Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06941.t1 | XP_003602229.2 | 99 | 677 | 7 | 0 | 1 | 677 | 1 | 677 | 0.00E+00 | 1343.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06941.t1 | Q9LV04 | 67.8 | 628 | 189 | 5 | 52 | 675 | 51 | 669 | 1.4e-244 | 847.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06941.t1 | G7J6U8 | 99.0 | 677 | 7 | 0 | 1 | 677 | 1 | 677 | 0.0e+00 | 1343.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050209 | MS.gene06941 | 0.800468 | 1.42E-48 | -1.69E-46 |
| MS.gene050508 | MS.gene06941 | 0.813646 | 2.30E-51 | -1.69E-46 |
| MS.gene051064 | MS.gene06941 | 0.804945 | 1.69E-49 | -1.69E-46 |
| MS.gene055946 | MS.gene06941 | 0.817595 | 3.04E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06941.t1 | MTR_3g091290 | 98.966 | 677 | 7 | 0 | 1 | 677 | 1 | 677 | 0.0 | 1383 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06941.t1 | AT5G53450 | 67.834 | 628 | 189 | 5 | 52 | 675 | 51 | 669 | 0.0 | 875 |
| MS.gene06941.t1 | AT5G53450 | 69.140 | 593 | 175 | 4 | 87 | 675 | 1 | 589 | 0.0 | 849 |
| MS.gene06941.t1 | AT5G53450 | 73.171 | 410 | 104 | 2 | 52 | 460 | 51 | 455 | 0.0 | 620 |
Find 193 sgRNAs with CRISPR-Local
Find 425 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCAAAATGTCAGACTTTA+AGG | 0.129862 | 3.1:+73239414 | MS.gene06941:CDS |
| TGCCCACTTCATTGACTTAT+TGG | 0.179035 | 3.1:+73243843 | MS.gene06941:CDS |
| AACTGGGCCATACCCGATTT+TGG | 0.210340 | 3.1:+73239165 | MS.gene06941:CDS |
| CTTTGATATGTCTGTCTATT+GGG | 0.212760 | 3.1:-73240474 | None:intergenic |
| ACTTTGATATGTCTGTCTAT+TGG | 0.221644 | 3.1:-73240475 | None:intergenic |
| TTTGACAAATCAAATATTTC+AGG | 0.222651 | 3.1:-73244706 | None:intergenic |
| AACTGGCTGGAGCTGCTTCC+AGG | 0.254995 | 3.1:+73244184 | MS.gene06941:CDS |
| TTGATGAGAGATCTTCTAAT+TGG | 0.256001 | 3.1:+73240264 | MS.gene06941:CDS |
| CTCGTTCTTCGAGGGGTTAA+TGG | 0.264678 | 3.1:+73244763 | MS.gene06941:CDS |
| CCAAACCTTCTCGGAGAATA+AGG | 0.274308 | 3.1:+73243140 | MS.gene06941:CDS |
| CTGGAGGTCCCGCAATTTCT+AGG | 0.275529 | 3.1:+73240220 | MS.gene06941:CDS |
| CCCTGCAGCCAAGTTTGCTT+CGG | 0.287848 | 3.1:+73244588 | MS.gene06941:CDS |
| TGGAGCTGCTTCCAGGAAAA+TGG | 0.295461 | 3.1:+73244191 | MS.gene06941:CDS |
| AATGGTAATGGGAGAGCTTA+TGG | 0.295872 | 3.1:+73241433 | MS.gene06941:CDS |
| CGCAGATGCTTGATAGGAAC+TGG | 0.312588 | 3.1:+73243080 | MS.gene06941:intron |
| CCACAAAAGACCTTGTAAAT+AGG | 0.336553 | 3.1:-73244795 | None:intergenic |
| ATGCAAACGGAAGAGGTCTT+TGG | 0.344391 | 3.1:-73239364 | None:intergenic |
| ACAATGGCACTTTGTAGAAC+TGG | 0.349658 | 3.1:+73239148 | None:intergenic |
| AAGAATGATACAAAAGTTTA+CGG | 0.352849 | 3.1:-73239862 | None:intergenic |
| TCTTACTCAATGCAAGTTCA+TGG | 0.355670 | 3.1:+73239881 | MS.gene06941:CDS |
| ACAGTTGTTTGGATGCTCTA+AGG | 0.356940 | 3.1:+73243481 | MS.gene06941:intron |
| CTTTCCTTCGTCTCTGACAT+TGG | 0.357555 | 3.1:+73244331 | MS.gene06941:CDS |
| AGGACATTACTCTCCAAAAT+CGG | 0.359879 | 3.1:-73239178 | None:intergenic |
| TCATGAATTACCTTTGGCTT+TGG | 0.361109 | 3.1:-73243883 | None:intergenic |
| AGATTGGCTTCAAACTTTAG+AGG | 0.363419 | 3.1:+73240146 | MS.gene06941:CDS |
| TTGCTAGCAATAGAGATAAA+AGG | 0.372155 | 3.1:-73243117 | None:intergenic |
| AGCTAAAGCCTCCTCATTGC+CGG | 0.372894 | 3.1:-73244503 | None:intergenic |
| TTTCCAGCCTCAACTCTGTA+TGG | 0.381724 | 3.1:-73240438 | None:intergenic |
| CCTTATTCTCCGAGAAGGTT+TGG | 0.381787 | 3.1:-73243140 | None:intergenic |
| CCTGCAGCCAAGTTTGCTTC+GGG | 0.385599 | 3.1:+73244589 | MS.gene06941:CDS |
| CCTGTTCCCCTGCGTTTCGC+TGG | 0.387171 | 3.1:+73239241 | MS.gene06941:CDS |
| TAAGGCACCCATTCCTTTGT+GGG | 0.389110 | 3.1:+73243499 | MS.gene06941:CDS |
| TGCTAGCAACCAAACCTTCT+CGG | 0.390736 | 3.1:+73243131 | MS.gene06941:CDS |
| TGAAATGTTCTACAGTTGTT+TGG | 0.391603 | 3.1:+73243470 | MS.gene06941:intron |
| TTGGCTGCAGGGAGACTTGA+TGG | 0.392350 | 3.1:-73244577 | None:intergenic |
| AGGCTCTCATTCCGCCCTTC+CGG | 0.392663 | 3.1:+73244484 | MS.gene06941:CDS |
| CTAAGGCACCCATTCCTTTG+TGG | 0.393568 | 3.1:+73243498 | MS.gene06941:CDS |
| TGCGAGGATGGTTCAAATAG+AGG | 0.402772 | 3.1:+73241256 | MS.gene06941:CDS |
| TGGTTCAAATAGAGGCTCTA+TGG | 0.411364 | 3.1:+73241264 | MS.gene06941:CDS |
| CCAGCGAAACGCAGGGGAAC+AGG | 0.418450 | 3.1:-73239241 | None:intergenic |
| ATCTTGGCCCACAAAGGAAT+GGG | 0.427323 | 3.1:-73243506 | None:intergenic |
| GAACCACTACCACCACTTGC+AGG | 0.429048 | 3.1:-73239917 | None:intergenic |
| ATTGGATTCTCAGTCATGAT+TGG | 0.433535 | 3.1:+73244349 | MS.gene06941:CDS |
| ATTGCACTGGGAGGCATGTT+GGG | 0.434475 | 3.1:+73244224 | MS.gene06941:CDS |
| AATATCACCCGAAGCAAACT+TGG | 0.434914 | 3.1:-73244596 | None:intergenic |
| AACTCTCCATATGGAAATGC+TGG | 0.437695 | 3.1:+73242956 | MS.gene06941:CDS |
| TCTTCATTTATACTAAGAGC+TGG | 0.440657 | 3.1:+73244424 | MS.gene06941:CDS |
| CAAGGTTGCTCGTTCTTCGA+GGG | 0.443241 | 3.1:+73244755 | MS.gene06941:CDS |
| CTTGATAGGAACTGGGGTGC+TGG | 0.444714 | 3.1:+73243088 | MS.gene06941:CDS |
| ACTGGCTTCAACAGTCAGAT+TGG | 0.445941 | 3.1:+73240130 | MS.gene06941:CDS |
| GCAAGGTTAAGGACAGTGTT+AGG | 0.447501 | 3.1:+73239581 | MS.gene06941:CDS |
| GATCGTGTTAGCATTGGCCT+TGG | 0.450399 | 3.1:+73239442 | MS.gene06941:CDS |
| CGTGTTAGCATTGGCCTTGG+TGG | 0.453499 | 3.1:+73239445 | MS.gene06941:CDS |
| CGCAATTGCCTAGAAATTGC+GGG | 0.453953 | 3.1:-73240228 | None:intergenic |
| CCCGAAGCAAACTTGGCTGC+AGG | 0.454307 | 3.1:-73244589 | None:intergenic |
| ATCTGCATCTGCTTCTTCAA+TGG | 0.455111 | 3.1:+73239324 | MS.gene06941:CDS |
| TTAGCATTGGCCTTGGTGGA+CGG | 0.458317 | 3.1:+73239449 | MS.gene06941:CDS |
| CTCGGCAGAAACTCTCCATA+TGG | 0.459506 | 3.1:+73242947 | MS.gene06941:CDS |
| CGTTTGCATGGAGGAGGAAA+CGG | 0.461428 | 3.1:+73239378 | MS.gene06941:CDS |
| TCAAGGTTGCTCGTTCTTCG+AGG | 0.464225 | 3.1:+73244754 | MS.gene06941:CDS |
| TGTAAGCCAGCATTTCCATA+TGG | 0.466848 | 3.1:-73242962 | None:intergenic |
| TAGCATTGGCCTTGGTGGAC+GGG | 0.468949 | 3.1:+73239450 | MS.gene06941:CDS |
| GATATTATCAGATGGGGTCT+AGG | 0.469138 | 3.1:+73243549 | MS.gene06941:CDS |
| CATTCCTTTGTGGGCCAAGA+TGG | 0.470311 | 3.1:+73243508 | MS.gene06941:CDS |
| TTGACAAATCAAATATTTCA+GGG | 0.473307 | 3.1:-73244705 | None:intergenic |
| TTGATGGAAACTCCTTGAAA+GGG | 0.473643 | 3.1:-73244561 | None:intergenic |
| GCGGATGAGGTGGTGTTTGA+AGG | 0.474409 | 3.1:+73239559 | MS.gene06941:CDS |
| TATTGCACTGGGAGGCATGT+TGG | 0.474879 | 3.1:+73244223 | MS.gene06941:CDS |
| ATGTTTGCGACAGCTTATGA+TGG | 0.477520 | 3.1:+73242919 | MS.gene06941:CDS |
| TCGAGGAAAACGAGCAATAG+AGG | 0.477773 | 3.1:+73239741 | MS.gene06941:CDS |
| CTCCTCCATGCAAACGGAAG+AGG | 0.478760 | 3.1:-73239371 | None:intergenic |
| TGGCGCCTATTGTATTGCAC+TGG | 0.478793 | 3.1:+73244211 | MS.gene06941:CDS |
| CTTCAAGGTATTGAAGAAGC+TGG | 0.479242 | 3.1:+73239835 | MS.gene06941:intron |
| ATTACCTTTGGCTTTGGATG+AGG | 0.480526 | 3.1:-73243877 | None:intergenic |
| TACTTAACAGGTCGGTACAC+TGG | 0.480880 | 3.1:+73241216 | MS.gene06941:intron |
| GCCTCCCAGTGCAATACAAT+AGG | 0.481435 | 3.1:-73244216 | None:intergenic |
| TTGAACTTTGCGAATATCAA+AGG | 0.482258 | 3.1:-73241458 | None:intergenic |
| CACTGGACGAAGAATCTGTT+AGG | 0.487203 | 3.1:+73240178 | MS.gene06941:CDS |
| ATCTGTGTTACAAAGATGCA+TGG | 0.496023 | 3.1:+73241394 | MS.gene06941:intron |
| CAGTCATGATTGGTCAGGAC+TGG | 0.496294 | 3.1:+73244359 | MS.gene06941:CDS |
| TAGTAGAGAATCAAAGTTGA+AGG | 0.500017 | 3.1:+73244303 | MS.gene06941:CDS |
| CATCTTGGCCCACAAAGGAA+TGG | 0.503376 | 3.1:-73243507 | None:intergenic |
| AAGGTAGGAGAAGACACAAC+TGG | 0.503564 | 3.1:+73240201 | MS.gene06941:CDS |
| ATTCTCAGTCATGATTGGTC+AGG | 0.504324 | 3.1:+73244354 | MS.gene06941:CDS |
| AAAGACCTCTTCCGTTTGCA+TGG | 0.506817 | 3.1:+73239366 | MS.gene06941:CDS |
| CTCTTCCGTTTGCATGGAGG+AGG | 0.508865 | 3.1:+73239372 | MS.gene06941:CDS |
| CTTCATTTATACTAAGAGCT+GGG | 0.510302 | 3.1:+73244425 | MS.gene06941:CDS |
| GGTGTTTGAAGGCAAGGTTA+AGG | 0.513946 | 3.1:+73239570 | MS.gene06941:CDS |
| GACGGGACTACTCGCCATCT+TGG | 0.515034 | 3.1:-73243522 | None:intergenic |
| ATAGGAACTGGGGTGCTGGT+TGG | 0.515505 | 3.1:+73243092 | MS.gene06941:CDS |
| CATGACAAAGCTGGTAAAAG+AGG | 0.515642 | 3.1:+73244385 | MS.gene06941:CDS |
| TAACTCTTGTGTTATACAAA+GGG | 0.516202 | 3.1:-73239684 | None:intergenic |
| TTTAGAGGCCACTCTTGCAC+TGG | 0.516388 | 3.1:+73240161 | MS.gene06941:CDS |
| CCTCCTGTCCGTGTACTAGT+TGG | 0.516400 | 3.1:+73244262 | MS.gene06941:CDS |
| CACATATAAATTTGTCGACA+AGG | 0.518285 | 3.1:+73239209 | MS.gene06941:CDS |
| CGTTTCCTCCTCCATGCAAA+CGG | 0.520200 | 3.1:-73239377 | None:intergenic |
| GTTCATTTATCCTAGTCCAC+GGG | 0.521851 | 3.1:+73239936 | MS.gene06941:CDS |
| GGACATTACTCTCCAAAATC+GGG | 0.523573 | 3.1:-73239177 | None:intergenic |
| CTTGATGGAAACTCCTTGAA+AGG | 0.524857 | 3.1:-73244562 | None:intergenic |
| ATGATTGTCCAGCGAAACGC+AGG | 0.526569 | 3.1:-73239249 | None:intergenic |
| CAATGGCACTTTGTAGAACT+GGG | 0.530134 | 3.1:+73239149 | None:intergenic |
| TGGTAAAAGAGGAAGGGTGC+AGG | 0.532874 | 3.1:+73244396 | MS.gene06941:CDS |
| ATCTGATAATATCCATCGAC+GGG | 0.535110 | 3.1:-73243539 | None:intergenic |
| GGTTCATTTATCCTAGTCCA+CGG | 0.538254 | 3.1:+73239935 | MS.gene06941:CDS |
| CCGCCCTTCCGGCAATGAGG+AGG | 0.538522 | 3.1:+73244495 | MS.gene06941:CDS |
| GTACATTTATCGTCAGCCTC+AGG | 0.540143 | 3.1:+73243599 | MS.gene06941:CDS |
| GTCAGAGACGAAGGAAAGGT+TGG | 0.543516 | 3.1:-73244326 | None:intergenic |
| TTCCAGCCTCAACTCTGTAT+GGG | 0.543666 | 3.1:-73240437 | None:intergenic |
| AGATACATACCCCGTGGACT+AGG | 0.544042 | 3.1:-73239946 | None:intergenic |
| TGAGGTGGTGTTTGAAGGCA+AGG | 0.544552 | 3.1:+73239564 | MS.gene06941:CDS |
| CTAGTACACGGACAGGAGGT+TGG | 0.544865 | 3.1:-73244258 | None:intergenic |
| ACTTAACAGGTCGGTACACT+GGG | 0.545500 | 3.1:+73241217 | MS.gene06941:intron |
| ATAACTCTTGTGTTATACAA+AGG | 0.547349 | 3.1:-73239685 | None:intergenic |
| GATTGTGTGTGGAACTTATG+TGG | 0.547710 | 3.1:+73244729 | MS.gene06941:CDS |
| TTACTCTCCAAAATCGGGTA+TGG | 0.548971 | 3.1:-73239172 | None:intergenic |
| GACAAATCAAATATTTCAGG+GGG | 0.549563 | 3.1:-73244703 | None:intergenic |
| AATTTATATGTGAATAAGCT+AGG | 0.549732 | 3.1:-73239198 | None:intergenic |
| TGCCCATACAGAGTTGAGGC+TGG | 0.551335 | 3.1:+73240435 | MS.gene06941:CDS |
| GTCGATGGATATTATCAGAT+GGG | 0.551619 | 3.1:+73243542 | MS.gene06941:CDS |
| TAGAGGCTCTATGGAAAACA+TGG | 0.554608 | 3.1:+73241273 | MS.gene06941:CDS |
| GATCAGCTCTCCTATTTACA+AGG | 0.554698 | 3.1:+73244785 | MS.gene06941:CDS |
| TTCTTCGTCCAGTGCAAGAG+TGG | 0.555251 | 3.1:-73240169 | None:intergenic |
| TGAACCATCCTCGCAAAAGT+CGG | 0.556616 | 3.1:-73241248 | None:intergenic |
| GCATACCTTATTCTCCGAGA+AGG | 0.557155 | 3.1:-73243145 | None:intergenic |
| TTCAAGGTATTGAAGAAGCT+GGG | 0.558924 | 3.1:+73239836 | MS.gene06941:intron |
| ATCTCGTTGCCTGCAAGTGG+TGG | 0.559120 | 3.1:+73239908 | MS.gene06941:CDS |
| AAAGCCTCCTCATTGCCGGA+AGG | 0.559182 | 3.1:-73244499 | None:intergenic |
| ATGGCGAGTAGTCCCGTCGA+TGG | 0.559384 | 3.1:+73243527 | MS.gene06941:CDS |
| AGGAAACGGATCATGTTATG+AGG | 0.560637 | 3.1:+73239392 | MS.gene06941:CDS |
| TTGCCTGCAAGTGGTGGTAG+TGG | 0.560869 | 3.1:+73239914 | MS.gene06941:CDS |
| TCGCAATTGCCTAGAAATTG+CGG | 0.561333 | 3.1:-73240229 | None:intergenic |
| CGTCGATGGATATTATCAGA+TGG | 0.561808 | 3.1:+73243541 | MS.gene06941:CDS |
| GCTCTATGGAAAACATGGAC+AGG | 0.562416 | 3.1:+73241278 | MS.gene06941:CDS |
| GAAGAATCTGTTAGGAAGGT+AGG | 0.562509 | 3.1:+73240186 | MS.gene06941:CDS |
| CCGAAGCAAACTTGGCTGCA+GGG | 0.563666 | 3.1:-73244588 | None:intergenic |
| GACTGGCCTCATGACAAAGC+TGG | 0.565510 | 3.1:+73244376 | MS.gene06941:CDS |
| ACAAAGCTGGTAAAAGAGGA+AGG | 0.567006 | 3.1:+73244389 | MS.gene06941:CDS |
| GTTAATTACCTGCATAGTCA+TGG | 0.568531 | 3.1:+73240409 | MS.gene06941:CDS |
| TTCAATGGAGTCGCATGAAG+AGG | 0.571118 | 3.1:+73239339 | MS.gene06941:CDS |
| CACGGACAGGAGGTTGGCGA+AGG | 0.572597 | 3.1:-73244252 | None:intergenic |
| AAGCCTCCTCATTGCCGGAA+GGG | 0.572759 | 3.1:-73244498 | None:intergenic |
| TCTGTGTTACAAAGATGCAT+GGG | 0.575090 | 3.1:+73241395 | MS.gene06941:intron |
| GGGCAAGACCATGACTATGC+AGG | 0.575441 | 3.1:-73240417 | None:intergenic |
| GCTGGACAATCATCAAATGC+AGG | 0.586031 | 3.1:+73239259 | MS.gene06941:CDS |
| TTATACTAAGAGCTGGGAGA+CGG | 0.586602 | 3.1:+73244431 | MS.gene06941:CDS |
| TCTCCAACTAGTACACGGAC+AGG | 0.586958 | 3.1:-73244265 | None:intergenic |
| CCTCCTCATTGCCGGAAGGG+CGG | 0.591041 | 3.1:-73244495 | None:intergenic |
| GCAGATGCTTGATAGGAACT+GGG | 0.593828 | 3.1:+73243081 | MS.gene06941:intron |
| TGACAAATCAAATATTTCAG+GGG | 0.599665 | 3.1:-73244704 | None:intergenic |
| CTCCAATAAGTCAATGAAGT+GGG | 0.600928 | 3.1:-73243845 | None:intergenic |
| CAATGTCAGAGACGAAGGAA+AGG | 0.601326 | 3.1:-73244330 | None:intergenic |
| GGCGCCTATTGTATTGCACT+GGG | 0.603294 | 3.1:+73244212 | MS.gene06941:CDS |
| CACTGCAATGCGTATTAGTG+AGG | 0.603654 | 3.1:+73243575 | MS.gene06941:CDS |
| AAGGTTGCTCGTTCTTCGAG+GGG | 0.606778 | 3.1:+73244756 | MS.gene06941:CDS |
| ATAAGCTGTCGCAAACATGA+AGG | 0.607676 | 3.1:-73242914 | None:intergenic |
| TTCATGTGTCCAGAACTGGC+TGG | 0.607798 | 3.1:+73244171 | MS.gene06941:intron |
| GATTTGTCAAAGATTGTGTG+TGG | 0.608670 | 3.1:+73244718 | MS.gene06941:CDS |
| TAACTTGCCATACCTTTGTG+AGG | 0.609041 | 3.1:-73241487 | None:intergenic |
| GGACGAAGAATCTGTTAGGA+AGG | 0.614608 | 3.1:+73240182 | MS.gene06941:CDS |
| TATATCTCGTTGCCTGCAAG+TGG | 0.614918 | 3.1:+73239905 | MS.gene06941:CDS |
| TCTCCAATAAGTCAATGAAG+TGG | 0.615738 | 3.1:-73243846 | None:intergenic |
| CAGCTTATGATGGAAATCCT+CGG | 0.622225 | 3.1:+73242929 | MS.gene06941:CDS |
| GAATCCAATGTCAGAGACGA+AGG | 0.623030 | 3.1:-73244335 | None:intergenic |
| CTCGCCATCTTGGCCCACAA+AGG | 0.624193 | 3.1:-73243512 | None:intergenic |
| GTGGAACTTATGTGGACTCA+AGG | 0.624300 | 3.1:+73244737 | MS.gene06941:CDS |
| TGATGGAAACTCCTTGAAAG+GGG | 0.625886 | 3.1:-73244560 | None:intergenic |
| TAATATGCAGTTCTTCACTA+CGG | 0.627898 | 3.1:+73239299 | MS.gene06941:CDS |
| CATCTGATAATATCCATCGA+CGG | 0.629067 | 3.1:-73243540 | None:intergenic |
| GTTCAAATCATTCCTCACAA+AGG | 0.633223 | 3.1:+73241475 | MS.gene06941:CDS |
| GTCTTGCCCATACAGAGTTG+AGG | 0.635746 | 3.1:+73240431 | MS.gene06941:CDS |
| TGATGATTGCATTTGACATG+AGG | 0.640141 | 3.1:+73241308 | MS.gene06941:CDS |
| GAATCCTCATCCAAAGCCAA+AGG | 0.640345 | 3.1:+73243873 | MS.gene06941:CDS |
| TTTGCTATAGGCGGATGAGG+TGG | 0.651791 | 3.1:+73239549 | MS.gene06941:intron |
| ATTCCGCCCTTCCGGCAATG+AGG | 0.652081 | 3.1:+73244492 | MS.gene06941:CDS |
| ACCATCCTCGCAAAAGTCGG+CGG | 0.658632 | 3.1:-73241245 | None:intergenic |
| GCCTATTGTATTGCACTGGG+AGG | 0.658776 | 3.1:+73244215 | MS.gene06941:CDS |
| CAAAGCTGGTAAAAGAGGAA+GGG | 0.663205 | 3.1:+73244390 | MS.gene06941:CDS |
| GACCTCTTCCGTTTGCATGG+AGG | 0.665410 | 3.1:+73239369 | MS.gene06941:CDS |
| TGCAGGCAAGAGAAAGCACA+AGG | 0.672647 | 3.1:+73239276 | MS.gene06941:CDS |
| AGTTCCCAAGCTCAGCGTCG+AGG | 0.673683 | 3.1:+73239724 | MS.gene06941:CDS |
| TCGATGGATATTATCAGATG+GGG | 0.674719 | 3.1:+73243543 | MS.gene06941:CDS |
| ACGGACAGGAGGTTGGCGAA+GGG | 0.679588 | 3.1:-73244251 | None:intergenic |
| CCAACTAGTACACGGACAGG+AGG | 0.684433 | 3.1:-73244262 | None:intergenic |
| GATTTCATACCCGTCCACCA+AGG | 0.686883 | 3.1:-73239459 | None:intergenic |
| GCAAATCTCCAACTAGTACA+CGG | 0.688715 | 3.1:-73244270 | None:intergenic |
| CAGATGCTTGATAGGAACTG+GGG | 0.692383 | 3.1:+73243082 | MS.gene06941:intron |
| GATTGTCCAGCGAAACGCAG+GGG | 0.700725 | 3.1:-73239247 | None:intergenic |
| TGATTGTCCAGCGAAACGCA+GGG | 0.710536 | 3.1:-73239248 | None:intergenic |
| GCGGAATGAGAGCCTCTCTG+AGG | 0.711146 | 3.1:-73244476 | None:intergenic |
| TTCATTTATCCTAGTCCACG+GGG | 0.719519 | 3.1:+73239937 | MS.gene06941:CDS |
| AGCAAGACAATACCTCAGAG+AGG | 0.731039 | 3.1:+73244464 | MS.gene06941:CDS |
| CATATGGAGAGTTTCTGCCG+AGG | 0.733805 | 3.1:-73242946 | None:intergenic |
| GTAGGAGAAGACACAACTGG+AGG | 0.772677 | 3.1:+73240204 | MS.gene06941:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATAAAATAATTTTGAGT+TGG | - | chr3.1:73242129-73242148 | None:intergenic | 10.0% |
| !!! | GTTAATATTGTATTTAATTT+TGG | + | chr3.1:73241506-73241525 | MS.gene06941:intron | 10.0% |
| !! | AAAAGTTATGAAAACAAAAA+TGG | - | chr3.1:73243040-73243059 | None:intergenic | 15.0% |
| !! | AGAAATGTAATAAAATAATG+AGG | - | chr3.1:73242643-73242662 | None:intergenic | 15.0% |
| !! | TGAGAATAATACTAAATTAA+TGG | + | chr3.1:73242540-73242559 | MS.gene06941:intron | 15.0% |
| !!! | ATATTTTTGATGTTATCATA+AGG | + | chr3.1:73242212-73242231 | MS.gene06941:intron | 15.0% |
| !!! | TAAAAGTATAACTTTTTAGA+AGG | + | chr3.1:73241542-73241561 | MS.gene06941:intron | 15.0% |
| !!! | TATTTTTGATGTTATCATAA+GGG | + | chr3.1:73242213-73242232 | MS.gene06941:intron | 15.0% |
| !!! | TCATATTTAATTTATGTTTC+TGG | - | chr3.1:73242014-73242033 | None:intergenic | 15.0% |
| !!! | TCATTATTTTATTACATTTC+TGG | + | chr3.1:73242642-73242661 | MS.gene06941:intron | 15.0% |
| !!! | TGGATTAATTTTTTTAATTC+CGG | + | chr3.1:73239508-73239527 | MS.gene06941:intron | 15.0% |
| !!! | TTTTCAAATTTTCATGATAA+TGG | - | chr3.1:73242494-73242513 | None:intergenic | 15.0% |
| !! | AAAAATCTGATATGAGAAAT+AGG | + | chr3.1:73241755-73241774 | MS.gene06941:intron | 20.0% |
| !! | AAAATCTGATATGAGAAATA+GGG | + | chr3.1:73241756-73241775 | MS.gene06941:intron | 20.0% |
| !! | AAGAATGATACAAAAGTTTA+CGG | - | chr3.1:73239865-73239884 | None:intergenic | 20.0% |
| !! | AATTTATATGTGAATAAGCT+AGG | - | chr3.1:73239201-73239220 | None:intergenic | 20.0% |
| !! | ATATATAAACCATCTTACAA+GGG | - | chr3.1:73241981-73242000 | None:intergenic | 20.0% |
| !! | CAAATGTAACCTTATTATTA+AGG | - | chr3.1:73243739-73243758 | None:intergenic | 20.0% |
| !! | GAAAAAGGAACAAATTATTT+AGG | - | chr3.1:73241664-73241683 | None:intergenic | 20.0% |
| !! | TATATATAAACCATCTTACA+AGG | - | chr3.1:73241982-73242001 | None:intergenic | 20.0% |
| !! | TTGACAAATCAAATATTTCA+GGG | - | chr3.1:73244708-73244727 | None:intergenic | 20.0% |
| !! | TTTGACAAATCAAATATTTC+AGG | - | chr3.1:73244709-73244728 | None:intergenic | 20.0% |
| !!! | AATTCATTACCTTGATATTT+TGG | - | chr3.1:73240790-73240809 | None:intergenic | 20.0% |
| !!! | ATTAAAATTTGTGACTGTTT+TGG | - | chr3.1:73244121-73244140 | None:intergenic | 20.0% |
| !!! | ATTAATTTTTTTAATTCCGG+TGG | + | chr3.1:73239511-73239530 | MS.gene06941:intron | 20.0% |
| !!! | ATTCATTACCTTGATATTTT+GGG | - | chr3.1:73240789-73240808 | None:intergenic | 20.0% |
| !!! | ATTTTAACCTTAATGTTTTC+TGG | + | chr3.1:73240302-73240321 | MS.gene06941:intron | 20.0% |
| !!! | CATTTTAGTGTTATTAATAG+CGG | + | chr3.1:73241709-73241728 | MS.gene06941:intron | 20.0% |
| !!! | CTATGATTATCTTTTAGTAT+TGG | - | chr3.1:73242757-73242776 | None:intergenic | 20.0% |
| !!! | TTATACTTTTAAACAGTCAA+GGG | - | chr3.1:73241533-73241552 | None:intergenic | 20.0% |
| ! | AAATGTCTTATATAAGCACA+AGG | - | chr3.1:73243679-73243698 | None:intergenic | 25.0% |
| ! | AACATATGACATATACTTTC+TGG | + | chr3.1:73241050-73241069 | MS.gene06941:intron | 25.0% |
| ! | ACAATGGTTTATTTACTTTC+AGG | + | chr3.1:73240387-73240406 | MS.gene06941:intron | 25.0% |
| ! | ACCAACAAAATATTGTGAAA+AGG | - | chr3.1:73239813-73239832 | None:intergenic | 25.0% |
| ! | ATAACTCTTGTGTTATACAA+AGG | - | chr3.1:73239688-73239707 | None:intergenic | 25.0% |
| ! | ATAATGGCAAAAATGGTAAT+GGG | + | chr3.1:73241422-73241441 | MS.gene06941:CDS | 25.0% |
| ! | ATATGTCATATGTTAGGTAT+CGG | - | chr3.1:73241044-73241063 | None:intergenic | 25.0% |
| ! | ATCTAATCAAATGCTATTCA+TGG | - | chr3.1:73243401-73243420 | None:intergenic | 25.0% |
| ! | ATCTGCGAGAAAATAATATA+AGG | - | chr3.1:73243067-73243086 | None:intergenic | 25.0% |
| ! | ATGAATAATGGCATATAAGT+TGG | - | chr3.1:73244156-73244175 | None:intergenic | 25.0% |
| ! | ATTCTAACAAATATGTAGAC+AGG | + | chr3.1:73242807-73242826 | MS.gene06941:intron | 25.0% |
| ! | ATTGTAGAAGAAACAATACT+AGG | - | chr3.1:73243933-73243952 | None:intergenic | 25.0% |
| ! | CAACAAAATATTGTGAAAAG+GGG | - | chr3.1:73239811-73239830 | None:intergenic | 25.0% |
| ! | CCAACAAAATATTGTGAAAA+GGG | - | chr3.1:73239812-73239831 | None:intergenic | 25.0% |
| ! | GAAAAGAATTATTACAGAGA+TGG | + | chr3.1:73240810-73240829 | MS.gene06941:intron | 25.0% |
| ! | GAAACAAGTCACAAAATATA+AGG | + | chr3.1:73242720-73242739 | MS.gene06941:intron | 25.0% |
| ! | GCAAAATCACAATAACATAT+CGG | + | chr3.1:73242320-73242339 | MS.gene06941:intron | 25.0% |
| ! | TAACTCTTGTGTTATACAAA+GGG | - | chr3.1:73239687-73239706 | None:intergenic | 25.0% |
| ! | TATAATGGCAAAAATGGTAA+TGG | + | chr3.1:73241421-73241440 | MS.gene06941:CDS | 25.0% |
| ! | TATTATTAAGGAAAAACTCG+AGG | - | chr3.1:73243727-73243746 | None:intergenic | 25.0% |
| ! | TGACAAATCAAATATTTCAG+GGG | - | chr3.1:73244707-73244726 | None:intergenic | 25.0% |
| !! | AACTGTATTTAGCACATTTT+TGG | + | chr3.1:73241005-73241024 | MS.gene06941:intron | 25.0% |
| !! | ACTGTATTTAGCACATTTTT+GGG | + | chr3.1:73241006-73241025 | MS.gene06941:intron | 25.0% |
| !! | AGCGATTATTTCTTACATAT+CGG | - | chr3.1:73242261-73242280 | None:intergenic | 25.0% |
| !! | ATATTTTGTTGGTATCTTCA+AGG | + | chr3.1:73239820-73239839 | MS.gene06941:intron | 25.0% |
| !! | CGAGTTTTTCCTTAATAATA+AGG | + | chr3.1:73243727-73243746 | MS.gene06941:intron | 25.0% |
| !! | GAAAGTATATGTCATATGTT+AGG | - | chr3.1:73241050-73241069 | None:intergenic | 25.0% |
| !! | GTTATACTTTTAAACAGTCA+AGG | - | chr3.1:73241534-73241553 | None:intergenic | 25.0% |
| !! | TATACTTTTAAACAGTCAAG+GGG | - | chr3.1:73241532-73241551 | None:intergenic | 25.0% |
| !! | TTTTACTCATGAATTACCTT+TGG | - | chr3.1:73243892-73243911 | None:intergenic | 25.0% |
| !!! | AGAAATTTTCTAGCAAGAAA+TGG | + | chr3.1:73244527-73244546 | MS.gene06941:CDS | 25.0% |
| !!! | ATGAAGTGTTGTTAAATAAC+CGG | - | chr3.1:73242454-73242473 | None:intergenic | 25.0% |
| !!! | GTATCAATGTTTTGATCTAA+AGG | - | chr3.1:73244646-73244665 | None:intergenic | 25.0% |
| !!! | GTTTGTTATATTTGCTGATA+TGG | - | chr3.1:73240988-73241007 | None:intergenic | 25.0% |
| !!! | TCATTTTTCTGTCTTTTATG+TGG | + | chr3.1:73240538-73240557 | MS.gene06941:intron | 25.0% |
| AAATTAATGGTTAAGTCACG+TGG | + | chr3.1:73242553-73242572 | MS.gene06941:intron | 30.0% | |
| AACAACACTTCATTTATAGC+AGG | + | chr3.1:73242461-73242480 | MS.gene06941:intron | 30.0% | |
| AAGATAAACAGCTCAATGTA+GGG | - | chr3.1:73243222-73243241 | None:intergenic | 30.0% | |
| AAGTAAACTACTACAGATCA+TGG | - | chr3.1:73242579-73242598 | None:intergenic | 30.0% | |
| AAGTTCACAATTAATCCAAC+TGG | + | chr3.1:73244079-73244098 | MS.gene06941:intron | 30.0% | |
| AATATGCCTCATACAAACTA+AGG | + | chr3.1:73241638-73241657 | MS.gene06941:intron | 30.0% | |
| ACTTTGATATGTCTGTCTAT+TGG | - | chr3.1:73240478-73240497 | None:intergenic | 30.0% | |
| ATAGTTACCCTAACAAATGT+AGG | + | chr3.1:73242773-73242792 | MS.gene06941:intron | 30.0% | |
| ATGATCTGTAGTAGTTTACT+TGG | + | chr3.1:73242578-73242597 | MS.gene06941:intron | 30.0% | |
| ATGTCTTCCAGAAAACATTA+AGG | - | chr3.1:73240312-73240331 | None:intergenic | 30.0% | |
| CACATATAAATTTGTCGACA+AGG | + | chr3.1:73239209-73239228 | MS.gene06941:CDS | 30.0% | |
| CTAATTAACCTCTAACATGT+AGG | - | chr3.1:73241886-73241905 | None:intergenic | 30.0% | |
| CTGATAATTCAAATTACACG+TGG | + | chr3.1:73242698-73242717 | MS.gene06941:intron | 30.0% | |
| CTTCATTTATACTAAGAGCT+GGG | + | chr3.1:73244425-73244444 | MS.gene06941:CDS | 30.0% | |
| CTTTGATATGTCTGTCTATT+GGG | - | chr3.1:73240477-73240496 | None:intergenic | 30.0% | |
| GACAAATCAAATATTTCAGG+GGG | - | chr3.1:73244706-73244725 | None:intergenic | 30.0% | |
| GGAAAATGACAGTTATATGA+AGG | - | chr3.1:73240952-73240971 | None:intergenic | 30.0% | |
| GTTCAAAATGTCAGACTTTA+AGG | + | chr3.1:73239414-73239433 | MS.gene06941:CDS | 30.0% | |
| TAATATGCAGTTCTTCACTA+CGG | + | chr3.1:73239299-73239318 | MS.gene06941:CDS | 30.0% | |
| TAGTAGAGAATCAAAGTTGA+AGG | + | chr3.1:73244303-73244322 | MS.gene06941:CDS | 30.0% | |
| TATGTCATATGTTAGGTATC+GGG | - | chr3.1:73241043-73241062 | None:intergenic | 30.0% | |
| TATTTATTTCAACCGCTTTG+TGG | - | chr3.1:73241809-73241828 | None:intergenic | 30.0% | |
| TCAACATACCTACATTTGTT+AGG | - | chr3.1:73242784-73242803 | None:intergenic | 30.0% | |
| TCTTCATTTATACTAAGAGC+TGG | + | chr3.1:73244424-73244443 | MS.gene06941:CDS | 30.0% | |
| TGAAATGTTCTACAGTTGTT+TGG | + | chr3.1:73243470-73243489 | MS.gene06941:intron | 30.0% | |
| TGATAGAACCCAAAATATCA+AGG | + | chr3.1:73240778-73240797 | MS.gene06941:intron | 30.0% | |
| TGATCTGTAGTAGTTTACTT+GGG | + | chr3.1:73242579-73242598 | MS.gene06941:intron | 30.0% | |
| TTATTCAGTTAGAAACCACA+TGG | - | chr3.1:73240898-73240917 | None:intergenic | 30.0% | |
| TTGAACTTTGCGAATATCAA+AGG | - | chr3.1:73241461-73241480 | None:intergenic | 30.0% | |
| TTGATGAGAGATCTTCTAAT+TGG | + | chr3.1:73240264-73240283 | MS.gene06941:CDS | 30.0% | |
| TTGCTAGCAATAGAGATAAA+AGG | - | chr3.1:73243120-73243139 | None:intergenic | 30.0% | |
| ! | ACATTTTCCTTTCAGTATCA+TGG | + | chr3.1:73240090-73240109 | MS.gene06941:intron | 30.0% |
| ! | AGGAGTGATATTTTCTACAA+TGG | + | chr3.1:73240371-73240390 | MS.gene06941:intron | 30.0% |
| ! | AGTGGTTCTTTTTATGCAAA+GGG | - | chr3.1:73240050-73240069 | None:intergenic | 30.0% |
| ! | CAACATACCTACATTTGTTA+GGG | - | chr3.1:73242783-73242802 | None:intergenic | 30.0% |
| ! | CCCTTTTCACAATATTTTGT+TGG | + | chr3.1:73239809-73239828 | MS.gene06941:intron | 30.0% |
| ! | CTTATCAGGTTTTCTATCTT+AGG | - | chr3.1:73240710-73240729 | None:intergenic | 30.0% |
| ! | TCTAACATGTAGGTTTTTGA+GGG | - | chr3.1:73241876-73241895 | None:intergenic | 30.0% |
| ! | TGTTGCTAGTTTGAACATTT+CGG | + | chr3.1:73240657-73240676 | MS.gene06941:intron | 30.0% |
| !! | AAGATGCATGGGTTTTATAA+TGG | + | chr3.1:73241406-73241425 | MS.gene06941:intron | 30.0% |
| !! | CATCGATTAAGTTTTGCTAT+AGG | + | chr3.1:73239537-73239556 | MS.gene06941:intron | 30.0% |
| !! | GGGTTTTATAATGGCAAAAA+TGG | + | chr3.1:73241415-73241434 | MS.gene06941:CDS | 30.0% |
| !!! | ATAATTTTGAGTTGGTGATG+AGG | - | chr3.1:73242121-73242140 | None:intergenic | 30.0% |
| !!! | GTTTTGGTGATTGTTTTAAC+TGG | - | chr3.1:73244105-73244124 | None:intergenic | 30.0% |
| AAAACTGCCATGATACTGAA+AGG | - | chr3.1:73240100-73240119 | None:intergenic | 35.0% | |
| AAAGAATGGTTTAGGCTCTT+GGG | - | chr3.1:73244010-73244029 | None:intergenic | 35.0% | |
| AAATAGACAACATTCAGAGC+AGG | - | chr3.1:73240015-73240034 | None:intergenic | 35.0% | |
| AAATGCTTTATAGACCGTGA+AGG | + | chr3.1:73241587-73241606 | MS.gene06941:intron | 35.0% | |
| AACCGATTGTCTTAGATGTA+AGG | + | chr3.1:73241950-73241969 | MS.gene06941:intron | 35.0% | |
| AACTCATCATGTAACCTGAA+CGG | - | chr3.1:73239623-73239642 | None:intergenic | 35.0% | |
| AACTTCACAAACGATATCCT+AGG | - | chr3.1:73241339-73241358 | None:intergenic | 35.0% | |
| AATCATTCCTCACAAAGGTA+TGG | + | chr3.1:73241480-73241499 | MS.gene06941:intron | 35.0% | |
| ACCGATTGTCTTAGATGTAA+GGG | + | chr3.1:73241951-73241970 | MS.gene06941:intron | 35.0% | |
| ACCTGTTAAGTAAACACTTC+AGG | - | chr3.1:73241208-73241227 | None:intergenic | 35.0% | |
| ACTTGGGAAAGACTATTTGT+AGG | + | chr3.1:73242595-73242614 | MS.gene06941:intron | 35.0% | |
| AGAGAAATGTCTCTTCTCTA+AGG | - | chr3.1:73240864-73240883 | None:intergenic | 35.0% | |
| AGATAAACAGCTCAATGTAG+GGG | - | chr3.1:73243221-73243240 | None:intergenic | 35.0% | |
| AGATAATTCTTTGTCCGTTC+AGG | + | chr3.1:73239606-73239625 | MS.gene06941:intron | 35.0% | |
| AGGACATTACTCTCCAAAAT+CGG | - | chr3.1:73239181-73239200 | None:intergenic | 35.0% | |
| AGTTACTGTACACCAATAGT+TGG | + | chr3.1:73241132-73241151 | MS.gene06941:intron | 35.0% | |
| AGTTAGAAACCACATGGTTT+GGG | - | chr3.1:73240892-73240911 | None:intergenic | 35.0% | |
| ATCTGATAATATCCATCGAC+GGG | - | chr3.1:73243542-73243561 | None:intergenic | 35.0% | |
| ATCTGTGTTACAAAGATGCA+TGG | + | chr3.1:73241394-73241413 | MS.gene06941:intron | 35.0% | |
| ATGACAGTTATATGAAGGAC+AGG | - | chr3.1:73240947-73240966 | None:intergenic | 35.0% | |
| ATTATTCATGTGTCCAGAAC+TGG | + | chr3.1:73244167-73244186 | MS.gene06941:intron | 35.0% | |
| ATTGCATTTGACATGAGGTA+TGG | + | chr3.1:73241313-73241332 | MS.gene06941:intron | 35.0% | |
| ATTGGATTCTCAGTCATGAT+TGG | + | chr3.1:73244349-73244368 | MS.gene06941:CDS | 35.0% | |
| ATTTGTAGGTCTACTGTAAG+TGG | + | chr3.1:73242609-73242628 | MS.gene06941:intron | 35.0% | |
| CAACTGTAGAACATTTCACA+TGG | - | chr3.1:73243468-73243487 | None:intergenic | 35.0% | |
| CAAGATAAACAGCTCAATGT+AGG | - | chr3.1:73243223-73243242 | None:intergenic | 35.0% | |
| CATCTGATAATATCCATCGA+CGG | - | chr3.1:73243543-73243562 | None:intergenic | 35.0% | |
| CATGTTAGAGGTTAATTAGC+AGG | + | chr3.1:73241887-73241906 | MS.gene06941:intron | 35.0% | |
| CCACAAAAGACCTTGTAAAT+AGG | - | chr3.1:73244798-73244817 | None:intergenic | 35.0% | |
| CTCAAAAACCTACATGTTAG+AGG | + | chr3.1:73241875-73241894 | MS.gene06941:intron | 35.0% | |
| CTCCAATAAGTCAATGAAGT+GGG | - | chr3.1:73243848-73243867 | None:intergenic | 35.0% | |
| GAAGTGAAGAGAAAAGATAG+AGG | + | chr3.1:73242039-73242058 | MS.gene06941:intron | 35.0% | |
| GAGAAAAATAACCCCTTTCA+AGG | + | chr3.1:73244549-73244568 | MS.gene06941:CDS | 35.0% | |
| GATTTGTCAAAGATTGTGTG+TGG | + | chr3.1:73244718-73244737 | MS.gene06941:CDS | 35.0% | |
| GTCGATGGATATTATCAGAT+GGG | + | chr3.1:73243542-73243561 | MS.gene06941:CDS | 35.0% | |
| GTGTACTTCAAACGTAAGTT+GGG | + | chr3.1:73242829-73242848 | MS.gene06941:intron | 35.0% | |
| GTTAATTACCTGCATAGTCA+TGG | + | chr3.1:73240409-73240428 | MS.gene06941:CDS | 35.0% | |
| GTTCAAATCATTCCTCACAA+AGG | + | chr3.1:73241475-73241494 | MS.gene06941:CDS | 35.0% | |
| TCGATGGATATTATCAGATG+GGG | + | chr3.1:73243543-73243562 | MS.gene06941:CDS | 35.0% | |
| TCTCCAATAAGTCAATGAAG+TGG | - | chr3.1:73243849-73243868 | None:intergenic | 35.0% | |
| TCTGTGTTACAAAGATGCAT+GGG | + | chr3.1:73241395-73241414 | MS.gene06941:intron | 35.0% | |
| TCTTACTCAATGCAAGTTCA+TGG | + | chr3.1:73239881-73239900 | MS.gene06941:CDS | 35.0% | |
| TCTTGCCACATTAAACTTCA+GGG | + | chr3.1:73242884-73242903 | MS.gene06941:intron | 35.0% | |
| TGATGATTGCATTTGACATG+AGG | + | chr3.1:73241308-73241327 | MS.gene06941:CDS | 35.0% | |
| TGATGTACAAAACCTTCTCT+GGG | - | chr3.1:73240592-73240611 | None:intergenic | 35.0% | |
| TGCAAGTATTCAAGCACTTA+TGG | - | chr3.1:73240341-73240360 | None:intergenic | 35.0% | |
| TTCTTGCCACATTAAACTTC+AGG | + | chr3.1:73242883-73242902 | MS.gene06941:intron | 35.0% | |
| TTGATGGAAACTCCTTGAAA+GGG | - | chr3.1:73244564-73244583 | None:intergenic | 35.0% | |
| TTTATATAACCCCACAACCT+AGG | - | chr3.1:73242092-73242111 | None:intergenic | 35.0% | |
| ! | ACCCTTACATCTAAGACAAT+CGG | - | chr3.1:73241955-73241974 | None:intergenic | 35.0% |
| ! | ACCTGAAGTGTTTACTTAAC+AGG | + | chr3.1:73241204-73241223 | MS.gene06941:intron | 35.0% |
| ! | AGAACCACTGATGTTCTTTT+TGG | + | chr3.1:73240061-73240080 | MS.gene06941:intron | 35.0% |
| ! | AGCAGTGACTTTTTGCATAT+CGG | - | chr3.1:73242288-73242307 | None:intergenic | 35.0% |
| ! | CAGTGGTTCTTTTTATGCAA+AGG | - | chr3.1:73240051-73240070 | None:intergenic | 35.0% |
| ! | CCTATTTACAAGGTCTTTTG+TGG | + | chr3.1:73244795-73244814 | MS.gene06941:CDS | 35.0% |
| ! | CTCTAACATGTAGGTTTTTG+AGG | - | chr3.1:73241877-73241896 | None:intergenic | 35.0% |
| ! | GAAGTGTTTACTTAACAGGT+CGG | + | chr3.1:73241208-73241227 | MS.gene06941:intron | 35.0% |
| ! | GTCTATAAAGCATTTGAGTC+AGG | - | chr3.1:73241582-73241601 | None:intergenic | 35.0% |
| ! | GTGGTTCTTTTTATGCAAAG+GGG | - | chr3.1:73240049-73240068 | None:intergenic | 35.0% |
| ! | TCAAGTTTCTTTGGTCTTTC+AGG | + | chr3.1:73243328-73243347 | MS.gene06941:intron | 35.0% |
| ! | TCATGAATTACCTTTGGCTT+TGG | - | chr3.1:73243886-73243905 | None:intergenic | 35.0% |
| !! | AGATTGGCTTCAAACTTTAG+AGG | + | chr3.1:73240146-73240165 | MS.gene06941:CDS | 35.0% |
| !! | AGTTCTGGACACATGAATAA+TGG | - | chr3.1:73244168-73244187 | None:intergenic | 35.0% |
| !! | CGATTAAGTTTTGCTATAGG+CGG | + | chr3.1:73239540-73239559 | MS.gene06941:intron | 35.0% |
| !! | GAGAAGTGTTCAAGTTTCTT+TGG | + | chr3.1:73243319-73243338 | MS.gene06941:intron | 35.0% |
| !! | GTTTTAGATCGTGTTAGCAT+TGG | + | chr3.1:73239436-73239455 | MS.gene06941:CDS | 35.0% |
| !! | TTCAAGGTATTGAAGAAGCT+GGG | + | chr3.1:73239836-73239855 | MS.gene06941:intron | 35.0% |
| !! | TTTAGCACATTTTTGGGCTT+AGG | + | chr3.1:73241012-73241031 | MS.gene06941:intron | 35.0% |
| !! | TTTAGGCCTTAGTTTGTATG+AGG | - | chr3.1:73241647-73241666 | None:intergenic | 35.0% |
| !!! | AACTTTTGCTCTGGGATTAT+AGG | - | chr3.1:73240841-73240860 | None:intergenic | 35.0% |
| !!! | ACTTTTGCTCTGGGATTATA+GGG | - | chr3.1:73240840-73240859 | None:intergenic | 35.0% |
| !!! | TTCTGGTTGATGATTTTCAC+CGG | + | chr3.1:73241067-73241086 | MS.gene06941:intron | 35.0% |
| !!! | TTTCTATGTTTTAGCGCAGT+AGG | + | chr3.1:73243818-73243837 | MS.gene06941:intron | 35.0% |
| AAAAGTCACTGCTATTGCAG+TGG | + | chr3.1:73242295-73242314 | MS.gene06941:intron | 40.0% | |
| AAATAGCAGTAGCCACAAAG+CGG | + | chr3.1:73241794-73241813 | MS.gene06941:intron | 40.0% | |
| AACTCTCCATATGGAAATGC+TGG | + | chr3.1:73242956-73242975 | MS.gene06941:CDS | 40.0% | |
| AACTTAATCGATGAGACCAC+CGG | - | chr3.1:73239530-73239549 | None:intergenic | 40.0% | |
| AAGAGAAAAGATAGAGGCAG+AGG | + | chr3.1:73242045-73242064 | MS.gene06941:intron | 40.0% | |
| AATACTTGCACAGCAACATG+AGG | + | chr3.1:73240351-73240370 | MS.gene06941:intron | 40.0% | |
| AATATCACCCGAAGCAAACT+TGG | - | chr3.1:73244599-73244618 | None:intergenic | 40.0% | |
| ACAAAGCTGGTAAAAGAGGA+AGG | + | chr3.1:73244389-73244408 | MS.gene06941:CDS | 40.0% | |
| ACAGAAACACATTGCGTGTA+TGG | - | chr3.1:73243643-73243662 | None:intergenic | 40.0% | |
| ACAGTTGTTTGGATGCTCTA+AGG | + | chr3.1:73243481-73243500 | MS.gene06941:intron | 40.0% | |
| ACTTTACGATGTGTCATGAC+TGG | + | chr3.1:73239488-73239507 | MS.gene06941:intron | 40.0% | |
| AGAGCTAAGAATTATCAGCC+CGG | - | chr3.1:73241089-73241108 | None:intergenic | 40.0% | |
| AGCCATGGAAAGAATGGTTT+AGG | - | chr3.1:73244018-73244037 | None:intergenic | 40.0% | |
| AGCCTAAACCATTCTTTCCA+TGG | + | chr3.1:73244013-73244032 | MS.gene06941:intron | 40.0% | |
| AGGAAACGGATCATGTTATG+AGG | + | chr3.1:73239392-73239411 | MS.gene06941:CDS | 40.0% | |
| AGTCTGTTGCACTTCTTATC+AGG | - | chr3.1:73240724-73240743 | None:intergenic | 40.0% | |
| ATAAGCTGTCGCAAACATGA+AGG | - | chr3.1:73242917-73242936 | None:intergenic | 40.0% | |
| ATACTCACAGCTTACAGCAA+AGG | - | chr3.1:73241688-73241707 | None:intergenic | 40.0% | |
| ATCTGCATCTGCTTCTTCAA+TGG | + | chr3.1:73239324-73239343 | MS.gene06941:CDS | 40.0% | |
| ATGTTTGCGACAGCTTATGA+TGG | + | chr3.1:73242919-73242938 | MS.gene06941:CDS | 40.0% | |
| ATTGACAGCCATGGAAAGAA+TGG | - | chr3.1:73244024-73244043 | None:intergenic | 40.0% | |
| CAAACCAAGCATGAGAAGAA+AGG | - | chr3.1:73241184-73241203 | None:intergenic | 40.0% | |
| CAAAGCTGGTAAAAGAGGAA+GGG | + | chr3.1:73244390-73244409 | MS.gene06941:CDS | 40.0% | |
| CAAATCCCGAGATGTAATAG+CGG | + | chr3.1:73242361-73242380 | MS.gene06941:intron | 40.0% | |
| CAGAAACACATTGCGTGTAT+GGG | - | chr3.1:73243642-73243661 | None:intergenic | 40.0% | |
| CAGTTAGAAACCACATGGTT+TGG | - | chr3.1:73240893-73240912 | None:intergenic | 40.0% | |
| CATGACAAAGCTGGTAAAAG+AGG | + | chr3.1:73244385-73244404 | MS.gene06941:CDS | 40.0% | |
| CATGAGGAAACACCAACTAT+TGG | - | chr3.1:73241147-73241166 | None:intergenic | 40.0% | |
| CATTCCCCTGAAGTTTAATG+TGG | - | chr3.1:73242892-73242911 | None:intergenic | 40.0% | |
| CCTATACCGCTATTACATCT+CGG | - | chr3.1:73242370-73242389 | None:intergenic | 40.0% | |
| CGAGATGTAATAGCGGTATA+GGG | + | chr3.1:73242368-73242387 | MS.gene06941:intron | 40.0% | |
| CGTCGATGGATATTATCAGA+TGG | + | chr3.1:73243541-73243560 | MS.gene06941:CDS | 40.0% | |
| CTATACCGCTATTACATCTC+GGG | - | chr3.1:73242369-73242388 | None:intergenic | 40.0% | |
| CTTGATGGAAACTCCTTGAA+AGG | - | chr3.1:73244565-73244584 | None:intergenic | 40.0% | |
| CTTGCCACATTAAACTTCAG+GGG | + | chr3.1:73242885-73242904 | MS.gene06941:intron | 40.0% | |
| GAAAGAATGGTTTAGGCTCT+TGG | - | chr3.1:73244011-73244030 | None:intergenic | 40.0% | |
| GAAGAATCTGTTAGGAAGGT+AGG | + | chr3.1:73240186-73240205 | MS.gene06941:CDS | 40.0% | |
| GAGATGTAATAGCGGTATAG+GGG | + | chr3.1:73242369-73242388 | MS.gene06941:intron | 40.0% | |
| GAGGCATATTAGAGACAAGA+AGG | - | chr3.1:73241628-73241647 | None:intergenic | 40.0% | |
| GATATTATCAGATGGGGTCT+AGG | + | chr3.1:73243549-73243568 | MS.gene06941:CDS | 40.0% | |
| GATCAGCTCTCCTATTTACA+AGG | + | chr3.1:73244785-73244804 | MS.gene06941:CDS | 40.0% | |
| GATTGTGTGTGGAACTTATG+TGG | + | chr3.1:73244729-73244748 | MS.gene06941:CDS | 40.0% | |
| GCAAATCTCCAACTAGTACA+CGG | - | chr3.1:73244273-73244292 | None:intergenic | 40.0% | |
| GGACATTACTCTCCAAAATC+GGG | - | chr3.1:73239180-73239199 | None:intergenic | 40.0% | |
| GGTGTACTTCAAACGTAAGT+TGG | + | chr3.1:73242828-73242847 | MS.gene06941:intron | 40.0% | |
| GGTTCATTTATCCTAGTCCA+CGG | + | chr3.1:73239935-73239954 | MS.gene06941:CDS | 40.0% | |
| GTGATGTACAAAACCTTCTC+TGG | - | chr3.1:73240593-73240612 | None:intergenic | 40.0% | |
| GTTCATTTATCCTAGTCCAC+GGG | + | chr3.1:73239936-73239955 | MS.gene06941:CDS | 40.0% | |
| TACTCACAGCTTACAGCAAA+GGG | - | chr3.1:73241687-73241706 | None:intergenic | 40.0% | |
| TAGAGGCTCTATGGAAAACA+TGG | + | chr3.1:73241273-73241292 | MS.gene06941:CDS | 40.0% | |
| TCAACCTTTCTTCTCATGCT+TGG | + | chr3.1:73241177-73241196 | MS.gene06941:intron | 40.0% | |
| TCGCAATTGCCTAGAAATTG+CGG | - | chr3.1:73240232-73240251 | None:intergenic | 40.0% | |
| TGAGCCAAAAAGAACATCAG+TGG | - | chr3.1:73240068-73240087 | None:intergenic | 40.0% | |
| TGATGGAAACTCCTTGAAAG+GGG | - | chr3.1:73244563-73244582 | None:intergenic | 40.0% | |
| TGGTTCAAATAGAGGCTCTA+TGG | + | chr3.1:73241264-73241283 | MS.gene06941:CDS | 40.0% | |
| TGTAAGCCAGCATTTCCATA+TGG | - | chr3.1:73242965-73242984 | None:intergenic | 40.0% | |
| TTACTCTCCAAAATCGGGTA+TGG | - | chr3.1:73239175-73239194 | None:intergenic | 40.0% | |
| TTAGTGATGAGAGGTTACCT+AGG | + | chr3.1:73242072-73242091 | MS.gene06941:intron | 40.0% | |
| TTATACTAAGAGCTGGGAGA+CGG | + | chr3.1:73244431-73244450 | MS.gene06941:CDS | 40.0% | |
| TTCATTTATCCTAGTCCACG+GGG | + | chr3.1:73239937-73239956 | MS.gene06941:CDS | 40.0% | |
| ! | AGTTTCTTTGGTCTTTCAGG+AGG | + | chr3.1:73243331-73243350 | MS.gene06941:intron | 40.0% |
| ! | ATTCTCAGTCATGATTGGTC+AGG | + | chr3.1:73244354-73244373 | MS.gene06941:CDS | 40.0% |
| ! | CAGCTTATGATGGAAATCCT+CGG | + | chr3.1:73242929-73242948 | MS.gene06941:CDS | 40.0% |
| ! | TAACTTGCCATACCTTTGTG+AGG | - | chr3.1:73241490-73241509 | None:intergenic | 40.0% |
| ! | TAAGAAGTGCAACAGACTGT+AGG | + | chr3.1:73240726-73240745 | MS.gene06941:intron | 40.0% |
| ! | TCTGTCTTTTATGTGGAGTG+TGG | + | chr3.1:73240545-73240564 | MS.gene06941:intron | 40.0% |
| ! | TTTTCTCGCAGATGCTTGAT+AGG | + | chr3.1:73243074-73243093 | MS.gene06941:intron | 40.0% |
| !! | AATGGTAATGGGAGAGCTTA+TGG | + | chr3.1:73241433-73241452 | MS.gene06941:CDS | 40.0% |
| !! | ATTACCTTTGGCTTTGGATG+AGG | - | chr3.1:73243880-73243899 | None:intergenic | 40.0% |
| !! | CTCTAAGGAACTTTTGCTCT+GGG | - | chr3.1:73240849-73240868 | None:intergenic | 40.0% |
| !! | CTTCAAGGTATTGAAGAAGC+TGG | + | chr3.1:73239835-73239854 | MS.gene06941:intron | 40.0% |
| !! | CTTTTACCAGCTTTGTCATG+AGG | - | chr3.1:73244385-73244404 | None:intergenic | 40.0% |
| !! | GTGTTATTAATAGCGGATCG+CGG | + | chr3.1:73241716-73241735 | MS.gene06941:intron | 40.0% |
| !! | TCTCTAAGGAACTTTTGCTC+TGG | - | chr3.1:73240850-73240869 | None:intergenic | 40.0% |
| !! | TGATATGGCTAGTTTCTTGG+AGG | - | chr3.1:73240973-73240992 | None:intergenic | 40.0% |
| !! | TGCCCACTTCATTGACTTAT+TGG | + | chr3.1:73243843-73243862 | MS.gene06941:CDS | 40.0% |
| !! | TGCTGATATGGCTAGTTTCT+TGG | - | chr3.1:73240976-73240995 | None:intergenic | 40.0% |
| !!! | GATTGTTTTAACTGGCCAGT+TGG | - | chr3.1:73244097-73244116 | None:intergenic | 40.0% |
| !!! | GCAGTTTTTCTTTGAGACAC+TGG | + | chr3.1:73240112-73240131 | MS.gene06941:CDS | 40.0% |
| !!! | TCTGGTTGATGATTTTCACC+GGG | + | chr3.1:73241068-73241087 | MS.gene06941:intron | 40.0% |
| AAAGACCTCTTCCGTTTGCA+TGG | + | chr3.1:73239366-73239385 | MS.gene06941:CDS | 45.0% | |
| AAGGGTCAACCCTTGTAAGA+TGG | + | chr3.1:73241969-73241988 | MS.gene06941:intron | 45.0% | |
| AAGGTAGGAGAAGACACAAC+TGG | + | chr3.1:73240201-73240220 | MS.gene06941:CDS | 45.0% | |
| AAGTGCAACAGACTGTAGGA+AGG | + | chr3.1:73240730-73240749 | MS.gene06941:intron | 45.0% | |
| ACTCACAGCTTACAGCAAAG+GGG | - | chr3.1:73241686-73241705 | None:intergenic | 45.0% | |
| ACTTAACAGGTCGGTACACT+GGG | + | chr3.1:73241217-73241236 | MS.gene06941:intron | 45.0% | |
| AGAAAAGATAGAGGCAGAGG+CGG | + | chr3.1:73242048-73242067 | MS.gene06941:intron | 45.0% | |
| AGCAAGACAATACCTCAGAG+AGG | + | chr3.1:73244464-73244483 | MS.gene06941:CDS | 45.0% | |
| AGGACAGGTGTAGCAAAAGA+AGG | - | chr3.1:73240932-73240951 | None:intergenic | 45.0% | |
| AGTGCAACAGACTGTAGGAA+GGG | + | chr3.1:73240731-73240750 | MS.gene06941:intron | 45.0% | |
| ATCTTGGCCCACAAAGGAAT+GGG | - | chr3.1:73243509-73243528 | None:intergenic | 45.0% | |
| ATGAGAGGTTACCTAGGTTG+TGG | + | chr3.1:73242078-73242097 | MS.gene06941:intron | 45.0% | |
| ATGCAAACGGAAGAGGTCTT+TGG | - | chr3.1:73239367-73239386 | None:intergenic | 45.0% | |
| ATGCATAGCGTTCGACTGAT+GGG | + | chr3.1:73243792-73243811 | MS.gene06941:intron | 45.0% | |
| CAATGTCAGAGACGAAGGAA+AGG | - | chr3.1:73244333-73244352 | None:intergenic | 45.0% | |
| CACTGCAATGCGTATTAGTG+AGG | + | chr3.1:73243575-73243594 | MS.gene06941:CDS | 45.0% | |
| CACTGGACGAAGAATCTGTT+AGG | + | chr3.1:73240178-73240197 | MS.gene06941:CDS | 45.0% | |
| CAGATGCTTGATAGGAACTG+GGG | + | chr3.1:73243082-73243101 | MS.gene06941:intron | 45.0% | |
| CATGAGAAGAAAGGTTGACC+AGG | - | chr3.1:73241175-73241194 | None:intergenic | 45.0% | |
| CCAAACCTTCTCGGAGAATA+AGG | + | chr3.1:73243140-73243159 | MS.gene06941:CDS | 45.0% | |
| CCGAGATGTAATAGCGGTAT+AGG | + | chr3.1:73242367-73242386 | MS.gene06941:intron | 45.0% | |
| CCTTATTCTCCGAGAAGGTT+TGG | - | chr3.1:73243143-73243162 | None:intergenic | 45.0% | |
| CGCAATTGCCTAGAAATTGC+GGG | - | chr3.1:73240231-73240250 | None:intergenic | 45.0% | |
| CGCTATTACATCTCGGGATT+TGG | - | chr3.1:73242363-73242382 | None:intergenic | 45.0% | |
| CTACGCATCTTCAGTGAAAG+TGG | + | chr3.1:73242998-73243017 | MS.gene06941:intron | 45.0% | |
| CTTTCCTTCGTCTCTGACAT+TGG | + | chr3.1:73244331-73244350 | MS.gene06941:CDS | 45.0% | |
| GAATCCAATGTCAGAGACGA+AGG | - | chr3.1:73244338-73244357 | None:intergenic | 45.0% | |
| GAATCCTCATCCAAAGCCAA+AGG | + | chr3.1:73243873-73243892 | MS.gene06941:CDS | 45.0% | |
| GCAAGGTTAAGGACAGTGTT+AGG | + | chr3.1:73239581-73239600 | MS.gene06941:CDS | 45.0% | |
| GCAGATGCTTGATAGGAACT+GGG | + | chr3.1:73243081-73243100 | MS.gene06941:intron | 45.0% | |
| GCATACCTTATTCTCCGAGA+AGG | - | chr3.1:73243148-73243167 | None:intergenic | 45.0% | |
| GCTCTATGGAAAACATGGAC+AGG | + | chr3.1:73241278-73241297 | MS.gene06941:CDS | 45.0% | |
| GCTGGACAATCATCAAATGC+AGG | + | chr3.1:73239259-73239278 | MS.gene06941:CDS | 45.0% | |
| GCTTACAGCAAAGGGGAAAA+AGG | - | chr3.1:73241679-73241698 | None:intergenic | 45.0% | |
| GGACGAAGAATCTGTTAGGA+AGG | + | chr3.1:73240182-73240201 | MS.gene06941:CDS | 45.0% | |
| GGTGTTTGAAGGCAAGGTTA+AGG | + | chr3.1:73239570-73239589 | MS.gene06941:CDS | 45.0% | |
| GTACATTTATCGTCAGCCTC+AGG | + | chr3.1:73243599-73243618 | MS.gene06941:CDS | 45.0% | |
| GTCTTGTAGATTGACAGCCA+TGG | - | chr3.1:73244033-73244052 | None:intergenic | 45.0% | |
| GTGGAACTTATGTGGACTCA+AGG | + | chr3.1:73244737-73244756 | MS.gene06941:CDS | 45.0% | |
| GTGTTTCCTCATGTATAGCC+TGG | + | chr3.1:73241154-73241173 | MS.gene06941:intron | 45.0% | |
| TACTTAACAGGTCGGTACAC+TGG | + | chr3.1:73241216-73241235 | MS.gene06941:intron | 45.0% | |
| TATATCTCGTTGCCTGCAAG+TGG | + | chr3.1:73239905-73239924 | MS.gene06941:CDS | 45.0% | |
| TATGCATAGCGTTCGACTGA+TGG | + | chr3.1:73243791-73243810 | MS.gene06941:intron | 45.0% | |
| TCGAGGAAAACGAGCAATAG+AGG | + | chr3.1:73239741-73239760 | MS.gene06941:CDS | 45.0% | |
| TGAACCATCCTCGCAAAAGT+CGG | - | chr3.1:73241251-73241270 | None:intergenic | 45.0% | |
| TGAGAGGTTACCTAGGTTGT+GGG | + | chr3.1:73242079-73242098 | MS.gene06941:intron | 45.0% | |
| TGCGAGGATGGTTCAAATAG+AGG | + | chr3.1:73241256-73241275 | MS.gene06941:CDS | 45.0% | |
| TGCTAGCAACCAAACCTTCT+CGG | + | chr3.1:73243131-73243150 | MS.gene06941:CDS | 45.0% | |
| TGTCCTTGGATGAATACCTG+AGG | - | chr3.1:73243618-73243637 | None:intergenic | 45.0% | |
| TTCAATGGAGTCGCATGAAG+AGG | + | chr3.1:73239339-73239358 | MS.gene06941:CDS | 45.0% | |
| TTCCAGCCTCAACTCTGTAT+GGG | - | chr3.1:73240440-73240459 | None:intergenic | 45.0% | |
| TTTCCAGCCTCAACTCTGTA+TGG | - | chr3.1:73240441-73240460 | None:intergenic | 45.0% | |
| TTTGACATGAGGTATGGCCT+AGG | + | chr3.1:73241319-73241338 | MS.gene06941:intron | 45.0% | |
| ! | ACTGGCTTCAACAGTCAGAT+TGG | + | chr3.1:73240130-73240149 | MS.gene06941:CDS | 45.0% |
| ! | TAAGGCACCCATTCCTTTGT+GGG | + | chr3.1:73243499-73243518 | MS.gene06941:CDS | 45.0% |
| !! | AGTTTTGCTATAGGCGGATG+AGG | + | chr3.1:73239546-73239565 | MS.gene06941:intron | 45.0% |
| !! | CATATGTTAGGTATCGGGCT+AGG | - | chr3.1:73241038-73241057 | None:intergenic | 45.0% |
| !! | TACAATAGGCGCCATTTTCC+TGG | - | chr3.1:73244205-73244224 | None:intergenic | 45.0% |
| !! | TTTGAGTTGGTGATGAGGTG+AGG | - | chr3.1:73242116-73242135 | None:intergenic | 45.0% |
| AAGGTTGCTCGTTCTTCGAG+GGG | + | chr3.1:73244756-73244775 | MS.gene06941:CDS | 50.0% | |
| ACACTGAGATACATACCCCG+TGG | - | chr3.1:73239955-73239974 | None:intergenic | 50.0% | |
| AGAGGCGGTTTAGTGATGAG+AGG | + | chr3.1:73242063-73242082 | MS.gene06941:intron | 50.0% | |
| AGATACATACCCCGTGGACT+AGG | - | chr3.1:73239949-73239968 | None:intergenic | 50.0% | |
| AGCTAAAGCCTCCTCATTGC+CGG | - | chr3.1:73244506-73244525 | None:intergenic | 50.0% | |
| ATGATTGTCCAGCGAAACGC+AGG | - | chr3.1:73239252-73239271 | None:intergenic | 50.0% | |
| CAAGGTTGCTCGTTCTTCGA+GGG | + | chr3.1:73244755-73244774 | MS.gene06941:CDS | 50.0% | |
| CAGCCTCAGGTATTCATCCA+AGG | + | chr3.1:73243612-73243631 | MS.gene06941:intron | 50.0% | |
| CAGGAGCTGCACATCTGTTA+GGG | + | chr3.1:73241906-73241925 | MS.gene06941:intron | 50.0% | |
| CATATGGAGAGTTTCTGCCG+AGG | - | chr3.1:73242949-73242968 | None:intergenic | 50.0% | |
| CATCTTGGCCCACAAAGGAA+TGG | - | chr3.1:73243510-73243529 | None:intergenic | 50.0% | |
| CATTCCTTTGTGGGCCAAGA+TGG | + | chr3.1:73243508-73243527 | MS.gene06941:CDS | 50.0% | |
| CGCAGATGCTTGATAGGAAC+TGG | + | chr3.1:73243080-73243099 | MS.gene06941:intron | 50.0% | |
| CGTTTCCTCCTCCATGCAAA+CGG | - | chr3.1:73239380-73239399 | None:intergenic | 50.0% | |
| CGTTTGCATGGAGGAGGAAA+CGG | + | chr3.1:73239378-73239397 | MS.gene06941:CDS | 50.0% | |
| CTCGGCAGAAACTCTCCATA+TGG | + | chr3.1:73242947-73242966 | MS.gene06941:CDS | 50.0% | |
| CTCGTTCTTCGAGGGGTTAA+TGG | + | chr3.1:73244763-73244782 | MS.gene06941:CDS | 50.0% | |
| GAGAGGTTACCTAGGTTGTG+GGG | + | chr3.1:73242080-73242099 | MS.gene06941:intron | 50.0% | |
| GATTTCATACCCGTCCACCA+AGG | - | chr3.1:73239462-73239481 | None:intergenic | 50.0% | |
| GCCTATTGTATTGCACTGGG+AGG | + | chr3.1:73244215-73244234 | MS.gene06941:CDS | 50.0% | |
| GCCTCCCAGTGCAATACAAT+AGG | - | chr3.1:73244219-73244238 | None:intergenic | 50.0% | |
| GGCGCCTATTGTATTGCACT+GGG | + | chr3.1:73244212-73244231 | MS.gene06941:CDS | 50.0% | |
| GGTTGACCAGGCTATACATG+AGG | - | chr3.1:73241163-73241182 | None:intergenic | 50.0% | |
| GTAGGAGAAGACACAACTGG+AGG | + | chr3.1:73240204-73240223 | MS.gene06941:CDS | 50.0% | |
| GTCAGAGACGAAGGAAAGGT+TGG | - | chr3.1:73244329-73244348 | None:intergenic | 50.0% | |
| GTCTTGCCCATACAGAGTTG+AGG | + | chr3.1:73240431-73240450 | MS.gene06941:CDS | 50.0% | |
| TCAAGGTTGCTCGTTCTTCG+AGG | + | chr3.1:73244754-73244773 | MS.gene06941:CDS | 50.0% | |
| TCTCCAACTAGTACACGGAC+AGG | - | chr3.1:73244268-73244287 | None:intergenic | 50.0% | |
| TGAGGTGGTGTTTGAAGGCA+AGG | + | chr3.1:73239564-73239583 | MS.gene06941:CDS | 50.0% | |
| TGATTGTCCAGCGAAACGCA+GGG | - | chr3.1:73239251-73239270 | None:intergenic | 50.0% | |
| TGGAGCTGCTTCCAGGAAAA+TGG | + | chr3.1:73244191-73244210 | MS.gene06941:CDS | 50.0% | |
| TGGCGCCTATTGTATTGCAC+TGG | + | chr3.1:73244211-73244230 | MS.gene06941:CDS | 50.0% | |
| TTCATGTGTCCAGAACTGGC+TGG | + | chr3.1:73244171-73244190 | MS.gene06941:intron | 50.0% | |
| TTCTTCGTCCAGTGCAAGAG+TGG | - | chr3.1:73240172-73240191 | None:intergenic | 50.0% | |
| TTTAGAGGCCACTCTTGCAC+TGG | + | chr3.1:73240161-73240180 | MS.gene06941:CDS | 50.0% | |
| ! | AACTGGGCCATACCCGATTT+TGG | + | chr3.1:73239165-73239184 | MS.gene06941:CDS | 50.0% |
| ! | AGTGTGGATTACCTTGCGGT+TGG | + | chr3.1:73240561-73240580 | MS.gene06941:intron | 50.0% |
| ! | ATTGCACTGGGAGGCATGTT+GGG | + | chr3.1:73244224-73244243 | MS.gene06941:CDS | 50.0% |
| ! | CAGTCATGATTGGTCAGGAC+TGG | + | chr3.1:73244359-73244378 | MS.gene06941:CDS | 50.0% |
| ! | CTAAGGCACCCATTCCTTTG+TGG | + | chr3.1:73243498-73243517 | MS.gene06941:CDS | 50.0% |
| ! | GTGGAGTGTGGATTACCTTG+CGG | + | chr3.1:73240557-73240576 | MS.gene06941:intron | 50.0% |
| ! | TATTGCACTGGGAGGCATGT+TGG | + | chr3.1:73244223-73244242 | MS.gene06941:CDS | 50.0% |
| ! | TGCAGGCAAGAGAAAGCACA+AGG | + | chr3.1:73239276-73239295 | MS.gene06941:CDS | 50.0% |
| ! | TGGTAAAAGAGGAAGGGTGC+AGG | + | chr3.1:73244396-73244415 | MS.gene06941:CDS | 50.0% |
| ! | TTTGCTATAGGCGGATGAGG+TGG | + | chr3.1:73239549-73239568 | MS.gene06941:intron | 50.0% |
| ! | TTTTCCTCGACGCTGAGCTT+GGG | - | chr3.1:73239731-73239750 | None:intergenic | 50.0% |
| !! | AGAGACAAGAAGGCGTCCTT+GGG | - | chr3.1:73241618-73241637 | None:intergenic | 50.0% |
| !! | AGCGGTATAGGGGCACTATA+CGG | + | chr3.1:73242379-73242398 | MS.gene06941:intron | 50.0% |
| !! | GATCGTGTTAGCATTGGCCT+TGG | + | chr3.1:73239442-73239461 | MS.gene06941:CDS | 50.0% |
| !! | TAGAGACAAGAAGGCGTCCT+TGG | - | chr3.1:73241619-73241638 | None:intergenic | 50.0% |
| !! | TTAGCATTGGCCTTGGTGGA+CGG | + | chr3.1:73239449-73239468 | MS.gene06941:CDS | 50.0% |
| AAAGCCTCCTCATTGCCGGA+AGG | - | chr3.1:73244502-73244521 | None:intergenic | 55.0% | |
| AAGCCTCCTCATTGCCGGAA+GGG | - | chr3.1:73244501-73244520 | None:intergenic | 55.0% | |
| ACCATCCTCGCAAAAGTCGG+CGG | - | chr3.1:73241248-73241267 | None:intergenic | 55.0% | |
| ATCTCGTTGCCTGCAAGTGG+TGG | + | chr3.1:73239908-73239927 | MS.gene06941:CDS | 55.0% | |
| CCAACTAGTACACGGACAGG+AGG | - | chr3.1:73244265-73244284 | None:intergenic | 55.0% | |
| CCGAAGCAAACTTGGCTGCA+GGG | - | chr3.1:73244591-73244610 | None:intergenic | 55.0% | |
| CCTCCTGTCCGTGTACTAGT+TGG | + | chr3.1:73244262-73244281 | MS.gene06941:CDS | 55.0% | |
| CTAGTACACGGACAGGAGGT+TGG | - | chr3.1:73244261-73244280 | None:intergenic | 55.0% | |
| CTCCTCCATGCAAACGGAAG+AGG | - | chr3.1:73239374-73239393 | None:intergenic | 55.0% | |
| CTCTCTCTGCCCAAACCATG+TGG | + | chr3.1:73240880-73240899 | MS.gene06941:intron | 55.0% | |
| CTCTTCCGTTTGCATGGAGG+AGG | + | chr3.1:73239372-73239391 | MS.gene06941:CDS | 55.0% | |
| CTGGAGGTCCCGCAATTTCT+AGG | + | chr3.1:73240220-73240239 | MS.gene06941:CDS | 55.0% | |
| CTTGATAGGAACTGGGGTGC+TGG | + | chr3.1:73243088-73243107 | MS.gene06941:CDS | 55.0% | |
| GAACCACTACCACCACTTGC+AGG | - | chr3.1:73239920-73239939 | None:intergenic | 55.0% | |
| GACCTCTTCCGTTTGCATGG+AGG | + | chr3.1:73239369-73239388 | MS.gene06941:CDS | 55.0% | |
| GATTGTCCAGCGAAACGCAG+GGG | - | chr3.1:73239250-73239269 | None:intergenic | 55.0% | |
| GCAGGAGCTGCACATCTGTT+AGG | + | chr3.1:73241905-73241924 | MS.gene06941:intron | 55.0% | |
| GCGGATGAGGTGGTGTTTGA+AGG | + | chr3.1:73239559-73239578 | MS.gene06941:CDS | 55.0% | |
| GGGCAAGACCATGACTATGC+AGG | - | chr3.1:73240420-73240439 | None:intergenic | 55.0% | |
| GTCCTTGGGCACTTCCTTCA+CGG | - | chr3.1:73241604-73241623 | None:intergenic | 55.0% | |
| TGCCCATACAGAGTTGAGGC+TGG | + | chr3.1:73240435-73240454 | MS.gene06941:CDS | 55.0% | |
| TTGCCTGCAAGTGGTGGTAG+TGG | + | chr3.1:73239914-73239933 | MS.gene06941:CDS | 55.0% | |
| TTGGCTGCAGGGAGACTTGA+TGG | - | chr3.1:73244580-73244599 | None:intergenic | 55.0% | |
| ! | CCCTGCAGCCAAGTTTGCTT+CGG | + | chr3.1:73244588-73244607 | MS.gene06941:CDS | 55.0% |
| ! | CCTGCAGCCAAGTTTGCTTC+GGG | + | chr3.1:73244589-73244608 | MS.gene06941:CDS | 55.0% |
| ! | GTTTTCCTCGACGCTGAGCT+TGG | - | chr3.1:73239732-73239751 | None:intergenic | 55.0% |
| ! | TTGCGTGTATGGGCTGTCCT+TGG | - | chr3.1:73243632-73243651 | None:intergenic | 55.0% |
| !! | ATAGGAACTGGGGTGCTGGT+TGG | + | chr3.1:73243092-73243111 | MS.gene06941:CDS | 55.0% |
| !! | CGTGTTAGCATTGGCCTTGG+TGG | + | chr3.1:73239445-73239464 | MS.gene06941:CDS | 55.0% |
| !! | GACTGGCCTCATGACAAAGC+TGG | + | chr3.1:73244376-73244395 | MS.gene06941:CDS | 55.0% |
| !! | GCGGTATAGGGGCACTATAC+CGG | + | chr3.1:73242380-73242399 | MS.gene06941:intron | 55.0% |
| !! | TAGCATTGGCCTTGGTGGAC+GGG | + | chr3.1:73239450-73239469 | MS.gene06941:CDS | 55.0% |
| !!! | AAATGCCGCCGACTTTTGCG+AGG | + | chr3.1:73241240-73241259 | MS.gene06941:CDS | 55.0% |
| AACTGGCTGGAGCTGCTTCC+AGG | + | chr3.1:73244184-73244203 | MS.gene06941:CDS | 60.0% | |
| ACGGACAGGAGGTTGGCGAA+GGG | - | chr3.1:73244254-73244273 | None:intergenic | 60.0% | |
| AGGCTCTCATTCCGCCCTTC+CGG | + | chr3.1:73244484-73244503 | MS.gene06941:CDS | 60.0% | |
| AGTTCCCAAGCTCAGCGTCG+AGG | + | chr3.1:73239724-73239743 | MS.gene06941:CDS | 60.0% | |
| ATGGCGAGTAGTCCCGTCGA+TGG | + | chr3.1:73243527-73243546 | MS.gene06941:CDS | 60.0% | |
| ATTCCGCCCTTCCGGCAATG+AGG | + | chr3.1:73244492-73244511 | MS.gene06941:CDS | 60.0% | |
| CCCGAAGCAAACTTGGCTGC+AGG | - | chr3.1:73244592-73244611 | None:intergenic | 60.0% | |
| CTCGCCATCTTGGCCCACAA+AGG | - | chr3.1:73243515-73243534 | None:intergenic | 60.0% | |
| GAAGCAGCTCCAGCCAGTTC+TGG | - | chr3.1:73244183-73244202 | None:intergenic | 60.0% | |
| GACGGGACTACTCGCCATCT+TGG | - | chr3.1:73243525-73243544 | None:intergenic | 60.0% | |
| GCGGAATGAGAGCCTCTCTG+AGG | - | chr3.1:73244479-73244498 | None:intergenic | 60.0% | |
| ! | CGGTTGGCTGATCCCAGAGA+AGG | + | chr3.1:73240577-73240596 | MS.gene06941:intron | 60.0% |
| ! | TCTGGGATCAGCCAACCGCA+AGG | - | chr3.1:73240575-73240594 | None:intergenic | 60.0% |
| !! | GACCGTGAAGGAAGTGCCCA+AGG | + | chr3.1:73241599-73241618 | MS.gene06941:intron | 60.0% |
| CACGGACAGGAGGTTGGCGA+AGG | - | chr3.1:73244255-73244274 | None:intergenic | 65.0% | |
| CCAGCGAAACGCAGGGGAAC+AGG | - | chr3.1:73239244-73239263 | None:intergenic | 65.0% | |
| CCTCCTCATTGCCGGAAGGG+CGG | - | chr3.1:73244498-73244517 | None:intergenic | 65.0% | |
| CCTGTTCCCCTGCGTTTCGC+TGG | + | chr3.1:73239241-73239260 | MS.gene06941:CDS | 65.0% | |
| !!! | GCCGCCGACTTTTGCGAGGA+TGG | + | chr3.1:73241244-73241263 | MS.gene06941:CDS | 65.0% |
| CCGCCCTTCCGGCAATGAGG+AGG | + | chr3.1:73244495-73244514 | MS.gene06941:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 73239151 | 73244837 | 73239151 | ID=MS.gene06941 |
| chr3.1 | mRNA | 73239151 | 73244837 | 73239151 | ID=MS.gene06941.t1;Parent=MS.gene06941 |
| chr3.1 | exon | 73239151 | 73239471 | 73239151 | ID=MS.gene06941.t1.exon1;Parent=MS.gene06941.t1 |
| chr3.1 | CDS | 73239151 | 73239471 | 73239151 | ID=cds.MS.gene06941.t1;Parent=MS.gene06941.t1 |
| chr3.1 | exon | 73239559 | 73239602 | 73239559 | ID=MS.gene06941.t1.exon2;Parent=MS.gene06941.t1 |
| chr3.1 | CDS | 73239559 | 73239602 | 73239559 | ID=cds.MS.gene06941.t1;Parent=MS.gene06941.t1 |
| chr3.1 | exon | 73239684 | 73239762 | 73239684 | ID=MS.gene06941.t1.exon3;Parent=MS.gene06941.t1 |
| chr3.1 | CDS | 73239684 | 73239762 | 73239684 | ID=cds.MS.gene06941.t1;Parent=MS.gene06941.t1 |
| chr3.1 | exon | 73239842 | 73239958 | 73239842 | ID=MS.gene06941.t1.exon4;Parent=MS.gene06941.t1 |
| chr3.1 | CDS | 73239842 | 73239958 | 73239842 | ID=cds.MS.gene06941.t1;Parent=MS.gene06941.t1 |
| chr3.1 | exon | 73240105 | 73240287 | 73240105 | ID=MS.gene06941.t1.exon5;Parent=MS.gene06941.t1 |
| chr3.1 | CDS | 73240105 | 73240287 | 73240105 | ID=cds.MS.gene06941.t1;Parent=MS.gene06941.t1 |
| chr3.1 | exon | 73240409 | 73240495 | 73240409 | ID=MS.gene06941.t1.exon6;Parent=MS.gene06941.t1 |
| chr3.1 | CDS | 73240409 | 73240495 | 73240409 | ID=cds.MS.gene06941.t1;Parent=MS.gene06941.t1 |
| chr3.1 | exon | 73241226 | 73241329 | 73241226 | ID=MS.gene06941.t1.exon7;Parent=MS.gene06941.t1 |
| chr3.1 | CDS | 73241226 | 73241329 | 73241226 | ID=cds.MS.gene06941.t1;Parent=MS.gene06941.t1 |
| chr3.1 | exon | 73241409 | 73241496 | 73241409 | ID=MS.gene06941.t1.exon8;Parent=MS.gene06941.t1 |
| chr3.1 | CDS | 73241409 | 73241496 | 73241409 | ID=cds.MS.gene06941.t1;Parent=MS.gene06941.t1 |
| chr3.1 | exon | 73242905 | 73242985 | 73242905 | ID=MS.gene06941.t1.exon9;Parent=MS.gene06941.t1 |
| chr3.1 | CDS | 73242905 | 73242985 | 73242905 | ID=cds.MS.gene06941.t1;Parent=MS.gene06941.t1 |
| chr3.1 | exon | 73243085 | 73243161 | 73243085 | ID=MS.gene06941.t1.exon10;Parent=MS.gene06941.t1 |
| chr3.1 | CDS | 73243085 | 73243161 | 73243085 | ID=cds.MS.gene06941.t1;Parent=MS.gene06941.t1 |
| chr3.1 | exon | 73243485 | 73243620 | 73243485 | ID=MS.gene06941.t1.exon11;Parent=MS.gene06941.t1 |
| chr3.1 | CDS | 73243485 | 73243620 | 73243485 | ID=cds.MS.gene06941.t1;Parent=MS.gene06941.t1 |
| chr3.1 | exon | 73243832 | 73243894 | 73243832 | ID=MS.gene06941.t1.exon12;Parent=MS.gene06941.t1 |
| chr3.1 | CDS | 73243832 | 73243894 | 73243832 | ID=cds.MS.gene06941.t1;Parent=MS.gene06941.t1 |
| chr3.1 | exon | 73244184 | 73244837 | 73244184 | ID=MS.gene06941.t1.exon13;Parent=MS.gene06941.t1 |
| chr3.1 | CDS | 73244184 | 73244837 | 73244184 | ID=cds.MS.gene06941.t1;Parent=MS.gene06941.t1 |
| Gene Sequence |
| Protein sequence |
