAC+GGG 0.587377 8.1:+58294170 MS.gene068945:CDS
ATAGTGGATGGTGCAAATGT+TGG 0.587427 8.1:+58291513 MS.gene068945:CDS
TTGTGTGGATATTGATGATG+AGG 0.587596 8.1:+58291027 MS.gene068945:CDS
ACAATGTTGCCCCTAGACTA+CGG 0.588939 8.1:+58290585 MS.gene068945:CDS
TGATAAAGCCTATGAAGTTG+AGG 0.589575 8.1:+58290652 MS.gene068945:CDS
CTGTGACGGCGTTGGAACAG+AGG 0.591299 8.1:-58290394 None:intergenic
AAGAATTGTACAATCGGAGT+GGG 0.595705 8.1:+58291749 MS.gene068945:CDS
TTGAAGGTTAGTGCAAAGAA+GGG 0.596452 8.1:+58290728 MS.gene068945:CDS
AGGCGCGTGAGGTTGGTGAG+GGG 0.597635 8.1:+58290855 MS.gene068945:CDS
GGATGTGACGAGGGTTAGGG+AGG 0.598009 8.1:+58290883 MS.gene068945:CDS
TCTCGCGACAGTGGCAACAG+TGG 0.599300 8.1:-58290501 None:intergenic
AATCGACACTAGACAGGTAA+CGG 0.600123 8.1:-58294464 None:intergenic
GAATGAGTGTTGATGATGAT+GGG 0.601914 8.1:+58290975 MS.gene068945:CDS
GGTAGAGTAGTGCGTTGAGG+TGG 0.602530 8.1:-58290373 None:intergenic
GCCGAAAACTGGTAGAGGAG+TGG 0.605019 8.1:+58291836 MS.gene068945:CDS
GGTTAGTGCAAAGAAGGGTA+GGG 0.605974 8.1:+58290733 MS.gene068945:CDS
TTTAAGGGAAGGGTCTGTGA+CGG 0.612255 8.1:-58290408 None:intergenic
TGCAGCGAGTCTCGCGACAG+TGG 0.612255 8.1:-58290510 None:intergenic
TGGCTGTTATGAAGCCATAG+TGG 0.613142 8.1:+58291497 MS.gene068945:CDS
TACTACTGTTTCTAATGGTG+TGG 0.614470 8.1:+58294209 MS.gene068945:CDS
GAGTGGTGTGAGGTGTGTAG+AGG 0.615182 8.1:+58290790 MS.gene068945:CDS
GGCAACAGTGGCTTCGTTAG+GGG 0.616842 8.1:-58290489 None:intergenic
GCAACGAGTCTTCAAAACCT+TGG 0.618012 8.1:+58294154 MS.gene068945:CDS
GGAACATATGAATAGTGTTG+GGG 0.619234 8.1:+58290673 MS.gene068945:CDS
ATTACCAACGAATATGGTGG+TGG 0.623520 8.1:-58293712 None:intergenic
TGCATTGGCTGTGGAGCGTG+AGG 0.624197 8.1:+58291078 MS.gene068945:CDS
GTTAGGGGTGATGTTTAGGG+AGG 0.633717 8.1:-58290474 None:intergenic
AGAGGTAGAGTAGTGCGTTG+AGG 0.636049 8.1:-58290376 None:intergenic
AAAGAATTGTACAATCGGAG+TGG 0.658729 8.1:+58291748 MS.gene068945:CDS
ACAAGCTAAGGAGTGGTGTG+AGG 0.664904 8.1:+58290780 MS.gene068945:CDS
TATCTCCACAAGCTAAGGAG+TGG 0.667172 8.1:+58290773 MS.gene068945:CDS
TTGTTGTGTAAGACAACCAG+CGG 0.667953 8.1:-58291781 None:intergenic
TGGATTACCAACGAATATGG+TGG 0.671696 8.1:-58293715 None:intergenic
GAATTGGAATTTGTTCTCTG+GGG 0.671991 8.1:-58290258 None:intergenic
TGTTATGAAGCCATAGTGGA+TGG 0.675972 8.1:+58291501 MS.gene068945:CDS
ATCATAAGTCCGTAGTCTAG+GGG 0.678016 8.1:-58290594 None:intergenic
GAGGTGTGTAGAGGAATCGA+CGG 0.687246 8.1:+58290799 MS.gene068945:CDS
CAAATAGAGAGACTGCGCCG+CGG 0.696921 8.1:-58290313 None:intergenic
TCCAAATCAAAGGACTTCCG+CGG 0.704937 8.1:+58290296 MS.gene068945:CDS
TTCACAGAAGCAGAACAATG+CGG 0.708877 8.1:-58290618 None:intergenic
GGAATGGTTTCAGAGCAGCG+AGG 0.773940 8.1:+58290835 MS.gene068945:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTTAATGCCTTAATATT+TGG + chr8.1:58292008-58292027 MS.gene068945:intron 15.0%
!!! TACAATTTGAATTTATTTTG+CGG - chr8.1:58291146-58291165 None:intergenic 15.0%
!!! TTTTTAAAGATAAACAATCT+TGG - chr8.1:58291169-58291188 None:intergenic 15.0%
!! AAAATCAAGATATCAGAAAT+TGG - chr8.1:58292435-58292454 None:intergenic 20.0%
!! AAATAGTGTTAACATTTCTT+TGG - chr8.1:58291294-58291313 None:intergenic 20.0%
!! AAATTGAATAATGTAAACAG+AGG - chr8.1:58293055-58293074 None:intergenic 20.0%
!! ATAATTTCAATTGACAGTAA+AGG - chr8.1:58291629-58291648 None:intergenic 20.0%
!! GTCTATTTAGAAATTCAATT+AGG + chr8.1:58293918-58293937 MS.gene068945:intron 20.0%
!! TCTGAAAACTTAAATTATCA+AGG - chr8.1:58293340-58293359 None:intergenic 20.0%
!! TTCGAATTGGTAAAAAATAT+TGG + chr8.1:58290557-58290576 MS.gene068945:CDS 20.0%
!!! AAAAAATGAGTTCTGAATTT+AGG - chr8.1:58294013-58294032 None:intergenic 20.0%
!!! AATAATGTTTTCCTAAGATA+AGG - chr8.1:58291949-58291968 None:intergenic 20.0%
!!! AATTATATTCGGTTTTAGAT+AGG + chr8.1:58292083-58292102 MS.gene068945:intron 20.0%
!!! ATGCACTTAATTTATCTTTT+GGG + chr8.1:58293104-58293123 MS.gene068945:intron 20.0%
!!! TATGCACTTAATTTATCTTT+TGG + chr8.1:58293103-58293122 MS.gene068945:intron 20.0%
!!! TTCTTTTGAAATTGGTTATT+GGG + chr8.1:58293423-58293442 MS.gene068945:intron 20.0%
! AAACATGTTACCAAAAATAC+AGG - chr8.1:58293633-58293652 None:intergenic 25.0%
! AAATCCAAATGAAACATAGA+AGG - chr8.1:58293083-58293102 None:intergenic 25.0%
! AAATGTTGACCAATGTAAAA+AGG - chr8.1:58292999-58293018 None:intergenic 25.0%
! ACAGTAAAGGAATAAGAAAA+AGG - chr8.1:58291616-58291635 None:intergenic 25.0%
! AGAGAAAGAAAAATATCAAG+TGG + chr8.1:58292270-58292289 MS.gene068945:intron 25.0%
! CAATAACCAATTTCAAAAGA+AGG - chr8.1:58293424-58293443 None:intergenic 25.0%
! GATAATATGGATAATGTTCA+TGG + chr8.1:58292358-58292377 MS.gene068945:intron 25.0%
! GGAAATTCTGTTATAAGTTA+AGG + chr8.1:58292234-58292253 MS.gene068945:intron 25.0%
! GTTGCGATGTAAATTATATT+CGG + chr8.1:58292072-58292091 MS.gene068945:intron 25.0%
! TGAATTTCTACAAATCGAAA+TGG + chr8.1:58293807-58293826 MS.gene068945:intron 25.0%
! TTAATATTTGGACTTCACTT+CGG + chr8.1:58292020-58292039 MS.gene068945:intron 25.0%
! TTGTGAAAGAATTGTACAAT+CGG + chr8.1:58291743-58291762 MS.gene068945:CDS 25.0%
! TTTGATTATGTCCTTATCTT+AGG + chr8.1:58291935-58291954 MS.gene068945:intron 25.0%
!! AAAGCACTAAACAAATATCA+TGG - chr8.1:58293759-58293778 None:intergenic 25.0%
!!! AAGTGTATAGTTTTTAGGAT+TGG - chr8.1:58292669-58292688 None:intergenic 25.0%
!!! CTTCTTTTGAAATTGGTTAT+TGG + chr8.1:58293422-58293441 MS.gene068945:intron 25.0%
!!! TAATTTATCTTTTGGGTTTC+AGG + chr8.1:58293111-58293130 MS.gene068945:intron 25.0%
!!! TGTTTGTTTTCTTTATCTAC+AGG + chr8.1:58293648-58293667 MS.gene068945:intron 25.0%
AAGTTGTAATACAGCAGATA+GGG - chr8.1:58293377-58293396 None:intergenic 30.0%
AATGGAAAGAATTATCAGGA+AGG - chr8.1:58294366-58294385 None:intergenic 30.0%
ACAGGAAAATGAATTGTGTA+AGG + chr8.1:58292212-58292231 MS.gene068945:intron 30.0%
AGGAACATATGAATAGTGTT+GGG + chr8.1:58290672-58290691 MS.gene068945:CDS 30.0%
ATCACCTTCTATGTTTCATT+TGG + chr8.1:58293076-58293095 MS.gene068945:intron 30.0%
ATCAGACTTTGTATGATACA+TGG - chr8.1:58293583-58293602 None:intergenic 30.0%
ATCGAATGATGATTGGTAAA+TGG + chr8.1:58291894-58291913 MS.gene068945:intron 30.0%
ATGCAGATTCCATAATGTAT+TGG + chr8.1:58291197-58291216 MS.gene068945:intron 30.0%
ATTTCAAAAGAAGGTAGATG+AGG - chr8.1:58293415-58293434 None:intergenic 30.0%
CAATTCATGTTCCAAATCAA+AGG + chr8.1:58290286-58290305 MS.gene068945:CDS 30.0%
CAGGAAAATGAATTGTGTAA+GGG + chr8.1:58292213-58292232 MS.gene068945:intron 30.0%
GAAGTGAAGTCCAAATATTA+AGG - chr8.1:58292021-58292040 None:intergenic 30.0%
GATCTTGACATAATAGCATA+AGG - chr8.1:58292492-58292511 None:intergenic 30.0%
GTATCATACAAAGTCTGATT+TGG + chr8.1:58293584-58293603 MS.gene068945:intron 30.0%
TATGCGAAAACCATAATCTA+AGG - chr8.1:58290441-58290460 None:intergenic 30.0%
TCTATGCTACTGTAAAACTT+AGG + chr8.1:58293141-58293160 MS.gene068945:CDS 30.0%
TTCAGATCGTGCTAATTATT+TGG + chr8.1:58292896-58292915 MS.gene068945:intron 30.0%
TTCCTGATAATTCTTTCCAT+TGG + chr8.1:58294365-58294384 MS.gene068945:intron 30.0%
! CTAATGCCATCTTAGAATTT+TGG - chr8.1:58292607-58292626 None:intergenic 30.0%
! CTGATATCTTGATTTTGTCA+TGG + chr8.1:58292439-58292458 MS.gene068945:intron 30.0%
! GAATTTAGGACTTTCATGTT+TGG - chr8.1:58293999-58294018 None:intergenic 30.0%
! GTTCACTACACTTTTGTTAA+GGG + chr8.1:58293670-58293689 MS.gene068945:CDS 30.0%
! TACGCTATTCCTTTTTACAT+TGG + chr8.1:58292987-58293006 MS.gene068945:intron 30.0%
! TATCAGCAAAATTTTGCTGA+CGG + chr8.1:58291540-58291559 MS.gene068945:CDS 30.0%
! TTACATTGTGCCTGTATTTT+TGG + chr8.1:58293620-58293639 MS.gene068945:intron 30.0%
! TTCACTACACTTTTGTTAAG+GGG + chr8.1:58293671-58293690 MS.gene068945:CDS 30.0%
! TTTTTACCAATTCGAATGCA+CGG - chr8.1:58290553-58290572 None:intergenic 30.0%
!! ACTTTGAAGTTCAACTTTGA+AGG - chr8.1:58293556-58293575 None:intergenic 30.0%
!! TGGAATCATTGAGTTTGTTA+GGG + chr8.1:58292290-58292309 MS.gene068945:intron 30.0%
!! TTCAATTTTGACAGCTTTCA+GGG + chr8.1:58294396-58294415 MS.gene068945:intron 30.0%
!! TTTCAATTTTGACAGCTTTC+AGG + chr8.1:58294395-58294414 MS.gene068945:intron 30.0%
!!! ACTTCATCTGCTATTTTTTG+TGG - chr8.1:58294270-58294289 None:intergenic 30.0%
!!! CATCTACCTTCTTTTGAAAT+TGG + chr8.1:58293415-58293434 MS.gene068945:intron 30.0%
!!! GTGTCAACTTTTTTACAGAA+TGG + chr8.1:58291357-58291376 MS.gene068945:intron 30.0%
AAACAACTCGCCTTAGATTA+TGG + chr8.1:58290428-58290447 MS.gene068945:CDS 35.0%
AAACGACTCGAATTGGTAAA+GGG + chr8.1:58293896-58293915 MS.gene068945:intron 35.0%
AAAGAATTGTACAATCGGAG+TGG + chr8.1:58291748-58291767 MS.gene068945:CDS 35.0%
AAATTGAAAGATCGTGCCAA+TGG - chr8.1:58294384-58294403 None:intergenic 35.0%
AACATGAATTGAGCTCGAAT+TGG - chr8.1:58290277-58290296 None:intergenic 35.0%
AACTAGTGGTATGACAGAAA+TGG + chr8.1:58292736-58292755 MS.gene068945:intron 35.0%
AAGAATTGTACAATCGGAGT+GGG + chr8.1:58291749-58291768 MS.gene068945:CDS 35.0%
AATAACAGTACTTCCATGAC+TGG + chr8.1:58294318-58294337 MS.gene068945:CDS 35.0%
AATTCCAAATGCTACCTCAA+GGG - chr8.1:58292789-58292808 None:intergenic 35.0%
AATTCGAGTCGTTTCTTCAT+AGG - chr8.1:58293890-58293909 None:intergenic 35.0%
ACAGTTTCAGATTTAGTCCA+AGG - chr8.1:58294081-58294100 None:intergenic 35.0%
AGAAATATAGCGAGAGTAAG+AGG + chr8.1:58292183-58292202 MS.gene068945:intron 35.0%
AGAATTGTTTGAGCCTTACA+AGG - chr8.1:58292763-58292782 None:intergenic 35.0%
AGGTAATTGCTAGCAAACAA+GGG + chr8.1:58293938-58293957 MS.gene068945:intron 35.0%
AGTTGTAATACAGCAGATAG+GGG - chr8.1:58293376-58293395 None:intergenic 35.0%
ATAAGAAAAAGGACCCAGTA+AGG - chr8.1:58291605-58291624 None:intergenic 35.0%
ATTATGCAAGTTCTTGCTCT+TGG + chr8.1:58291644-58291663 MS.gene068945:intron 35.0%
CAAAGCGATGAATTAGTTAG+AGG - chr8.1:58292953-58292972 None:intergenic 35.0%
CAAATGGATCGAATGATGAT+TGG + chr8.1:58291887-58291906 MS.gene068945:CDS 35.0%
CAAGTTGTAATACAGCAGAT+AGG - chr8.1:58293378-58293397 None:intergenic 35.0%
CAATCATCATTCGATCCATT+TGG - chr8.1:58291889-58291908 None:intergenic 35.0%
CATATGTTCCTCAACTTCAT+AGG - chr8.1:58290663-58290682 None:intergenic 35.0%
CATTCTACTGTTCTTTCTGT+GGG + chr8.1:58293779-58293798 MS.gene068945:intron 35.0%
CTATCTGCTGTATTACAACT+TGG + chr8.1:58293376-58293395 MS.gene068945:intron 35.0%
GAATGCGTACCAATACATTA+TGG - chr8.1:58291209-58291228 None:intergenic 35.0%
GAGGAACATATGAATAGTGT+TGG + chr8.1:58290671-58290690 MS.gene068945:CDS 35.0%
GATCACATATTTGAACTCCT+AGG + chr8.1:58293194-58293213 MS.gene068945:CDS 35.0%
GGAACATATGAATAGTGTTG+GGG + chr8.1:58290673-58290692 MS.gene068945:CDS 35.0%
GGCACATACAAAATATTACC+TGG - chr8.1:58293738-58293757 None:intergenic 35.0%
GTCAGTACTATATCAGATGT+TGG + chr8.1:58292628-58292647 MS.gene068945:intron 35.0%
GTGCTATATACAACTCCAAA+TGG + chr8.1:58291871-58291890 MS.gene068945:CDS 35.0%
TAGGTAATTGCTAGCAAACA+AGG + chr8.1:58293937-58293956 MS.gene068945:intron 35.0%
TATAAGTTAAGGATGCTGAG+TGG + chr8.1:58292245-58292264 MS.gene068945:intron 35.0%
TATGAAGAAACGACTCGAAT+TGG + chr8.1:58293889-58293908 MS.gene068945:intron 35.0%
TCATTCTACTGTTCTTTCTG+TGG + chr8.1:58293778-58293797 MS.gene068945:intron 35.0%
TCTACAAATCGAAATGGATG+TGG + chr8.1:58293813-58293832 MS.gene068945:intron 35.0%
TGACTTCGAAATCTAAGCTA+AGG - chr8.1:58294293-58294312 None:intergenic 35.0%
TGATAAAGCCTATGAAGTTG+AGG + chr8.1:58290652-58290671 MS.gene068945:CDS 35.0%
TGCCAATGGAAAGAATTATC+AGG - chr8.1:58294370-58294389 None:intergenic 35.0%
TGGTTGCAAAATTATGCAAG+TGG - chr8.1:58292415-58292434 None:intergenic 35.0%
TTAGGACTTTCATGTTTGGT+AGG - chr8.1:58293995-58294014 None:intergenic 35.0%
TTGAAGGTTAGTGCAAAGAA+GGG + chr8.1:58290728-58290747 MS.gene068945:CDS 35.0%
TTGTCATGGACAATATCTAC+TGG + chr8.1:58292453-58292472 MS.gene068945:intron 35.0%
TTTCATGACATTGTTGTCTG+AGG + chr8.1:58293502-58293521 MS.gene068945:intron 35.0%
TTTGAAGGTTAGTGCAAAGA+AGG + chr8.1:58290727-58290746 MS.gene068945:CDS 35.0%
! AACTTTGAAGGCTCTATCAA+TGG - chr8.1:58293544-58293563 None:intergenic 35.0%
! AATCTAAGGCGAGTTGTTTA+AGG - chr8.1:58290427-58290446 None:intergenic 35.0%
! ACTTTGAAGGCTCTATCAAT+GGG - chr8.1:58293543-58293562 None:intergenic 35.0%
! ATCTAAGGCGAGTTGTTTAA+GGG - chr8.1:58290426-58290445 None:intergenic 35.0%
! CCTACTCCAAAATTCTAAGA+TGG + chr8.1:58292598-58292617 MS.gene068945:intron 35.0%
! CGAATTGGAATTTGTTCTCT+GGG - chr8.1:58290262-58290281 None:intergenic 35.0%
! CTATTTCTCAATTCAGTCCT+TGG + chr8.1:58294061-58294080 MS.gene068945:intron 35.0%
! CTCTTTTCTTTTACCAGTCA+TGG - chr8.1:58294334-58294353 None:intergenic 35.0%
! GAATTGGAATTTGTTCTCTG+GGG - chr8.1:58290261-58290280 None:intergenic 35.0%
! GGAAATTGTAGCACTTTTGA+AGG + chr8.1:58290712-58290731 MS.gene068945:CDS 35.0%
! GGTTCACTACACTTTTGTTA+AGG + chr8.1:58293669-58293688 MS.gene068945:intron 35.0%
! GTAGCATTTGGAATTGAGTT+AGG + chr8.1:58292794-58292813 MS.gene068945:intron 35.0%
! GTGGAATCATTGAGTTTGTT+AGG + chr8.1:58292289-58292308 MS.gene068945:intron 35.0%
! TAAATCTGAAACTGTGTTGC+AGG + chr8.1:58294086-58294105 MS.gene068945:intron 35.0%
! TCGAATTGGAATTTGTTCTC+TGG - chr8.1:58290263-58290282 None:intergenic 35.0%
! TGATGATTCTGTCCTCTTTT+TGG + chr8.1:58291447-58291466 MS.gene068945:intron 35.0%
!! AGAATGAGTGTTGATGATGA+TGG + chr8.1:58290974-58290993 MS.gene068945:CDS 35.0%
!! CTCGGAAGTGTATAGTTTTT+AGG - chr8.1:58292674-58292693 None:intergenic 35.0%
!! GAATGAGTGTTGATGATGAT+GGG + chr8.1:58290975-58290994 MS.gene068945:CDS 35.0%
!! GGAATCATTGAGTTTGTTAG+GGG + chr8.1:58292291-58292310 MS.gene068945:intron 35.0%
!! GGCGAATTTTAGTGAATTTC+AGG + chr8.1:58291105-58291124 MS.gene068945:CDS 35.0%
!! TTGTGTGGATATTGATGATG+AGG + chr8.1:58291027-58291046 MS.gene068945:CDS 35.0%
!!! ATCTTTTGGGTTTCAGGTAT+TGG + chr8.1:58293117-58293136 MS.gene068945:intron 35.0%
!!! CCATCTTAGAATTTTGGAGT+AGG - chr8.1:58292601-58292620 None:intergenic 35.0%
!!! GTTTTTAGGATTGGACATCT+AGG - chr8.1:58292660-58292679 None:intergenic 35.0%
!!! TTGATTGGTTTTCCTCTTCT+TGG - chr8.1:58290237-58290256 None:intergenic 35.0%
AAAATAAACCCCCCACACTA+TGG - chr8.1:58292160-58292179 None:intergenic 40.0%
AAATAAACCCCCCACACTAT+GGG - chr8.1:58292159-58292178 None:intergenic 40.0%
AACATTTGCACCATCCACTA+TGG - chr8.1:58291514-58291533 None:intergenic 40.0%
AATAGCATAAGGCACGAACA+TGG - chr8.1:58292481-58292500 None:intergenic 40.0%
AATCGACACTAGACAGGTAA+CGG - chr8.1:58294467-58294486 None:intergenic 40.0%
ACAAATCGAAATGGATGTGG+TGG + chr8.1:58293816-58293835 MS.gene068945:intron 40.0%
ACAATCGGAGTGGGAAAAAA+TGG + chr8.1:58291758-58291777 MS.gene068945:CDS 40.0%
ACAATCTTAGTCCCTTGTGT+TGG + chr8.1:58292558-58292577 MS.gene068945:intron 40.0%
ACATGTATCTCCACAAGCTA+AGG + chr8.1:58290768-58290787 MS.gene068945:CDS 40.0%
ACCCGGGTATGTTTGAAAAA+GGG - chr8.1:58291232-58291251 None:intergenic 40.0%
ACCTATGTTAGTGCCTTACT+GGG + chr8.1:58291589-58291608 MS.gene068945:intron 40.0%
ACCTGGATTACCAACGAATA+TGG - chr8.1:58293721-58293740 None:intergenic 40.0%
AGATAGGACCATTGTTGAGA+TGG + chr8.1:58292099-58292118 MS.gene068945:intron 40.0%
AGCTTATTCTAGCATCAGCA+AGG + chr8.1:58293279-58293298 MS.gene068945:intron 40.0%
AGGAATCGGAAAAAGGATCA+TGG + chr8.1:58294106-58294125 MS.gene068945:intron 40.0%
ATCATAAGTCCGTAGTCTAG+GGG - chr8.1:58290597-58290616 None:intergenic 40.0%
ATTACCAACGAATATGGTGG+TGG - chr8.1:58293715-58293734 None:intergenic 40.0%
ATTCCAAATGCTACCTCAAG+GGG - chr8.1:58292788-58292807 None:intergenic 40.0%
CAATTCCAAATGCTACCTCA+AGG - chr8.1:58292790-58292809 None:intergenic 40.0%
GAAACGACTCGAATTGGTAA+AGG + chr8.1:58293895-58293914 MS.gene068945:intron 40.0%
GATCATAAGTCCGTAGTCTA+GGG - chr8.1:58290598-58290617 None:intergenic 40.0%
GATGGCACTAAAATACTGCT+TGG + chr8.1:58292050-58292069 MS.gene068945:intron 40.0%
GGTTGAAAAAGTTGCTTCCT+AGG - chr8.1:58293214-58293233 None:intergenic 40.0%
GTAGAGGAGTGGATGAAAAA+CGG + chr8.1:58291847-58291866 MS.gene068945:CDS 40.0%
GTCATACCACTAGTTGACAT+GGG - chr8.1:58292731-58292750 None:intergenic 40.0%
TACCTATGTTAGTGCCTTAC+TGG + chr8.1:58291588-58291607 MS.gene068945:intron 40.0%
TGAAACTGTGTTGCAGGAAT+CGG + chr8.1:58294092-58294111 MS.gene068945:intron 40.0%
TGACAGAAATGGTCCTTGTA+AGG + chr8.1:58292747-58292766 MS.gene068945:intron 40.0%
TGATATCCCATGTCAACTAG+TGG + chr8.1:58292722-58292741 MS.gene068945:intron 40.0%
TGATATGAAGCAATGTCACC+CGG - chr8.1:58291249-58291268 None:intergenic 40.0%
TGGACTTCACTTCGGATTAA+GGG + chr8.1:58292028-58292047 MS.gene068945:intron 40.0%
TGGATTACCAACGAATATGG+TGG - chr8.1:58293718-58293737 None:intergenic 40.0%
TGTCATACCACTAGTTGACA+TGG - chr8.1:58292732-58292751 None:intergenic 40.0%
TTCACAGAAGCAGAACAATG+CGG - chr8.1:58290621-58290640 None:intergenic 40.0%
TTCGTTAGGGGTGATGTTTA+GGG - chr8.1:58290480-58290499 None:intergenic 40.0%
TTGGACTTCACTTCGGATTA+AGG + chr8.1:58292027-58292046 MS.gene068945:intron 40.0%
TTGTTGTGTAAGACAACCAG+CGG - chr8.1:58291784-58291803 None:intergenic 40.0%
! CTCTGAAGAAGGTTAGTTCT+GGG + chr8.1:58292335-58292354 MS.gene068945:intron 40.0%
! TAGTGGATGGTGCAAATGTT+GGG + chr8.1:58291514-58291533 MS.gene068945:CDS 40.0%
! TCTCTGAAGAAGGTTAGTTC+TGG + chr8.1:58292334-58292353 MS.gene068945:intron 40.0%
! TGTTATGAAGCCATAGTGGA+TGG + chr8.1:58291501-58291520 MS.gene068945:CDS 40.0%
!! ACCATATTCGTTGGTAATCC+AGG + chr8.1:58293717-58293736 MS.gene068945:CDS 40.0%
!! ATAGTGGATGGTGCAAATGT+TGG + chr8.1:58291513-58291532 MS.gene068945:CDS 40.0%
!! CCTCTTTTTGGCAACTACTA+GGG + chr8.1:58291459-58291478 MS.gene068945:intron 40.0%
!! GAATAGTGTTGGGGTTAGTT+TGG + chr8.1:58290682-58290701 MS.gene068945:CDS 40.0%
!! GATGATGATGGGATTTGTTG+TGG + chr8.1:58290986-58291005 MS.gene068945:CDS 40.0%
!! GGATATTGATGATGAGGAGA+TGG + chr8.1:58291033-58291052 MS.gene068945:CDS 40.0%
!! GGTTAGTTCTGGGGATAATA+TGG + chr8.1:58292345-58292364 MS.gene068945:intron 40.0%
!! TCCTCTTTTTGGCAACTACT+AGG + chr8.1:58291458-58291477 MS.gene068945:intron 40.0%
!! TCTGAAGAAGGTTAGTTCTG+GGG + chr8.1:58292336-58292355 MS.gene068945:intron 40.0%
!! TTTGTTCTCTGGGGTTTGAT+TGG - chr8.1:58290252-58290271 None:intergenic 40.0%
!! TTTTTGGCAACTACTAGGGA+TGG + chr8.1:58291463-58291482 MS.gene068945:intron 40.0%
!!! CATCTGCTATTTTTTGTGGC+TGG - chr8.1:58294266-58294285 None:intergenic 40.0%
!!! GAAGCAACTTTTTCAACCAG+TGG + chr8.1:58293216-58293235 MS.gene068945:CDS 40.0%
!!! TCCCCTTTTTCAAACATACC+CGG + chr8.1:58291227-58291246 MS.gene068945:intron 40.0%
AAAATAGTGCTCGTGAGGCA+TGG + chr8.1:58292535-58292554 MS.gene068945:intron 45.0%
AAAGAAGGGTAGGGCTGATA+GGG + chr8.1:58290742-58290761 MS.gene068945:CDS 45.0%
AAATCCTTCCAGCCGAAAAC+TGG + chr8.1:58291825-58291844 MS.gene068945:CDS 45.0%
AACCTTGGCTGTGCATTACA+CGG + chr8.1:58294169-58294188 MS.gene068945:CDS 45.0%
AAGGCGAGTTGTTTAAGGGA+AGG - chr8.1:58290422-58290441 None:intergenic 45.0%
AATAAACCCCCCACACTATG+GGG - chr8.1:58292158-58292177 None:intergenic 45.0%
ACAATGTTGCCCCTAGACTA+CGG + chr8.1:58290585-58290604 MS.gene068945:CDS 45.0%
AGGACCATTGTTGAGATGGT+GGG + chr8.1:58292103-58292122 MS.gene068945:intron 45.0%
AGGCGAGTTGTTTAAGGGAA+GGG - chr8.1:58290421-58290440 None:intergenic 45.0%
AGGTTAGTGCAAAGAAGGGT+AGG + chr8.1:58290732-58290751 MS.gene068945:CDS 45.0%
ATCTGTTGTCCCCATAGTGT+GGG + chr8.1:58292146-58292165 MS.gene068945:intron 45.0%
ATTTGGATGTGACGAGGGTT+AGG + chr8.1:58290879-58290898 MS.gene068945:CDS 45.0%
CAAACAATTCTCACCCCTTG+AGG + chr8.1:58292772-58292791 MS.gene068945:intron 45.0%
CAACATGCAGACACAATCAG+TGG - chr8.1:58291696-58291715 None:intergenic 45.0%
CACCCGGGTATGTTTGAAAA+AGG - chr8.1:58291233-58291252 None:intergenic 45.0%
CATGCAAAATAGTGCTCGTG+AGG + chr8.1:58292530-58292549 MS.gene068945:intron 45.0%
CCAGTGGAAAGAAAGACATC+AGG + chr8.1:58293232-58293251 MS.gene068945:CDS 45.0%
CCCGGGTATGTTTGAAAAAG+GGG - chr8.1:58291231-58291250 None:intergenic 45.0%
CCCTAGTAGTTGCCAAAAAG+AGG - chr8.1:58291462-58291481 None:intergenic 45.0%
CCTGATGTCTTTCTTTCCAC+TGG - chr8.1:58293235-58293254 None:intergenic 45.0%
CTTCACTTCGGATTAAGGGA+TGG + chr8.1:58292032-58292051 MS.gene068945:intron 45.0%
CTTCGTTAGGGGTGATGTTT+AGG - chr8.1:58290481-58290500 None:intergenic 45.0%
GAGAGTAAGAGGAGAGAAAC+AGG + chr8.1:58292194-58292213 MS.gene068945:intron 45.0%
GATATGAAGCAATGTCACCC+GGG - chr8.1:58291248-58291267 None:intergenic 45.0%
GCAACGAGTCTTCAAAACCT+TGG + chr8.1:58294154-58294173 MS.gene068945:CDS 45.0%
GGATCATAAGTCCGTAGTCT+AGG - chr8.1:58290599-58290618 None:intergenic 45.0%
GGTTAGTGCAAAGAAGGGTA+GGG + chr8.1:58290733-58290752 MS.gene068945:CDS 45.0%
GTGTTGCAGGAATCGGAAAA+AGG + chr8.1:58294099-58294118 MS.gene068945:intron 45.0%
TACACAACAAGCGCGTGAAA+GGG + chr8.1:58291794-58291813 MS.gene068945:CDS 45.0%
TAGGACCATTGTTGAGATGG+TGG + chr8.1:58292102-58292121 MS.gene068945:intron 45.0%
TAGGGATGGCTTGAGAAACA+TGG + chr8.1:58291477-58291496 MS.gene068945:intron 45.0%
TATCTCCACAAGCTAAGGAG+TGG + chr8.1:58290773-58290792 MS.gene068945:CDS 45.0%
TCAACCTCAAGCCAACACAA+GGG - chr8.1:58292572-58292591 None:intergenic 45.0%
TCACAGAAGCAGAACAATGC+GGG - chr8.1:58290620-58290639 None:intergenic 45.0%
TCCAAATCAAAGGACTTCCG+CGG + chr8.1:58290296-58290315 MS.gene068945:CDS 45.0%
TGATGTTTAGGGAGGACATG+TGG - chr8.1:58290469-58290488 None:intergenic 45.0%
TGCTTCATCTGTTGCTGCAT+TGG + chr8.1:58291063-58291082 MS.gene068945:CDS 45.0%
TGGCTGTTATGAAGCCATAG+TGG + chr8.1:58291497-58291516 MS.gene068945:CDS 45.0%
TTACACAACAAGCGCGTGAA+AGG + chr8.1:58291793-58291812 MS.gene068945:CDS 45.0%
TTGTGGATGTGGTGAGCAAT+TGG + chr8.1:58291003-58291022 MS.gene068945:CDS 45.0%
TTTAAGGGAAGGGTCTGTGA+CGG - chr8.1:58290411-58290430 None:intergenic 45.0%
TTTGGATGTGACGAGGGTTA+GGG + chr8.1:58290880-58290899 MS.gene068945:CDS 45.0%
! ACCCAGTAAGGCACTAACAT+AGG - chr8.1:58291593-58291612 None:intergenic 45.0%
! ATTTTCTCAGAGTCGTGAGC+AGG - chr8.1:58293313-58293332 None:intergenic 45.0%
! CAGCAAAATTTTGCTGACGG+TGG + chr8.1:58291543-58291562 MS.gene068945:CDS 45.0%
! CGGTGGATTTAGCACTAATC+AGG + chr8.1:58291560-58291579 MS.gene068945:CDS 45.0%
! TCCACTCCTCTACCAGTTTT+CGG - chr8.1:58291840-58291859 None:intergenic 45.0%
!! ACCTGTCTAGTGTCGATTGA+TGG + chr8.1:58294469-58294488 MS.gene068945:CDS 45.0%
!! GAGCATTGGTTCTCTGAAGA+AGG + chr8.1:58292324-58292343 MS.gene068945:intron 45.0%
!! GATGGGATTTGTTGTGGATG+TGG + chr8.1:58290992-58291011 MS.gene068945:CDS 45.0%
!! GTTTAGGGTGGGTTGGAAAA+GGG + chr8.1:58290936-58290955 MS.gene068945:CDS 45.0%
!! TGGGGTTAGTTTGGAAGAAG+CGG + chr8.1:58290691-58290710 MS.gene068945:CDS 45.0%
!! TGGTGAGCAATTGGTTTGTG+TGG + chr8.1:58291012-58291031 MS.gene068945:CDS 45.0%
!! TTTAGGGTGGGTTGGAAAAG+GGG + chr8.1:58290937-58290956 MS.gene068945:CDS 45.0%
!!! CCCCTTTTTCAAACATACCC+GGG + chr8.1:58291228-58291247 MS.gene068945:intron 45.0%
!! AAATTAATAGAAATTATTTA+TGG - chr8.1:58293485-58293504 None:intergenic 5.0%
ACAAGCTAAGGAGTGGTGTG+AGG + chr8.1:58290780-58290799 MS.gene068945:CDS 50.0%
ACCTTGGCTGTGCATTACAC+GGG + chr8.1:58294170-58294189 MS.gene068945:CDS 50.0%
ACTTCCGAGCTCCAGTCTTT+GGG + chr8.1:58292685-58292704 MS.gene068945:intron 50.0%
AGAGGTAGAGTAGTGCGTTG+AGG - chr8.1:58290379-58290398 None:intergenic 50.0%
AGGATCATGGCATGTGCCTT+TGG + chr8.1:58294119-58294138 MS.gene068945:CDS 50.0%
ATCGACGGCGAAGGTTATTG+AGG + chr8.1:58290814-58290833 MS.gene068945:CDS 50.0%
CAAAGAAGGGTAGGGCTGAT+AGG + chr8.1:58290741-58290760 MS.gene068945:CDS 50.0%
CATCTGTTGTCCCCATAGTG+TGG + chr8.1:58292145-58292164 MS.gene068945:intron 50.0%
CGGCGAAGGTTATTGAGGAA+TGG + chr8.1:58290819-58290838 MS.gene068945:CDS 50.0%
CTCAACCTCAAGCCAACACA+AGG - chr8.1:58292573-58292592 None:intergenic 50.0%
GAGGTGTGTAGAGGAATCGA+CGG + chr8.1:58290799-58290818 MS.gene068945:CDS 50.0%
GATGCCACCACCATATTCGT+TGG + chr8.1:58293708-58293727 MS.gene068945:CDS 50.0%
GTTAGGGGTGATGTTTAGGG+AGG - chr8.1:58290477-58290496 None:intergenic 50.0%
TCACCCCTTGAGGTAGCATT+TGG + chr8.1:58292782-58292801 MS.gene068945:intron 50.0%
TCTGTTGTCCCCATAGTGTG+GGG + chr8.1:58292147-58292166 MS.gene068945:intron 50.0%
TGAGCCCACCATCTCAACAA+TGG - chr8.1:58292110-58292129 None:intergenic 50.0%
TGGCAACAGTGGCTTCGTTA+GGG - chr8.1:58290493-58290512 None:intergenic 50.0%
TGGTGACCGTGCATTCGAAT+TGG + chr8.1:58290544-58290563 MS.gene068945:CDS 50.0%
TTCCAGCCGAAAACTGGTAG+AGG + chr8.1:58291831-58291850 MS.gene068945:CDS 50.0%
TTGACAGCTTTCAGGGTTGC+TGG + chr8.1:58294403-58294422 MS.gene068945:intron 50.0%
TTGCTAGTGTCCACTGCCAA+AGG - chr8.1:58294138-58294157 None:intergenic 50.0%
TTGTCCCAAAGACTGGAGCT+CGG - chr8.1:58292692-58292711 None:intergenic 50.0%
! TCACACCACTCCTTAGCTTG+TGG - chr8.1:58290781-58290800 None:intergenic 50.0%
! TCTACCAGTTTTCGGCTGGA+AGG - chr8.1:58291832-58291851 None:intergenic 50.0%
!! ATCTGTTGCTGCATTGGCTG+TGG + chr8.1:58291069-58291088 MS.gene068945:CDS 50.0%
!! CTCCAGTCTTTGGGACAAGA+GGG + chr8.1:58292694-58292713 MS.gene068945:intron 50.0%
!! GGTTTAGGGTGGGTTGGAAA+AGG + chr8.1:58290935-58290954 MS.gene068945:CDS 50.0%
!! GTGGGTTGGAAAAGGGGATT+GGG + chr8.1:58290943-58290962 MS.gene068945:CDS 50.0%
!! GTTGAGATGGTGGGCTCAAA+GGG + chr8.1:58292112-58292131 MS.gene068945:intron 50.0%
!! TAGTCCCTTGTGTTGGCTTG+AGG + chr8.1:58292565-58292584 MS.gene068945:intron 50.0%
!! TGAGGTGGTGTTGGTTGACA+CGG - chr8.1:58290361-58290380 None:intergenic 50.0%
!! TGTTGAGATGGTGGGCTCAA+AGG + chr8.1:58292111-58292130 MS.gene068945:intron 50.0%
!! TTTTGAGGAATGGAGGAGGG+TGG + chr8.1:58290909-58290928 MS.gene068945:CDS 50.0%
!!! CGGTTTTGAGGAATGGAGGA+GGG + chr8.1:58290906-58290925 MS.gene068945:CDS 50.0%
ACAGCTTTCAGGGTTGCTGG+TGG + chr8.1:58294406-58294425 MS.gene068945:intron 55.0%
AGGGGGATTTGGATGTGACG+AGG + chr8.1:58290873-58290892 MS.gene068945:CDS 55.0%
ATGGCATGTGCCTTTGGCAG+TGG + chr8.1:58294125-58294144 MS.gene068945:CDS 55.0%
CAAATAGAGAGACTGCGCCG+CGG - chr8.1:58290316-58290335 None:intergenic 55.0%
CACCCTCTTGTCCCAAAGAC+TGG - chr8.1:58292699-58292718 None:intergenic 55.0%
CACTTCCGAGCTCCAGTCTT+TGG + chr8.1:58292684-58292703 MS.gene068945:intron 55.0%
CAGCTTTCAGGGTTGCTGGT+GGG + chr8.1:58294407-58294426 MS.gene068945:intron 55.0%
CTGTTGTCCCCATAGTGTGG+GGG + chr8.1:58292148-58292167 MS.gene068945:intron 55.0%
GAGGAGGGTGGCATGGTTTA+GGG + chr8.1:58290921-58290940 MS.gene068945:CDS 55.0%
GAGTGGGAAAAAATGGCCGC+TGG + chr8.1:58291765-58291784 MS.gene068945:CDS 55.0%
GAGTGGTGTGAGGTGTGTAG+AGG + chr8.1:58290790-58290809 MS.gene068945:CDS 55.0%
GCCGAAAACTGGTAGAGGAG+TGG + chr8.1:58291836-58291855 MS.gene068945:CDS 55.0%
GCCGCGGAAGTCCTTTGATT+TGG - chr8.1:58290300-58290319 None:intergenic 55.0%
GGAATGGTTTCAGAGCAGCG+AGG + chr8.1:58290835-58290854 MS.gene068945:CDS 55.0%
GGCAACAGTGGCTTCGTTAG+GGG - chr8.1:58290492-58290511 None:intergenic 55.0%
GGGGGATTTGGATGTGACGA+GGG + chr8.1:58290874-58290893 MS.gene068945:CDS 55.0%
GGTAGAGTAGTGCGTTGAGG+TGG - chr8.1:58290376-58290395 None:intergenic 55.0%
GTAGTGCGTTGAGGTGGTGT+TGG - chr8.1:58290370-58290389 None:intergenic 55.0%
GTGGCAACAGTGGCTTCGTT+AGG - chr8.1:58290494-58290513 None:intergenic 55.0%
GTGGGCAGTGGCTGTAAAGA+TGG + chr8.1:58294425-58294444 MS.gene068945:intron 55.0%
TGTAGAGGAATCGACGGCGA+AGG + chr8.1:58290805-58290824 MS.gene068945:CDS 55.0%
TGTTGTCCCCATAGTGTGGG+GGG + chr8.1:58292149-58292168 MS.gene068945:intron 55.0%
! AGGGTGGCATGGTTTAGGGT+GGG + chr8.1:58290925-58290944 MS.gene068945:CDS 55.0%
! CTCCTCTACCAGTTTTCGGC+TGG - chr8.1:58291836-58291855 None:intergenic 55.0%
! TGGCATGGTTTAGGGTGGGT+TGG + chr8.1:58290929-58290948 MS.gene068945:CDS 55.0%
!! GAGGTGGTGTTGGTTGACAC+GGG - chr8.1:58290360-58290379 None:intergenic 55.0%
!! GCTCCAGTCTTTGGGACAAG+AGG + chr8.1:58292693-58292712 MS.gene068945:intron 55.0%
!! GGTGGGTTGGAAAAGGGGAT+TGG + chr8.1:58290942-58290961 MS.gene068945:CDS 55.0%
!! TGAGGTTGGTGAGGGGGATT+TGG + chr8.1:58290862-58290881 MS.gene068945:CDS 55.0%
!!! AGGGAGGCGGTTTTGAGGAA+TGG + chr8.1:58290899-58290918 MS.gene068945:CDS 55.0%
!!! GAGGCGGTTTTGAGGAATGG+AGG + chr8.1:58290902-58290921 MS.gene068945:CDS 55.0%
!!! GCGGTTTTGAGGAATGGAGG+AGG + chr8.1:58290905-58290924 MS.gene068945:CDS 55.0%
AGGAATGGAGGAGGGTGGCA+TGG + chr8.1:58290914-58290933 MS.gene068945:CDS 60.0%
CAAGCGCGTGAAAGGGCTGA+TGG + chr8.1:58291801-58291820 MS.gene068945:CDS 60.0%
CTCGCTGCAGCTAATGGCGA+TGG + chr8.1:58290524-58290543 MS.gene068945:CDS 60.0%
GAGGGTGGCATGGTTTAGGG+TGG + chr8.1:58290924-58290943 MS.gene068945:CDS 60.0%
GCCCGTGTAATGCACAGCCA+AGG - chr8.1:58294174-58294193 None:intergenic 60.0%
GCGAGACTCGCTGCAGCTAA+TGG + chr8.1:58290518-58290537 MS.gene068945:CDS 60.0%
GGAGGAGGGTGGCATGGTTT+AGG + chr8.1:58290920-58290939 MS.gene068945:CDS 60.0%
GGATGTGACGAGGGTTAGGG+AGG + chr8.1:58290883-58290902 MS.gene068945:CDS 60.0%
TCTCGCGACAGTGGCAACAG+TGG - chr8.1:58290504-58290523 None:intergenic 60.0%
TGTGACGAGGGTTAGGGAGG+CGG + chr8.1:58290886-58290905 MS.gene068945:CDS 60.0%
! CTGTGACGGCGTTGGAACAG+AGG - chr8.1:58290397-58290416 None:intergenic 60.0%
! GGGGCAGAGACAGAGAGCAT+TGG + chr8.1:58292310-58292329 MS.gene068945:intron 60.0%
! GGGTTAGGGAGGCGGTTTTG+AGG + chr8.1:58290894-58290913 MS.gene068945:CDS 60.0%
!! TGCATTGGCTGTGGAGCGTG+AGG + chr8.1:58291078-58291097 MS.gene068945:CDS 60.0%
GGAAGGGTCTGTGACGGCGT+TGG - chr8.1:58290405-58290424 None:intergenic 65.0%
GGCTGTGGAGCGTGAGGTCA+AGG + chr8.1:58291084-58291103 MS.gene068945:CDS 65.0%
TGCAGCGAGTCTCGCGACAG+TGG - chr8.1:58290513-58290532 None:intergenic 65.0%
! TCAGGGTTGCTGGTGGGCAG+TGG + chr8.1:58294413-58294432 MS.gene068945:intron 65.0%
!! AGGCGCGTGAGGTTGGTGAG+GGG + chr8.1:58290855-58290874 MS.gene068945:CDS 65.0%
!! GAGGCGCGTGAGGTTGGTGA+GGG + chr8.1:58290854-58290873 MS.gene068945:CDS 65.0%
AGCAGCGAGGCGCGTGAGGT+TGG + chr8.1:58290848-58290867 MS.gene068945:CDS 70.0%
TCAGAGCAGCGAGGCGCGTG+AGG + chr8.1:58290844-58290863 MS.gene068945:CDS 70.0%
!! CGAGGCGCGTGAGGTTGGTG+AGG + chr8.1:58290853-58290872 MS.gene068945:CDS 70.0%
!! GGCGCGTGAGGTTGGTGAGG+GGG + chr8.1:58290856-58290875 MS.gene068945:CDS 70.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 58290224 58294488 58290224 ID=MS.gene068945
chr8.1 mRNA 58290224 58294488 58290224 ID=MS.gene068945.t1;Parent=MS.gene068945
chr8.1 exon 58290224 58291126 58290224 ID=MS.gene068945.t1.exon1;Parent=MS.gene068945.t1
chr8.1 CDS 58290224 58291126 58290224 ID=cds.MS.gene068945.t1;Parent=MS.gene068945.t1
chr8.1 exon 58291480 58291581 58291480 ID=MS.gene068945.t1.exon2;Parent=MS.gene068945.t1
chr8.1 CDS 58291480 58291581 58291480 ID=cds.MS.gene068945.t1;Parent=MS.gene068945.t1
chr8.1 exon 58291733 58291908 58291733 ID=MS.gene068945.t1.exon3;Parent=MS.gene068945.t1
chr8.1 CDS 58291733 58291908 58291733 ID=cds.MS.gene068945.t1;Parent=MS.gene068945.t1
chr8.1 exon 58293133 58293253 58293133 ID=MS.gene068945.t1.exon4;Parent=MS.gene068945.t1
chr8.1 CDS 58293133 58293253 58293133 ID=cds.MS.gene068945.t1;Parent=MS.gene068945.t1
chr8.1 exon 58293670 58293738 58293670 ID=MS.gene068945.t1.exon5;Parent=MS.gene068945.t1
chr8.1 CDS 58293670 58293738 58293670 ID=cds.MS.gene068945.t1;Parent=MS.gene068945.t1
chr8.1 exon 58294108 58294339 58294108 ID=MS.gene068945.t1.exon6;Parent=MS.gene068945.t1
chr8.1 CDS 58294108 58294339 58294108 ID=cds.MS.gene068945.t1;Parent=MS.gene068945.t1
chr8.1 exon 58294433 58294488 58294433 ID=MS.gene068945.t1.exon7;Parent=MS.gene068945.t1
chr8.1 CDS 58294433 58294488 58294433 ID=cds.MS.gene068945.t1;Parent=MS.gene068945.t1
Gene Sequence

>MS.gene068945

ATGACAACAACCAAGAAGAGGAAAACCAATCAAACCCCAGAGAACAAATTCCAATTCGAGCTCAATTCATGTTCCAAATCAAAGGACTTCCGCGGCGCAGTCTCTCTATTTGATGATGCTGTTTCAAACAACACCCGTGTCAACCAACACCACCTCAACGCACTACTCTACCTCTGTTCCAACGCCGTCACAGACCCTTCCCTTAAACAACTCGCCTTAGATTATGGTTTTCGCATATTCAACCACATGTCCTCCCTAAACATCACCCCTAACGAAGCCACTGTTGCCACTGTCGCGAGACTCGCTGCAGCTAATGGCGATGGTGACCGTGCATTCGAATTGGTAAAAAATATTGGTAATTACAATGTTGCCCCTAGACTACGGACTTATGATCCCGCATTGTTCTGCTTCTGTGAATTACTTGATGCTGATAAAGCCTATGAAGTTGAGGAACATATGAATAGTGTTGGGGTTAGTTTGGAAGAAGCGGAAATTGTAGCACTTTTGAAGGTTAGTGCAAAGAAGGGTAGGGCTGATAGGGTTTACATGTATCTCCACAAGCTAAGGAGTGGTGTGAGGTGTGTAGAGGAATCGACGGCGAAGGTTATTGAGGAATGGTTTCAGAGCAGCGAGGCGCGTGAGGTTGGTGAGGGGGATTTGGATGTGACGAGGGTTAGGGAGGCGGTTTTGAGGAATGGAGGAGGGTGGCATGGTTTAGGGTGGGTTGGAAAAGGGGATTGGGTTGTGTCTAGAATGAGTGTTGATGATGATGGGATTTGTTGTGGATGTGGTGAGCAATTGGTTTGTGTGGATATTGATGATGAGGAGATGGAGAAATTTGCTTCATCTGTTGCTGCATTGGCTGTGGAGCGTGAGGTCAAGGCGAATTTTAGTGAATTTCAGGTGAGTGAAATACTAGCCGCAAAATAAATTCAAATTGTACCAAGATTGTTTATCTTTAAAAACTAATAACATGCAGATTCCATAATGTATTGGTACGCATTCCCCTTTTTCAAACATACCCGGGTGACATTGCTTCATATCAATTAACATTGTTTTTCTTCTATCCAAAGAAATGTTAACACTATTTTTACTATGATCGTTTTGCAAAAATACATCAACTTTTAAAGAGTGTGTCAACTTTTTTACAGAATGGTGCAGTAATAGAGAGAGAGAGAGAGCATTGTTAACATTCTTTAAAAGTTATAATTGTAACTTTGTTTTGATGATTCTGTCCTCTTTTTGGCAACTACTAGGGATGGCTTGAGAAACATGGCTGTTATGAAGCCATAGTGGATGGTGCAAATGTTGGGCTCTATCAGCAAAATTTTGCTGACGGTGGATTTAGCACTAATCAGGTAATATACCTATGTTAGTGCCTTACTGGGTCCTTTTTCTTATTCCTTTACTGTCAATTGAAATTATGCAAGTTCTTGCTCTTGGTTGATTAGTAAACTTAACAGTTCATGCCACTGATTGTGTCTGCATGTTGATTATATAATAATGTAGCTTGATGATGTTGTGAAAGAATTGTACAATCGGAGTGGGAAAAAATGGCCGCTGGTTGTCTTACACAACAAGCGCGTGAAAGGGCTGATGGAAAATCCTTCCAGCCGAAAACTGGTAGAGGAGTGGATGAAAAACGGTGTGCTATATACAACTCCAAATGGATCGAATGATGATTGGTAAATGGCAAAATTTACTTTTAAGTTTTGATTATGTCCTTATCTTAGGAAAACATTATTGCTTCTTGAAATGTTTGAACATTTCTTTACTGTAATAGAAAATTTAATGCCTTAATATTTGGACTTCACTTCGGATTAAGGGATGGCACTAAAATACTGCTTGGTTGCGATGTAAATTATATTCGGTTTTAGATAGGACCATTGTTGAGATGGTGGGCTCAAAGGGACAGTTAGCACATCTGTTGTCCCCATAGTGTGGGGGGTTTATTTTAACAGAAATATAGCGAGAGTAAGAGGAGAGAAACAGGAAAATGAATTGTGTAAGGGAAATTCTGTTATAAGTTAAGGATGCTGAGTGGAGAGAGAAAGAAAAATATCAAGTGGAATCATTGAGTTTGTTAGGGGCAGAGACAGAGAGCATTGGTTCTCTGAAGAAGGTTAGTTCTGGGGATAATATGGATAATGTTCATGGATATTGTCTTGACAATCAGAAGTTTCACATTCCACTTGCATAATTTTGCAACCAATTTCTGATATCTTGATTTTGTCATGGACAATATCTACTGGTACCATGTTCGTGCCTTATGCTATTATGTCAAGATCTCACATTGATTAGAGATACATGCAAAATAGTGCTCGTGAGGCATGGACAATCTTAGTCCCTTGTGTTGGCTTGAGGTTGAGTTAGACCTACTCCAAAATTCTAAGATGGCATTAGAGTCAGTACTATATCAGATGTTGGACAAATCCTAGATGTCCAATCCTAAAAACTATACACTTCCGAGCTCCAGTCTTTGGGACAAGAGGGTGCGTTGATATCCCATGTCAACTAGTGGTATGACAGAAATGGTCCTTGTAAGGCTCAAACAATTCTCACCCCTTGAGGTAGCATTTGGAATTGAGTTAGGCATAGTCAAAAAGTCTAAGAAGTAGTTTTCTTAAATGTTGTAGTTTTTATTTTTAATTGTGCTATTAATATATTTTTATTTCAGATCGTGCTAATTATTTGGTCTAAATAATTTGTATGTATAGTTAAATTCACCTCTAACTAATTCATCGCTTTGATGCAATTTCATTATACGCTATTCCTTTTTACATTGGTCAACATTTTGTTTTGCATCTTTCAATCACTATTATGTAAAACCTCTGTTTACATTATTCAATTTTATCACCTTCTATGTTTCATTTGGATTTTATGCACTTAATTTATCTTTTGGGTTTCAGGTATTGGCTCTATGCTACTGTAAAACTTAGGTGTTTGCTTGTGACAAATGATGAAATGCGAGATCACATATTTGAACTCCTAGGAAGCAACTTTTTCAACCAGTGGAAAGAAAGACATCAGGTAATATATTTCTTATTTCTAAGATAGCTTATTCTAGCATCAGCAAGGAGTTGCTGCCTGCTCACGACTCTGAGAAAATTCTTCCTTGATAATTTAAGTTTTCAGATTTTTGTTTACGTCCCCTATCTGCTGTATTACAACTTGGTCTGAGCACTTTACCTCATCTACCTTCTTTTGAAATTGGTTATTGGGAGAAAATTTTTTGATCTGTTTTAAGTTGTAGAAACACCATAAATAATTTCTATTAATTTCATGACATTGTTGTCTGAGGTAGTGTCAATTGTTTCCCATTGATAGAGCCTTCAAAGTTGAACTTCAAAGTTGAACCATGTATCATACAAAGTCTGATTTGGCGATATAAGATTTTTACATTGTGCCTGTATTTTTGGTAACATGTTTGTTTTCTTTATCTACAGGTTCACTACACTTTTGTTAAGGGGAACTTGAAACTTCAGATGCCACCACCATATTCGTTGGTAATCCAGGTAATATTTTGTATGTGCCATGATATTTGTTTAGTGCTTTCATTCTACTGTTCTTTCTGTGGGTCTCATGAATTTCTACAAATCGAAATGGATGTGGTGGAAAAAGTGTGTTAAAGAATATATTTCTAGCATTTCTCTTTTAAGAATTCCTATGAAGAAACGACTCGAATTGGTAAAGGGTCTATTTAGAAATTCAATTAGGTAATTGCTAGCAAACAAGGGTTCTAGAGCATTAGCATTACTCTTAAGATGTCCTACCAAACATGAAAGTCCTAAATTCAGAACTCATTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAACTATTTCTCAATTCAGTCCTTGGACTAAATCTGAAACTGTGTTGCAGGAATCGGAAAAAGGATCATGGCATGTGCCTTTGGCAGTGGACACTAGCAACGAGTCTTCAAAACCTTGGCTGTGCATTACACGGGCAAGTGCTGATGATGCTACTACTGTTTCTAATGGTGTGGATACTTCTGGAAATAATCATATTCATATCGACCAGCCACAAAAAATAGCAGATGAAGTCCTTAGCTTAGATTTCGAAGTCATTGAGAATAACAGTACTTCCATGACTGGTAAAAGAAAAGAGAGATCTGATCCTTCCTGATAATTCTTTCCATTGGCACGATCTTTCAATTTTGACAGCTTTCAGGGTTGCTGGTGGGCAGTGGCTGTAAAGATGGTTCATGATGTGAACAGCCGTTACCTGTCTAGTGTCGATTGA

Protein sequence

>MS.gene068945.t1

MTTTKKRKTNQTPENKFQFELNSCSKSKDFRGAVSLFDDAVSNNTRVNQHHLNALLYLCSNAVTDPSLKQLALDYGFRIFNHMSSLNITPNEATVATVARLAAANGDGDRAFELVKNIGNYNVAPRLRTYDPALFCFCELLDADKAYEVEEHMNSVGVSLEEAEIVALLKVSAKKGRADRVYMYLHKLRSGVRCVEESTAKVIEEWFQSSEAREVGEGDLDVTRVREAVLRNGGGWHGLGWVGKGDWVVSRMSVDDDGICCGCGEQLVCVDIDDEEMEKFASSVAALAVEREVKANFSEFQGWLEKHGCYEAIVDGANVGLYQQNFADGGFSTNQLDDVVKELYNRSGKKWPLVVLHNKRVKGLMENPSSRKLVEEWMKNGVLYTTPNGSNDDWYWLYATVKLRCLLVTNDEMRDHIFELLGSNFFNQWKERHQVHYTFVKGNLKLQMPPPYSLVIQESEKGSWHVPLAVDTSNESSKPWLCITRASADDATTVSNGVDTSGNNHIHIDQPQKIADEVLSLDFEVIENNSTSMTVAVKMVHDVNSRYLSSVD