Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069194.t1 | XP_003612915.2 | 98.1 | 215 | 2 | 1 | 1 | 215 | 1 | 213 | 3.50E-116 | 427.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069194.t1 | Q8VZS8 | 66.5 | 209 | 70 | 0 | 4 | 212 | 2 | 210 | 8.0e-77 | 288.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069194.t1 | G7KF38 | 98.1 | 215 | 2 | 1 | 1 | 215 | 1 | 213 | 2.5e-116 | 427.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052795 | MS.gene069194 | 0.819476 | 1.14E-52 | -1.69E-46 |
| MS.gene054809 | MS.gene069194 | 0.832073 | 1.16E-55 | -1.69E-46 |
| MS.gene054810 | MS.gene069194 | 0.864013 | 1.65E-64 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069194.t1 | MTR_5g030500 | 98.140 | 215 | 2 | 1 | 1 | 215 | 1 | 213 | 6.13e-158 | 436 |
| MS.gene069194.t1 | MTR_1g016480 | 55.429 | 175 | 72 | 3 | 33 | 206 | 26 | 195 | 3.98e-66 | 202 |
| MS.gene069194.t1 | MTR_3g071740 | 53.293 | 167 | 72 | 2 | 49 | 215 | 69 | 229 | 5.36e-62 | 193 |
| MS.gene069194.t1 | MTR_5g083270 | 49.505 | 202 | 87 | 5 | 16 | 208 | 8 | 203 | 2.35e-61 | 191 |
| MS.gene069194.t1 | MTR_4g014460 | 54.217 | 166 | 72 | 2 | 46 | 211 | 49 | 210 | 3.51e-56 | 177 |
| MS.gene069194.t1 | MTR_7g070050 | 58.788 | 165 | 65 | 2 | 46 | 208 | 13 | 176 | 3.40e-53 | 169 |
| MS.gene069194.t1 | MTR_8g027805 | 45.856 | 181 | 90 | 4 | 30 | 208 | 1 | 175 | 2.56e-49 | 159 |
| MS.gene069194.t1 | MTR_3g090980 | 48.795 | 166 | 78 | 3 | 45 | 209 | 20 | 179 | 3.18e-49 | 159 |
| MS.gene069194.t1 | MTR_1g028380 | 49.398 | 166 | 77 | 3 | 45 | 209 | 18 | 177 | 8.45e-49 | 158 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069194.t1 | AT5G46790 | 66.507 | 209 | 68 | 1 | 1 | 209 | 1 | 207 | 1.05e-91 | 268 |
| MS.gene069194.t1 | AT5G46790 | 66.507 | 209 | 68 | 1 | 1 | 209 | 1 | 207 | 1.05e-91 | 268 |
| MS.gene069194.t1 | AT4G17870 | 69.022 | 184 | 54 | 1 | 30 | 213 | 1 | 181 | 2.20e-90 | 264 |
| MS.gene069194.t1 | AT2G26040 | 57.558 | 172 | 71 | 2 | 33 | 204 | 9 | 178 | 6.04e-68 | 207 |
| MS.gene069194.t1 | AT1G73000 | 52.432 | 185 | 82 | 3 | 31 | 209 | 22 | 206 | 2.84e-66 | 203 |
| MS.gene069194.t1 | AT5G05440 | 54.938 | 162 | 67 | 2 | 46 | 207 | 45 | 200 | 4.60e-61 | 190 |
| MS.gene069194.t1 | AT2G40330 | 51.534 | 163 | 78 | 1 | 50 | 212 | 52 | 213 | 3.29e-57 | 180 |
| MS.gene069194.t1 | AT2G38310 | 58.491 | 159 | 60 | 1 | 50 | 208 | 43 | 195 | 4.15e-52 | 167 |
| MS.gene069194.t1 | AT4G01026 | 51.250 | 160 | 71 | 3 | 50 | 208 | 27 | 180 | 3.06e-50 | 162 |
| MS.gene069194.t1 | AT5G53160 | 48.780 | 164 | 79 | 2 | 45 | 208 | 18 | 176 | 1.08e-49 | 160 |
| MS.gene069194.t1 | AT1G01360 | 47.904 | 167 | 80 | 3 | 43 | 208 | 18 | 178 | 1.67e-49 | 160 |
| MS.gene069194.t1 | AT4G27920 | 47.879 | 165 | 80 | 3 | 45 | 208 | 13 | 172 | 9.40e-49 | 157 |
| MS.gene069194.t1 | AT5G45860 | 54.000 | 150 | 64 | 2 | 59 | 208 | 10 | 154 | 4.34e-39 | 132 |
| MS.gene069194.t1 | AT5G45870 | 52.667 | 150 | 65 | 2 | 59 | 208 | 10 | 153 | 1.12e-38 | 131 |
| MS.gene069194.t1 | AT4G18620 | 48.408 | 157 | 73 | 3 | 57 | 208 | 7 | 160 | 1.19e-33 | 119 |
| MS.gene069194.t1 | AT5G53160 | 50.485 | 103 | 49 | 1 | 45 | 147 | 18 | 118 | 1.24e-29 | 108 |
Find 72 sgRNAs with CRISPR-Local
Find 73 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTACTTCCGTTCACGGTTT+CGG | 0.321183 | 5.3:-19613731 | MS.gene069194:CDS |
| TGAGATCTGGACCGTTGTTT+TGG | 0.357741 | 5.3:-19613690 | MS.gene069194:CDS |
| GACGACGAACGTCGTGTTAC+CGG | 0.369543 | 5.3:-19613800 | MS.gene069194:CDS |
| CGTTCCGTTACTTCCGTTCA+CGG | 0.394929 | 5.3:-19613737 | MS.gene069194:CDS |
| GGAGGCCGGAGGGGAGTGTT+AGG | 0.404211 | 5.3:+19614104 | None:intergenic |
| ATAAAGTGTTTGTAGATTTG+CGG | 0.406329 | 5.3:+19613935 | None:intergenic |
| TCCTCTTCAGTATTACCTTC+AGG | 0.411978 | 5.3:+19613647 | None:intergenic |
| AGAAGCCTGGAGCATTGGTT+GGG | 0.412638 | 5.3:+19614019 | None:intergenic |
| GTGATAACGGTGGTGAGATC+TGG | 0.416625 | 5.3:-19613703 | MS.gene069194:CDS |
| CTCTCGGTGCTAGTCGCCGC+CGG | 0.416895 | 5.3:+19613836 | None:intergenic |
| ACCGTCACGGTTCTTTCCTT+CGG | 0.424743 | 5.3:+19613565 | None:intergenic |
| TCACACCACACCTACCTCAT+AGG | 0.430563 | 5.3:-19614043 | MS.gene069194:CDS |
| GGTGGAAGCGATGGCGGTGG+AGG | 0.430580 | 5.3:+19614168 | None:intergenic |
| GTCGGAATCTTGATCGGAGG+TGG | 0.456152 | 5.3:+19614150 | None:intergenic |
| ACGCGCCGCCGCAAACCGTC+TGG | 0.474731 | 5.3:-19613982 | MS.gene069194:CDS |
| CAATGTCATCTCCGGTCTCC+CGG | 0.474823 | 5.3:-19613855 | MS.gene069194:CDS |
| GCTAGTCGCCGCCGGGAGAC+CGG | 0.484689 | 5.3:+19613844 | None:intergenic |
| TCCGTTCACGGTTTCGGTGA+CGG | 0.493319 | 5.3:-19613725 | MS.gene069194:CDS |
| ACGACGGACCAGACGGTTTG+CGG | 0.500991 | 5.3:+19613974 | None:intergenic |
| AGACGGTTTGCGGCGGCGCG+TGG | 0.502746 | 5.3:+19613984 | None:intergenic |
| GGAGGTGGAAGCGATGGCGG+TGG | 0.507691 | 5.3:+19614165 | None:intergenic |
| GAGAAGCCTGGAGCATTGGT+TGG | 0.510173 | 5.3:+19614018 | None:intergenic |
| GATGCGTTGAGCGAGAAGCC+TGG | 0.510312 | 5.3:+19614006 | None:intergenic |
| GAAGCCTGGAGCATTGGTTG+GGG | 0.513167 | 5.3:+19614020 | None:intergenic |
| GAGCGAGAAGCCTGGAGCAT+TGG | 0.514906 | 5.3:+19614014 | None:intergenic |
| AGCATTGGTTGGGGCCTATG+AGG | 0.517600 | 5.3:+19614029 | None:intergenic |
| CGCGACGTCAATGTCATCTC+CGG | 0.522159 | 5.3:-19613863 | MS.gene069194:CDS |
| AAAAGCTGCTCTCTCAAAGA+AGG | 0.522505 | 5.3:-19613911 | MS.gene069194:CDS |
| GTCAAGAACGTCGAGTCTCT+CGG | 0.524491 | 5.3:+19613820 | None:intergenic |
| ACCGCCGATGATACTGAAAC+CGG | 0.530952 | 5.3:+19613781 | None:intergenic |
| GGTTTCGGTGACGGTGATAA+CGG | 0.543393 | 5.3:-19613716 | MS.gene069194:CDS |
| TAGGCCCCAACCAATGCTCC+AGG | 0.544690 | 5.3:-19614024 | MS.gene069194:CDS |
| CGGAACGGTAATTCTTCAAA+CGG | 0.546020 | 5.3:+19613753 | None:intergenic |
| GAATTCGTGTTGACGGAGGC+CGG | 0.548211 | 5.3:+19614090 | None:intergenic |
| TTGGTTGGGGCCTATGAGGT+AGG | 0.550389 | 5.3:+19614033 | None:intergenic |
| TTTGCGGTTTGTCGAAGCTA+CGG | 0.554765 | 5.3:+19613951 | None:intergenic |
| ATCGGAGGTGGAAGCGATGG+CGG | 0.560121 | 5.3:+19614162 | None:intergenic |
| GGGAGTCGAATTCGTGTTGA+CGG | 0.560666 | 5.3:+19614083 | None:intergenic |
| TCTCGGTGCTAGTCGCCGCC+GGG | 0.563257 | 5.3:+19613837 | None:intergenic |
| CGTGTTGACGGAGGCCGGAG+GGG | 0.570765 | 5.3:+19614095 | None:intergenic |
| TTGATCGGAGGTGGAAGCGA+TGG | 0.571051 | 5.3:+19614159 | None:intergenic |
| TTCGTGTTGACGGAGGCCGG+AGG | 0.572606 | 5.3:+19614093 | None:intergenic |
| ACCGTCACCGAAACCGTGAA+CGG | 0.574955 | 5.3:+19613724 | None:intergenic |
| TGTGGTGTGAGTTGATGAAA+GGG | 0.576668 | 5.3:+19614056 | None:intergenic |
| GTGACTTACCGTCACCGTCA+CGG | 0.581808 | 5.3:+19613552 | None:intergenic |
| TCGTGTTGACGGAGGCCGGA+GGG | 0.581954 | 5.3:+19614094 | None:intergenic |
| GAAACCGTGAACGGAAGTAA+CGG | 0.584827 | 5.3:+19613733 | None:intergenic |
| GGAAAGAACCGTGACGGTGA+CGG | 0.588055 | 5.3:-19613560 | None:intergenic |
| CACCACCTAACACTCCCCTC+CGG | 0.591738 | 5.3:-19614109 | MS.gene069194:CDS |
| GTGTTAGGTGGTGTTGTGTG+CGG | 0.591821 | 5.3:+19614119 | None:intergenic |
| TACGTCGTTGATGTTCCTGA+AGG | 0.592427 | 5.3:-19613662 | MS.gene069194:CDS |
| TTCGTCGGAATCTTGATCGG+AGG | 0.592857 | 5.3:+19614147 | None:intergenic |
| GTTACCGGTTTCAGTATCAT+CGG | 0.595373 | 5.3:-19613785 | MS.gene069194:CDS |
| GTGTGGTGTGAGTTGATGAA+AGG | 0.597891 | 5.3:+19614055 | None:intergenic |
| TTAGGTGGTGTTGTGTGCGG+TGG | 0.600549 | 5.3:+19614122 | None:intergenic |
| GGCCGGAGGGGAGTGTTAGG+TGG | 0.606358 | 5.3:+19614107 | None:intergenic |
| AAGCTTGCGTCTGTCACCGA+AGG | 0.615885 | 5.3:-19613581 | MS.gene069194:CDS |
| TGAGTTGATGAAAGGGACGA+GGG | 0.616316 | 5.3:+19614063 | None:intergenic |
| TCCTGAAGGTAATACTGAAG+AGG | 0.617871 | 5.3:-19613648 | MS.gene069194:CDS |
| GTGAGTTGATGAAAGGGACG+AGG | 0.618853 | 5.3:+19614062 | None:intergenic |
| TGGGGCCTATGAGGTAGGTG+TGG | 0.623679 | 5.3:+19614038 | None:intergenic |
| GCTACGGACGACGGACCAGA+CGG | 0.637251 | 5.3:+19613967 | None:intergenic |
| ACGGACCAGACGGTTTGCGG+CGG | 0.644883 | 5.3:+19613977 | None:intergenic |
| ACCGGTTTCAGTATCATCGG+CGG | 0.669189 | 5.3:-19613782 | MS.gene069194:CDS |
| ACCGAAGGAAAGAACCGTGA+CGG | 0.674541 | 5.3:-19613566 | MS.gene069194:CDS |
| AGTCGAATTCGTGTTGACGG+AGG | 0.683583 | 5.3:+19614086 | None:intergenic |
| TTTGTCGAAGCTACGGACGA+CGG | 0.690180 | 5.3:+19613958 | None:intergenic |
| GACGTAAGATTCCAAAACAA+CGG | 0.691402 | 5.3:+19613679 | None:intergenic |
| TTCGGTGACGGTGATAACGG+TGG | 0.691549 | 5.3:-19613713 | MS.gene069194:CDS |
| TGTCATCTCCGGTCTCCCGG+CGG | 0.695228 | 5.3:-19613852 | MS.gene069194:CDS |
| CGTGAACGGAAGTAACGGAA+CGG | 0.712612 | 5.3:+19613738 | None:intergenic |
| CTGAAGATTAAGCTTCACAA+CGG | 0.714266 | 5.3:+19613604 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAGTGTTTGTAGATTTG+CGG | + | chr5.3:19613813-19613832 | None:intergenic | 25.0% |
| ! | GAAGGTTTTCAAATGAAAGT+CGG | - | chr5.3:19613852-19613871 | MS.gene069194:CDS | 30.0% |
| CTGAAGATTAAGCTTCACAA+CGG | + | chr5.3:19614144-19614163 | None:intergenic | 35.0% | |
| GACGTAAGATTCCAAAACAA+CGG | + | chr5.3:19614069-19614088 | None:intergenic | 35.0% | |
| AAAAGCTGCTCTCTCAAAGA+AGG | - | chr5.3:19613834-19613853 | MS.gene069194:CDS | 40.0% | |
| CGGAACGGTAATTCTTCAAA+CGG | + | chr5.3:19613995-19614014 | None:intergenic | 40.0% | |
| TCCTCTTCAGTATTACCTTC+AGG | + | chr5.3:19614101-19614120 | None:intergenic | 40.0% | |
| TCCTGAAGGTAATACTGAAG+AGG | - | chr5.3:19614097-19614116 | MS.gene069194:CDS | 40.0% | |
| ! | GTTTTCGTCGGAATCTTGAT+CGG | + | chr5.3:19613604-19613623 | None:intergenic | 40.0% |
| !! | GTTACCGGTTTCAGTATCAT+CGG | - | chr5.3:19613960-19613979 | MS.gene069194:CDS | 40.0% |
| !! | TGTGGTGTGAGTTGATGAAA+GGG | + | chr5.3:19613692-19613711 | None:intergenic | 40.0% |
| GAAACCGTGAACGGAAGTAA+CGG | + | chr5.3:19614015-19614034 | None:intergenic | 45.0% | |
| GTTACTTCCGTTCACGGTTT+CGG | - | chr5.3:19614014-19614033 | MS.gene069194:CDS | 45.0% | |
| TACGTCGTTGATGTTCCTGA+AGG | - | chr5.3:19614083-19614102 | MS.gene069194:CDS | 45.0% | |
| TTTGCGGTTTGTCGAAGCTA+CGG | + | chr5.3:19613797-19613816 | None:intergenic | 45.0% | |
| ! | TGAGATCTGGACCGTTGTTT+TGG | - | chr5.3:19614055-19614074 | MS.gene069194:CDS | 45.0% |
| !! | GTGTGGTGTGAGTTGATGAA+AGG | + | chr5.3:19613693-19613712 | None:intergenic | 45.0% |
| !! | TGAGTTGATGAAAGGGACGA+GGG | + | chr5.3:19613685-19613704 | None:intergenic | 45.0% |
| ACCGAAGGAAAGAACCGTGA+CGG | - | chr5.3:19614179-19614198 | MS.gene069194:CDS | 50.0% | |
| ACCGCCGATGATACTGAAAC+CGG | + | chr5.3:19613967-19613986 | None:intergenic | 50.0% | |
| ACCGTCACGGTTCTTTCCTT+CGG | + | chr5.3:19614183-19614202 | None:intergenic | 50.0% | |
| CGTTCCGTTACTTCCGTTCA+CGG | - | chr5.3:19614008-19614027 | MS.gene069194:CDS | 50.0% | |
| GGGAGTCGAATTCGTGTTGA+CGG | + | chr5.3:19613665-19613684 | None:intergenic | 50.0% | |
| GTCAAGAACGTCGAGTCTCT+CGG | + | chr5.3:19613928-19613947 | None:intergenic | 50.0% | |
| TCACACCACACCTACCTCAT+AGG | - | chr5.3:19613702-19613721 | MS.gene069194:CDS | 50.0% | |
| TTCGTCGGAATCTTGATCGG+AGG | + | chr5.3:19613601-19613620 | None:intergenic | 50.0% | |
| TTTGTCGAAGCTACGGACGA+CGG | + | chr5.3:19613790-19613809 | None:intergenic | 50.0% | |
| ! | ACCGGTTTCAGTATCATCGG+CGG | - | chr5.3:19613963-19613982 | MS.gene069194:CDS | 50.0% |
| ! | AGTCGAATTCGTGTTGACGG+AGG | + | chr5.3:19613662-19613681 | None:intergenic | 50.0% |
| ! | CGTGAACGGAAGTAACGGAA+CGG | + | chr5.3:19614010-19614029 | None:intergenic | 50.0% |
| ! | GGTTTCGGTGACGGTGATAA+CGG | - | chr5.3:19614029-19614048 | MS.gene069194:CDS | 50.0% |
| ! | TTGTGTGCGGTGGTTTTCGT+CGG | + | chr5.3:19613616-19613635 | None:intergenic | 50.0% |
| !! | AGAAGCCTGGAGCATTGGTT+GGG | + | chr5.3:19613729-19613748 | None:intergenic | 50.0% |
| !! | GTGAGTTGATGAAAGGGACG+AGG | + | chr5.3:19613686-19613705 | None:intergenic | 50.0% |
| !! | GTGATAACGGTGGTGAGATC+TGG | - | chr5.3:19614042-19614061 | MS.gene069194:CDS | 50.0% |
| !! | GTGTTAGGTGGTGTTGTGTG+CGG | + | chr5.3:19613629-19613648 | None:intergenic | 50.0% |
| AAGCTTGCGTCTGTCACCGA+AGG | - | chr5.3:19614164-19614183 | MS.gene069194:CDS | 55.0% | |
| ACCGTCACCGAAACCGTGAA+CGG | + | chr5.3:19614024-19614043 | None:intergenic | 55.0% | |
| CAATGTCATCTCCGGTCTCC+CGG | - | chr5.3:19613890-19613909 | MS.gene069194:CDS | 55.0% | |
| CGCGACGTCAATGTCATCTC+CGG | - | chr5.3:19613882-19613901 | MS.gene069194:CDS | 55.0% | |
| GACGACGAACGTCGTGTTAC+CGG | - | chr5.3:19613945-19613964 | MS.gene069194:CDS | 55.0% | |
| GTCGGAATCTTGATCGGAGG+TGG | + | chr5.3:19613598-19613617 | None:intergenic | 55.0% | |
| TCCGTTCACGGTTTCGGTGA+CGG | - | chr5.3:19614020-19614039 | MS.gene069194:CDS | 55.0% | |
| TTGATCGGAGGTGGAAGCGA+TGG | + | chr5.3:19613589-19613608 | None:intergenic | 55.0% | |
| TTGGTTGGGGCCTATGAGGT+AGG | + | chr5.3:19613715-19613734 | None:intergenic | 55.0% | |
| ! | GAATTCGTGTTGACGGAGGC+CGG | + | chr5.3:19613658-19613677 | None:intergenic | 55.0% |
| !! | AGCATTGGTTGGGGCCTATG+AGG | + | chr5.3:19613719-19613738 | None:intergenic | 55.0% |
| !! | GAAGCCTGGAGCATTGGTTG+GGG | + | chr5.3:19613728-19613747 | None:intergenic | 55.0% |
| !! | GAGAAGCCTGGAGCATTGGT+TGG | + | chr5.3:19613730-19613749 | None:intergenic | 55.0% |
| !! | TTAGGTGGTGTTGTGTGCGG+TGG | + | chr5.3:19613626-19613645 | None:intergenic | 55.0% |
| !! | TTCGGTGACGGTGATAACGG+TGG | - | chr5.3:19614032-19614051 | MS.gene069194:CDS | 55.0% |
| ACGACGGACCAGACGGTTTG+CGG | + | chr5.3:19613774-19613793 | None:intergenic | 60.0% | |
| ATCGGAGGTGGAAGCGATGG+CGG | + | chr5.3:19613586-19613605 | None:intergenic | 60.0% | |
| CACCACCTAACACTCCCCTC+CGG | - | chr5.3:19613636-19613655 | MS.gene069194:CDS | 60.0% | |
| GAGCGAGAAGCCTGGAGCAT+TGG | + | chr5.3:19613734-19613753 | None:intergenic | 60.0% | |
| GATGCGTTGAGCGAGAAGCC+TGG | + | chr5.3:19613742-19613761 | None:intergenic | 60.0% | |
| TAGGCCCCAACCAATGCTCC+AGG | - | chr5.3:19613721-19613740 | MS.gene069194:CDS | 60.0% | |
| TGGGGCCTATGAGGTAGGTG+TGG | + | chr5.3:19613710-19613729 | None:intergenic | 60.0% | |
| ACGGACCAGACGGTTTGCGG+CGG | + | chr5.3:19613771-19613790 | None:intergenic | 65.0% | |
| GCTACGGACGACGGACCAGA+CGG | + | chr5.3:19613781-19613800 | None:intergenic | 65.0% | |
| TGTCATCTCCGGTCTCCCGG+CGG | - | chr5.3:19613893-19613912 | MS.gene069194:CDS | 65.0% | |
| ! | TCGTGTTGACGGAGGCCGGA+GGG | + | chr5.3:19613654-19613673 | None:intergenic | 65.0% |
| ! | TTCGTGTTGACGGAGGCCGG+AGG | + | chr5.3:19613655-19613674 | None:intergenic | 65.0% |
| ! | CGTGTTGACGGAGGCCGGAG+GGG | + | chr5.3:19613653-19613672 | None:intergenic | 70.0% |
| ! | GGAGGTGGAAGCGATGGCGG+TGG | + | chr5.3:19613583-19613602 | None:intergenic | 70.0% |
| ! | GGTGGAAGCGATGGCGGTGG+AGG | + | chr5.3:19613580-19613599 | None:intergenic | 70.0% |
| !! | CTCTCGGTGCTAGTCGCCGC+CGG | + | chr5.3:19613912-19613931 | None:intergenic | 70.0% |
| !! | GGAGGCCGGAGGGGAGTGTT+AGG | + | chr5.3:19613644-19613663 | None:intergenic | 70.0% |
| !! | GGCCGGAGGGGAGTGTTAGG+TGG | + | chr5.3:19613641-19613660 | None:intergenic | 70.0% |
| !! | TCTCGGTGCTAGTCGCCGCC+GGG | + | chr5.3:19613911-19613930 | None:intergenic | 70.0% |
| ACGCGCCGCCGCAAACCGTC+TGG | - | chr5.3:19613763-19613782 | MS.gene069194:CDS | 75.0% | |
| AGACGGTTTGCGGCGGCGCG+TGG | + | chr5.3:19613764-19613783 | None:intergenic | 75.0% | |
| GCTAGTCGCCGCCGGGAGAC+CGG | + | chr5.3:19613904-19613923 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 19613561 | 19614206 | 19613561 | ID=MS.gene069194 |
| chr5.3 | mRNA | 19613561 | 19614206 | 19613561 | ID=MS.gene069194.t1;Parent=MS.gene069194 |
| chr5.3 | exon | 19613561 | 19614206 | 19613561 | ID=MS.gene069194.t1.exon1;Parent=MS.gene069194.t1 |
| chr5.3 | CDS | 19613561 | 19614206 | 19613561 | ID=cds.MS.gene069194.t1;Parent=MS.gene069194.t1 |
| Gene Sequence |
| Protein sequence |
