Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071577.t1 | XP_003627371.1 | 90.3 | 1186 | 94 | 8 | 1 | 1179 | 82 | 1253 | 0.00E+00 | 1767.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071577.t1 | G7L8C6 | 90.3 | 1186 | 94 | 8 | 1 | 1179 | 82 | 1253 | 0.0e+00 | 1767.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049328 | MS.gene071577 | 0.803442 | 3.48E-49 | -1.69E-46 |
MS.gene049418 | MS.gene071577 | 0.829325 | 5.48E-55 | -1.69E-46 |
MS.gene049989 | MS.gene071577 | 0.807532 | 4.83E-50 | -1.69E-46 |
MS.gene050297 | MS.gene071577 | 0.811388 | 7.18E-51 | -1.69E-46 |
MS.gene051067 | MS.gene071577 | 0.943222 | 1.77E-102 | -1.69E-46 |
MS.gene051087 | MS.gene071577 | 0.80823 | 3.43E-50 | -1.69E-46 |
MS.gene052732 | MS.gene071577 | 0.833186 | 6.16E-56 | -1.69E-46 |
MS.gene053144 | MS.gene071577 | 0.82208 | 2.87E-53 | -1.69E-46 |
MS.gene054584 | MS.gene071577 | 0.830917 | 2.24E-55 | -1.69E-46 |
MS.gene055764 | MS.gene071577 | 0.806119 | 9.60E-50 | -1.69E-46 |
MS.gene056520 | MS.gene071577 | 0.826183 | 3.12E-54 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 286 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATCTTTCCGGGGTTGATTT+TGG | 0.092794 | 8.3:+69632664 | None:intergenic |
TGCCAACCCTGCAGAGTTTA+AGG | 0.106571 | 8.3:-69633345 | MS.gene071577:CDS |
CTTGGGTTTGGGCTTGGTTA+TGG | 0.153240 | 8.3:+69635573 | None:intergenic |
CCATGGGGACACGGAGTAAA+AGG | 0.183987 | 8.3:-69634701 | MS.gene071577:CDS |
TCTTCCGTTGTTGGTTTAAA+TGG | 0.187586 | 8.3:-69634873 | MS.gene071577:CDS |
ATCAAGGTCTTTCCTTAAAA+AGG | 0.187737 | 8.3:-69633234 | MS.gene071577:CDS |
TGTTAATGATAATAATAATT+TGG | 0.201403 | 8.3:-69635177 | MS.gene071577:CDS |
TTGGGTTTGGGCTTGGTTAT+GGG | 0.217295 | 8.3:+69635574 | None:intergenic |
AGCCAGGAATCTGGTAATTC+TGG | 0.228359 | 8.3:-69633011 | MS.gene071577:CDS |
AAGAAATTTCAGTAAATAAA+AGG | 0.229455 | 8.3:+69632409 | None:intergenic |
AATTTCTCGGAGCTTAATAT+TGG | 0.242108 | 8.3:-69634105 | MS.gene071577:CDS |
GGATGTTTGGGCTTGGGTTT+GGG | 0.262884 | 8.3:+69635562 | None:intergenic |
TTTAAGCGATTACTAAAGTT+TGG | 0.269580 | 8.3:-69632630 | MS.gene071577:CDS |
TTCTGGTAGAAAACAGGTTT+TGG | 0.275254 | 8.3:-69634637 | MS.gene071577:CDS |
TGGTTCAGGCACATTGCTTC+TGG | 0.278758 | 8.3:+69634200 | None:intergenic |
TGGATGTTTGGGCTTGGGTT+TGG | 0.282169 | 8.3:+69635561 | None:intergenic |
AGTGCAAATATGAATCTTTC+TGG | 0.285893 | 8.3:-69634654 | MS.gene071577:CDS |
TTTGGGCTTGGGTTTGGGCT+TGG | 0.288759 | 8.3:+69635567 | None:intergenic |
TTCACCATTTCTAAAACTTC+TGG | 0.289259 | 8.3:+69639486 | None:intergenic |
GAGGTTGCCACGTGGATGTT+TGG | 0.289865 | 8.3:+69635549 | None:intergenic |
CAATCTAGAAGACCTGTAAT+AGG | 0.291798 | 8.3:-69634321 | MS.gene071577:CDS |
GATACTTTGCTCCTCTTCAT+TGG | 0.292920 | 8.3:+69633412 | None:intergenic |
GAGTAAAAGGGATGAGATTC+GGG | 0.297497 | 8.3:-69634688 | MS.gene071577:CDS |
GCCACGTGGATGTTTGGGCT+TGG | 0.300860 | 8.3:+69635555 | None:intergenic |
AATCTTCCATATCATATTCT+AGG | 0.311110 | 8.3:+69633126 | None:intergenic |
GAGCATAAACTGAGGGTTCC+TGG | 0.322988 | 8.3:-69634486 | MS.gene071577:CDS |
ATTTCTCGGAGCTTAATATT+GGG | 0.324140 | 8.3:-69634104 | MS.gene071577:CDS |
GACTCATGCGGGTAAGAAAA+AGG | 0.330755 | 8.3:+69632831 | None:intergenic |
ATGAGGCGCGCGTGAGTTCC+AGG | 0.333119 | 8.3:+69632854 | None:intergenic |
GACTCCGTTGAAATTTGATT+TGG | 0.333642 | 8.3:-69633288 | MS.gene071577:CDS |
TAAGGCAAAGTCTGTCTTTA+CGG | 0.334094 | 8.3:-69633376 | MS.gene071577:CDS |
GGTAATTCTGGGTCTGAAAT+TGG | 0.335276 | 8.3:-69632999 | MS.gene071577:CDS |
TGAGTTGAGTCCCCTATTAC+AGG | 0.339701 | 8.3:+69634309 | None:intergenic |
TCTAATTCCTCTTCCGTTGT+TGG | 0.341703 | 8.3:-69634882 | MS.gene071577:CDS |
ACAAGATGAAATTGGAAGTA+TGG | 0.344027 | 8.3:-69633081 | MS.gene071577:CDS |
GAAAACACAAAGCCTTCTTC+TGG | 0.348550 | 8.3:-69633488 | MS.gene071577:CDS |
CCTGAACCAGCTGTGAGTTC+GGG | 0.351175 | 8.3:-69634186 | MS.gene071577:CDS |
TTTCTCAAATCAGAGAAGTT+TGG | 0.352015 | 8.3:+69633512 | None:intergenic |
GTTTATTATTACGTCGTTGT+TGG | 0.353074 | 8.3:+69635487 | None:intergenic |
GACCTTGATGATTGATCATA+AGG | 0.355912 | 8.3:+69633248 | None:intergenic |
CGGTGGATAGTCAGAATTAT+GGG | 0.357242 | 8.3:-69634143 | MS.gene071577:CDS |
AGCTGAAGCTTTGAAGAATC+AGG | 0.361383 | 8.3:-69634796 | MS.gene071577:CDS |
TCTTGTTGAGTAATGAGTTC+TGG | 0.362227 | 8.3:+69635686 | None:intergenic |
AAAGTTGATGGAAATGCATT+AGG | 0.362668 | 8.3:+69632924 | None:intergenic |
TTCTTCTGACGTGGGGTTCA+AGG | 0.362962 | 8.3:-69635126 | MS.gene071577:CDS |
AGGTTGCCACGTGGATGTTT+GGG | 0.365025 | 8.3:+69635550 | None:intergenic |
TGTTGATGCACGCGTAGAAC+AGG | 0.367067 | 8.3:-69634280 | MS.gene071577:CDS |
CCTACACCGTTGAAAGTTGA+TGG | 0.367258 | 8.3:+69632912 | None:intergenic |
ACAGGGGAACAAGATGAAAT+TGG | 0.368444 | 8.3:-69633089 | MS.gene071577:CDS |
GAATTCTCGTTCCCTTATCC+AGG | 0.373969 | 8.3:-69632760 | MS.gene071577:CDS |
CCTAACAGAAATGTGTCTTC+AGG | 0.374477 | 8.3:-69633611 | MS.gene071577:CDS |
GCTTCTATAGATTCTCCTAT+TGG | 0.375336 | 8.3:-69632795 | MS.gene071577:CDS |
TTGGGCTTGGTTATGGGCTT+CGG | 0.375633 | 8.3:+69635580 | None:intergenic |
AAGGCAGAGTAAAGGAAATC+AGG | 0.377479 | 8.3:-69634562 | MS.gene071577:CDS |
CGCTGATGCACGTGTGGAAC+AGG | 0.380367 | 8.3:-69634430 | MS.gene071577:CDS |
GAAGAGGAATGCTAAACTTC+AGG | 0.380932 | 8.3:-69634043 | MS.gene071577:CDS |
AATGACGATGTTAAGTTTGA+TGG | 0.381260 | 8.3:-69635035 | MS.gene071577:CDS |
AATCTAGAAGACCTGTAATA+GGG | 0.383907 | 8.3:-69634320 | MS.gene071577:CDS |
CCACGTGGATGTTTGGGCTT+GGG | 0.384132 | 8.3:+69635556 | None:intergenic |
CCTGAAGACACATTTCTGTT+AGG | 0.387490 | 8.3:+69633611 | None:intergenic |
CATCATTCTCACCCTGGATA+AGG | 0.388526 | 8.3:+69632748 | None:intergenic |
TTAAGCGATTACTAAAGTTT+GGG | 0.392620 | 8.3:-69632629 | MS.gene071577:CDS |
GGACAGAGACTTTGGCTGAT+TGG | 0.392953 | 8.3:-69632593 | MS.gene071577:CDS |
CTCCTATTGGTAGCCCTGCT+TGG | 0.398520 | 8.3:-69632782 | MS.gene071577:CDS |
TTCTGAAGGAGATGATGATA+TGG | 0.400701 | 8.3:-69632556 | MS.gene071577:CDS |
AAGGAAAAGATGATCTCAAA+TGG | 0.401892 | 8.3:+69634823 | None:intergenic |
ACGGTGGATAGTCAGAATTA+TGG | 0.404942 | 8.3:-69634144 | MS.gene071577:CDS |
GAATCTTTCTGGTAGAAAAC+AGG | 0.406049 | 8.3:-69634643 | MS.gene071577:CDS |
ACCCAGAATTACCAGATTCC+TGG | 0.409590 | 8.3:+69633009 | None:intergenic |
TTGAGTTGAGAGACAGTGTA+AGG | 0.409901 | 8.3:+69636710 | None:intergenic |
TAGGTCATTGAATTCTTTCT+CGG | 0.411868 | 8.3:+69633145 | None:intergenic |
TGAGTTGAATCCACTATTCC+AGG | 0.412186 | 8.3:+69634384 | None:intergenic |
TGTCTGTTCTTTATTACTGC+TGG | 0.413181 | 8.3:+69635418 | None:intergenic |
CAATGACCTAGAATATGATA+TGG | 0.416299 | 8.3:-69633132 | MS.gene071577:CDS |
GGCACATTGCTTCTGGAAGA+TGG | 0.416791 | 8.3:+69634207 | None:intergenic |
TGATGCAGAGATGTCTCAAT+TGG | 0.418080 | 8.3:-69639457 | MS.gene071577:CDS |
TTCAAAGCTTCAGCTTCTAA+AGG | 0.418516 | 8.3:+69634804 | None:intergenic |
CCCGAACTCACAGCTGGTTC+AGG | 0.420312 | 8.3:+69634186 | None:intergenic |
GGAGTAAAAGGGATGAGATT+CGG | 0.421145 | 8.3:-69634689 | MS.gene071577:CDS |
TATGCTAATGCATCAGCATC+TGG | 0.422062 | 8.3:-69636740 | MS.gene071577:CDS |
TACACATGTAACGGTACCTT+TGG | 0.422345 | 8.3:-69634601 | MS.gene071577:CDS |
ATCATTCTCACCCTGGATAA+GGG | 0.424961 | 8.3:+69632749 | None:intergenic |
TCATTCTGAAGGGAATCTAT+AGG | 0.426226 | 8.3:+69633707 | None:intergenic |
TGTTCTACGCGTGCATCAAC+AGG | 0.426291 | 8.3:+69634282 | None:intergenic |
TCAGCTCAGTTTGAAGGTAG+TGG | 0.430622 | 8.3:-69634942 | MS.gene071577:CDS |
TTGTCCTCTTTGAACTCAGA+TGG | 0.430904 | 8.3:-69633320 | MS.gene071577:CDS |
GCCTGAACCAGCTGTGAGTT+CGG | 0.430971 | 8.3:-69634187 | MS.gene071577:CDS |
AGCATAAACTGAGGGTTCCT+GGG | 0.433064 | 8.3:-69634485 | MS.gene071577:CDS |
GGTTATAGACCCTGAAAACT+TGG | 0.434505 | 8.3:+69633933 | None:intergenic |
GAAACCAGTACCTGCTAGTT+CGG | 0.437323 | 8.3:-69634730 | MS.gene071577:CDS |
GTTAGTCTGAGCCAGGAATC+TGG | 0.439275 | 8.3:-69633020 | MS.gene071577:CDS |
AGGGTTCCTGGGGATCAATC+TGG | 0.443242 | 8.3:-69634474 | MS.gene071577:CDS |
GACAAATCCTTAAACTCTGC+AGG | 0.444442 | 8.3:+69633338 | None:intergenic |
CTGTTGAGAGTCCTGTGTCC+TGG | 0.445287 | 8.3:-69632872 | MS.gene071577:CDS |
TATGGACGATGGCCGAGATC+TGG | 0.447248 | 8.3:-69632538 | MS.gene071577:CDS |
AAGATAGTCTTGAGCGGAGT+AGG | 0.448279 | 8.3:-69633969 | MS.gene071577:CDS |
CTGGAAAGCCGGTCGAGCTT+CGG | 0.449448 | 8.3:-69635286 | MS.gene071577:CDS |
TGGAACAGAATCAGAGAGTA+AGG | 0.450433 | 8.3:-69634581 | MS.gene071577:CDS |
TCAGGTACACCTCGCACAAC+AGG | 0.457937 | 8.3:-69633593 | MS.gene071577:CDS |
AGGAAAAGATGATCTCAAAT+GGG | 0.458016 | 8.3:+69634824 | None:intergenic |
GTGTCAATGTCACGTCCATC+TGG | 0.458396 | 8.3:-69633569 | MS.gene071577:CDS |
CTTCATCCTCTTCATTCTGA+AGG | 0.461063 | 8.3:+69633696 | None:intergenic |
AACTCGTGGGACAGAGACTT+TGG | 0.462395 | 8.3:-69632601 | MS.gene071577:CDS |
GCCAGGAATCTGGTAATTCT+GGG | 0.462442 | 8.3:-69633010 | MS.gene071577:CDS |
AATGTCTTATTTCAGGGGAC+AGG | 0.463253 | 8.3:-69639317 | MS.gene071577:intron |
AGCTTTGAAGAATCAGGTTA+AGG | 0.464390 | 8.3:-69634790 | MS.gene071577:CDS |
CAACATGCTTGAGTACCTCT+TGG | 0.465017 | 8.3:-69632377 | MS.gene071577:CDS |
TGCTGTAAGGCAAAATTTCT+CGG | 0.467310 | 8.3:-69634118 | MS.gene071577:CDS |
ATGCTAAACTTCAGGAAGAA+TGG | 0.467513 | 8.3:-69634035 | MS.gene071577:CDS |
GAAGAATCAGGTTAAGGAAG+AGG | 0.467828 | 8.3:-69634784 | MS.gene071577:CDS |
GTCTAGAAGACCTGGAATAG+TGG | 0.468174 | 8.3:-69634394 | MS.gene071577:CDS |
TTCCAAGCAGGGCTACCAAT+AGG | 0.468469 | 8.3:+69632780 | None:intergenic |
AAGCAAACCAACCCGCTCTC+AGG | 0.468923 | 8.3:-69633462 | MS.gene071577:CDS |
CCCCGGAAAGATGTTGCAAA+AGG | 0.469597 | 8.3:-69632654 | MS.gene071577:CDS |
GAAGAATTAGCAACAAGATA+AGG | 0.470636 | 8.3:+69632687 | None:intergenic |
AGACTTGAGGAAGTCGAGAA+TGG | 0.471343 | 8.3:-69632499 | MS.gene071577:CDS |
GGGGATGGAACAAGAGTAAT+CGG | 0.473196 | 8.3:-69637977 | MS.gene071577:CDS |
CGCCCTGCCTGTGCCGGCGT+TGG | 0.475839 | 8.3:+69635365 | None:intergenic |
CAGGACACAGGACTCTCAAC+AGG | 0.476046 | 8.3:+69632873 | None:intergenic |
CTTGTTCCCCTGTGGCCGTA+TGG | 0.477358 | 8.3:+69633099 | None:intergenic |
TAGAGAGTTGAAGGTGGTGA+AGG | 0.477976 | 8.3:+69635520 | None:intergenic |
ATTAAAAGCACTATCTTCAA+TGG | 0.481053 | 8.3:+69633058 | None:intergenic |
TCTCAACGCGCAGATAAACT+TGG | 0.481664 | 8.3:-69633889 | MS.gene071577:CDS |
ATGACGATGTTAAGTTTGAT+GGG | 0.482204 | 8.3:-69635034 | MS.gene071577:CDS |
ATGGCCGAGATCTGGCCAAC+CGG | 0.483788 | 8.3:-69632530 | MS.gene071577:CDS |
TTGTCTCTTCGTTTGCCAGA+TGG | 0.487249 | 8.3:+69633554 | None:intergenic |
TCCTCAAGTCTTCTGATGAC+CGG | 0.488254 | 8.3:+69632511 | None:intergenic |
TCACCAACGCCGGCACAGGC+AGG | 0.490050 | 8.3:-69635368 | MS.gene071577:CDS |
TGTTCCGAACTAGCAGGTAC+TGG | 0.490653 | 8.3:+69634726 | None:intergenic |
GACTTGAGGAAGTCGAGAAT+GGG | 0.491125 | 8.3:-69632498 | MS.gene071577:CDS |
GACATTCTCCGAAGCTCGAC+CGG | 0.494736 | 8.3:+69635278 | None:intergenic |
CACAGGTTTGTGCGGTATGT+TGG | 0.496046 | 8.3:-69639513 | None:intergenic |
GGTGCCGTCGTTATTGCTGT+TGG | 0.497703 | 8.3:+69635439 | None:intergenic |
AAGGTTGTGAAAACTGATCA+AGG | 0.498183 | 8.3:-69635152 | MS.gene071577:CDS |
GATTCATTCCATACGGCCAC+AGG | 0.500497 | 8.3:-69633107 | MS.gene071577:CDS |
GAGATTGAGTGCAGTTAGGC+AGG | 0.501270 | 8.3:-69636777 | MS.gene071577:CDS |
GTGGTGGTGCATTCAAATCA+AGG | 0.504288 | 8.3:-69634917 | MS.gene071577:CDS |
ATGAAAAGTACATGAAGAAG+AGG | 0.505881 | 8.3:-69634059 | MS.gene071577:CDS |
AAGGTTCTTCTTCATCAGAT+AGG | 0.506149 | 8.3:-69635091 | MS.gene071577:CDS |
CAAGGGTCTTCTTCTGACGT+GGG | 0.508947 | 8.3:-69635134 | MS.gene071577:CDS |
GGTGATGACGGCAACGGCGT+CGG | 0.509621 | 8.3:+69635386 | None:intergenic |
TATCAGGATGAAAGCTTCAA+TGG | 0.510924 | 8.3:-69633177 | MS.gene071577:CDS |
CACTACTACCACTCCACCGC+CGG | 0.511212 | 8.3:+69635243 | None:intergenic |
GAATTTGCTCCAGGCGGGGA+TGG | 0.511390 | 8.3:-69637992 | MS.gene071577:intron |
ATCCTTAAACTCTGCAGGGT+TGG | 0.511571 | 8.3:+69633343 | None:intergenic |
TCATTGAAGCTTTCGTCAGA+AGG | 0.512321 | 8.3:+69632459 | None:intergenic |
ATAGTTTCTCACCTGAGAGC+GGG | 0.512328 | 8.3:+69633451 | None:intergenic |
CTTTCAACGGTGTAGGATCT+CGG | 0.512825 | 8.3:-69632905 | MS.gene071577:CDS |
ATGTGAGATTGAGTGCAGTT+AGG | 0.513110 | 8.3:-69636781 | MS.gene071577:CDS |
AGTCGTCGCCCTGCCTGTGC+CGG | 0.513589 | 8.3:+69635359 | None:intergenic |
GTATCAAGGAAGAGAAGCTA+AGG | 0.515763 | 8.3:-69633394 | MS.gene071577:CDS |
TGGAAAGGTTAGTCTGAGCC+AGG | 0.515819 | 8.3:-69633027 | MS.gene071577:CDS |
GCAGTACCAGATTGATCCCC+AGG | 0.517831 | 8.3:+69634468 | None:intergenic |
TGTCCTCTTTGAACTCAGAT+GGG | 0.518994 | 8.3:-69633319 | MS.gene071577:CDS |
GGTTTGCTTACTCCAGAAGA+AGG | 0.522653 | 8.3:+69633476 | None:intergenic |
TGTTCCACACGTGCATCAGC+GGG | 0.524887 | 8.3:+69634432 | None:intergenic |
TGGTTGCTACATCACTTGGT+AGG | 0.525917 | 8.3:-69634992 | MS.gene071577:CDS |
ATGACCGGTTGGCCAGATCT+CGG | 0.526896 | 8.3:+69632526 | None:intergenic |
TGAAGAGGAGCAAAGTATCA+AGG | 0.528530 | 8.3:-69633408 | MS.gene071577:CDS |
TGTTCTACGTGCACATCAGC+AGG | 0.530794 | 8.3:+69634357 | None:intergenic |
ATGGTGCTTCAAAGCAAAGT+AGG | 0.531251 | 8.3:-69633643 | MS.gene071577:CDS |
CCATCAACTTTCAACGGTGT+AGG | 0.533225 | 8.3:-69632912 | MS.gene071577:CDS |
TTCTTCGTCTTCGTTATCGA+TGG | 0.536054 | 8.3:+69635604 | None:intergenic |
TCAAGGGTCTTCTTCTGACG+TGG | 0.536315 | 8.3:-69635135 | MS.gene071577:CDS |
CAGTTTGAAGGTAGTGGTGG+TGG | 0.536443 | 8.3:-69634936 | MS.gene071577:CDS |
CTGTTCCACACGTGCATCAG+CGG | 0.537964 | 8.3:+69634431 | None:intergenic |
GGAGTTGAGTCTCCTACTCC+AGG | 0.540927 | 8.3:+69634234 | None:intergenic |
GATGATTGATCATAAGGGCT+CGG | 0.541574 | 8.3:+69633254 | None:intergenic |
ACAGATCAGAGAAGGAAGCT+AGG | 0.541744 | 8.3:-69634005 | MS.gene071577:CDS |
GTTACGTTGTAGAGAGTTGA+AGG | 0.544461 | 8.3:+69635511 | None:intergenic |
ATTTAAACCAACAACGGAAG+AGG | 0.545934 | 8.3:+69634875 | None:intergenic |
AGATAGTCTTGAGCGGAGTA+GGG | 0.546356 | 8.3:-69633968 | MS.gene071577:CDS |
TGGTAGTTTACTTCAAGCGA+TGG | 0.547556 | 8.3:+69636663 | None:intergenic |
ACTCTCTGATTCTGTTCCAA+AGG | 0.549401 | 8.3:+69634585 | None:intergenic |
ATCTCTGTTACAACTTCTGA+AGG | 0.549505 | 8.3:-69632570 | MS.gene071577:CDS |
ATGGTTTGTTCCGAACTAGC+AGG | 0.550367 | 8.3:+69634720 | None:intergenic |
TTCATCCTCTTCATTCTGAA+GGG | 0.551403 | 8.3:+69633697 | None:intergenic |
AGTTTGGTACAGACTGCGCA+AGG | 0.553497 | 8.3:+69633528 | None:intergenic |
TGAAGCTTTCGTCAGAAGGA+TGG | 0.553546 | 8.3:+69632463 | None:intergenic |
ACCTTGATGATTGATCATAA+GGG | 0.555139 | 8.3:+69633249 | None:intergenic |
TTTCTCGGAGCTTAATATTG+GGG | 0.555166 | 8.3:-69634103 | MS.gene071577:CDS |
CAGAGAGTAAGGCAGAGTAA+AGG | 0.556082 | 8.3:-69634570 | MS.gene071577:CDS |
CAACGGTGTAGGATCTCGGC+AGG | 0.557408 | 8.3:-69632901 | MS.gene071577:CDS |
GCATTTCCATCAACTTTCAA+CGG | 0.557412 | 8.3:-69632918 | MS.gene071577:CDS |
AAAAGAAAATACTGGAAAGC+CGG | 0.557438 | 8.3:-69635297 | MS.gene071577:CDS |
GGTTGCTACATCACTTGGTA+GGG | 0.557575 | 8.3:-69634991 | MS.gene071577:CDS |
AAAACCAGGTCCTGCAGTGT+TGG | 0.559837 | 8.3:+69633211 | None:intergenic |
AGGGAACGAGAATTCCAAGC+AGG | 0.560307 | 8.3:+69632768 | None:intergenic |
CAAGTCTTCTGATGACCGGT+TGG | 0.561681 | 8.3:+69632515 | None:intergenic |
TGTGCCGGCGTTGGTGATGA+CGG | 0.562230 | 8.3:+69635374 | None:intergenic |
ATAACCAGACAAAATTCAGC+AGG | 0.562447 | 8.3:-69633916 | MS.gene071577:CDS |
CATGAGCATTGACGCTAGCA+TGG | 0.566400 | 8.3:-69635219 | MS.gene071577:CDS |
TGCTAGTTCGGAACAAACCA+TGG | 0.567133 | 8.3:-69634718 | MS.gene071577:CDS |
AGAGAAGGAAGCTAGGATGA+AGG | 0.567425 | 8.3:-69633998 | MS.gene071577:CDS |
AACTCACAGTCTAGAAGACC+TGG | 0.568801 | 8.3:-69634402 | MS.gene071577:CDS |
GGTAGTTTACTTCAAGCGAT+GGG | 0.569272 | 8.3:+69636664 | None:intergenic |
TTGAGACATCTCTGCATCAA+AGG | 0.569583 | 8.3:+69639461 | None:intergenic |
TTAGTCCCCGAACTCACAGC+TGG | 0.572238 | 8.3:+69634180 | None:intergenic |
TAGCAGAAGCACCAATGAAG+AGG | 0.572636 | 8.3:-69633423 | MS.gene071577:CDS |
TGATAATAATAATTTGGACA+AGG | 0.575415 | 8.3:-69635171 | MS.gene071577:CDS |
GGCGTTGGTGATGACGGCAA+CGG | 0.575419 | 8.3:+69635380 | None:intergenic |
TTGCTTCTGGAAGATGGCTG+AGG | 0.575947 | 8.3:+69634213 | None:intergenic |
TTTGAAGGTAGTGGTGGTGG+TGG | 0.577036 | 8.3:-69634933 | MS.gene071577:CDS |
CGGAACAAACCATGGGGACA+CGG | 0.578400 | 8.3:-69634710 | MS.gene071577:CDS |
TTCGTTATCGATGGACATGT+CGG | 0.579689 | 8.3:+69635613 | None:intergenic |
CATGGGGACACGGAGTAAAA+GGG | 0.583032 | 8.3:-69634700 | MS.gene071577:CDS |
GAGTTTGAACAGATCAGAGA+AGG | 0.583828 | 8.3:-69634013 | MS.gene071577:CDS |
ATAGCACTGCCTACAAAACC+AGG | 0.584700 | 8.3:+69633197 | None:intergenic |
AATTCTCGTTCCCTTATCCA+GGG | 0.584993 | 8.3:-69632759 | MS.gene071577:CDS |
GTCATCACCAACGCCGGCAC+AGG | 0.585521 | 8.3:-69635372 | MS.gene071577:CDS |
TGCACGGAAGATATATTCGC+AGG | 0.588721 | 8.3:-69639430 | MS.gene071577:intron |
TATGGAAGATTCATTCCATA+CGG | 0.589840 | 8.3:-69633114 | MS.gene071577:CDS |
TGTACAGGAAGGAACTGCTA+AGG | 0.589887 | 8.3:-69636811 | MS.gene071577:intron |
AGATTCCCTTCAGAATGAAG+AGG | 0.590406 | 8.3:-69633702 | MS.gene071577:CDS |
TCTTCCAAATCAAATTTCAA+CGG | 0.592536 | 8.3:+69633284 | None:intergenic |
AATGTGGTTGCTACATCACT+TGG | 0.594624 | 8.3:-69634996 | MS.gene071577:CDS |
TCGAGAATGGGATTGTCTCA+TGG | 0.596972 | 8.3:-69632486 | MS.gene071577:CDS |
CACCAACGCCGGCACAGGCA+GGG | 0.597853 | 8.3:-69635367 | MS.gene071577:CDS |
CAATGTCAGAAGACTCATGC+GGG | 0.600644 | 8.3:+69632820 | None:intergenic |
ATCTAGAAGACCTGTAATAG+GGG | 0.600753 | 8.3:-69634319 | MS.gene071577:CDS |
GCTCAGTTTGAAGGTAGTGG+TGG | 0.600840 | 8.3:-69634939 | MS.gene071577:CDS |
AAGGCCAACACTGCAGGACC+TGG | 0.603051 | 8.3:-69633215 | MS.gene071577:CDS |
GCGCGTGAGTTCCAGGACAC+AGG | 0.605108 | 8.3:+69632861 | None:intergenic |
TTCAAGGATCATCAACTGAA+AGG | 0.605231 | 8.3:-69635110 | MS.gene071577:CDS |
AAGGGTCTTCTTCTGACGTG+GGG | 0.606885 | 8.3:-69635133 | MS.gene071577:CDS |
AGAATGATGCTGCTCGAATG+AGG | 0.608638 | 8.3:-69632734 | MS.gene071577:CDS |
TTTGGTACAGACTGCGCAAG+GGG | 0.609859 | 8.3:+69633530 | None:intergenic |
GCCCTTATGATCAATCATCA+AGG | 0.612177 | 8.3:-69633250 | MS.gene071577:CDS |
GCTAGTTCGGAACAAACCAT+GGG | 0.613627 | 8.3:-69634717 | MS.gene071577:CDS |
AATTCACAGTCTAGAAGACC+TGG | 0.613652 | 8.3:-69634252 | MS.gene071577:CDS |
TTTCTCACCTGAGAGCGGGT+TGG | 0.616190 | 8.3:+69633455 | None:intergenic |
GACTAAGTCACTTATGAAGA+CGG | 0.616319 | 8.3:-69634163 | MS.gene071577:CDS |
ATTCATTCCATACGGCCACA+GGG | 0.617363 | 8.3:-69633106 | MS.gene071577:CDS |
CAGTCTAGAAGACCTGGAGT+AGG | 0.617843 | 8.3:-69634246 | MS.gene071577:CDS |
CTGAACCAGCTGTGAGTTCG+GGG | 0.618997 | 8.3:-69634185 | MS.gene071577:CDS |
TGAGCCCGCTGATGCACGTG+TGG | 0.623663 | 8.3:-69634436 | MS.gene071577:CDS |
CATAGTTTCTCACCTGAGAG+CGG | 0.624037 | 8.3:+69633450 | None:intergenic |
GAGCAGCATCATTCTCACCC+TGG | 0.624179 | 8.3:+69632742 | None:intergenic |
AATTTCATCTTGTTCCCCTG+TGG | 0.625503 | 8.3:+69633091 | None:intergenic |
ACAAATCCTTAAACTCTGCA+GGG | 0.627468 | 8.3:+69633339 | None:intergenic |
AACACCATTTAAACCAACAA+CGG | 0.627589 | 8.3:+69634869 | None:intergenic |
GTACAGGAAGGAACTGCTAA+GGG | 0.628039 | 8.3:-69636810 | MS.gene071577:intron |
TCAGGATAGTACACATGTAA+CGG | 0.628758 | 8.3:-69634610 | MS.gene071577:CDS |
AATCCCATCTGAGTTCAAAG+AGG | 0.629072 | 8.3:+69633316 | None:intergenic |
TGTCTCAATTGGAAGCTGCA+CGG | 0.630977 | 8.3:-69639446 | MS.gene071577:CDS |
ACCGGTCATCAGAAGACTTG+AGG | 0.631776 | 8.3:-69632512 | MS.gene071577:CDS |
ACCAGACAAAATTCAGCAGG+AGG | 0.636055 | 8.3:-69633913 | MS.gene071577:CDS |
GTTGATGCACGCGTAGAACA+GGG | 0.637485 | 8.3:-69634279 | MS.gene071577:CDS |
AGGTTGTGAAAACTGATCAA+GGG | 0.642830 | 8.3:-69635151 | MS.gene071577:CDS |
ATTCTTCCCAAAATCAACCC+CGG | 0.643884 | 8.3:-69632671 | MS.gene071577:CDS |
GGGATCAATCTGGTACTGCA+CGG | 0.644151 | 8.3:-69634464 | MS.gene071577:CDS |
AGTTTAAACTTATATCCAAG+AGG | 0.644162 | 8.3:+69632362 | None:intergenic |
GGTGGATAGTCAGAATTATG+GGG | 0.644647 | 8.3:-69634142 | MS.gene071577:CDS |
AATATTGGGGATGAATCTAG+AGG | 0.645498 | 8.3:-69634090 | MS.gene071577:CDS |
GTTTGGTACAGACTGCGCAA+GGG | 0.646573 | 8.3:+69633529 | None:intergenic |
AATGAGCTGTTCAACGAACA+CGG | 0.648737 | 8.3:-69632435 | MS.gene071577:CDS |
GACGATGTTAAGTTTGATGG+GGG | 0.649104 | 8.3:-69635032 | MS.gene071577:CDS |
ATCAAATATAAAGAGAGACC+AGG | 0.649669 | 8.3:-69633857 | MS.gene071577:intron |
TGACGATGTTAAGTTTGATG+GGG | 0.649774 | 8.3:-69635033 | MS.gene071577:CDS |
GCATAAACTGAGGGTTCCTG+GGG | 0.651161 | 8.3:-69634484 | MS.gene071577:CDS |
GGAAAAGATGATCTCAAATG+GGG | 0.652354 | 8.3:+69634825 | None:intergenic |
GGGGACAGGAGATCAGCGCA+TGG | 0.661082 | 8.3:-69639303 | MS.gene071577:CDS |
GGGAACGAGAATTCCAAGCA+GGG | 0.661444 | 8.3:+69632769 | None:intergenic |
TGGTGGTGCATTCAAATCAA+GGG | 0.664398 | 8.3:-69634916 | MS.gene071577:CDS |
ATGATGCTCACAGGTTTGTG+CGG | 0.666085 | 8.3:-69639521 | None:intergenic |
GGGTGTGAAAAGTAATAATG+TGG | 0.669968 | 8.3:-69635012 | MS.gene071577:CDS |
GCATGACGAGTTGAAGCTGA+AGG | 0.672898 | 8.3:-69634535 | MS.gene071577:CDS |
CTGAAATTGGTGATTCTACG+AGG | 0.677991 | 8.3:-69632986 | MS.gene071577:CDS |
GTTGCCGTCATCACCAACGC+CGG | 0.684269 | 8.3:-69635378 | MS.gene071577:CDS |
AAAAGGGATGAGATTCGGGG+TGG | 0.686111 | 8.3:-69634684 | MS.gene071577:CDS |
ATTGACACTCCTGTTGTGCG+AGG | 0.689849 | 8.3:+69633584 | None:intergenic |
CAATGCAAGATAGTCTTGAG+CGG | 0.692628 | 8.3:-69633975 | MS.gene071577:CDS |
AAGATCTTGAATGACTACGG+TGG | 0.694140 | 8.3:+69634967 | None:intergenic |
GTGGATAGTCAGAATTATGG+GGG | 0.696577 | 8.3:-69634141 | MS.gene071577:CDS |
TTCATTCCATACGGCCACAG+GGG | 0.700611 | 8.3:-69633105 | MS.gene071577:CDS |
GATCAGCGCATGGATTCACA+AGG | 0.700761 | 8.3:-69639293 | MS.gene071577:intron |
TAAGTCACTTATGAAGACGG+TGG | 0.702124 | 8.3:-69634160 | MS.gene071577:CDS |
AGTAAAAGGGATGAGATTCG+GGG | 0.702463 | 8.3:-69634687 | MS.gene071577:CDS |
GAAGCCAACAGCAATAACGA+CGG | 0.709829 | 8.3:-69635443 | MS.gene071577:CDS |
ACGTTGTAGAGAGTTGAAGG+TGG | 0.713152 | 8.3:+69635514 | None:intergenic |
CAAGACGACGAAAAGTCACG+TGG | 0.713674 | 8.3:-69635668 | MS.gene071577:CDS |
GGAGATGATGATATGGACGA+TGG | 0.713828 | 8.3:-69632549 | MS.gene071577:CDS |
CCCAAGCCCAAACATCCACG+TGG | 0.722286 | 8.3:-69635556 | MS.gene071577:CDS |
TCAATGTCAGAAGACTCATG+CGG | 0.734206 | 8.3:+69632819 | None:intergenic |
TGGAACAAGAGTAATCGGAG+CGG | 0.770089 | 8.3:-69637972 | MS.gene071577:CDS |
CTAGTTCGGAACAAACCATG+GGG | 0.780495 | 8.3:-69634716 | MS.gene071577:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 69632371 | 69639530 | 69632371 | ID=MS.gene071577 |
chr8.3 | mRNA | 69632371 | 69639530 | 69632371 | ID=MS.gene071577.t1;Parent=MS.gene071577 |
chr8.3 | exon | 69639431 | 69639530 | 69639431 | ID=MS.gene071577.t1.exon1;Parent=MS.gene071577.t1 |
chr8.3 | CDS | 69639431 | 69639530 | 69639431 | ID=cds.MS.gene071577.t1;Parent=MS.gene071577.t1 |
chr8.3 | exon | 69639294 | 69639324 | 69639294 | ID=MS.gene071577.t1.exon2;Parent=MS.gene071577.t1 |
chr8.3 | CDS | 69639294 | 69639324 | 69639294 | ID=cds.MS.gene071577.t1;Parent=MS.gene071577.t1 |
chr8.3 | exon | 69637959 | 69638001 | 69637959 | ID=MS.gene071577.t1.exon3;Parent=MS.gene071577.t1 |
chr8.3 | CDS | 69637959 | 69638001 | 69637959 | ID=cds.MS.gene071577.t1;Parent=MS.gene071577.t1 |
chr8.3 | exon | 69636674 | 69636826 | 69636674 | ID=MS.gene071577.t1.exon4;Parent=MS.gene071577.t1 |
chr8.3 | CDS | 69636674 | 69636826 | 69636674 | ID=cds.MS.gene071577.t1;Parent=MS.gene071577.t1 |
chr8.3 | exon | 69633858 | 69635748 | 69633858 | ID=MS.gene071577.t1.exon5;Parent=MS.gene071577.t1 |
chr8.3 | CDS | 69633858 | 69635748 | 69633858 | ID=cds.MS.gene071577.t1;Parent=MS.gene071577.t1 |
chr8.3 | exon | 69632371 | 69633732 | 69632371 | ID=MS.gene071577.t1.exon6;Parent=MS.gene071577.t1 |
chr8.3 | CDS | 69632371 | 69633732 | 69632371 | ID=cds.MS.gene071577.t1;Parent=MS.gene071577.t1 |
Gene Sequence |
Protein sequence |