AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene056520


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056520.t1 MTR_8g071000 97.333 600 14 1 1 598 1 600 0.0 1210
MS.gene056520.t1 MTR_3g010190 67.617 491 147 7 14 495 21 508 0.0 642
MS.gene056520.t1 MTR_1g022480 44.152 607 297 13 14 598 31 617 6.04e-158 467
MS.gene056520.t1 MTR_1g022480 44.298 605 297 13 14 598 31 615 6.25e-158 467
MS.gene056520.t1 MTR_1g022480 43.791 612 297 14 14 598 31 622 5.59e-155 459
MS.gene056520.t1 MTR_3g117100 42.669 607 309 13 14 598 30 619 5.49e-150 446
MS.gene056520.t1 MTR_7g056587 42.691 602 288 15 11 594 17 579 1.01e-140 421
MS.gene056520.t1 MTR_7g056587 42.691 602 288 15 11 594 25 587 1.62e-140 421
MS.gene056520.t1 MTR_7g056587 42.691 602 288 15 11 594 25 587 2.26e-140 421
MS.gene056520.t1 MTR_7g056587 42.691 602 288 15 11 594 39 601 3.57e-140 421
MS.gene056520.t1 MTR_4g070810 41.267 584 315 10 29 598 43 612 4.71e-140 421
MS.gene056520.t1 MTR_3g112150 43.147 591 294 11 14 596 13 569 6.66e-136 409
MS.gene056520.t1 MTR_1g022480 43.462 520 261 10 93 598 31 531 2.19e-135 406
MS.gene056520.t1 MTR_4g070720 39.933 596 294 16 1 583 5 549 6.93e-124 377
MS.gene056520.t1 MTR_5g021050 52.941 340 151 5 29 361 12 349 2.26e-119 363
MS.gene056520.t1 MTR_5g021050 52.941 340 151 5 29 361 12 349 2.58e-119 363
MS.gene056520.t1 MTR_7g056587 41.082 499 245 11 108 594 1 462 6.46e-115 351
MS.gene056520.t1 MTR_3g117090 38.475 577 306 13 12 583 18 550 1.72e-114 353
MS.gene056520.t1 MTR_3g117090 38.624 567 299 13 12 573 18 540 5.92e-112 346
MS.gene056520.t1 MTR_8g076880 58.451 284 114 2 59 339 45 327 1.33e-108 337
MS.gene056520.t1 MTR_6g015645 36.501 463 248 10 126 583 8 429 5.37e-91 288
MS.gene056520.t1 MTR_5g012460 47.059 306 156 4 30 332 54 356 9.43e-90 285
MS.gene056520.t1 MTR_4g070790 51.626 246 118 1 81 326 75 319 6.91e-87 276
MS.gene056520.t1 MTR_4g070730 42.384 302 145 5 94 392 55 330 6.93e-68 226
MS.gene056520.t1 MTR_4g070780 39.755 327 163 7 65 386 30 327 1.16e-66 223
MS.gene056520.t1 MTR_6g034285 49.558 113 56 1 115 227 185 296 4.39e-27 114
MS.gene056520.t1 MTR_3g060670 29.630 270 161 9 85 346 26 274 9.65e-18 85.5
MS.gene056520.t1 MTR_2g027140 31.944 216 128 6 90 298 38 241 3.47e-17 83.6
MS.gene056520.t1 MTR_3g098530 28.520 277 167 11 35 303 11 264 7.42e-16 78.6
MS.gene056520.t1 MTR_4g013300 27.727 220 135 10 91 301 126 330 1.06e-11 67.8
MS.gene056520.t1 MTR_8g095360 29.185 233 132 11 91 310 182 394 1.76e-11 67.4
MS.gene056520.t1 MTR_1g032580 26.316 247 158 10 64 304 3 231 1.91e-11 65.1
MS.gene056520.t1 MTR_1g022185 25.896 251 157 9 60 301 9 239 2.15e-11 65.5
MS.gene056520.t1 MTR_7g070480 24.405 336 195 16 91 388 101 415 2.72e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056520.t1 AT1G55690 58.029 629 216 18 1 594 1 616 0.0 647
MS.gene056520.t1 AT1G55690 58.029 629 216 18 1 594 1 616 0.0 647
MS.gene056520.t1 AT1G55690 58.029 629 216 18 1 594 1 616 0.0 647
MS.gene056520.t1 AT1G55690 58.029 629 216 18 1 594 1 616 0.0 647
MS.gene056520.t1 AT1G55690 58.029 629 216 18 1 594 1 616 0.0 647
MS.gene056520.t1 AT5G56160 47.769 605 261 9 1 589 1 566 0.0 540
MS.gene056520.t1 AT5G56160 47.769 605 261 9 1 589 1 566 0.0 540
MS.gene056520.t1 AT5G56160 64.620 342 117 2 1 338 1 342 1.18e-160 469
MS.gene056520.t1 AT4G39170 43.740 599 300 12 14 598 30 605 5.04e-157 464
MS.gene056520.t1 AT4G39170 43.740 599 298 13 14 598 30 603 3.29e-155 459
MS.gene056520.t1 AT3G24840 45.501 589 261 18 14 593 23 560 5.81e-153 452
MS.gene056520.t1 AT3G24840 45.501 589 261 18 14 593 23 560 5.81e-153 452
MS.gene056520.t1 AT3G24840 45.501 589 261 18 14 593 23 560 5.81e-153 452
MS.gene056520.t1 AT3G24840 45.222 586 266 17 14 593 23 559 8.70e-152 449
MS.gene056520.t1 AT3G24840 45.222 586 266 17 14 593 23 559 8.70e-152 449
MS.gene056520.t1 AT3G24840 45.222 586 266 17 14 593 23 559 8.70e-152 449
MS.gene056520.t1 AT3G24840 45.222 586 266 17 14 593 23 559 8.70e-152 449
MS.gene056520.t1 AT2G21520 42.088 613 303 11 14 596 30 620 1.79e-151 451
MS.gene056520.t1 AT2G21520 42.088 613 303 11 14 596 34 624 2.23e-151 451
MS.gene056520.t1 AT2G21520 42.088 613 303 11 14 596 34 624 2.23e-151 451
MS.gene056520.t1 AT4G39180 52.707 351 159 5 11 357 15 362 5.15e-127 385
MS.gene056520.t1 AT4G39180 52.707 351 159 5 11 357 15 362 6.61e-127 385
MS.gene056520.t1 AT4G39180 52.707 351 159 5 11 357 15 362 6.61e-127 385
MS.gene056520.t1 AT2G21540 54.094 342 149 5 11 348 15 352 1.17e-126 384
MS.gene056520.t1 AT2G21540 54.094 342 149 5 11 348 15 352 1.17e-126 384
MS.gene056520.t1 AT2G21540 54.094 342 149 5 11 348 15 352 1.61e-126 384
MS.gene056520.t1 AT2G21540 54.094 342 149 5 11 348 15 352 1.61e-126 384
MS.gene056520.t1 AT2G21540 54.094 342 149 5 11 348 15 352 1.61e-126 384
MS.gene056520.t1 AT2G21540 54.094 342 149 5 11 348 15 352 1.61e-126 384
MS.gene056520.t1 AT1G19650 41.043 575 303 12 40 598 50 604 3.28e-126 385
MS.gene056520.t1 AT4G34580 52.676 355 151 7 12 361 7 349 4.79e-124 377
MS.gene056520.t1 AT4G34580 52.676 355 151 7 12 361 7 349 4.79e-124 377
MS.gene056520.t1 AT2G18180 54.952 313 134 3 21 330 12 320 1.06e-119 366
MS.gene056520.t1 AT2G18180 54.952 313 134 3 21 330 12 320 1.71e-119 366
MS.gene056520.t1 AT1G75370 39.203 602 325 12 14 598 30 607 9.05e-119 366
MS.gene056520.t1 AT4G36490 54.984 311 134 3 23 330 10 317 2.68e-118 362
MS.gene056520.t1 AT1G19650 50.904 387 174 9 14 392 27 405 1.62e-117 357
MS.gene056520.t1 AT2G16380 54.294 326 143 4 14 335 9 332 1.67e-117 360
MS.gene056520.t1 AT2G16380 54.294 326 143 4 14 335 9 332 1.67e-117 360
MS.gene056520.t1 AT1G75370 39.037 602 326 12 14 598 30 607 2.33e-117 364
MS.gene056520.t1 AT1G19650 40.840 524 281 11 85 598 28 532 9.09e-116 355
MS.gene056520.t1 AT2G18180 61.826 241 91 1 90 330 10 249 6.31e-110 338
MS.gene056520.t1 AT2G18180 61.826 241 91 1 90 330 10 249 9.88e-110 338
MS.gene056520.t1 AT2G18180 61.883 223 84 1 108 330 1 222 2.09e-101 315
MS.gene056520.t1 AT2G16380 59.649 228 91 1 108 335 1 227 2.46e-97 305
MS.gene056520.t1 AT5G47510 50.000 268 130 2 60 324 18 284 7.30e-91 285
MS.gene056520.t1 AT5G47510 50.000 268 130 2 60 324 18 284 2.01e-90 285
MS.gene056520.t1 AT5G47510 50.000 268 130 2 60 324 17 283 2.10e-90 284
MS.gene056520.t1 AT5G47510 52.863 227 106 1 98 324 2 227 2.66e-83 264
MS.gene056520.t1 AT1G55840 31.646 237 147 6 85 317 31 256 3.79e-19 89.4
MS.gene056520.t1 AT1G55840 31.646 237 147 6 85 317 4 229 4.19e-19 88.6
MS.gene056520.t1 AT5G47730 30.233 215 131 5 91 298 39 241 4.20e-16 80.5
MS.gene056520.t1 AT5G47730 30.233 215 131 5 91 298 39 241 4.20e-16 80.5

Find 108 sgRNAs with CRISPR-Local

Find 267 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACCAACCTATGTTAATTT+AGG 0.104354 8.3:+31820596 MS.gene056520:CDS
ACAGTTTAGGATTAGAATTT+TGG 0.179579 8.3:+31820020 MS.gene056520:CDS
GCCATTGCAAAATGATGATA+TGG 0.233525 8.3:+31819544 MS.gene056520:CDS
ATTATTACCTTCATTATATT+AGG 0.241279 8.3:-31818772 None:intergenic
ACTTGACGCATATAAGAAAT+TGG 0.251963 8.3:-31819957 None:intergenic
GTTCTTTGGAGGAAACAATT+TGG 0.252962 8.3:+31816314 MS.gene056520:CDS
ACTAAGTTTCCTTTGTCTAA+TGG 0.270733 8.3:-31819282 None:intergenic
GGAAAAGCAAAATTGATTAT+AGG 0.271718 8.3:+31816022 MS.gene056520:CDS
CAGGCACTTCGATCAGAAAT+TGG 0.276437 8.3:+31819903 MS.gene056520:intron
AAGTGTGCTGATATATCTTT+TGG 0.288321 8.3:+31819976 MS.gene056520:CDS
AACCAACCTATGTTAATTTA+GGG 0.304940 8.3:+31820597 MS.gene056520:CDS
GAAAATGCTTATGAGCTCTT+TGG 0.319819 8.3:+31820216 MS.gene056520:CDS
CTGTATCTTTGCGATAGTTT+TGG 0.320908 8.3:-31818342 None:intergenic
CATATATTCTTCCACAGTTT+AGG 0.327780 8.3:+31820007 MS.gene056520:CDS
CATTCAGATGTGGGAAGATA+TGG 0.333166 8.3:+31816292 MS.gene056520:CDS
TCAATGCTGGTCCTGGCTTT+AGG 0.333637 8.3:+31818282 MS.gene056520:CDS
CTGGAGAAGGTGGATGTCTT+AGG 0.352798 8.3:+31818725 MS.gene056520:CDS
CCAAGCCTCTCGATGTAAAC+TGG 0.368726 8.3:-31817826 None:intergenic
TGTGGGAAGATATGGTTCTT+TGG 0.374248 8.3:+31816300 MS.gene056520:CDS
GGTGGCTCGTGTAAATGTTC+TGG 0.379514 8.3:+31818706 MS.gene056520:CDS
AGCTGTAAAGATAATGCTTC+TGG 0.386054 8.3:+31819473 MS.gene056520:CDS
CTGGCTTTAGGAAGATGCTT+TGG 0.391128 8.3:+31818294 MS.gene056520:CDS
TCATTAATCATTACTATGTC+AGG 0.395677 8.3:+31815768 None:intergenic
TTTGTAGGTGTGTTTGAAAA+TGG 0.413464 8.3:-31818956 None:intergenic
TGTAATTTAAATAAAGACTT+TGG 0.416329 8.3:-31818561 None:intergenic
TCATCTCTATCATCTTCAAT+TGG 0.419200 8.3:-31816048 None:intergenic
AAATTGGTTCGGCTTTGTTA+AGG 0.430507 8.3:+31819919 MS.gene056520:CDS
GGAGTTCGAGAGAGCTCTAC+AGG 0.437885 8.3:+31817915 MS.gene056520:CDS
TGGATGTCTTAGGTCTAGTA+AGG 0.439716 8.3:+31818735 MS.gene056520:CDS
TGCTGAAATACCTATGGAAA+AGG 0.448737 8.3:+31820192 MS.gene056520:CDS
TCCCCTAAATTAACATAGGT+TGG 0.451202 8.3:-31820599 None:intergenic
GTAGAGCTCTCTCGAACTCC+TGG 0.454796 8.3:-31817912 None:intergenic
TAGGTATTTCAGCAGGTCTA+TGG 0.457287 8.3:-31820183 None:intergenic
CAAAACTATCGCAAAGATAC+AGG 0.460862 8.3:+31818343 MS.gene056520:CDS
ACCTACTGCTGCGAATCTCT+TGG 0.474183 8.3:+31818111 MS.gene056520:CDS
ATATGTCAACAGCAGAATCT+TGG 0.477577 8.3:+31819234 MS.gene056520:CDS
AGGTTATCATGGAGTTGATA+AGG 0.479015 8.3:+31817795 MS.gene056520:CDS
CCAGTTTACATCGAGAGGCT+TGG 0.480433 8.3:+31817826 MS.gene056520:CDS
TATTACCCTCAAGGTTATCA+TGG 0.482317 8.3:+31817784 MS.gene056520:CDS
TATATCGTCAATGCTGGTCC+TGG 0.487761 8.3:+31818275 MS.gene056520:CDS
TCTGTTCATCGGAAACTTTG+AGG 0.488990 8.3:-31818926 None:intergenic
GTGTGATAATGATCATGATT+AGG 0.489636 8.3:-31816123 None:intergenic
CAAAGCATCTTCCTAAAGCC+AGG 0.490122 8.3:-31818293 None:intergenic
TGAAGACGTTCTTGTATACA+TGG 0.496252 8.3:-31820130 None:intergenic
TCAAGAAACTTCTGAGCAGC+AGG 0.496593 8.3:-31818317 None:intergenic
TAGACCTGCTGAAATACCTA+TGG 0.498563 8.3:+31820186 MS.gene056520:CDS
ACTTCGATCAGAAATTGGTT+CGG 0.501529 8.3:+31819908 MS.gene056520:CDS
CCATTGCAAAATGATGATAT+GGG 0.501678 8.3:+31819545 MS.gene056520:CDS
CAACTCCATGATAACCTTGA+GGG 0.508319 8.3:-31817789 None:intergenic
AATATTAGATGTACATGGCT+TGG 0.512053 8.3:+31817993 MS.gene056520:CDS
AAGCATTATCTTTACAGCTA+CGG 0.514810 8.3:-31819469 None:intergenic
CATATCTTCCCACATCTGAA+TGG 0.525456 8.3:-31816291 None:intergenic
AGTATAGAGAATAACCCTCT+TGG 0.533030 8.3:-31820275 None:intergenic
AAACTCCCCTAAATTAACAT+AGG 0.533050 8.3:-31820603 None:intergenic
GAATGATCCTAATATAATGA+AGG 0.534117 8.3:+31818765 MS.gene056520:CDS
AGATCAATTTCAATTTACTC+AGG 0.536555 8.3:+31819517 MS.gene056520:CDS
AATCCATCGCTTTGATGCAA+TGG 0.539148 8.3:-31817956 None:intergenic
CAAATGTATATCGTCAATGC+TGG 0.541743 8.3:+31818269 MS.gene056520:CDS
TTAGGTCTAGTAAGGGTCCA+TGG 0.548901 8.3:+31818743 MS.gene056520:CDS
GGGAAGATATGGTTCTTTGG+AGG 0.550950 8.3:+31816303 MS.gene056520:CDS
TGCTTATGAGCTCTTTGGAT+AGG 0.551453 8.3:+31820221 MS.gene056520:CDS
AGATGATAGAGATGAACAAG+AGG 0.552908 8.3:+31816056 MS.gene056520:CDS
TGTCAAAACACCTTCTGAAG+AGG 0.553214 8.3:+31820096 MS.gene056520:CDS
TAAGAAGGTCAAGAATAAGA+AGG 0.555650 8.3:+31815938 MS.gene056520:CDS
ATTATATTAGGATCATTCCA+TGG 0.564352 8.3:-31818760 None:intergenic
CTCTCTCGAACTCCTGGACA+TGG 0.567372 8.3:-31817906 None:intergenic
CAGAAGATGAGAGATTAAGA+AGG 0.569165 8.3:+31815923 MS.gene056520:CDS
GCCGACCAGTTTACATCGAG+AGG 0.569512 8.3:+31817821 MS.gene056520:CDS
ATATTTAAAATACCATGTCC+AGG 0.575974 8.3:+31817894 MS.gene056520:CDS
GCTCCATTGCATCAAAGCGA+TGG 0.582925 8.3:+31817953 MS.gene056520:CDS
TTGAGAAGACCATTCAGATG+TGG 0.587288 8.3:+31816282 MS.gene056520:CDS
CTTGATGCGCATAACCACAA+TGG 0.587615 8.3:+31817867 MS.gene056520:CDS
CATTCTCTCAAGAAAACAAG+AGG 0.592966 8.3:+31816000 MS.gene056520:CDS
TTAGTTTGTTCATAATGTGG+AGG 0.594499 8.3:+31818884 MS.gene056520:intron
GAGAACACAAAACAATATTG+TGG 0.594851 8.3:+31820042 MS.gene056520:CDS
GTATTGCAATATTACCCTCA+AGG 0.595104 8.3:+31817775 MS.gene056520:CDS
TGAGAAGACCATTCAGATGT+GGG 0.599172 8.3:+31816283 MS.gene056520:CDS
CTTGCTCATCCATTAGACAA+AGG 0.599828 8.3:+31819273 MS.gene056520:CDS
GAGAAACCTTACCTTGAGGA+TGG 0.600349 8.3:-31816345 None:intergenic
ATCATTATCACACACTCTTG+AGG 0.610477 8.3:+31816133 MS.gene056520:CDS
TTTGATGCAATGGAGCATGC+TGG 0.613304 8.3:-31817946 None:intergenic
AACACAAAACAATATTGTGG+TGG 0.618764 8.3:+31820045 MS.gene056520:CDS
ACCAACCTATGTTAATTTAG+GGG 0.621498 8.3:+31820598 MS.gene056520:CDS
TCGTGTAAATGTTCTGGAGA+AGG 0.622712 8.3:+31818712 MS.gene056520:CDS
GCCTCTCGATGTAAACTGGT+CGG 0.622982 8.3:-31817822 None:intergenic
TACATGATATCATCGACTCT+AGG 0.623565 8.3:+31818580 MS.gene056520:CDS
TCAACTCCATGATAACCTTG+AGG 0.626407 8.3:-31817790 None:intergenic
TGGAACTGATACCATCCTCA+AGG 0.627272 8.3:+31816334 MS.gene056520:CDS
ATGTACATCTAATATTGTTG+TGG 0.630684 8.3:-31817986 None:intergenic
CGACCTTGAAAATACCAAGA+GGG 0.632338 8.3:+31820261 MS.gene056520:CDS
GTTATGCGCATCAAGCGGCT+AGG 0.632760 8.3:-31817859 None:intergenic
AGAATACGATCCTCTTCAGA+AGG 0.634299 8.3:-31820106 None:intergenic
AAAATTCTAATCCTAAACTG+TGG 0.639752 8.3:-31820018 None:intergenic
TATCATGGAGTTGATAAGGA+AGG 0.642212 8.3:+31817799 MS.gene056520:CDS
GGATGTCTTAGGTCTAGTAA+GGG 0.644267 8.3:+31818736 MS.gene056520:CDS
TTGTGGTTATGCGCATCAAG+CGG 0.644616 8.3:-31817864 None:intergenic
TGATAATGATCATGATTAGG+AGG 0.646729 8.3:-31816120 None:intergenic
ACAACAATATTAGATGTACA+TGG 0.648869 8.3:+31817988 MS.gene056520:CDS
TGTAAATGTTCTGGAGAAGG+TGG 0.649720 8.3:+31818715 MS.gene056520:CDS
ATTCTCTCAAGAAAACAAGA+GGG 0.654597 8.3:+31816001 MS.gene056520:CDS
CATTGCAAAATGATGATATG+GGG 0.660842 8.3:+31819546 MS.gene056520:CDS
GCCAAGAGATTCGCAGCAGT+AGG 0.663082 8.3:-31818112 None:intergenic
CACTTCTTCATGATCAACTG+AGG 0.669464 8.3:-31819318 None:intergenic
ACTTGTACAGAGAATTCCAA+AGG 0.675982 8.3:+31819575 MS.gene056520:CDS
TGAGCTACTAGAGAATCTGA+AGG 0.697572 8.3:+31820405 MS.gene056520:CDS
TGATCAACTGAGGCTAAACG+AGG 0.699460 8.3:-31819308 None:intergenic
TCGACCTTGAAAATACCAAG+AGG 0.727189 8.3:+31820260 MS.gene056520:CDS
AGATAACAGTTACTACCCCG+AGG 0.730209 8.3:+31818150 MS.gene056520:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GATAAATTAATTGTATTTTA+TGG - chr8.3:31816916-31816935 None:intergenic 10.0%
!!! TTTTTCAATAATCTTAATTT+GGG + chr8.3:31819632-31819651 MS.gene056520:intron 10.0%
!! ATTATTACCTTCATTATATT+AGG - chr8.3:31818775-31818794 None:intergenic 15.0%
!! GATGATATAATTTACTAATT+TGG + chr8.3:31819037-31819056 MS.gene056520:intron 15.0%
!! TAATATAATGAAGGTAATAA+TGG + chr8.3:31818774-31818793 MS.gene056520:intron 15.0%
!! TGTAATTTAAATAAAGACTT+TGG - chr8.3:31818564-31818583 None:intergenic 15.0%
!!! AAATTAATTGTATTTTATGG+AGG - chr8.3:31816913-31816932 None:intergenic 15.0%
!!! AAATTGACGTTATTTTAATT+TGG - chr8.3:31818194-31818213 None:intergenic 15.0%
!!! AATTGACGTTATTTTAATTT+GGG - chr8.3:31818193-31818212 None:intergenic 15.0%
!!! ATACAACATTTTTATTGATT+AGG - chr8.3:31818051-31818070 None:intergenic 15.0%
!!! ATATTTATTGATTATAGTAC+TGG + chr8.3:31817065-31817084 MS.gene056520:intron 15.0%
!!! GTTTTTCAATAATCTTAATT+TGG + chr8.3:31819631-31819650 MS.gene056520:intron 15.0%
!!! TATTATGTTGATTGTTAATT+TGG + chr8.3:31816621-31816640 MS.gene056520:intron 15.0%
!!! TTTACAATTTTGATTAATGT+TGG + chr8.3:31816523-31816542 MS.gene056520:intron 15.0%
!! AGATAAAACAGTATATTGAA+TGG - chr8.3:31819425-31819444 None:intergenic 20.0%
!! ATAATTGTAGAACATTTATG+AGG - chr8.3:31817125-31817144 None:intergenic 20.0%
!! ATGAGTTTAATGAACTAAAA+TGG - chr8.3:31816718-31816737 None:intergenic 20.0%
!! ATGGTTAGAAAATGAATATA+AGG - chr8.3:31816699-31816718 None:intergenic 20.0%
!! GTAATTGTATATTTGCATAT+AGG - chr8.3:31819169-31819188 None:intergenic 20.0%
!! TAAATAGTACTTATATTCAG+CGG - chr8.3:31820526-31820545 None:intergenic 20.0%
!! TATATACAAGTTTAACTCAA+TGG + chr8.3:31817605-31817624 MS.gene056520:intron 20.0%
!! TCATAAAAAATGTGTATTCT+AGG + chr8.3:31820571-31820590 MS.gene056520:intron 20.0%
!! TGAAATGTGATATGAAAATA+GGG + chr8.3:31815863-31815882 MS.gene056520:intron 20.0%
!! TTGAAATGTGATATGAAAAT+AGG + chr8.3:31815862-31815881 MS.gene056520:intron 20.0%
!! TTGATTGTAGAACATTTAAT+AGG - chr8.3:31817163-31817182 None:intergenic 20.0%
!!! AATTTTTTGTAATATGATGC+AGG + chr8.3:31820345-31820364 MS.gene056520:intron 20.0%
!!! AGTAATTAATTTTGTTGCAT+TGG + chr8.3:31816798-31816817 MS.gene056520:intron 20.0%
!!! ATTTTAGTTTGTTCATAATG+TGG + chr8.3:31818881-31818900 MS.gene056520:intron 20.0%
!!! CAAATTCTCATATTTTTTAC+AGG + chr8.3:31819884-31819903 MS.gene056520:intron 20.0%
!!! TATATATTTTAACTTGTTGC+TGG + chr8.3:31818373-31818392 MS.gene056520:intron 20.0%
!!! TCTCTTTCTATTTTCTTAAA+AGG + chr8.3:31816364-31816383 MS.gene056520:intron 20.0%
! AAAATTCTAATCCTAAACTG+TGG - chr8.3:31820021-31820040 None:intergenic 25.0%
! AAACCAACCTATGTTAATTT+AGG + chr8.3:31820596-31820615 MS.gene056520:CDS 25.0%
! AAAGCTAAGATTAATGTCTA+TGG + chr8.3:31817227-31817246 MS.gene056520:intron 25.0%
! AACCAACCTATGTTAATTTA+GGG + chr8.3:31820597-31820616 MS.gene056520:CDS 25.0%
! AAGAATATGCTAAACATTGT+AGG - chr8.3:31817277-31817296 None:intergenic 25.0%
! AATACAATGTAGTATGATGA+AGG - chr8.3:31818618-31818637 None:intergenic 25.0%
! ACAACAATATTAGATGTACA+TGG + chr8.3:31817988-31818007 MS.gene056520:CDS 25.0%
! ACATGTATCAGGTTTAAATT+TGG - chr8.3:31818458-31818477 None:intergenic 25.0%
! AGAATATGCTAAACATTGTA+GGG - chr8.3:31817276-31817295 None:intergenic 25.0%
! AGATCAATTTCAATTTACTC+AGG + chr8.3:31819517-31819536 MS.gene056520:CDS 25.0%
! AGCATATTCTTAGAAAAGTA+TGG + chr8.3:31817286-31817305 MS.gene056520:intron 25.0%
! ATAATGTCATGTGTAATACA+GGG + chr8.3:31818073-31818092 MS.gene056520:intron 25.0%
! ATGTACATCTAATATTGTTG+TGG - chr8.3:31817989-31818008 None:intergenic 25.0%
! ATGTATCTGATGATATTTGA+AGG + chr8.3:31817726-31817745 MS.gene056520:intron 25.0%
! ATTATATTAGGATCATTCCA+TGG - chr8.3:31818763-31818782 None:intergenic 25.0%
! CTCTAAATTTCATCATTAAC+AGG + chr8.3:31817346-31817365 MS.gene056520:intron 25.0%
! GAAATGTGATATGAAAATAG+GGG + chr8.3:31815864-31815883 MS.gene056520:intron 25.0%
! GAATGATCCTAATATAATGA+AGG + chr8.3:31818765-31818784 MS.gene056520:CDS 25.0%
! GAGCATTAAATTAGAGTAAT+TGG + chr8.3:31817318-31817337 MS.gene056520:intron 25.0%
! GGAAAAGCAAAATTGATTAT+AGG + chr8.3:31816022-31816041 MS.gene056520:CDS 25.0%
! TAATAACAAGTCTTCTCAAA+TGG - chr8.3:31819362-31819381 None:intergenic 25.0%
! TATACACACTCTTCAAAAAT+TGG + chr8.3:31817462-31817481 MS.gene056520:intron 25.0%
! TTTGTTCAACATGGAATATA+AGG - chr8.3:31819868-31819887 None:intergenic 25.0%
!! AAAGGAAGTTTTGCAATTAA+AGG + chr8.3:31817579-31817598 MS.gene056520:intron 25.0%
!! AAGGAAGTTTTGCAATTAAA+GGG + chr8.3:31817580-31817599 MS.gene056520:intron 25.0%
!! ACATTGTATTTCTATTGAGA+TGG + chr8.3:31818628-31818647 MS.gene056520:intron 25.0%
!! ATATGAGAATTTGTTCAACA+TGG - chr8.3:31819776-31819795 None:intergenic 25.0%
!! ATATTTAAAATACCATGTCC+AGG + chr8.3:31817894-31817913 MS.gene056520:CDS 25.0%
!! ATTCTCATGATTTTGTAAAC+AGG - chr8.3:31816829-31816848 None:intergenic 25.0%
!! ATTTCACCATTTTCCAAAAT+TGG + chr8.3:31816412-31816431 MS.gene056520:intron 25.0%
!! CAAAAATATTCCTTTGAAAG+TGG + chr8.3:31819692-31819711 MS.gene056520:intron 25.0%
!! CAACTCTTTTTGACAATAAA+TGG + chr8.3:31818988-31819007 MS.gene056520:intron 25.0%
!! CATTACTTTCATGAATTTTC+AGG + chr8.3:31818530-31818549 MS.gene056520:intron 25.0%
!! CTTTTTGACAATAAATGGTT+TGG + chr8.3:31818993-31819012 MS.gene056520:intron 25.0%
!! GTTTTTGCTTATATTTACAG+AGG + chr8.3:31818481-31818500 MS.gene056520:intron 25.0%
!! TTAAGAGTGACTTTTATTCA+GGG + chr8.3:31816983-31817002 MS.gene056520:intron 25.0%
!! TTTAAGAGTGACTTTTATTC+AGG + chr8.3:31816982-31817001 MS.gene056520:intron 25.0%
!! TTTTAAATATCGATCCATTG+TGG - chr8.3:31817884-31817903 None:intergenic 25.0%
!!! ACAGTTTAGGATTAGAATTT+TGG + chr8.3:31820020-31820039 MS.gene056520:CDS 25.0%
!!! ACGTTATTTTAATTTGGGAA+GGG - chr8.3:31818188-31818207 None:intergenic 25.0%
!!! ATCTTAGCTTTTTTTAGATC+AGG - chr8.3:31817218-31817237 None:intergenic 25.0%
!!! GAGCATTTTGGTTTATTATT+AGG + chr8.3:31816234-31816253 MS.gene056520:intron 25.0%
!!! GTTGATTTGTTGACTAATTT+GGG - chr8.3:31816677-31816696 None:intergenic 25.0%
!!! TATTAGGTTTTTGAAAGCAA+GGG + chr8.3:31816250-31816269 MS.gene056520:intron 25.0%
!!! TATTTTGGAACATTTGAAAG+TGG + chr8.3:31819807-31819826 MS.gene056520:intron 25.0%
!!! TTATTAGGTTTTTGAAAGCA+AGG + chr8.3:31816249-31816268 MS.gene056520:intron 25.0%
!!! TTGTTTTTTTGCTTGTAGTA+CGG + chr8.3:31817031-31817050 MS.gene056520:intron 25.0%
AAACTCACTAGCAAGTATTT+CGG + chr8.3:31819836-31819855 MS.gene056520:intron 30.0%
AAACTCCCCTAAATTAACAT+AGG - chr8.3:31820606-31820625 None:intergenic 30.0%
AACACAAAACAATATTGTGG+TGG + chr8.3:31820045-31820064 MS.gene056520:CDS 30.0%
AAGCATTATCTTTACAGCTA+CGG - chr8.3:31819472-31819491 None:intergenic 30.0%
AATATTAGATGTACATGGCT+TGG + chr8.3:31817993-31818012 MS.gene056520:CDS 30.0%
AATGTTCTACAATCAATCAC+TGG + chr8.3:31817167-31817186 MS.gene056520:intron 30.0%
ACAGTATATTGAATGGTTGA+AGG - chr8.3:31819418-31819437 None:intergenic 30.0%
ACCAACCTATGTTAATTTAG+GGG + chr8.3:31820598-31820617 MS.gene056520:CDS 30.0%
ACTAAGTTTCCTTTGTCTAA+TGG - chr8.3:31819285-31819304 None:intergenic 30.0%
ACTTGACGCATATAAGAAAT+TGG - chr8.3:31819960-31819979 None:intergenic 30.0%
AGCAGTATTCTATATATGCT+AGG + chr8.3:31817684-31817703 MS.gene056520:intron 30.0%
ATCTTAGCCCAAATATTTGA+TGG - chr8.3:31816454-31816473 None:intergenic 30.0%
ATTCTCTCAAGAAAACAAGA+GGG + chr8.3:31816001-31816020 MS.gene056520:CDS 30.0%
ATTTGGACTTGAGACTTAAA+CGG + chr8.3:31819054-31819073 MS.gene056520:intron 30.0%
CAAATATTTGGGCTAAGATA+GGG + chr8.3:31816455-31816474 MS.gene056520:intron 30.0%
CATATATTCTTCCACAGTTT+AGG + chr8.3:31820007-31820026 MS.gene056520:CDS 30.0%
CATTGCAAAATGATGATATG+GGG + chr8.3:31819546-31819565 MS.gene056520:CDS 30.0%
CCATTGCAAAATGATGATAT+GGG + chr8.3:31819545-31819564 MS.gene056520:CDS 30.0%
CTTGACATATTATCTGATGA+TGG - chr8.3:31816556-31816575 None:intergenic 30.0%
GAAACTAAACAAGACAATCT+AGG - chr8.3:31819662-31819681 None:intergenic 30.0%
GAAAGTAATGCATTATCAGT+AGG - chr8.3:31818520-31818539 None:intergenic 30.0%
GAGAACACAAAACAATATTG+TGG + chr8.3:31820042-31820061 MS.gene056520:CDS 30.0%
GAGACTTAAAGGACTAATAT+AGG + chr8.3:31819111-31819130 MS.gene056520:intron 30.0%
GATAATGTCATGTGTAATAC+AGG + chr8.3:31818072-31818091 MS.gene056520:intron 30.0%
GCAAAAACAATACATGTATC+AGG - chr8.3:31818469-31818488 None:intergenic 30.0%
GTTCTCTAAATGTACATAAG+AGG + chr8.3:31817383-31817402 MS.gene056520:intron 30.0%
GTTTCAATTTCCACTTTCAA+AGG - chr8.3:31819705-31819724 None:intergenic 30.0%
TAAGAAGGTCAAGAATAAGA+AGG + chr8.3:31815938-31815957 MS.gene056520:CDS 30.0%
TATAGGAAAAATCATGCTTC+TGG - chr8.3:31819152-31819171 None:intergenic 30.0%
TCAAATATTTGGGCTAAGAT+AGG + chr8.3:31816454-31816473 MS.gene056520:intron 30.0%
TCATCTCTATCATCTTCAAT+TGG - chr8.3:31816051-31816070 None:intergenic 30.0%
TGGAAAATGGTGAAATTAAG+AGG - chr8.3:31816408-31816427 None:intergenic 30.0%
TTTGTAGGTGTGTTTGAAAA+TGG - chr8.3:31818959-31818978 None:intergenic 30.0%
! AGCATGTTTCTTTACTGATT+TGG - chr8.3:31817411-31817430 None:intergenic 30.0%
! ATGGTCAATTTTCTGTTCAT+CGG - chr8.3:31818940-31818959 None:intergenic 30.0%
! CAATATACTGTTTTATCTGC+AGG + chr8.3:31819427-31819446 MS.gene056520:intron 30.0%
! GAGTATTGTGACACTAATTT+GGG + chr8.3:31818851-31818870 MS.gene056520:intron 30.0%
! GGCAAAAAAGTATATGTATC+TGG + chr8.3:31818431-31818450 MS.gene056520:intron 30.0%
! GTGTGATAATGATCATGATT+AGG - chr8.3:31816126-31816145 None:intergenic 30.0%
! GTGTTTTCTGTTTTCTTCAA+AGG + chr8.3:31817561-31817580 MS.gene056520:intron 30.0%
! TGATAATGATCATGATTAGG+AGG - chr8.3:31816123-31816142 None:intergenic 30.0%
! TTTTCAAACACACCTACAAA+AGG + chr8.3:31818959-31818978 MS.gene056520:CDS 30.0%
! TTTTTGTAATATGATGCAGG+TGG + chr8.3:31820348-31820367 MS.gene056520:intron 30.0%
!! AAGTGTGCTGATATATCTTT+TGG + chr8.3:31819976-31819995 MS.gene056520:CDS 30.0%
!! AGAGTATTGTGACACTAATT+TGG + chr8.3:31818850-31818869 MS.gene056520:intron 30.0%
!! ATCTCTTTTGAGCGTTTTTT+CGG - chr8.3:31819501-31819520 None:intergenic 30.0%
!! GAAACTAGAAAAAGCATTTG+TGG + chr8.3:31820153-31820172 MS.gene056520:CDS 30.0%
!! GGTTGATTTGTTGACTAATT+TGG - chr8.3:31816678-31816697 None:intergenic 30.0%
!! TTAGTTTGTTCATAATGTGG+AGG + chr8.3:31818884-31818903 MS.gene056520:intron 30.0%
!! TTGAACTGAGTCTTGTTAAA+AGG + chr8.3:31816947-31816966 MS.gene056520:intron 30.0%
!!! AGTCAATTGCCAGATTTTTT+GGG + chr8.3:31818685-31818704 MS.gene056520:intron 30.0%
!!! CCTGTATTTTTTGTTACAGA+GGG - chr8.3:31818413-31818432 None:intergenic 30.0%
!!! GACGTTATTTTAATTTGGGA+AGG - chr8.3:31818189-31818208 None:intergenic 30.0%
!!! GTGTTTTGACATCTTCTATA+AGG - chr8.3:31820087-31820106 None:intergenic 30.0%
AAGGGACAATGTAAAAACCT+CGG - chr8.3:31818170-31818189 None:intergenic 35.0%
ACTTCGATCAGAAATTGGTT+CGG + chr8.3:31819908-31819927 MS.gene056520:CDS 35.0%
ACTTGTACAGAGAATTCCAA+AGG + chr8.3:31819575-31819594 MS.gene056520:CDS 35.0%
AGATGATAGAGATGAACAAG+AGG + chr8.3:31816056-31816075 MS.gene056520:CDS 35.0%
AGCTGTAAAGATAATGCTTC+TGG + chr8.3:31819473-31819492 MS.gene056520:CDS 35.0%
AGTATAGAGAATAACCCTCT+TGG - chr8.3:31820278-31820297 None:intergenic 35.0%
AGTCTTCTCAAATGGTTCAA+AGG - chr8.3:31819354-31819373 None:intergenic 35.0%
ATATGTCAACAGCAGAATCT+TGG + chr8.3:31819234-31819253 MS.gene056520:CDS 35.0%
ATCATTATCACACACTCTTG+AGG + chr8.3:31816133-31816152 MS.gene056520:CDS 35.0%
ATGTGATATGAAAATAGGGG+TGG + chr8.3:31815867-31815886 MS.gene056520:intron 35.0%
CAAAACTATCGCAAAGATAC+AGG + chr8.3:31818343-31818362 MS.gene056520:CDS 35.0%
CAAATGTATATCGTCAATGC+TGG + chr8.3:31818269-31818288 MS.gene056520:CDS 35.0%
CAGAAGATGAGAGATTAAGA+AGG + chr8.3:31815923-31815942 MS.gene056520:CDS 35.0%
CATTCTCTCAAGAAAACAAG+AGG + chr8.3:31816000-31816019 MS.gene056520:CDS 35.0%
CCCTCTGTAACAAAAAATAC+AGG + chr8.3:31818410-31818429 MS.gene056520:intron 35.0%
GAAAATGCTTATGAGCTCTT+TGG + chr8.3:31820216-31820235 MS.gene056520:CDS 35.0%
GCCATTGCAAAATGATGATA+TGG + chr8.3:31819544-31819563 MS.gene056520:CDS 35.0%
GTATTGCAATATTACCCTCA+AGG + chr8.3:31817775-31817794 MS.gene056520:CDS 35.0%
GTGTACATCTTGAGACTTAA+AGG + chr8.3:31819100-31819119 MS.gene056520:intron 35.0%
TACAATCAATCACTGGTAGT+AGG + chr8.3:31817174-31817193 MS.gene056520:intron 35.0%
TACAGAGAATTCCAAAGGTA+CGG + chr8.3:31819580-31819599 MS.gene056520:intron 35.0%
TATTACCCTCAAGGTTATCA+TGG + chr8.3:31817784-31817803 MS.gene056520:CDS 35.0%
TCATCATTAACAGGTTGCAT+TGG + chr8.3:31817355-31817374 MS.gene056520:intron 35.0%
TCCCCTAAATTAACATAGGT+TGG - chr8.3:31820602-31820621 None:intergenic 35.0%
TGAAGACGTTCTTGTATACA+TGG - chr8.3:31820133-31820152 None:intergenic 35.0%
TGCTGAAATACCTATGGAAA+AGG + chr8.3:31820192-31820211 MS.gene056520:CDS 35.0%
TGGTCCTCCATCAAATATTT+GGG + chr8.3:31816444-31816463 MS.gene056520:intron 35.0%
TGTCTGCAAATACATGTTGA+CGG - chr8.3:31818243-31818262 None:intergenic 35.0%
TTAGCCCAAATATTTGATGG+AGG - chr8.3:31816451-31816470 None:intergenic 35.0%
TTGGTCCTCCATCAAATATT+TGG + chr8.3:31816443-31816462 MS.gene056520:intron 35.0%
! AATGAGTGAAGTGTTAGAAG+TGG - chr8.3:31816648-31816667 None:intergenic 35.0%
! AGCATTTTCTCCTTTTCCAT+AGG - chr8.3:31820205-31820224 None:intergenic 35.0%
! CACAATACTCTAGTTCAACA+TGG - chr8.3:31818841-31818860 None:intergenic 35.0%
! CCCATATCATCATTTTGCAA+TGG - chr8.3:31819548-31819567 None:intergenic 35.0%
! CTGTATCTTTGCGATAGTTT+TGG - chr8.3:31818345-31818364 None:intergenic 35.0%
! GACGCTTAATTTGAGACATA+AGG + chr8.3:31816775-31816794 MS.gene056520:intron 35.0%
! GAGTTGAACTTACCTTTTGT+AGG - chr8.3:31818974-31818993 None:intergenic 35.0%
! GATCATGAAGAAGTGAGTTT+TGG + chr8.3:31819326-31819345 MS.gene056520:intron 35.0%
! GTTCTTTGGAGGAAACAATT+TGG + chr8.3:31816314-31816333 MS.gene056520:CDS 35.0%
! TAACCCTCTTGGTATTTTCA+AGG - chr8.3:31820267-31820286 None:intergenic 35.0%
! TTTGCTTGTAGTACGGATTA+TGG + chr8.3:31817038-31817057 MS.gene056520:intron 35.0%
! TTTTCCATAGGTATTTCAGC+AGG - chr8.3:31820193-31820212 None:intergenic 35.0%
!! AAATTGGTTCGGCTTTGTTA+AGG + chr8.3:31819919-31819938 MS.gene056520:CDS 35.0%
!! AGGTTATCATGGAGTTGATA+AGG + chr8.3:31817795-31817814 MS.gene056520:CDS 35.0%
!! TACATGATATCATCGACTCT+AGG + chr8.3:31818580-31818599 MS.gene056520:CDS 35.0%
!! TATCATGGAGTTGATAAGGA+AGG + chr8.3:31817799-31817818 MS.gene056520:CDS 35.0%
!! TTATAGTACTGGTTAGACTC+TGG + chr8.3:31817076-31817095 MS.gene056520:intron 35.0%
!!! CAGTCAATTGCCAGATTTTT+TGG + chr8.3:31818684-31818703 MS.gene056520:intron 35.0%
!!! GCCTGTATTTTTTGTTACAG+AGG - chr8.3:31818414-31818433 None:intergenic 35.0%
!!! GTGTTTCTGAAAGAGCATTT+TGG + chr8.3:31816222-31816241 MS.gene056520:intron 35.0%
AATCCATCGCTTTGATGCAA+TGG - chr8.3:31817959-31817978 None:intergenic 40.0%
ACCATATGTACTGTTCCTGT+CGG + chr8.3:31819727-31819746 MS.gene056520:intron 40.0%
AGAATACGATCCTCTTCAGA+AGG - chr8.3:31820109-31820128 None:intergenic 40.0%
AGGGACAATGTAAAAACCTC+GGG - chr8.3:31818169-31818188 None:intergenic 40.0%
ATTTGATGGAGGACCAAAAC+TGG - chr8.3:31816440-31816459 None:intergenic 40.0%
CAACTCCATGATAACCTTGA+GGG - chr8.3:31817792-31817811 None:intergenic 40.0%
CACTTCTTCATGATCAACTG+AGG - chr8.3:31819321-31819340 None:intergenic 40.0%
CATATCTTCCCACATCTGAA+TGG - chr8.3:31816294-31816313 None:intergenic 40.0%
CATTCAGATGTGGGAAGATA+TGG + chr8.3:31816292-31816311 MS.gene056520:CDS 40.0%
CGACCTTGAAAATACCAAGA+GGG + chr8.3:31820261-31820280 MS.gene056520:CDS 40.0%
CTTGCTCATCCATTAGACAA+AGG + chr8.3:31819273-31819292 MS.gene056520:CDS 40.0%
GAAAGAGAAACCTTACCTTG+AGG - chr8.3:31816352-31816371 None:intergenic 40.0%
GGATGTCTTAGGTCTAGTAA+GGG + chr8.3:31818736-31818755 MS.gene056520:CDS 40.0%
GTCTCAAGATGTACACATCA+TGG - chr8.3:31819096-31819115 None:intergenic 40.0%
TAGACCTGCTGAAATACCTA+TGG + chr8.3:31820186-31820205 MS.gene056520:CDS 40.0%
TAGGTATTTCAGCAGGTCTA+TGG - chr8.3:31820186-31820205 None:intergenic 40.0%
TCAACTCCATGATAACCTTG+AGG - chr8.3:31817793-31817812 None:intergenic 40.0%
TCGACCTTGAAAATACCAAG+AGG + chr8.3:31820260-31820279 MS.gene056520:CDS 40.0%
TCTGTTCATCGGAAACTTTG+AGG - chr8.3:31818929-31818948 None:intergenic 40.0%
TGAGAAGACCATTCAGATGT+GGG + chr8.3:31816283-31816302 MS.gene056520:CDS 40.0%
TGAGCTACTAGAGAATCTGA+AGG + chr8.3:31820405-31820424 MS.gene056520:CDS 40.0%
TGCATTATCAGTAGGACTTC+AGG - chr8.3:31818512-31818531 None:intergenic 40.0%
TGCTTATGAGCTCTTTGGAT+AGG + chr8.3:31820221-31820240 MS.gene056520:CDS 40.0%
TGGATGTCTTAGGTCTAGTA+AGG + chr8.3:31818735-31818754 MS.gene056520:CDS 40.0%
TGTGGGAAGATATGGTTCTT+TGG + chr8.3:31816300-31816319 MS.gene056520:CDS 40.0%
TTGAGAAGACCATTCAGATG+TGG + chr8.3:31816282-31816301 MS.gene056520:CDS 40.0%
TTTGATGGAGGACCAAAACT+GGG - chr8.3:31816439-31816458 None:intergenic 40.0%
! ACAGAGAATTCCAAAGGTAC+GGG + chr8.3:31819581-31819600 MS.gene056520:intron 40.0%
! ACCAAAACTGGGACCAATTT+TGG - chr8.3:31816428-31816447 None:intergenic 40.0%
! ACTGTTTTATCTGCAGGCTA+GGG + chr8.3:31819433-31819452 MS.gene056520:intron 40.0%
! CTTGTAGTACGGATTATGGT+TGG + chr8.3:31817042-31817061 MS.gene056520:intron 40.0%
! TACTGTTTTATCTGCAGGCT+AGG + chr8.3:31819432-31819451 MS.gene056520:intron 40.0%
! TCCAAAATTGGTCCCAGTTT+TGG + chr8.3:31816424-31816443 MS.gene056520:intron 40.0%
! TGTCAAAACACCTTCTGAAG+AGG + chr8.3:31820096-31820115 MS.gene056520:CDS 40.0%
!! ATGTACATGGCTTGGTATGT+AGG + chr8.3:31818001-31818020 MS.gene056520:intron 40.0%
!! CTGGGACCAATTTTGGAAAA+TGG - chr8.3:31816421-31816440 None:intergenic 40.0%
!! CTTTTATTCAGGGAGAGTGT+TGG + chr8.3:31816993-31817012 MS.gene056520:intron 40.0%
!! TCGTGTAAATGTTCTGGAGA+AGG + chr8.3:31818712-31818731 MS.gene056520:CDS 40.0%
!! TGTAAATGTTCTGGAGAAGG+TGG + chr8.3:31818715-31818734 MS.gene056520:CDS 40.0%
!!! CAATTGCCAGATTTTTTGGG+TGG + chr8.3:31818688-31818707 MS.gene056520:CDS 40.0%
ACATCCTATTCTCGTCTTGC+AGG + chr8.3:31819199-31819218 MS.gene056520:intron 45.0%
AGATAACAGTTACTACCCCG+AGG + chr8.3:31818150-31818169 MS.gene056520:CDS 45.0%
CAGGCACTTCGATCAGAAAT+TGG + chr8.3:31819903-31819922 MS.gene056520:intron 45.0%
CATCCTATTCTCGTCTTGCA+GGG + chr8.3:31819200-31819219 MS.gene056520:intron 45.0%
CCATATGTACTGTTCCTGTC+GGG + chr8.3:31819728-31819747 MS.gene056520:intron 45.0%
CTGATACCATCCTCAAGGTA+AGG + chr8.3:31816339-31816358 MS.gene056520:intron 45.0%
CTTGATGCGCATAACCACAA+TGG + chr8.3:31817867-31817886 MS.gene056520:CDS 45.0%
GAGAAACCTTACCTTGAGGA+TGG - chr8.3:31816348-31816367 None:intergenic 45.0%
GGGAAGATATGGTTCTTTGG+AGG + chr8.3:31816303-31816322 MS.gene056520:CDS 45.0%
GGGACAATGTAAAAACCTCG+GGG - chr8.3:31818168-31818187 None:intergenic 45.0%
TATATCGTCAATGCTGGTCC+TGG + chr8.3:31818275-31818294 MS.gene056520:CDS 45.0%
TCAAGAAACTTCTGAGCAGC+AGG - chr8.3:31818320-31818339 None:intergenic 45.0%
TGATCAACTGAGGCTAAACG+AGG - chr8.3:31819311-31819330 None:intergenic 45.0%
TGGAACTGATACCATCCTCA+AGG + chr8.3:31816334-31816353 MS.gene056520:CDS 45.0%
TTAGGTCTAGTAAGGGTCCA+TGG + chr8.3:31818743-31818762 MS.gene056520:CDS 45.0%
TTGTGGTTATGCGCATCAAG+CGG - chr8.3:31817867-31817886 None:intergenic 45.0%
TTTGATGCAATGGAGCATGC+TGG - chr8.3:31817949-31817968 None:intergenic 45.0%
! CAAAGCATCTTCCTAAAGCC+AGG - chr8.3:31818296-31818315 None:intergenic 45.0%
!! CTGGCTTTAGGAAGATGCTT+TGG + chr8.3:31818294-31818313 MS.gene056520:CDS 45.0%
!!! ATATTTTTTCAATAATATTT+TGG + chr8.3:31819792-31819811 MS.gene056520:intron 5.0%
ACCTACTGCTGCGAATCTCT+TGG + chr8.3:31818111-31818130 MS.gene056520:CDS 50.0%
CACGAGCCACCCAAAAAATC+TGG - chr8.3:31818697-31818716 None:intergenic 50.0%
CCAAGCCTCTCGATGTAAAC+TGG - chr8.3:31817829-31817848 None:intergenic 50.0%
CCAGTTTACATCGAGAGGCT+TGG + chr8.3:31817826-31817845 MS.gene056520:CDS 50.0%
CCCGACAGGAACAGTACATA+TGG - chr8.3:31819731-31819750 None:intergenic 50.0%
CGATACTAATCACACCCGAC+AGG - chr8.3:31819745-31819764 None:intergenic 50.0%
CTGGAGAAGGTGGATGTCTT+AGG + chr8.3:31818725-31818744 MS.gene056520:CDS 50.0%
GCCTCTCGATGTAAACTGGT+CGG - chr8.3:31817825-31817844 None:intergenic 50.0%
GCTCCATTGCATCAAAGCGA+TGG + chr8.3:31817953-31817972 MS.gene056520:CDS 50.0%
GGTGGCTCGTGTAAATGTTC+TGG + chr8.3:31818706-31818725 MS.gene056520:CDS 50.0%
! TCAATGCTGGTCCTGGCTTT+AGG + chr8.3:31818282-31818301 MS.gene056520:CDS 50.0%
AAGGTACGGGTGTGTCTTGC+AGG + chr8.3:31819594-31819613 MS.gene056520:intron 55.0%
AGGTACGGGTGTGTCTTGCA+GGG + chr8.3:31819595-31819614 MS.gene056520:intron 55.0%
CGTCCCTGCAAGACGAGAAT+AGG - chr8.3:31819206-31819225 None:intergenic 55.0%
CTCTCTCGAACTCCTGGACA+TGG - chr8.3:31817909-31817928 None:intergenic 55.0%
GCAAGACACACCCGTACCTT+TGG - chr8.3:31819594-31819613 None:intergenic 55.0%
GCCAAGAGATTCGCAGCAGT+AGG - chr8.3:31818115-31818134 None:intergenic 55.0%
GCCGACCAGTTTACATCGAG+AGG + chr8.3:31817821-31817840 MS.gene056520:CDS 55.0%
GGAGTTCGAGAGAGCTCTAC+AGG + chr8.3:31817915-31817934 MS.gene056520:CDS 55.0%
GTAGAGCTCTCTCGAACTCC+TGG - chr8.3:31817915-31817934 None:intergenic 55.0%
GTTATGCGCATCAAGCGGCT+AGG - chr8.3:31817862-31817881 None:intergenic 55.0%
GGTACGGGTGTGTCTTGCAG+GGG + chr8.3:31819596-31819615 MS.gene056520:intron 60.0%
GTACGGGTGTGTCTTGCAGG+GGG + chr8.3:31819597-31819616 MS.gene056520:intron 60.0%
TACGGGTGTGTCTTGCAGGG+GGG + chr8.3:31819598-31819617 MS.gene056520:intron 60.0%
ACGGGTGTGTCTTGCAGGGG+GGG + chr8.3:31819599-31819618 MS.gene056520:intron 65.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 31815783 31820628 31815783 ID=MS.gene056520
chr8.3 mRNA 31815783 31820628 31815783 ID=MS.gene056520.t1;Parent=MS.gene056520
chr8.3 exon 31815783 31815789 31815783 ID=MS.gene056520.t1.exon1;Parent=MS.gene056520.t1
chr8.3 CDS 31815783 31815789 31815783 ID=cds.MS.gene056520.t1;Parent=MS.gene056520.t1
chr8.3 exon 31815884 31816154 31815884 ID=MS.gene056520.t1.exon2;Parent=MS.gene056520.t1
chr8.3 CDS 31815884 31816154 31815884 ID=cds.MS.gene056520.t1;Parent=MS.gene056520.t1
chr8.3 exon 31816256 31816355 31816256 ID=MS.gene056520.t1.exon3;Parent=MS.gene056520.t1
chr8.3 CDS 31816256 31816355 31816256 ID=cds.MS.gene056520.t1;Parent=MS.gene056520.t1
chr8.3 exon 31817748 31818014 31817748 ID=MS.gene056520.t1.exon4;Parent=MS.gene056520.t1
chr8.3 CDS 31817748 31818014 31817748 ID=cds.MS.gene056520.t1;Parent=MS.gene056520.t1
chr8.3 exon 31818094 31818171 31818094 ID=MS.gene056520.t1.exon5;Parent=MS.gene056520.t1
chr8.3 CDS 31818094 31818171 31818094 ID=cds.MS.gene056520.t1;Parent=MS.gene056520.t1
chr8.3 exon 31818260 31818364 31818260 ID=MS.gene056520.t1.exon6;Parent=MS.gene056520.t1
chr8.3 CDS 31818260 31818364 31818260 ID=cds.MS.gene056520.t1;Parent=MS.gene056520.t1
chr8.3 exon 31818552 31818601 31818552 ID=MS.gene056520.t1.exon7;Parent=MS.gene056520.t1
chr8.3 CDS 31818552 31818601 31818552 ID=cds.MS.gene056520.t1;Parent=MS.gene056520.t1
chr8.3 exon 31818687 31818786 31818687 ID=MS.gene056520.t1.exon8;Parent=MS.gene056520.t1
chr8.3 CDS 31818687 31818786 31818687 ID=cds.MS.gene056520.t1;Parent=MS.gene056520.t1
chr8.3 exon 31818888 31818980 31818888 ID=MS.gene056520.t1.exon9;Parent=MS.gene056520.t1
chr8.3 CDS 31818888 31818980 31818888 ID=cds.MS.gene056520.t1;Parent=MS.gene056520.t1
chr8.3 exon 31819221 31819337 31819221 ID=MS.gene056520.t1.exon10;Parent=MS.gene056520.t1
chr8.3 CDS 31819221 31819337 31819221 ID=cds.MS.gene056520.t1;Parent=MS.gene056520.t1
chr8.3 exon 31819449 31819596 31819449 ID=MS.gene056520.t1.exon11;Parent=MS.gene056520.t1
chr8.3 CDS 31819449 31819596 31819449 ID=cds.MS.gene056520.t1;Parent=MS.gene056520.t1
chr8.3 exon 31819906 31820282 31819906 ID=MS.gene056520.t1.exon12;Parent=MS.gene056520.t1
chr8.3 CDS 31819906 31820282 31819906 ID=cds.MS.gene056520.t1;Parent=MS.gene056520.t1
chr8.3 exon 31820367 31820441 31820367 ID=MS.gene056520.t1.exon13;Parent=MS.gene056520.t1
chr8.3 CDS 31820367 31820441 31820367 ID=cds.MS.gene056520.t1;Parent=MS.gene056520.t1
chr8.3 exon 31820593 31820628 31820593 ID=MS.gene056520.t1.exon14;Parent=MS.gene056520.t1
chr8.3 CDS 31820593 31820628 31820593 ID=cds.MS.gene056520.t1;Parent=MS.gene056520.t1
Gene Sequence

>MS.gene056520

ATGTCAGGTATAATATATATACACTCTTCAAATCAAATTAGTTATTAATTATTGCTGTTTTTTCTTCTTCTTCTTATTGTTGAAATGTGATATGAAAATAGGGGTGGAAGAAAGTGTTGTTATTGTTGAAGAAGAGAACTCAGAAGATGAGAGATTAAGAAGGTCAAGAATAAGAAGGCTGAAGAAGAAAGCAATAAATGCTTCATGTAGATTCACTCATTCTCTCAAGAAAACAAGAGGGAAAAGCAAAATTGATTATAGGTTTCCAATTGAAGATGATAGAGATGAACAAGAGGAATCAGCTGTGTTTCAACTGCGTCATTCTTTGCTTCATATGCCTCCTAATCATGATCATTATCACACACTCTTGAGGTATTTTCTTTCTTTACATTTTTCAATTAAATTAATTTACTATTTTGTCTGTTTACTTATTCAATGAGTGTTTCTGAAAGAGCATTTTGGTTTATTATTAGGTTTTTGAAAGCAAGGGATTTTAACATTGAGAAGACCATTCAGATGTGGGAAGATATGGTTCTTTGGAGGAAACAATTTGGAACTGATACCATCCTCAAGGTAAGGTTTCTCTTTCTATTTTCTTAAAAGGTTTAACTGTACTTTTAGTCCTCTTAATTTCACCATTTTCCAAAATTGGTCCCAGTTTTGGTCCTCCATCAAATATTTGGGCTAAGATAGGGTGTATGTGTCATGTTTTAAATGCAATTTTTAAGAAGAAAAAAAAATTTACAATTTTGATTAATGTTGGTATTTCTCCATCATCAGATAATATGTCAAGTCATTAAAAACATATTTTATTTATTTTTTGACAAAATATCAATGTTATTATGTTGATTGTTAATTTGGACCACTTCTAACACTTCACTCATTAACTCTCCCAAATTAGTCAACAAATCAACCTTATATTCATTTTCTAACCATTTTAGTTCATTAAACTCATTTTATCATAGAAATCAGTTATAGACGTAACAATTTTAGACGCTTAATTTGAGACATAAGGAGTAATTAATTTTGTTGCATTGGATGCTCCTGTTTACAAAATCATGAGAATTAAGAAAGTTAATTATAATATAAAATTTGTTAATAAATGCTGTTTTATTTTTCAAATTTATCCTCCATAAAATACAATTAATTTATCTTTCTCAAAATTTGAACTGAGTCTTGTTAAAAGGAACAAGAAAATTTTTAAGAGTGACTTTTATTCAGGGAGAGTGTTGGTACATTAGTACTGTTTTGTTTTTTTGCTTGTAGTACGGATTATGGTTGGATATTTATTGATTATAGTACTGGTTAGACTCTGGACATTTAGTGCAAGATTTAACGACCTCATAAATGTTCTACAATTATTCAGTGAATTAACAACCTATTAAATGTTCTACAATCAATCACTGGTAGTAGGATTGCACAGTAGCAGCTACCTGATCTAAAAAAAGCTAAGATTAATGTCTATGGTCTTAATTTTATTAAATTTAAATCCCTACAATGTTTAGCATATTCTTAGAAAAGTATGGATACTGTTAGAGCATTAAATTAGAGTAATTGGATCTTCTCTAAATTTCATCATTAACAGGTTGCATTGGAAAGTGTTCTCTAAATGTACATAAGAGGATCCAAATCAGTAAAGAAACATGCTGTAAAAAAAATAAAAAATTAGAACTGTTAACTATACACACTCTTCAAAAATTGGTGCATGTATTTCAAAGCTAGTACTATTTAGATTGACTTTTAAAAAAAATAAAATTTGACTATAACAATGAAAAGTAGTGTTTTCTGTTTTCTTCAAAGGAAGTTTTGCAATTAAAGGGAATATATACAAGTTTAACTCAATGGTCATTATTCGATAATCATACGATGATGTGTGATGATTGCATGTGTATTTTAGAATCAGCAGTATTCTATATATGCTAGGATGAACTTGAGTTGACTAAATGTATCTGATGATATTTGAAGGATTTTGAATTTGAAGAGCTAGAAGAAGTATTGCAATATTACCCTCAAGGTTATCATGGAGTTGATAAGGAAGGCCGACCAGTTTACATCGAGAGGCTTGGAAAAGCTTATCCTAGCCGCTTGATGCGCATAACCACAATGGATCGATATTTAAAATACCATGTCCAGGAGTTCGAGAGAGCTCTACAGGAGAAATTTCCAGCATGCTCCATTGCATCAAAGCGATGGATTTCTTCAACCACAACAATATTAGATGTACATGGCTTGGTATGTAGGATATTCATTTACTAAAATTGTGTGCCTAATCAATAAAAATGTTGTATTGATAATGTCATGTGTAATACAGGGAATGAAGAATTTCTCACCTACTGCTGCGAATCTCTTGGCTGCTATCACAAAAATAGATAACAGTTACTACCCCGAGGTTTTTACATTGTCCCTTCCCAAATTAAAATAACGTCAATTTTAGTCATCTTGCTATGTAAACTAACTCCGTCAACATGTATTTGCAGACATTACATCAAATGTATATCGTCAATGCTGGTCCTGGCTTTAGGAAGATGCTTTGGCCTGCTGCTCAGAAGTTTCTTGACGCCAAAACTATCGCAAAGATACAGGTGAAGAATATATATTTTAACTTGTTGCTGGCAGTATTTCATACTCCCTCTGTAACAAAAAATACAGGCAAAAAAGTATATGTATCTGGTCCAAATTTAAACCTGATACATGTATTGTTTTTGCTTATATTTACAGAGGCTTTACCTGAAGTCCTACTGATAATGCATTACTTTCATGAATTTTCAGGTTCTTGAACCAAAGTCTTTATTTAAATTACATGATATCATCGACTCTAGGTATGTATCTCTGCCTTCATCATACTACATTGTATTTCTATTGAGATGGTTGCTTACTTTGTAGTTTGTAAATGCATTTGTACAGTCAATTGCCAGATTTTTTGGGTGGCTCGTGTAAATGTTCTGGAGAAGGTGGATGTCTTAGGTCTAGTAAGGGTCCATGGAATGATCCTAATATAATGAAGGTAATAATGGTCTACTATCTTTTAGAAATATCTACAGAATAAAATTAGTTACCATGTTGAACTAGAGTATTGTGACACTAATTTGGGTATTCTGATTTTAGTTTGTTCATAATGTGGAGGCAACATTTGTAAGACAAATCCTCAAAGTTTCCGATGAACAGAAAATTGACCATTTTCAAACACACCTACAAAAGGTAAGTTCAACTCTTTTTGACAATAAATGGTTTGGATTTTAGAAGTGATTGATTTAGATGATATAATTTACTAATTTGGACTTGAGACTTAAACGGAAATTCAAAAAAGTGACCATGATGTGTACATCTTGAGACTTAAAGGACTAATATAGGATCGAACTTTAAGCACCAGAAGCATGATTTTTCCTATATGCAAATATACAATTACATGCTTTTTGACATCCTATTCTCGTCTTGCAGGGACGAAGCAGCGATATGTCAACAGCAGAATCTTGGTTAGAAATTAACGATTCTTGCTCATCCATTAGACAAAGGAAACTTAGTAATCCTCGTTTAGCCTCAGTTGATCATGAAGAAGTGAGTTTTGGAACCTTTGAACCATTTGAGAAGACTTGTTATTACATACTGCTTTTGTATCATGTTTGTGTCTTGAACCTTCAACCATTCAATATACTGTTTTATCTGCAGGCTAGGGTATCAAATAGCAACCGTAGCTGTAAAGATAATGCTTCTGGCACCGAAAAAACGCTCAAAAGAGATCAATTTCAATTTACTCAGGAACAGCCATTGCAAAATGATGATATGGGGAACATAACTTGTACAGAGAATTCCAAAGGTACGGGTGTGTCTTGCAGGGGGGGTATTTTTAAGTTTTTCAATAATCTTAATTTGGGAAATCCTAGATTGTCTTGTTTAGTTTCAAAGTTCTTACAAAAATATTCCTTTGAAAGTGGAAATTGAAACTCACCATATGTACTGTTCCTGTCGGGTGTGATTAGTATCGCATGTATTCCATGTTGAACAAATTCTCATATTTTTTCAATAATATTTTGGAACATTTGAAAGTGGAAATTGAAACTCACTAGCAAGTATTTCGGTATTTTCCTTATATTCCATGTTGAACAAATTCTCATATTTTTTACAGGCACTTCGATCAGAAATTGGTTCGGCTTTGTTAAGGAAAAAGTGAAGACAACCAATTTCTTATATGCGTCAAGTGTGCTGATATATCTTTTGGAAAGACTACATATATTCTTCCACAGTTTAGGATTAGAATTTTGGAGAACACAAAACAATATTGTGGTGGAACATAACATCAATAACCTTATAGAAGATGTCAAAACACCTTCTGAAGAGGATCGTATTCTTCCATGTATACAAGAACGTCTTCAGAAACTAGAAAAAGCATTTGTGGAACTTAGCCATAGACCTGCTGAAATACCTATGGAAAAGGAGAAAATGCTTATGAGCTCTTTGGATAGGATAAAATCTGTCGAGTTCGACCTTGAAAATACCAAGAGGGTTATTCTCTATACTTTCTTCAGTCATTTACAACTACTTGTTGTTTTGATGATATGATAATTAATTTTTTGTAATATGATGCAGGTGGTACATGATACAGTGATGAAACAAGTTGAGATTGCTGAGCTACTAGAGAATCTGAAGGCATCAAAACATCAAGTAAGTTTCTTATTGAGTAATAATAATTTATATTTATATGTTGTGCATTTAATCTTTATGAAAACTTGCTTATACTTAAGACCGCTGAATATAAGTACTATTTATTAGAAACATTTAATCTTTTTCATCTCATAAAAAATGTGTATTCTAGGAAAAACCAACCTATGTTAATTTAGGGGAGTTTTAG

Protein sequence

>MS.gene056520.t1

MSGVEESVVIVEEENSEDERLRRSRIRRLKKKAINASCRFTHSLKKTRGKSKIDYRFPIEDDRDEQEESAVFQLRHSLLHMPPNHDHYHTLLRFLKARDFNIEKTIQMWEDMVLWRKQFGTDTILKDFEFEELEEVLQYYPQGYHGVDKEGRPVYIERLGKAYPSRLMRITTMDRYLKYHVQEFERALQEKFPACSIASKRWISSTTTILDVHGLGMKNFSPTAANLLAAITKIDNSYYPETLHQMYIVNAGPGFRKMLWPAAQKFLDAKTIAKIQVLEPKSLFKLHDIIDSSQLPDFLGGSCKCSGEGGCLRSSKGPWNDPNIMKFVHNVEATFVRQILKVSDEQKIDHFQTHLQKGRSSDMSTAESWLEINDSCSSIRQRKLSNPRLASVDHEEARVSNSNRSCKDNASGTEKTLKRDQFQFTQEQPLQNDDMGNITCTENSKGTSIRNWFGFVKEKVKTTNFLYASSVLIYLLERLHIFFHSLGLEFWRTQNNIVVEHNINNLIEDVKTPSEEDRILPCIQERLQKLEKAFVELSHRPAEIPMEKEKMLMSSLDRIKSVEFDLENTKRVVHDTVMKQVEIAELLENLKASKHQEKPTYVNLGEF