Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069960.t1 | XP_003598426.1 | 87.4 | 358 | 33 | 5 | 1 | 347 | 1 | 357 | 4.90E-145 | 524.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069960.t1 | G7IVU4 | 87.4 | 358 | 33 | 5 | 1 | 347 | 1 | 357 | 3.5e-145 | 524.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049989 | MS.gene069960 | 0.80436 | 2.24E-49 | -1.69E-46 |
| MS.gene050297 | MS.gene069960 | 0.847236 | 1.31E-59 | -1.69E-46 |
| MS.gene050310 | MS.gene069960 | 0.815034 | 1.14E-51 | -1.69E-46 |
| MS.gene054554 | MS.gene069960 | 0.805522 | 1.28E-49 | -1.69E-46 |
| MS.gene054643 | MS.gene069960 | 0.810477 | 1.13E-50 | -1.69E-46 |
| MS.gene055764 | MS.gene069960 | 0.81539 | 9.47E-52 | -1.69E-46 |
| MS.gene059300 | MS.gene069960 | 0.812844 | 3.46E-51 | -1.69E-46 |
| MS.gene06057 | MS.gene069960 | 0.832517 | 9.03E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069960.t1 | MTR_3g013540 | 88.372 | 387 | 30 | 6 | 9 | 382 | 10 | 394 | 0.0 | 624 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069960.t1 | AT4G28230 | 35.033 | 451 | 166 | 17 | 1 | 373 | 1 | 402 | 5.78e-46 | 162 |
Find 90 sgRNAs with CRISPR-Local
Find 98 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATAATAGCGGCGAAGTTTA+TGG | 0.231845 | 3.2:-6698226 | MS.gene069960:CDS |
| TCGGAGAATAATAAGGGTTT+AGG | 0.238572 | 3.2:-6697679 | MS.gene069960:CDS |
| AGGGTTTAGGGAGTGAAATT+AGG | 0.247089 | 3.2:-6697666 | MS.gene069960:CDS |
| CGCCGAAATCTAGGGTTAAT+TGG | 0.254719 | 3.2:-6698116 | MS.gene069960:CDS |
| ATCGGAGGAAGTCTTGTTTC+TGG | 0.261254 | 3.2:-6698008 | MS.gene069960:CDS |
| GTTGTTGTTTATGTTGTTCA+TGG | 0.283721 | 3.2:+6698527 | None:intergenic |
| CGGAGAATAATAAGGGTTTA+GGG | 0.320706 | 3.2:-6697678 | MS.gene069960:CDS |
| TTTCTGATACGCCGAAATCT+AGG | 0.331293 | 3.2:-6698125 | MS.gene069960:CDS |
| CTCCAATTAACCCTAGATTT+CGG | 0.345035 | 3.2:+6698114 | None:intergenic |
| TTGCTGAATTGAATGGAAAA+AGG | 0.355155 | 3.2:-6697519 | MS.gene069960:CDS |
| ACTGAATTTGAATTCAAATT+CGG | 0.356555 | 3.2:+6697859 | None:intergenic |
| GGGTTTAGGGAGTGAAATTA+GGG | 0.363796 | 3.2:-6697665 | MS.gene069960:CDS |
| GAAAGGCGCGTTAGTGGAAT+TGG | 0.373264 | 3.2:-6698258 | MS.gene069960:CDS |
| TGGAGAAGAGGAATGAGTTT+AGG | 0.377279 | 3.2:-6698096 | MS.gene069960:CDS |
| GAAAGATGAAGTAATTGTTC+AGG | 0.379973 | 3.2:-6697815 | MS.gene069960:CDS |
| GATGAGAGTCCTAGAGATTC+TGG | 0.380311 | 3.2:-6697556 | MS.gene069960:CDS |
| CTCACATCAACTTCTTCAAT+TGG | 0.396715 | 3.2:+6697622 | None:intergenic |
| CGGCGGAGCCATCACTTTCC+CGG | 0.409068 | 3.2:+6698059 | None:intergenic |
| AGAAGGTGGTTCTGTTTGTC+AGG | 0.409135 | 3.2:-6697446 | MS.gene069960:CDS |
| GTTGCAAGCCGGTATAATTC+CGG | 0.410204 | 3.2:-6697727 | MS.gene069960:CDS |
| GCTTCTGAAAGGCGCGTTAG+TGG | 0.411687 | 3.2:-6698264 | MS.gene069960:CDS |
| TCACCTTCAAACAGTTTCTT+CGG | 0.412912 | 3.2:+6697787 | None:intergenic |
| CGCGTTAGTGGAATTGGTAC+TGG | 0.430435 | 3.2:-6698252 | MS.gene069960:CDS |
| GAAACGACATCGTTTCGTTT+CGG | 0.442140 | 3.2:+6698144 | None:intergenic |
| AAAACGACGCCGTTTCGCTT+CGG | 0.444475 | 3.2:+6698180 | None:intergenic |
| AACCTCATCGTCGAAATCTT+CGG | 0.449800 | 3.2:+6697583 | None:intergenic |
| GACACAACATTGAGCAAGGT+TGG | 0.449844 | 3.2:+6698399 | None:intergenic |
| TTAGGTCCGATGGAGATTGC+CGG | 0.468836 | 3.2:-6698078 | MS.gene069960:CDS |
| TAAGCGATTAACTTCGAAGC+TGG | 0.468919 | 3.2:-6698322 | MS.gene069960:CDS |
| ACACAACATTGAGCAAGGTT+GGG | 0.478469 | 3.2:+6698400 | None:intergenic |
| TTCTGATACGCCGAAATCTA+GGG | 0.492037 | 3.2:-6698124 | MS.gene069960:CDS |
| ATTCAGTTAATTCTGCGGTT+CGG | 0.493390 | 3.2:-6697843 | MS.gene069960:CDS |
| TTACTCCGGCGACGGTGAAT+CGG | 0.497391 | 3.2:-6698026 | MS.gene069960:CDS |
| TTCCGCGATTTCGTCGTCGA+TGG | 0.499149 | 3.2:+6698359 | None:intergenic |
| AAAAGAGTTGCTGAATTGAA+TGG | 0.499593 | 3.2:-6697526 | MS.gene069960:CDS |
| AGAGTGATGGTGGAGGAAGA+AGG | 0.504758 | 3.2:-6697463 | MS.gene069960:CDS |
| GTTACTACACCGAAGCGAAA+CGG | 0.507502 | 3.2:-6698189 | MS.gene069960:CDS |
| TTACTCCGGCGACGGTGAAT+CGG | 0.508232 | 3.2:-6697948 | MS.gene069960:CDS |
| AGTGATGGCTCCGCCGGTGA+TGG | 0.510571 | 3.2:-6698052 | MS.gene069960:CDS |
| TAGGTCCGATGGAGATTGCC+GGG | 0.510662 | 3.2:-6698077 | MS.gene069960:CDS |
| CGGGAAAGTGATGGCTCCGC+CGG | 0.517302 | 3.2:-6698058 | MS.gene069960:CDS |
| TTCCTCCGATTCACCGTCGC+CGG | 0.523310 | 3.2:+6697943 | None:intergenic |
| GGAGGAGAGAGTGATGGTGG+AGG | 0.526833 | 3.2:-6697470 | MS.gene069960:CDS |
| AAATTAGGGCTAAGAAAAGG+TGG | 0.533074 | 3.2:-6697651 | MS.gene069960:CDS |
| TCTAGGGTTAATTGGAGAAG+AGG | 0.540612 | 3.2:-6698108 | MS.gene069960:CDS |
| TTCAAATTCAGTTAATTCTG+CGG | 0.542735 | 3.2:-6697848 | MS.gene069960:CDS |
| TGAGGAGGAGAGAGTGATGG+TGG | 0.546112 | 3.2:-6697473 | MS.gene069960:CDS |
| AGGAATGAGTTTAGGTCCGA+TGG | 0.546332 | 3.2:-6698088 | MS.gene069960:CDS |
| TTCCTCCGATTCACCGTCGC+CGG | 0.547366 | 3.2:+6698021 | None:intergenic |
| CAACCGAAGAAACTGTTTGA+AGG | 0.547501 | 3.2:-6697790 | MS.gene069960:CDS |
| TTAGCAGCACCAGAATCTCT+AGG | 0.553458 | 3.2:+6697547 | None:intergenic |
| GATCACCACCGGAATTATAC+CGG | 0.555656 | 3.2:+6697719 | None:intergenic |
| GCTGAAGATGATGATGATGA+TGG | 0.555877 | 3.2:-6697412 | MS.gene069960:CDS |
| GCCGGTGATGGCGATTACTC+CGG | 0.556185 | 3.2:-6698040 | MS.gene069960:CDS |
| AGTGTTGAAGTTATACCGCC+GGG | 0.561502 | 3.2:-6697973 | MS.gene069960:CDS |
| AAGTGTTGAAGTTATACCGC+CGG | 0.562352 | 3.2:-6697974 | MS.gene069960:CDS |
| GCCGGAGTAATCGCCATCAC+CGG | 0.562464 | 3.2:+6698039 | None:intergenic |
| GATGATGATGATGGTGAACA+AGG | 0.569890 | 3.2:-6697403 | MS.gene069960:CDS |
| GTGAAATTAGGGCTAAGAAA+AGG | 0.569958 | 3.2:-6697654 | MS.gene069960:CDS |
| GTTCCACACTTGAACTTGTG+TGG | 0.572034 | 3.2:+6698491 | None:intergenic |
| GCCGGGGATTACTCCGGCGA+CGG | 0.573422 | 3.2:-6697956 | MS.gene069960:CDS |
| ACTTTCCCGGCAATCTCCAT+CGG | 0.575413 | 3.2:+6698072 | None:intergenic |
| AACCATCGACGACGAAATCG+CGG | 0.578306 | 3.2:-6698361 | MS.gene069960:CDS |
| ACCGTCGCCGGAGTAATCCC+CGG | 0.582081 | 3.2:+6697955 | None:intergenic |
| AAGGTAGAATTGTTGCAAGC+CGG | 0.596788 | 3.2:-6697738 | MS.gene069960:CDS |
| GGAGATTGCCGGGAAAGTGA+TGG | 0.600305 | 3.2:-6698067 | MS.gene069960:CDS |
| TGGAACAACGCCGCATTCGA+CGG | 0.602905 | 3.2:-6698474 | MS.gene069960:CDS |
| CTCCGGCGACGGTGAATCGG+AGG | 0.603994 | 3.2:-6697945 | MS.gene069960:CDS |
| CTCCGGCGACGGTGAATCGG+AGG | 0.603994 | 3.2:-6698023 | MS.gene069960:CDS |
| TTGTGATGAAGATGATGAGG+AGG | 0.605168 | 3.2:-6697488 | MS.gene069960:CDS |
| ATAATTCCGGTGGTGATCCG+AGG | 0.609145 | 3.2:-6697714 | MS.gene069960:CDS |
| TGATGAGGAGGAGAGAGTGA+TGG | 0.612253 | 3.2:-6697476 | MS.gene069960:CDS |
| GAAATCTTCACCGTCGAATG+CGG | 0.612939 | 3.2:+6698464 | None:intergenic |
| GTGATGGTGGAGGAAGAAGG+TGG | 0.616663 | 3.2:-6697460 | MS.gene069960:CDS |
| AATTAGGGCTAAGAAAAGGT+GGG | 0.619997 | 3.2:-6697650 | MS.gene069960:CDS |
| GATGGCGATTACTCCGGCGA+CGG | 0.621049 | 3.2:-6698034 | MS.gene069960:CDS |
| ATTCCACACAAGTTCAAGTG+TGG | 0.622649 | 3.2:-6698494 | MS.gene069960:CDS |
| TATACCGCCGGGGATTACTC+CGG | 0.626435 | 3.2:-6697962 | MS.gene069960:CDS |
| AGAAGACACAACATTGAGCA+AGG | 0.630038 | 3.2:+6698395 | None:intergenic |
| GGAGTAATCGCCATCACCGG+CGG | 0.630868 | 3.2:+6698042 | None:intergenic |
| TACCGAAGATTTCGACGATG+AGG | 0.634952 | 3.2:-6697585 | MS.gene069960:CDS |
| ATTGAAGAAGTTGATGTGAG+TGG | 0.635732 | 3.2:-6697619 | MS.gene069960:CDS |
| GTCTTGTTTCTGGAAACCGC+AGG | 0.638565 | 3.2:-6697998 | MS.gene069960:CDS |
| GTGAAGAAATCGTTGAAACA+AGG | 0.639441 | 3.2:-6697757 | MS.gene069960:CDS |
| GCAAGCCGGTATAATTCCGG+TGG | 0.669216 | 3.2:-6697724 | MS.gene069960:CDS |
| ATAACTTCAACACTTTCCTG+CGG | 0.677868 | 3.2:+6697982 | None:intergenic |
| ATGATGATGATGGTGAACAA+GGG | 0.686347 | 3.2:-6697402 | MS.gene069960:CDS |
| TGGTACTGGAAGAATAATAG+CGG | 0.700889 | 3.2:-6698238 | MS.gene069960:CDS |
| GTGTTGAAGTTATACCGCCG+GGG | 0.738793 | 3.2:-6697972 | MS.gene069960:CDS |
| GTCGCCGGAGTAATCCCCGG+CGG | 0.767884 | 3.2:+6697958 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTGAATTTGAATTCAAATT+CGG | + | chr3.2:6698068-6698087 | None:intergenic | 20.0% |
| ! | TTCAAATTCAGTTAATTCTG+CGG | - | chr3.2:6698076-6698095 | MS.gene069960:CDS | 25.0% |
| AAAAGAGTTGCTGAATTGAA+TGG | - | chr3.2:6698398-6698417 | MS.gene069960:CDS | 30.0% | |
| AAAGAAAAATCGCTTCTGAA+AGG | - | chr3.2:6697649-6697668 | MS.gene069960:CDS | 30.0% | |
| ACTGTTTGAAGGTGAAAAAT+CGG | - | chr3.2:6698145-6698164 | MS.gene069960:CDS | 30.0% | |
| GAAAGATGAAGTAATTGTTC+AGG | - | chr3.2:6698109-6698128 | MS.gene069960:CDS | 30.0% | |
| TTGCTGAATTGAATGGAAAA+AGG | - | chr3.2:6698405-6698424 | MS.gene069960:CDS | 30.0% | |
| ! | ATCGTTTTCGGAGAATAATA+AGG | - | chr3.2:6698238-6698257 | MS.gene069960:CDS | 30.0% |
| ! | GGTGTAGTAACATTTTTCTT+CGG | + | chr3.2:6697726-6697745 | None:intergenic | 30.0% |
| ! | TCGTTTTCGGAGAATAATAA+GGG | - | chr3.2:6698239-6698258 | MS.gene069960:CDS | 30.0% |
| ! | TTTTCTTCACAACTTTCTTG+CGG | + | chr3.2:6698023-6698042 | None:intergenic | 30.0% |
| ! | TTTTTGTGATGAAGATGATG+AGG | - | chr3.2:6698433-6698452 | MS.gene069960:CDS | 30.0% |
| AAATTAGGGCTAAGAAAAGG+TGG | - | chr3.2:6698273-6698292 | MS.gene069960:CDS | 35.0% | |
| AATAATAGCGGCGAAGTTTA+TGG | - | chr3.2:6697698-6697717 | MS.gene069960:CDS | 35.0% | |
| AATTAGGGCTAAGAAAAGGT+GGG | - | chr3.2:6698274-6698293 | MS.gene069960:CDS | 35.0% | |
| ATAACTTCAACACTTTCCTG+CGG | + | chr3.2:6697945-6697964 | None:intergenic | 35.0% | |
| ATTCAGTTAATTCTGCGGTT+CGG | - | chr3.2:6698081-6698100 | MS.gene069960:CDS | 35.0% | |
| CGGAGAATAATAAGGGTTTA+GGG | - | chr3.2:6698246-6698265 | MS.gene069960:CDS | 35.0% | |
| CTCACATCAACTTCTTCAAT+TGG | + | chr3.2:6698305-6698324 | None:intergenic | 35.0% | |
| CTCCAATTAACCCTAGATTT+CGG | + | chr3.2:6697813-6697832 | None:intergenic | 35.0% | |
| GTGAAATTAGGGCTAAGAAA+AGG | - | chr3.2:6698270-6698289 | MS.gene069960:CDS | 35.0% | |
| GTGAAGAAATCGTTGAAACA+AGG | - | chr3.2:6698167-6698186 | MS.gene069960:CDS | 35.0% | |
| TCACCTTCAAACAGTTTCTT+CGG | + | chr3.2:6698140-6698159 | None:intergenic | 35.0% | |
| TCGGAGAATAATAAGGGTTT+AGG | - | chr3.2:6698245-6698264 | MS.gene069960:CDS | 35.0% | |
| ! | TGGTACTGGAAGAATAATAG+CGG | - | chr3.2:6697686-6697705 | MS.gene069960:CDS | 35.0% |
| !! | ATGATGATGATGGTGAACAA+GGG | - | chr3.2:6698522-6698541 | MS.gene069960:CDS | 35.0% |
| !! | ATTGAAGAAGTTGATGTGAG+TGG | - | chr3.2:6698305-6698324 | MS.gene069960:CDS | 35.0% |
| AACCTCATCGTCGAAATCTT+CGG | + | chr3.2:6698344-6698363 | None:intergenic | 40.0% | |
| AAGGTAGAATTGTTGCAAGC+CGG | - | chr3.2:6698186-6698205 | MS.gene069960:CDS | 40.0% | |
| ACACAACATTGAGCAAGGTT+GGG | + | chr3.2:6697527-6697546 | None:intergenic | 40.0% | |
| AGAAGACACAACATTGAGCA+AGG | + | chr3.2:6697532-6697551 | None:intergenic | 40.0% | |
| AGGGTTTAGGGAGTGAAATT+AGG | - | chr3.2:6698258-6698277 | MS.gene069960:CDS | 40.0% | |
| ATTCCACACAAGTTCAAGTG+TGG | - | chr3.2:6697430-6697449 | MS.gene069960:CDS | 40.0% | |
| CAACCGAAGAAACTGTTTGA+AGG | - | chr3.2:6698134-6698153 | MS.gene069960:CDS | 40.0% | |
| GAAACGACATCGTTTCGTTT+CGG | + | chr3.2:6697783-6697802 | None:intergenic | 40.0% | |
| GGGTTTAGGGAGTGAAATTA+GGG | - | chr3.2:6698259-6698278 | MS.gene069960:CDS | 40.0% | |
| TAAGCGATTAACTTCGAAGC+TGG | - | chr3.2:6697602-6697621 | MS.gene069960:CDS | 40.0% | |
| TGGAGAAGAGGAATGAGTTT+AGG | - | chr3.2:6697828-6697847 | MS.gene069960:CDS | 40.0% | |
| TTCTGATACGCCGAAATCTA+GGG | - | chr3.2:6697800-6697819 | MS.gene069960:CDS | 40.0% | |
| TTGTGATGAAGATGATGAGG+AGG | - | chr3.2:6698436-6698455 | MS.gene069960:CDS | 40.0% | |
| TTTCTGATACGCCGAAATCT+AGG | - | chr3.2:6697799-6697818 | MS.gene069960:CDS | 40.0% | |
| ! | GCTGAAGATGATGATGATGA+TGG | - | chr3.2:6698512-6698531 | MS.gene069960:CDS | 40.0% |
| ! | TCCGAAAACGATCTTTTCCT+CGG | + | chr3.2:6698230-6698249 | None:intergenic | 40.0% |
| ! | TCCGAGGAAAAGATCGTTTT+CGG | - | chr3.2:6698226-6698245 | MS.gene069960:CDS | 40.0% |
| ! | TCTAGGGTTAATTGGAGAAG+AGG | - | chr3.2:6697816-6697835 | MS.gene069960:CDS | 40.0% |
| !! | AAGTGTTGAAGTTATACCGC+CGG | - | chr3.2:6697950-6697969 | MS.gene069960:CDS | 40.0% |
| !! | GATGATGATGATGGTGAACA+AGG | - | chr3.2:6698521-6698540 | MS.gene069960:CDS | 40.0% |
| AGGAATGAGTTTAGGTCCGA+TGG | - | chr3.2:6697836-6697855 | MS.gene069960:CDS | 45.0% | |
| GAAATCTTCACCGTCGAATG+CGG | + | chr3.2:6697463-6697482 | None:intergenic | 45.0% | |
| GACACAACATTGAGCAAGGT+TGG | + | chr3.2:6697528-6697547 | None:intergenic | 45.0% | |
| GATCACCACCGGAATTATAC+CGG | + | chr3.2:6698208-6698227 | None:intergenic | 45.0% | |
| GATGAGAGTCCTAGAGATTC+TGG | - | chr3.2:6698368-6698387 | MS.gene069960:CDS | 45.0% | |
| GTTACTACACCGAAGCGAAA+CGG | - | chr3.2:6697735-6697754 | MS.gene069960:CDS | 45.0% | |
| GTTCCACACTTGAACTTGTG+TGG | + | chr3.2:6697436-6697455 | None:intergenic | 45.0% | |
| GTTGCAAGCCGGTATAATTC+CGG | - | chr3.2:6698197-6698216 | MS.gene069960:CDS | 45.0% | |
| TACCGAAGATTTCGACGATG+AGG | - | chr3.2:6698339-6698358 | MS.gene069960:CDS | 45.0% | |
| TTAGCAGCACCAGAATCTCT+AGG | + | chr3.2:6698380-6698399 | None:intergenic | 45.0% | |
| ! | AGAAGGTGGTTCTGTTTGTC+AGG | - | chr3.2:6698478-6698497 | MS.gene069960:CDS | 45.0% |
| ! | AGTGTTGAAGTTATACCGCC+GGG | - | chr3.2:6697951-6697970 | MS.gene069960:CDS | 45.0% |
| ! | CGCCGAAATCTAGGGTTAAT+TGG | - | chr3.2:6697808-6697827 | MS.gene069960:CDS | 45.0% |
| !! | ATCGGAGGAAGTCTTGTTTC+TGG | - | chr3.2:6697916-6697935 | MS.gene069960:CDS | 45.0% |
| AAAACGACGCCGTTTCGCTT+CGG | + | chr3.2:6697747-6697766 | None:intergenic | 50.0% | |
| AACCATCGACGACGAAATCG+CGG | - | chr3.2:6697563-6697582 | MS.gene069960:CDS | 50.0% | |
| ACTTTCCCGGCAATCTCCAT+CGG | + | chr3.2:6697855-6697874 | None:intergenic | 50.0% | |
| ATAATTCCGGTGGTGATCCG+AGG | - | chr3.2:6698210-6698229 | MS.gene069960:CDS | 50.0% | |
| CGCGTTAGTGGAATTGGTAC+TGG | - | chr3.2:6697672-6697691 | MS.gene069960:CDS | 50.0% | |
| GTGTTGAAGTTATACCGCCG+GGG | - | chr3.2:6697952-6697971 | MS.gene069960:CDS | 50.0% | |
| TGATGAGGAGGAGAGAGTGA+TGG | - | chr3.2:6698448-6698467 | MS.gene069960:CDS | 50.0% | |
| TTAGGTCCGATGGAGATTGC+CGG | - | chr3.2:6697846-6697865 | MS.gene069960:CDS | 50.0% | |
| ! | GAAAGGCGCGTTAGTGGAAT+TGG | - | chr3.2:6697666-6697685 | MS.gene069960:CDS | 50.0% |
| ! | TCTTTTCCTCGGATCACCAC+CGG | + | chr3.2:6698219-6698238 | None:intergenic | 50.0% |
| !! | AAACGGCGTCGTTTTCAAGG+AGG | - | chr3.2:6697752-6697771 | MS.gene069960:CDS | 50.0% |
| !! | AGAGTGATGGTGGAGGAAGA+AGG | - | chr3.2:6698461-6698480 | MS.gene069960:CDS | 50.0% |
| !! | GTCTTGTTTCTGGAAACCGC+AGG | - | chr3.2:6697926-6697945 | MS.gene069960:CDS | 50.0% |
| GCAAGCCGGTATAATTCCGG+TGG | - | chr3.2:6698200-6698219 | MS.gene069960:CDS | 55.0% | |
| GGAGATTGCCGGGAAAGTGA+TGG | - | chr3.2:6697857-6697876 | MS.gene069960:CDS | 55.0% | |
| TAGGTCCGATGGAGATTGCC+GGG | - | chr3.2:6697847-6697866 | MS.gene069960:CDS | 55.0% | |
| TATACCGCCGGGGATTACTC+CGG | - | chr3.2:6697962-6697981 | MS.gene069960:CDS | 55.0% | |
| TGAGGAGGAGAGAGTGATGG+TGG | - | chr3.2:6698451-6698470 | MS.gene069960:CDS | 55.0% | |
| TGGAACAACGCCGCATTCGA+CGG | - | chr3.2:6697450-6697469 | MS.gene069960:CDS | 55.0% | |
| TTACTCCGGCGACGGTGAAT+CGG | - | chr3.2:6697898-6697917 | MS.gene069960:CDS | 55.0% | |
| TTCCGCGATTTCGTCGTCGA+TGG | + | chr3.2:6697568-6697587 | None:intergenic | 55.0% | |
| ! | GCTTCTGAAAGGCGCGTTAG+TGG | - | chr3.2:6697660-6697679 | MS.gene069960:CDS | 55.0% |
| !! | GCGAAACGGCGTCGTTTTCA+AGG | - | chr3.2:6697749-6697768 | MS.gene069960:CDS | 55.0% |
| !! | GTGATGGTGGAGGAAGAAGG+TGG | - | chr3.2:6698464-6698483 | MS.gene069960:CDS | 55.0% |
| GATGGCGATTACTCCGGCGA+CGG | - | chr3.2:6697890-6697909 | MS.gene069960:CDS | 60.0% | |
| GCCGGAGTAATCGCCATCAC+CGG | + | chr3.2:6697888-6697907 | None:intergenic | 60.0% | |
| GGAGTAATCGCCATCACCGG+CGG | + | chr3.2:6697885-6697904 | None:intergenic | 60.0% | |
| TTCCTCCGATTCACCGTCGC+CGG | + | chr3.2:6697906-6697925 | None:intergenic | 60.0% | |
| ! | GCCGGTGATGGCGATTACTC+CGG | - | chr3.2:6697884-6697903 | MS.gene069960:CDS | 60.0% |
| !! | GGAGGAGAGAGTGATGGTGG+AGG | - | chr3.2:6698454-6698473 | MS.gene069960:CDS | 60.0% |
| ACCGTCGCCGGAGTAATCCC+CGG | + | chr3.2:6697972-6697991 | None:intergenic | 65.0% | |
| AGTGATGGCTCCGCCGGTGA+TGG | - | chr3.2:6697872-6697891 | MS.gene069960:CDS | 65.0% | |
| CGGCGGAGCCATCACTTTCC+CGG | + | chr3.2:6697868-6697887 | None:intergenic | 65.0% | |
| CGGGAAAGTGATGGCTCCGC+CGG | - | chr3.2:6697866-6697885 | MS.gene069960:CDS | 65.0% | |
| CTCCGGCGACGGTGAATCGG+AGG | - | chr3.2:6697901-6697920 | MS.gene069960:CDS | 70.0% | |
| GCCGGGGATTACTCCGGCGA+CGG | - | chr3.2:6697968-6697987 | MS.gene069960:CDS | 70.0% | |
| GTCGCCGGAGTAATCCCCGG+CGG | + | chr3.2:6697969-6697988 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 6697399 | 6698547 | 6697399 | ID=MS.gene069960 |
| chr3.2 | mRNA | 6697399 | 6698547 | 6697399 | ID=MS.gene069960.t1;Parent=MS.gene069960 |
| chr3.2 | exon | 6697399 | 6698547 | 6697399 | ID=MS.gene069960.t1.exon1;Parent=MS.gene069960.t1 |
| chr3.2 | CDS | 6697399 | 6698547 | 6697399 | ID=cds.MS.gene069960.t1;Parent=MS.gene069960.t1 |
| Gene Sequence |
| Protein sequence |
