Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054554.t1 | XP_024638330.1 | 90.7 | 312 | 26 | 2 | 1 | 311 | 1 | 310 | 1.30E-141 | 512.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054554.t1 | Q94AN4 | 64.9 | 291 | 85 | 4 | 29 | 311 | 46 | 327 | 4.5e-95 | 349.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054554.t1 | A0A396HYJ4 | 90.7 | 312 | 26 | 2 | 1 | 311 | 1 | 310 | 9.1e-142 | 512.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene054554.t1 | TF | AP2/ERF-AP2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050838 | MS.gene054554 | 0.81418 | 1.76E-51 | -1.69E-46 |
| MS.gene051234 | MS.gene054554 | 0.804228 | 2.39E-49 | -1.69E-46 |
| MS.gene051885 | MS.gene054554 | 0.81696 | 4.22E-52 | -1.69E-46 |
| MS.gene052335 | MS.gene054554 | 0.819978 | 8.74E-53 | -1.69E-46 |
| MS.gene053143 | MS.gene054554 | 0.870388 | 1.52E-66 | -1.69E-46 |
| MS.gene053144 | MS.gene054554 | 0.821754 | 3.41E-53 | -1.69E-46 |
| MS.gene053171 | MS.gene054554 | 0.927649 | 8.76E-92 | -1.69E-46 |
| MS.gene053581 | MS.gene054554 | 0.844647 | 6.64E-59 | -1.69E-46 |
| MS.gene054554 | MS.gene054584 | 0.825198 | 5.34E-54 | -1.69E-46 |
| MS.gene054554 | MS.gene054585 | 0.820433 | 6.88E-53 | -1.69E-46 |
| MS.gene054554 | MS.gene055469 | 0.805288 | 1.44E-49 | -1.69E-46 |
| MS.gene054554 | MS.gene055537 | 0.811164 | 8.03E-51 | -1.69E-46 |
| MS.gene054554 | MS.gene058492 | 0.818041 | 2.41E-52 | -1.69E-46 |
| MS.gene054554 | MS.gene058649 | 0.806185 | 9.30E-50 | -1.69E-46 |
| MS.gene054554 | MS.gene05870 | 0.812526 | 4.06E-51 | -1.69E-46 |
| MS.gene054554 | MS.gene061100 | 0.813782 | 2.15E-51 | -1.69E-46 |
| MS.gene054554 | MS.gene061707 | 0.816371 | 5.72E-52 | -1.69E-46 |
| MS.gene054554 | MS.gene06258 | 0.819066 | 1.41E-52 | -1.69E-46 |
| MS.gene054554 | MS.gene064243 | 0.831508 | 1.60E-55 | -1.69E-46 |
| MS.gene054554 | MS.gene064737 | 0.82308 | 1.68E-53 | -1.69E-46 |
| MS.gene054554 | MS.gene065055 | 0.810944 | 8.96E-51 | -1.69E-46 |
| MS.gene054554 | MS.gene066196 | 0.828332 | 9.54E-55 | -1.69E-46 |
| MS.gene054554 | MS.gene068022 | 0.84217 | 3.05E-58 | -1.69E-46 |
| MS.gene054554 | MS.gene068925 | 0.801143 | 1.03E-48 | -1.69E-46 |
| MS.gene054554 | MS.gene069307 | 0.804042 | 2.61E-49 | -1.69E-46 |
| MS.gene054554 | MS.gene069960 | 0.805522 | 1.28E-49 | -1.69E-46 |
| MS.gene054554 | MS.gene070339 | 0.8084 | 3.15E-50 | -1.69E-46 |
| MS.gene054554 | MS.gene07059 | 0.813811 | 2.12E-51 | -1.69E-46 |
| MS.gene054554 | MS.gene072641 | 0.823164 | 1.61E-53 | -1.69E-46 |
| MS.gene054554 | MS.gene072905 | 0.827861 | 1.24E-54 | -1.69E-46 |
| MS.gene054554 | MS.gene07291 | 0.800382 | 1.48E-48 | -1.69E-46 |
| MS.gene054554 | MS.gene09612 | 0.813003 | 3.19E-51 | -1.69E-46 |
| MS.gene054554 | MS.gene20002 | 0.814181 | 1.76E-51 | -1.69E-46 |
| MS.gene054554 | MS.gene20003 | 0.809262 | 2.06E-50 | -1.69E-46 |
| MS.gene054554 | MS.gene20004 | 0.844664 | 6.57E-59 | -1.69E-46 |
| MS.gene054554 | MS.gene20335 | 0.826807 | 2.22E-54 | -1.69E-46 |
| MS.gene054554 | MS.gene20457 | 0.802812 | 4.70E-49 | -1.69E-46 |
| MS.gene054554 | MS.gene20637 | 0.813211 | 2.87E-51 | -1.69E-46 |
| MS.gene054554 | MS.gene20903 | 0.815892 | 7.32E-52 | -1.69E-46 |
| MS.gene054554 | MS.gene23766 | 0.820747 | 5.83E-53 | -1.69E-46 |
| MS.gene054554 | MS.gene23949 | 0.808056 | 3.74E-50 | -1.69E-46 |
| MS.gene054554 | MS.gene25981 | -0.807526 | 4.84E-50 | -1.69E-46 |
| MS.gene054554 | MS.gene26380 | 0.827674 | 1.37E-54 | -1.69E-46 |
| MS.gene054554 | MS.gene26387 | 0.811248 | 7.70E-51 | -1.69E-46 |
| MS.gene054554 | MS.gene26659 | 0.805722 | 1.16E-49 | -1.69E-46 |
| MS.gene054554 | MS.gene26855 | 0.800354 | 1.50E-48 | -1.69E-46 |
| MS.gene054554 | MS.gene27222 | 0.81801 | 2.45E-52 | -1.69E-46 |
| MS.gene054554 | MS.gene27646 | -0.801282 | 9.69E-49 | -1.69E-46 |
| MS.gene054554 | MS.gene27831 | 0.819465 | 1.15E-52 | -1.69E-46 |
| MS.gene054554 | MS.gene28632 | 0.81007 | 1.38E-50 | -1.69E-46 |
| MS.gene054554 | MS.gene28813 | 0.835769 | 1.38E-56 | -1.69E-46 |
| MS.gene054554 | MS.gene28979 | 0.852204 | 5.38E-61 | -1.69E-46 |
| MS.gene054554 | MS.gene29355 | 0.824312 | 8.64E-54 | -1.69E-46 |
| MS.gene054554 | MS.gene31203 | 0.803624 | 3.19E-49 | -1.69E-46 |
| MS.gene054554 | MS.gene31571 | 0.806674 | 7.33E-50 | -1.69E-46 |
| MS.gene054554 | MS.gene32853 | 0.817982 | 2.49E-52 | -1.69E-46 |
| MS.gene054554 | MS.gene34164 | 0.817717 | 2.85E-52 | -1.69E-46 |
| MS.gene054554 | MS.gene34286 | 0.826393 | 2.78E-54 | -1.69E-46 |
| MS.gene054554 | MS.gene36265 | 0.809838 | 1.55E-50 | -1.69E-46 |
| MS.gene054554 | MS.gene36285 | 0.855895 | 4.64E-62 | -1.69E-46 |
| MS.gene054554 | MS.gene37459 | 0.818661 | 1.74E-52 | -1.69E-46 |
| MS.gene054554 | MS.gene38302 | 0.849807 | 2.55E-60 | -1.69E-46 |
| MS.gene054554 | MS.gene38303 | 0.832805 | 7.67E-56 | -1.69E-46 |
| MS.gene054554 | MS.gene38829 | 0.805723 | 1.16E-49 | -1.69E-46 |
| MS.gene054554 | MS.gene39052 | 0.803329 | 3.67E-49 | -1.69E-46 |
| MS.gene054554 | MS.gene40739 | 0.802363 | 5.81E-49 | -1.69E-46 |
| MS.gene054554 | MS.gene41651 | 0.830738 | 2.48E-55 | -1.69E-46 |
| MS.gene054554 | MS.gene41692 | 0.81609 | 6.62E-52 | -1.69E-46 |
| MS.gene054554 | MS.gene42377 | 0.840006 | 1.13E-57 | -1.69E-46 |
| MS.gene054554 | MS.gene44326 | 0.802449 | 5.58E-49 | -1.69E-46 |
| MS.gene054554 | MS.gene45281 | 0.820519 | 6.57E-53 | -1.69E-46 |
| MS.gene054554 | MS.gene51384 | 0.810231 | 1.28E-50 | -1.69E-46 |
| MS.gene054554 | MS.gene52155 | 0.819646 | 1.04E-52 | -1.69E-46 |
| MS.gene054554 | MS.gene54548 | 0.804586 | 2.01E-49 | -1.69E-46 |
| MS.gene054554 | MS.gene54669 | 0.805497 | 1.30E-49 | -1.69E-46 |
| MS.gene054554 | MS.gene55423 | 0.827119 | 1.87E-54 | -1.69E-46 |
| MS.gene054554 | MS.gene55425 | 0.811593 | 6.48E-51 | -1.69E-46 |
| MS.gene054554 | MS.gene55623 | 0.855602 | 5.65E-62 | -1.69E-46 |
| MS.gene054554 | MS.gene55904 | 0.84216 | 3.06E-58 | -1.69E-46 |
| MS.gene054554 | MS.gene56476 | 0.829149 | 6.05E-55 | -1.69E-46 |
| MS.gene054554 | MS.gene57088 | 0.805729 | 1.16E-49 | -1.69E-46 |
| MS.gene054554 | MS.gene57609 | 0.808968 | 2.39E-50 | -1.69E-46 |
| MS.gene054554 | MS.gene58096 | 0.800297 | 1.54E-48 | -1.69E-46 |
| MS.gene054554 | MS.gene58214 | 0.803366 | 3.61E-49 | -1.69E-46 |
| MS.gene054554 | MS.gene58836 | 0.813294 | 2.75E-51 | -1.69E-46 |
| MS.gene054554 | MS.gene59241 | 0.840079 | 1.08E-57 | -1.69E-46 |
| MS.gene054554 | MS.gene59242 | 0.845984 | 2.89E-59 | -1.69E-46 |
| MS.gene054554 | MS.gene60535 | 0.805945 | 1.04E-49 | -1.69E-46 |
| MS.gene054554 | MS.gene60540 | 0.802929 | 4.44E-49 | -1.69E-46 |
| MS.gene054554 | MS.gene62423 | 0.827782 | 1.29E-54 | -1.69E-46 |
| MS.gene054554 | MS.gene62924 | 0.804837 | 1.78E-49 | -1.69E-46 |
| MS.gene054554 | MS.gene65433 | 0.961564 | 7.54E-120 | -1.69E-46 |
| MS.gene054554 | MS.gene66156 | 0.826463 | 2.68E-54 | -1.69E-46 |
| MS.gene054554 | MS.gene66803 | 0.806028 | 1.00E-49 | -1.69E-46 |
| MS.gene054554 | MS.gene66845 | 0.801994 | 6.92E-49 | -1.69E-46 |
| MS.gene054554 | MS.gene67231 | 0.805169 | 1.52E-49 | -1.69E-46 |
| MS.gene054554 | MS.gene67881 | 0.845776 | 3.29E-59 | -1.69E-46 |
| MS.gene054554 | MS.gene68060 | 0.801317 | 9.53E-49 | -1.69E-46 |
| MS.gene054554 | MS.gene68106 | 0.856433 | 3.23E-62 | -1.69E-46 |
| MS.gene054554 | MS.gene68107 | 0.83279 | 7.73E-56 | -1.69E-46 |
| MS.gene054554 | MS.gene68418 | 0.849627 | 2.86E-60 | -1.69E-46 |
| MS.gene054554 | MS.gene68420 | 0.86632 | 3.11E-65 | -1.69E-46 |
| MS.gene054554 | MS.gene69422 | 0.835855 | 1.32E-56 | -1.69E-46 |
| MS.gene054554 | MS.gene72170 | 0.806728 | 7.15E-50 | -1.69E-46 |
| MS.gene054554 | MS.gene74235 | 0.81116 | 8.04E-51 | -1.69E-46 |
| MS.gene054554 | MS.gene74606 | 0.826619 | 2.46E-54 | -1.69E-46 |
| MS.gene054554 | MS.gene74972 | 0.810391 | 1.18E-50 | -1.69E-46 |
| MS.gene054554 | MS.gene75604 | 0.802449 | 5.58E-49 | -1.69E-46 |
| MS.gene054554 | MS.gene76314 | 0.800197 | 1.61E-48 | -1.69E-46 |
| MS.gene054554 | MS.gene79607 | 0.807339 | 5.31E-50 | -1.69E-46 |
| MS.gene054554 | MS.gene81030 | 0.805722 | 1.16E-49 | -1.69E-46 |
| MS.gene054554 | MS.gene81663 | 0.801586 | 8.40E-49 | -1.69E-46 |
| MS.gene054554 | MS.gene82912 | 0.804806 | 1.81E-49 | -1.69E-46 |
| MS.gene054554 | MS.gene82989 | 0.819937 | 8.93E-53 | -1.69E-46 |
| MS.gene054554 | MS.gene83309 | 0.814571 | 1.44E-51 | -1.69E-46 |
| MS.gene054554 | MS.gene84824 | 0.808316 | 3.29E-50 | -1.69E-46 |
| MS.gene054554 | MS.gene88718 | 0.813913 | 2.01E-51 | -1.69E-46 |
| MS.gene054554 | MS.gene88927 | 0.804376 | 2.23E-49 | -1.69E-46 |
| MS.gene054554 | MS.gene89100 | 0.846954 | 1.57E-59 | -1.69E-46 |
| MS.gene054554 | MS.gene90121 | 0.80327 | 3.78E-49 | -1.69E-46 |
| MS.gene054554 | MS.gene90381 | 0.810988 | 8.76E-51 | -1.69E-46 |
| MS.gene054554 | MS.gene90778 | 0.802676 | 5.01E-49 | -1.69E-46 |
| MS.gene054554 | MS.gene99044 | 0.805329 | 1.41E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054554.t1 | MTR_4g007770 | 93.082 | 318 | 16 | 3 | 1 | 317 | 1 | 313 | 0.0 | 546 |
| MS.gene054554.t1 | MTR_4g130270 | 58.774 | 359 | 102 | 5 | 1 | 322 | 1 | 350 | 4.27e-137 | 393 |
| MS.gene054554.t1 | MTR_2g460730 | 57.835 | 351 | 92 | 8 | 1 | 307 | 1 | 339 | 3.57e-120 | 350 |
| MS.gene054554.t1 | MTR_8g044070 | 55.513 | 263 | 87 | 4 | 26 | 288 | 43 | 275 | 1.38e-94 | 287 |
| MS.gene054554.t1 | MTR_7g009410 | 66.990 | 206 | 60 | 3 | 22 | 224 | 46 | 246 | 2.43e-94 | 285 |
| MS.gene054554.t1 | MTR_6g011490 | 75.595 | 168 | 38 | 1 | 42 | 209 | 65 | 229 | 2.19e-91 | 277 |
| MS.gene054554.t1 | MTR_4g127930 | 72.781 | 169 | 46 | 0 | 37 | 205 | 158 | 326 | 9.73e-90 | 277 |
| MS.gene054554.t1 | MTR_8g044040 | 74.444 | 180 | 43 | 1 | 33 | 212 | 51 | 227 | 4.07e-89 | 272 |
| MS.gene054554.t1 | MTR_8g044040 | 41.176 | 85 | 42 | 2 | 40 | 124 | 157 | 233 | 1.41e-11 | 65.1 |
| MS.gene054554.t1 | MTR_8g468920 | 76.271 | 177 | 39 | 1 | 37 | 213 | 68 | 241 | 1.83e-88 | 271 |
| MS.gene054554.t1 | MTR_4g065370 | 62.755 | 196 | 70 | 1 | 13 | 205 | 135 | 330 | 4.90e-86 | 269 |
| MS.gene054554.t1 | MTR_2g098180 | 63.731 | 193 | 68 | 1 | 13 | 205 | 144 | 334 | 1.63e-85 | 267 |
| MS.gene054554.t1 | MTR_7g080460 | 68.889 | 180 | 53 | 1 | 29 | 205 | 247 | 426 | 2.55e-85 | 271 |
| MS.gene054554.t1 | MTR_5g015070 | 62.312 | 199 | 70 | 1 | 12 | 205 | 218 | 416 | 8.99e-84 | 263 |
| MS.gene054554.t1 | MTR_1g017400 | 69.231 | 169 | 49 | 1 | 37 | 205 | 311 | 476 | 1.25e-79 | 255 |
| MS.gene054554.t1 | MTR_8g020510 | 65.385 | 182 | 57 | 2 | 27 | 205 | 234 | 412 | 2.40e-79 | 252 |
| MS.gene054554.t1 | MTR_4g097520 | 67.039 | 179 | 54 | 2 | 27 | 205 | 301 | 474 | 1.82e-78 | 252 |
| MS.gene054554.t1 | MTR_8g068510 | 65.169 | 178 | 59 | 1 | 28 | 205 | 121 | 295 | 3.29e-78 | 244 |
| MS.gene054554.t1 | MTR_3g103460 | 66.480 | 179 | 55 | 2 | 27 | 205 | 301 | 474 | 5.46e-78 | 251 |
| MS.gene054554.t1 | MTR_5g031880 | 69.822 | 169 | 48 | 1 | 37 | 205 | 223 | 388 | 3.79e-70 | 227 |
| MS.gene054554.t1 | MTR_7g091390 | 59.060 | 149 | 53 | 2 | 21 | 169 | 40 | 180 | 2.77e-46 | 162 |
| MS.gene054554.t1 | MTR_7g100590 | 49.282 | 209 | 81 | 6 | 42 | 250 | 140 | 323 | 9.73e-46 | 162 |
| MS.gene054554.t1 | MTR_4g094868 | 50.000 | 198 | 78 | 4 | 42 | 239 | 177 | 353 | 1.29e-45 | 162 |
| MS.gene054554.t1 | MTR_4g094868 | 45.701 | 221 | 108 | 4 | 42 | 261 | 177 | 386 | 3.22e-45 | 161 |
| MS.gene054554.t1 | MTR_2g093060 | 48.039 | 204 | 82 | 5 | 42 | 245 | 135 | 314 | 3.33e-44 | 157 |
| MS.gene054554.t1 | MTR_2g093060 | 48.039 | 204 | 82 | 5 | 42 | 245 | 135 | 314 | 3.50e-44 | 157 |
| MS.gene054554.t1 | MTR_5g016810 | 49.741 | 193 | 78 | 4 | 42 | 234 | 153 | 326 | 3.55e-44 | 158 |
| MS.gene054554.t1 | MTR_4g061200 | 47.087 | 206 | 85 | 5 | 42 | 247 | 132 | 313 | 3.38e-43 | 153 |
| MS.gene054554.t1 | MTR_4g061200 | 47.087 | 206 | 85 | 5 | 42 | 247 | 132 | 313 | 9.38e-43 | 154 |
| MS.gene054554.t1 | MTR_5g016810 | 47.739 | 199 | 79 | 5 | 42 | 234 | 153 | 332 | 2.89e-41 | 150 |
| MS.gene054554.t1 | MTR_4g094868 | 44.000 | 200 | 110 | 2 | 63 | 261 | 32 | 230 | 5.12e-38 | 139 |
| MS.gene054554.t1 | MTR_2g093060 | 44.608 | 204 | 74 | 6 | 42 | 245 | 135 | 299 | 5.43e-35 | 132 |
| MS.gene054554.t1 | MTR_4g061200 | 43.689 | 206 | 77 | 6 | 42 | 247 | 132 | 298 | 6.01e-34 | 128 |
| MS.gene054554.t1 | MTR_7g061190 | 51.724 | 145 | 68 | 2 | 73 | 217 | 3 | 145 | 1.14e-33 | 121 |
| MS.gene054554.t1 | MTR_4g061200 | 43.689 | 206 | 77 | 6 | 42 | 247 | 132 | 298 | 1.64e-33 | 128 |
| MS.gene054554.t1 | MTR_7g091390 | 62.105 | 95 | 31 | 1 | 75 | 169 | 3 | 92 | 2.42e-24 | 101 |
| MS.gene054554.t1 | MTR_1g049140 | 45.588 | 136 | 63 | 3 | 32 | 167 | 128 | 252 | 1.82e-19 | 86.7 |
| MS.gene054554.t1 | MTR_1g049140 | 41.104 | 163 | 83 | 5 | 32 | 193 | 128 | 278 | 1.97e-19 | 88.2 |
| MS.gene054554.t1 | MTR_1g049140 | 41.104 | 163 | 83 | 5 | 32 | 193 | 128 | 278 | 6.19e-19 | 86.7 |
| MS.gene054554.t1 | MTR_3g090510 | 47.222 | 108 | 56 | 1 | 79 | 186 | 163 | 269 | 7.21e-19 | 87.0 |
| MS.gene054554.t1 | MTR_7g060560 | 42.391 | 92 | 51 | 2 | 95 | 186 | 172 | 261 | 7.32e-16 | 78.2 |
| MS.gene054554.t1 | MTR_1g070045 | 31.967 | 122 | 74 | 3 | 33 | 153 | 57 | 170 | 7.44e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054554.t1 | AT1G16060 | 61.935 | 310 | 115 | 2 | 3 | 311 | 20 | 327 | 1.21e-112 | 330 |
| MS.gene054554.t1 | AT1G79700 | 66.438 | 292 | 68 | 7 | 24 | 314 | 35 | 297 | 9.91e-110 | 322 |
| MS.gene054554.t1 | AT1G79700 | 63.014 | 292 | 68 | 8 | 24 | 314 | 35 | 287 | 3.05e-98 | 292 |
| MS.gene054554.t1 | AT3G54320 | 73.737 | 198 | 43 | 2 | 24 | 212 | 39 | 236 | 1.84e-91 | 279 |
| MS.gene054554.t1 | AT3G54320 | 73.367 | 199 | 44 | 2 | 23 | 212 | 38 | 236 | 2.56e-91 | 279 |
| MS.gene054554.t1 | AT5G57390 | 67.553 | 188 | 50 | 1 | 37 | 213 | 81 | 268 | 2.74e-89 | 274 |
| MS.gene054554.t1 | AT5G57390 | 67.553 | 188 | 50 | 1 | 37 | 213 | 199 | 386 | 1.93e-88 | 275 |
| MS.gene054554.t1 | AT1G51190 | 60.294 | 204 | 81 | 0 | 2 | 205 | 151 | 354 | 8.07e-86 | 269 |
| MS.gene054554.t1 | AT1G72570 | 67.033 | 182 | 57 | 1 | 27 | 205 | 206 | 387 | 1.00e-85 | 264 |
| MS.gene054554.t1 | AT5G17430 | 71.006 | 169 | 49 | 0 | 37 | 205 | 144 | 312 | 3.67e-84 | 263 |
| MS.gene054554.t1 | AT5G17430 | 71.006 | 169 | 49 | 0 | 37 | 205 | 206 | 374 | 6.28e-84 | 265 |
| MS.gene054554.t1 | AT3G20840 | 61.224 | 196 | 73 | 1 | 13 | 205 | 150 | 345 | 1.50e-83 | 263 |
| MS.gene054554.t1 | AT4G37750 | 68.715 | 179 | 54 | 1 | 27 | 205 | 271 | 447 | 2.72e-82 | 259 |
| MS.gene054554.t1 | AT5G65510 | 71.006 | 169 | 49 | 0 | 37 | 205 | 169 | 337 | 7.10e-76 | 239 |
| MS.gene054554.t1 | AT5G65510 | 71.006 | 169 | 49 | 0 | 37 | 205 | 227 | 395 | 1.34e-75 | 241 |
| MS.gene054554.t1 | AT5G65510 | 71.006 | 169 | 49 | 0 | 37 | 205 | 227 | 395 | 1.34e-75 | 241 |
| MS.gene054554.t1 | AT1G16060 | 60.417 | 240 | 92 | 2 | 73 | 311 | 20 | 257 | 1.80e-74 | 231 |
| MS.gene054554.t1 | AT1G79700 | 62.656 | 241 | 60 | 7 | 75 | 314 | 10 | 221 | 5.49e-74 | 228 |
| MS.gene054554.t1 | AT5G10510 | 69.231 | 169 | 52 | 0 | 37 | 205 | 226 | 394 | 1.95e-73 | 236 |
| MS.gene054554.t1 | AT5G10510 | 69.231 | 169 | 52 | 0 | 37 | 205 | 226 | 394 | 1.95e-73 | 236 |
| MS.gene054554.t1 | AT5G10510 | 69.231 | 169 | 52 | 0 | 37 | 205 | 249 | 417 | 4.35e-73 | 236 |
| MS.gene054554.t1 | AT5G10510 | 69.231 | 169 | 52 | 0 | 37 | 205 | 264 | 432 | 4.88e-73 | 236 |
| MS.gene054554.t1 | AT5G10510 | 69.231 | 169 | 52 | 0 | 37 | 205 | 264 | 432 | 4.88e-73 | 236 |
| MS.gene054554.t1 | AT1G79700 | 61.925 | 239 | 61 | 7 | 77 | 314 | 6 | 215 | 6.24e-72 | 223 |
| MS.gene054554.t1 | AT5G10510 | 67.456 | 169 | 52 | 1 | 37 | 205 | 226 | 391 | 5.69e-69 | 224 |
| MS.gene054554.t1 | AT5G65510 | 70.504 | 139 | 41 | 0 | 37 | 175 | 169 | 307 | 3.80e-68 | 216 |
| MS.gene054554.t1 | AT5G10510 | 60.317 | 189 | 55 | 1 | 37 | 205 | 264 | 452 | 7.83e-66 | 218 |
| MS.gene054554.t1 | AT3G54320 | 79.710 | 138 | 28 | 0 | 75 | 212 | 33 | 170 | 1.90e-65 | 210 |
| MS.gene054554.t1 | AT3G54320 | 79.710 | 138 | 28 | 0 | 75 | 212 | 33 | 170 | 1.90e-65 | 210 |
| MS.gene054554.t1 | AT1G16060 | 56.923 | 195 | 81 | 2 | 118 | 311 | 1 | 193 | 2.20e-56 | 182 |
| MS.gene054554.t1 | AT1G16060 | 56.923 | 195 | 81 | 2 | 118 | 311 | 1 | 193 | 2.20e-56 | 182 |
| MS.gene054554.t1 | AT1G16060 | 56.923 | 195 | 81 | 2 | 118 | 311 | 1 | 193 | 2.20e-56 | 182 |
| MS.gene054554.t1 | AT1G16060 | 56.923 | 195 | 81 | 2 | 118 | 311 | 1 | 193 | 2.20e-56 | 182 |
| MS.gene054554.t1 | AT2G41710 | 51.596 | 188 | 82 | 2 | 21 | 208 | 50 | 228 | 9.96e-51 | 174 |
| MS.gene054554.t1 | AT2G41710 | 51.596 | 188 | 82 | 2 | 21 | 208 | 50 | 228 | 1.12e-50 | 174 |
| MS.gene054554.t1 | AT2G41710 | 50.259 | 193 | 82 | 3 | 21 | 208 | 50 | 233 | 3.50e-48 | 167 |
| MS.gene054554.t1 | AT2G28550 | 43.210 | 243 | 111 | 5 | 42 | 282 | 154 | 371 | 3.49e-46 | 162 |
| MS.gene054554.t1 | AT4G36920 | 47.115 | 208 | 87 | 5 | 42 | 237 | 132 | 328 | 4.49e-44 | 156 |
| MS.gene054554.t1 | AT4G36920 | 47.115 | 208 | 87 | 5 | 42 | 237 | 132 | 328 | 4.49e-44 | 156 |
| MS.gene054554.t1 | AT2G41710 | 43.498 | 223 | 82 | 3 | 21 | 208 | 50 | 263 | 1.20e-43 | 156 |
| MS.gene054554.t1 | AT3G54320 | 83.158 | 95 | 16 | 0 | 118 | 212 | 1 | 95 | 8.09e-43 | 149 |
| MS.gene054554.t1 | AT5G67180 | 48.936 | 188 | 76 | 4 | 27 | 205 | 73 | 249 | 1.86e-42 | 149 |
| MS.gene054554.t1 | AT5G67180 | 48.936 | 188 | 76 | 4 | 27 | 205 | 73 | 249 | 2.73e-42 | 148 |
| MS.gene054554.t1 | AT5G67180 | 52.439 | 164 | 67 | 3 | 42 | 205 | 97 | 249 | 6.48e-42 | 149 |
| MS.gene054554.t1 | AT2G28550 | 40.329 | 243 | 103 | 6 | 42 | 282 | 154 | 356 | 5.97e-37 | 137 |
| MS.gene054554.t1 | AT2G28550 | 52.857 | 140 | 55 | 3 | 42 | 181 | 154 | 282 | 1.50e-35 | 132 |
| MS.gene054554.t1 | AT1G16060 | 48.824 | 170 | 84 | 2 | 143 | 311 | 4 | 171 | 1.63e-34 | 125 |
| MS.gene054554.t1 | AT5G67180 | 47.239 | 163 | 66 | 4 | 31 | 184 | 77 | 228 | 5.54e-33 | 122 |
| MS.gene054554.t1 | AT2G28550 | 53.175 | 126 | 48 | 3 | 42 | 167 | 154 | 268 | 1.03e-29 | 114 |
| MS.gene054554.t1 | AT2G28550 | 53.175 | 126 | 48 | 3 | 42 | 167 | 154 | 268 | 1.03e-29 | 114 |
| MS.gene054554.t1 | AT2G28550 | 38.095 | 210 | 98 | 4 | 75 | 282 | 11 | 190 | 2.94e-27 | 108 |
| MS.gene054554.t1 | AT5G60120 | 42.515 | 167 | 70 | 4 | 32 | 198 | 151 | 291 | 2.21e-25 | 106 |
| MS.gene054554.t1 | AT5G60120 | 42.515 | 167 | 70 | 4 | 32 | 198 | 151 | 291 | 2.55e-25 | 106 |
| MS.gene054554.t1 | AT5G60120 | 42.515 | 167 | 70 | 4 | 32 | 198 | 151 | 291 | 2.83e-25 | 105 |
| MS.gene054554.t1 | AT5G60120 | 42.515 | 167 | 70 | 4 | 32 | 198 | 151 | 291 | 2.83e-25 | 105 |
| MS.gene054554.t1 | AT5G60120 | 42.515 | 167 | 70 | 4 | 32 | 198 | 151 | 291 | 2.83e-25 | 105 |
| MS.gene054554.t1 | AT5G60120 | 42.515 | 167 | 70 | 4 | 32 | 198 | 151 | 291 | 3.77e-25 | 105 |
| MS.gene054554.t1 | AT2G39250 | 47.115 | 104 | 45 | 2 | 42 | 145 | 109 | 202 | 2.17e-24 | 99.8 |
| MS.gene054554.t1 | AT2G39250 | 47.115 | 104 | 45 | 2 | 42 | 145 | 109 | 202 | 7.33e-24 | 100 |
| MS.gene054554.t1 | AT3G54990 | 48.598 | 107 | 45 | 2 | 42 | 148 | 123 | 219 | 1.25e-19 | 87.0 |
| MS.gene054554.t1 | AT3G54990 | 48.598 | 107 | 45 | 2 | 42 | 148 | 123 | 219 | 5.51e-19 | 86.7 |
Find 77 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTAACATGTCTTCGAATTT+TGG | 0.115041 | 4.1:+87595466 | None:intergenic |
| CTTTGTGGAGGTGAGTTTCT+TGG | 0.219994 | 4.1:+87602273 | None:intergenic |
| TATTTATACCTTGGAACTTA+TGG | 0.227175 | 4.1:-87599005 | MS.gene054554:intron |
| CACAAAGAAGCTCAGTTTAT+AGG | 0.267290 | 4.1:-87602257 | MS.gene054554:CDS |
| TCGTCGTTGTCTTGTGGTTT+AGG | 0.271322 | 4.1:+87595598 | None:intergenic |
| AATGATGATGACAACATATT+TGG | 0.301779 | 4.1:-87595316 | MS.gene054554:intron |
| AAAATTGTTTGAATATCTTC+TGG | 0.307325 | 4.1:+87595370 | None:intergenic |
| ACAAAGAAGCTCAGTTTATA+GGG | 0.307352 | 4.1:-87602256 | MS.gene054554:CDS |
| TTAATAACTAAACCTTCTTA+AGG | 0.317560 | 4.1:+87601216 | None:intergenic |
| GCTCGAATTGGCAGGGTCTT+CGG | 0.404820 | 4.1:-87599035 | MS.gene054554:CDS |
| ATTTGTGGGATAAGAATTGC+TGG | 0.413847 | 4.1:-87602103 | MS.gene054554:CDS |
| GGCAACAAATATTTATACCT+TGG | 0.417814 | 4.1:-87599014 | MS.gene054554:CDS |
| ACTTGGCAGCATTGAAGTAC+TGG | 0.425678 | 4.1:-87601549 | MS.gene054554:CDS |
| CTTCAATGCTGCCAAGTCAT+AGG | 0.425738 | 4.1:+87601555 | None:intergenic |
| CTATAAACTGAGCTTCTTTG+TGG | 0.430666 | 4.1:+87602258 | None:intergenic |
| AATATATTGGATCCTTAAGA+AGG | 0.444800 | 4.1:-87601228 | MS.gene054554:intron |
| GATGGGAAGCTCGAATTGGC+AGG | 0.455003 | 4.1:-87599043 | MS.gene054554:CDS |
| CAGTCAAAAGAAGAATATAT+TGG | 0.457176 | 4.1:-87601241 | MS.gene054554:CDS |
| GTCGATATGAAGCTCATTTG+TGG | 0.458701 | 4.1:-87602118 | MS.gene054554:CDS |
| CTCGACCATGGTCAACGCTC+TGG | 0.467177 | 4.1:+87590182 | None:intergenic |
| CGTGGAATGGTTGATTTGAC+AGG | 0.483312 | 4.1:+87595403 | None:intergenic |
| AATGAATCACAAAGCAAGAA+AGG | 0.484111 | 4.1:-87602080 | MS.gene054554:CDS |
| TTTCACCGCGGTGGTGGAAG+AGG | 0.486245 | 4.1:+87602314 | None:intergenic |
| ATTATCAAGAGGAGCTCAAA+GGG | 0.490116 | 4.1:-87601273 | MS.gene054554:CDS |
| TCGATATGAAGCTCATTTGT+GGG | 0.492355 | 4.1:-87602117 | MS.gene054554:CDS |
| GGAAGATGGGAAGCTCGAAT+TGG | 0.493895 | 4.1:-87599047 | MS.gene054554:CDS |
| GACACCACCACAATGGAAGA+TGG | 0.496318 | 4.1:-87599061 | MS.gene054554:CDS |
| CTTGGCAGCATTGAAGTACT+GGG | 0.500070 | 4.1:-87601548 | MS.gene054554:CDS |
| TGCTAGCAATAATCAAGAGC+TGG | 0.512163 | 4.1:-87595554 | MS.gene054554:CDS |
| CTGGATCTTAATCAAGAACT+TGG | 0.515101 | 4.1:-87595535 | MS.gene054554:CDS |
| TGCAGCACGTGCCTATGACT+TGG | 0.516501 | 4.1:-87601566 | MS.gene054554:CDS |
| TTTACGTTTCACCGCGGTGG+TGG | 0.525503 | 4.1:+87602308 | None:intergenic |
| ATGGCAGCAATAGAGTATAG+AGG | 0.527216 | 4.1:-87595673 | MS.gene054554:CDS |
| GAAAATTGAGAATTGTGTCT+TGG | 0.528761 | 4.1:+87601524 | None:intergenic |
| GTTAGAAAATTCATCGTCAT+CGG | 0.529129 | 4.1:-87595449 | MS.gene054554:CDS |
| TTACTATCGTCGTTGTCTTG+TGG | 0.533843 | 4.1:+87595592 | None:intergenic |
| AATATTGTTATAGACATCGT+TGG | 0.541172 | 4.1:-87602145 | MS.gene054554:intron |
| TGGAAATGTCCGACGTGGAA+TGG | 0.559065 | 4.1:+87595390 | None:intergenic |
| TGACACAGAGCTTCTCTACA+AGG | 0.563155 | 4.1:-87590206 | MS.gene054554:intron |
| ATGGTTGATTTGACAGGCGG+TGG | 0.564133 | 4.1:+87595409 | None:intergenic |
| ATAAGATCAATCGAAGATGC+TGG | 0.565335 | 4.1:+87595499 | None:intergenic |
| GATCTTAATCAAGAACTTGG+TGG | 0.566882 | 4.1:-87595532 | MS.gene054554:CDS |
| TGTTATAGACATCGTTGGAC+CGG | 0.567027 | 4.1:-87602140 | MS.gene054554:intron |
| CAAATGAGCTTCATATCGAC+CGG | 0.573235 | 4.1:+87602121 | None:intergenic |
| TCAAGAGGAGCTCAAAGGGA+TGG | 0.574531 | 4.1:-87601269 | MS.gene054554:CDS |
| GAGGAGCTCAAAGGGATGGA+AGG | 0.577439 | 4.1:-87601265 | MS.gene054554:CDS |
| CTTCCCATCTTCCATTGTGG+TGG | 0.578979 | 4.1:+87599057 | None:intergenic |
| ACACCACCACAATGGAAGAT+GGG | 0.584570 | 4.1:-87599060 | MS.gene054554:CDS |
| AATTATCAAGAGGAGCTCAA+AGG | 0.585976 | 4.1:-87601274 | MS.gene054554:CDS |
| TGCTGCCATGTCATAAGCTG+TGG | 0.586967 | 4.1:+87595687 | None:intergenic |
| TTAGGTATCAAATTATCAAG+AGG | 0.587787 | 4.1:-87601284 | MS.gene054554:intron |
| GAGCTTCCCATCTTCCATTG+TGG | 0.592861 | 4.1:+87599054 | None:intergenic |
| CAGTTTATAGGGGTGTCACA+AGG | 0.604860 | 4.1:-87602245 | MS.gene054554:intron |
| ACGTTTACGTTTCACCGCGG+TGG | 0.605690 | 4.1:+87602305 | None:intergenic |
| TGGAAGTACCATAAGTTCCA+AGG | 0.606508 | 4.1:+87598997 | None:intergenic |
| TGGCAGCAATAGAGTATAGA+GGG | 0.606682 | 4.1:-87595672 | MS.gene054554:CDS |
| CAAAGCAAGAAAGGAAGACA+AGG | 0.607141 | 4.1:-87602071 | MS.gene054554:intron |
| CTTAATCAAGAACTTGGTGG+TGG | 0.608278 | 4.1:-87595529 | MS.gene054554:CDS |
| TAAACTGAGCTTCTTTGTGG+AGG | 0.608474 | 4.1:+87602261 | None:intergenic |
| ATCAATCGAAGATGCTGGTG+TGG | 0.611842 | 4.1:+87595504 | None:intergenic |
| ACTAAGATCAAAGTTTGTAA+CGG | 0.614633 | 4.1:+87595642 | None:intergenic |
| CAAAATACAGAGGTGTAGCA+AGG | 0.618939 | 4.1:-87600950 | MS.gene054554:intron |
| ATTGGATATGCAGTATACCT+AGG | 0.620057 | 4.1:-87601904 | MS.gene054554:intron |
| ATGGTCAATGCTCTCGACCA+TGG | 0.628729 | 4.1:+87590170 | None:intergenic |
| CAAAGAAGCTCAGTTTATAG+GGG | 0.637455 | 4.1:-87602255 | MS.gene054554:CDS |
| TTCTTCCTCTTCCACCACCG+CGG | 0.640893 | 4.1:-87602319 | MS.gene054554:CDS |
| ATGGGAAGCTCGAATTGGCA+GGG | 0.643491 | 4.1:-87599042 | MS.gene054554:CDS |
| AGCAGCCACAGCTTATGACA+TGG | 0.655956 | 4.1:-87595692 | MS.gene054554:CDS |
| ATGTTTAGACACCACCACAA+TGG | 0.660446 | 4.1:-87599068 | MS.gene054554:intron |
| AAGGTCCAGAGCGTTGACCA+TGG | 0.670531 | 4.1:-87590187 | MS.gene054554:CDS |
| GGAATGGTTGATTTGACAGG+CGG | 0.690559 | 4.1:+87595406 | None:intergenic |
| TCTTCTGGAAATGTCCGACG+TGG | 0.691543 | 4.1:+87595385 | None:intergenic |
| AGAGGAGTCTCAAAATACAG+AGG | 0.710309 | 4.1:-87600960 | MS.gene054554:CDS |
| TTGGCAGCATTGAAGTACTG+GGG | 0.726529 | 4.1:-87601547 | MS.gene054554:CDS |
| TCAAATCAACCATTCCACGT+CGG | 0.751359 | 4.1:-87595399 | MS.gene054554:CDS |
| AACGACGATAGTAACAACCG+TGG | 0.763572 | 4.1:-87595583 | MS.gene054554:CDS |
| TTTACGTTTACGTTTCACCG+CGG | 0.779773 | 4.1:+87602302 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 87590174 | 87602385 | 87590174 | ID=MS.gene054554 |
| chr4.1 | mRNA | 87590174 | 87602385 | 87590174 | ID=MS.gene054554.t1;Parent=MS.gene054554 |
| chr4.1 | exon | 87602246 | 87602385 | 87602246 | ID=MS.gene054554.t1.exon1;Parent=MS.gene054554.t1 |
| chr4.1 | CDS | 87602246 | 87602385 | 87602246 | ID=cds.MS.gene054554.t1;Parent=MS.gene054554.t1 |
| chr4.1 | exon | 87602072 | 87602154 | 87602072 | ID=MS.gene054554.t1.exon2;Parent=MS.gene054554.t1 |
| chr4.1 | CDS | 87602072 | 87602154 | 87602072 | ID=cds.MS.gene054554.t1;Parent=MS.gene054554.t1 |
| chr4.1 | exon | 87601905 | 87601913 | 87601905 | ID=MS.gene054554.t1.exon3;Parent=MS.gene054554.t1 |
| chr4.1 | CDS | 87601905 | 87601913 | 87601905 | ID=cds.MS.gene054554.t1;Parent=MS.gene054554.t1 |
| chr4.1 | exon | 87601522 | 87601610 | 87601522 | ID=MS.gene054554.t1.exon4;Parent=MS.gene054554.t1 |
| chr4.1 | CDS | 87601522 | 87601610 | 87601522 | ID=cds.MS.gene054554.t1;Parent=MS.gene054554.t1 |
| chr4.1 | exon | 87601229 | 87601302 | 87601229 | ID=MS.gene054554.t1.exon5;Parent=MS.gene054554.t1 |
| chr4.1 | CDS | 87601229 | 87601302 | 87601229 | ID=cds.MS.gene054554.t1;Parent=MS.gene054554.t1 |
| chr4.1 | exon | 87600951 | 87601001 | 87600951 | ID=MS.gene054554.t1.exon6;Parent=MS.gene054554.t1 |
| chr4.1 | CDS | 87600951 | 87601001 | 87600951 | ID=cds.MS.gene054554.t1;Parent=MS.gene054554.t1 |
| chr4.1 | exon | 87599006 | 87599082 | 87599006 | ID=MS.gene054554.t1.exon7;Parent=MS.gene054554.t1 |
| chr4.1 | CDS | 87599006 | 87599082 | 87599006 | ID=cds.MS.gene054554.t1;Parent=MS.gene054554.t1 |
| chr4.1 | exon | 87595317 | 87595727 | 87595317 | ID=MS.gene054554.t1.exon8;Parent=MS.gene054554.t1 |
| chr4.1 | CDS | 87595317 | 87595727 | 87595317 | ID=cds.MS.gene054554.t1;Parent=MS.gene054554.t1 |
| chr4.1 | exon | 87590174 | 87590220 | 87590174 | ID=MS.gene054554.t1.exon9;Parent=MS.gene054554.t1 |
| chr4.1 | CDS | 87590174 | 87590220 | 87590174 | ID=cds.MS.gene054554.t1;Parent=MS.gene054554.t1 |
| Gene Sequence |
| Protein sequence |
