Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071778.t1 | XP_024626166.1 | 91.2 | 761 | 12 | 5 | 1 | 716 | 18 | 768 | 0.00E+00 | 1364.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071778.t1 | Q9C0C7 | 38.0 | 200 | 97 | 6 | 1 | 179 | 8 | 201 | 1.3e-22 | 109.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071778.t1 | G7KYK1 | 91.2 | 761 | 12 | 5 | 1 | 716 | 18 | 768 | 0.0e+00 | 1364.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049265 | MS.gene071778 | 0.861152 | 1.25E-63 | -1.69E-46 |
| MS.gene049425 | MS.gene071778 | 0.856516 | 3.05E-62 | -1.69E-46 |
| MS.gene050397 | MS.gene071778 | -0.811889 | 5.58E-51 | -1.69E-46 |
| MS.gene050529 | MS.gene071778 | -0.822118 | 2.81E-53 | -1.69E-46 |
| MS.gene050809 | MS.gene071778 | 0.810133 | 1.34E-50 | -1.69E-46 |
| MS.gene055277 | MS.gene071778 | -0.80076 | 1.24E-48 | -1.69E-46 |
| MS.gene058158 | MS.gene071778 | 0.805832 | 1.10E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACATGAAATTAATATTTTTT+AGG | + | 51802:8022-8041 | MS.gene071778:intron | 10.0% |
| !! | AAAAAAAAACTAATCACAAA+GGG | - | 51802:5008-5027 | MS.gene071778:intergenic | 15.0% |
| !! | ACAAAAAAAATTAGTAATAG+TGG | - | 51802:5449-5468 | MS.gene071778:intergenic | 15.0% |
| !! | ATTATGTTTAAACTTAACAA+AGG | - | 51802:7766-7785 | MS.gene071778:intergenic | 15.0% |
| !! | TTCAATTTAAACTAATAATG+AGG | - | 51802:4983-5002 | MS.gene071778:intergenic | 15.0% |
| !! | TTTAGCACATAAATTAAAAT+TGG | - | 51802:5260-5279 | MS.gene071778:intergenic | 15.0% |
| !! | AAAAAGTCAATCATGAAATA+AGG | - | 51802:7586-7605 | MS.gene071778:intergenic | 20.0% |
| !! | AAATCATACAAAACTACAAT+AGG | - | 51802:7976-7995 | MS.gene071778:intergenic | 20.0% |
| !! | AATAGATGCATAATAAATTC+AGG | - | 51802:5156-5175 | MS.gene071778:intergenic | 20.0% |
| !! | CAAAAAAAAACTAATCACAA+AGG | - | 51802:5009-5028 | MS.gene071778:intergenic | 20.0% |
| !! | CAATGCACATAATAAATAAA+AGG | - | 51802:7638-7657 | MS.gene071778:intergenic | 20.0% |
| !! | TCATTAAAGATGAAAAACAT+GGG | - | 51802:5622-5641 | MS.gene071778:intergenic | 20.0% |
| !! | TTAACAATTAAGCAATTCAA+GGG | - | 51802:8251-8270 | MS.gene071778:intergenic | 20.0% |
| !! | TTCATTAAAGATGAAAAACA+TGG | - | 51802:5623-5642 | MS.gene071778:intergenic | 20.0% |
| !! | TTGTCTTTAACACAAAAATT+GGG | - | 51802:5753-5772 | MS.gene071778:intergenic | 20.0% |
| !! | TTTCTGTTTGATGAATTTAT+TGG | + | 51802:5492-5511 | MS.gene071778:intron | 20.0% |
| !!! | ACTGCATTTTTAATTCATTA+TGG | - | 51802:7670-7689 | MS.gene071778:intergenic | 20.0% |
| !!! | TTGTTTTTCTTGTATTGATT+GGG | + | 51802:5468-5487 | MS.gene071778:intron | 20.0% |
| ! | AAAATTAGTAATAGTGGCAA+AGG | - | 51802:5443-5462 | MS.gene071778:intergenic | 25.0% |
| ! | AAGTATTTGTATCTTTGACT+TGG | - | 51802:7614-7633 | MS.gene071778:intergenic | 25.0% |
| ! | AATTAACATAGTGAATAGCA+TGG | - | 51802:5872-5891 | MS.gene071778:intergenic | 25.0% |
| ! | ACCTATATATACAGTATTAG+AGG | + | 51802:7933-7952 | MS.gene071778:CDS | 25.0% |
| ! | AGAAAGTAAATATACAGAAG+TGG | - | 51802:5393-5412 | MS.gene071778:intergenic | 25.0% |
| ! | ATTAACATAGTGAATAGCAT+GGG | - | 51802:5871-5890 | MS.gene071778:intergenic | 25.0% |
| ! | CCTATATATACAGTATTAGA+GGG | + | 51802:7934-7953 | MS.gene071778:CDS | 25.0% |
| ! | CTTGTCTTTAACACAAAAAT+TGG | - | 51802:5754-5773 | MS.gene071778:intergenic | 25.0% |
| ! | GTTAACAATTAAGCAATTCA+AGG | - | 51802:8252-8271 | MS.gene071778:intergenic | 25.0% |
| ! | TAACAACCTACAATAACAAA+GGG | - | 51802:7696-7715 | MS.gene071778:intergenic | 25.0% |
| ! | TGTTTAAATACCATGACAAT+AGG | - | 51802:4751-4770 | MS.gene071778:intergenic | 25.0% |
| ! | TTAACAACCTACAATAACAA+AGG | - | 51802:7697-7716 | MS.gene071778:intergenic | 25.0% |
| !! | AACTTTTTGCTTGTAATTGT+AGG | + | 51802:8269-8288 | MS.gene071778:intron | 25.0% |
| !! | AAGCATTTACTATTTTCTTC+TGG | + | 51802:7346-7365 | MS.gene071778:intron | 25.0% |
| !! | ATCTTTGAAAATGATCCTTA+GGG | + | 51802:4820-4839 | MS.gene071778:intron | 25.0% |
| !! | CAATTTTTGTGTTAAAGACA+AGG | + | 51802:5752-5771 | MS.gene071778:intron | 25.0% |
| !! | GATACTTGTTAAACAGATTT+GGG | + | 51802:7409-7428 | MS.gene071778:intron | 25.0% |
| !! | TTGTAAAGCAATTTTGTTCA+TGG | + | 51802:7786-7805 | MS.gene071778:intron | 25.0% |
| !!! | GTTGTTTTTCTTGTATTGAT+TGG | + | 51802:5467-5486 | MS.gene071778:intron | 25.0% |
| !!! | TACTATTTTCTTCTGGTTTA+AGG | + | 51802:7353-7372 | MS.gene071778:intron | 25.0% |
| !!! | TTGAATTTGCTTTGTGTTTT+AGG | + | 51802:8072-8091 | MS.gene071778:intron | 25.0% |
| !!! | TTTTTGTTTGTTATGTGTAG+TGG | + | 51802:5023-5042 | MS.gene071778:intron | 25.0% |
| AGGATATTGTAAGTAACCAA+TGG | - | 51802:5989-6008 | MS.gene071778:intergenic | 30.0% | |
| AGGTACTAAAGAACAATACT+TGG | - | 51802:4876-4895 | MS.gene071778:intergenic | 30.0% | |
| ATAATAAATTCAGGCAGACA+GGG | - | 51802:5147-5166 | MS.gene071778:intergenic | 30.0% | |
| ATGAAAAACGTAACTTCAGA+AGG | - | 51802:7033-7052 | MS.gene071778:intergenic | 30.0% | |
| ATTACACTAGAACTAATCTG+TGG | - | 51802:6640-6659 | MS.gene071778:intergenic | 30.0% | |
| ATTCCAGAACACAATATAAG+AGG | - | 51802:5676-5695 | MS.gene071778:intergenic | 30.0% | |
| ATTCCTTCTGTAAACAACAA+AGG | - | 51802:5220-5239 | MS.gene071778:intergenic | 30.0% | |
| CATACAAAACTACAATAGGT+AGG | - | 51802:7972-7991 | MS.gene071778:intergenic | 30.0% | |
| CCCTCTAATACTGTATATAT+AGG | - | 51802:7937-7956 | MS.gene071778:intergenic | 30.0% | |
| GGATATGAAGAAGAAAAAGA+AGG | - | 51802:7565-7584 | MS.gene071778:intergenic | 30.0% | |
| GGTATATAGAGTTTCAGATA+TGG | + | 51802:8093-8112 | MS.gene071778:intron | 30.0% | |
| TCTCTTAATGGTATGTTACA+TGG | + | 51802:6429-6448 | MS.gene071778:CDS | 30.0% | |
| TGAAGAAGAAAAAGAAGGTT+CGG | - | 51802:7560-7579 | MS.gene071778:intergenic | 30.0% | |
| TTAAAGATGAAAAACATGGG+AGG | - | 51802:5619-5638 | MS.gene071778:intergenic | 30.0% | |
| TTAACACAAAAATTGGGAGT+AGG | - | 51802:5747-5766 | MS.gene071778:intergenic | 30.0% | |
| TTCCAGAACACAATATAAGA+GGG | - | 51802:5675-5694 | MS.gene071778:intergenic | 30.0% | |
| TTTATGTGCTAAATGACTAC+AGG | + | 51802:5267-5286 | MS.gene071778:intron | 30.0% | |
| TTTCAAAGATGTTAGTCAAG+AGG | - | 51802:4810-4829 | MS.gene071778:intergenic | 30.0% | |
| ! | AACAAAGGTATGACTTTACT+GGG | + | 51802:8201-8220 | MS.gene071778:intron | 30.0% |
| ! | AATTACCTTTTCTACAAGGA+TGG | + | 51802:6541-6560 | MS.gene071778:CDS | 30.0% |
| ! | CATCTTTGAAAATGATCCTT+AGG | + | 51802:4819-4838 | MS.gene071778:intron | 30.0% |
| ! | CGATACTTGTTAAACAGATT+TGG | + | 51802:7408-7427 | MS.gene071778:intron | 30.0% |
| ! | TTTCAGATATGGAACTTGTT+AGG | + | 51802:8104-8123 | MS.gene071778:CDS | 30.0% |
| ! | TTTTGCTTGTAATTGTAGGA+AGG | + | 51802:8273-8292 | MS.gene071778:intron | 30.0% |
| !! | ACAGATTAGTTCTAGTGTAA+TGG | + | 51802:6639-6658 | MS.gene071778:intron | 30.0% |
| !! | ATGTCTTTAATTTGCTTGCA+CGG | + | 51802:4675-4694 | MS.gene071778:CDS | 30.0% |
| !! | CTTAAAAGCATTGTCATTGA+TGG | + | 51802:7898-7917 | MS.gene071778:CDS | 30.0% |
| !! | TTCAGATATGGAACTTGTTA+GGG | + | 51802:8105-8124 | MS.gene071778:CDS | 30.0% |
| AAACACAAGTTCATTCACCT+CGG | - | 51802:5833-5852 | MS.gene071777:intergenic | 35.0% | |
| AAGAAAGGCAATGACACATT+AGG | - | 51802:6075-6094 | MS.gene071778:intergenic | 35.0% | |
| AAGATAATCGACTGTGAAAC+TGG | + | 51802:5059-5078 | MS.gene071778:CDS | 35.0% | |
| AATAGAAGCAGCAAGATTTC+CGG | - | 51802:6803-6822 | MS.gene071778:intergenic | 35.0% | |
| AATTGTAGGAAGGAAAGCTT+AGG | + | 51802:8283-8302 | MS.gene071778:intron | 35.0% | |
| ACATTTGTGACAAAAACAGC+AGG | - | 51802:6015-6034 | MS.gene071778:intergenic | 35.0% | |
| ACCATTAAGAGAACTTGCAT+CGG | - | 51802:6421-6440 | MS.gene071778:intergenic | 35.0% | |
| ACTGCTTTCTCTAATGGAAT+GGG | + | 51802:6312-6331 | MS.gene071778:CDS | 35.0% | |
| AGTCGATTATCTTTACTGTG+TGG | - | 51802:5052-5071 | MS.gene071778:intergenic | 35.0% | |
| ATCATCCATCCTTGTAGAAA+AGG | - | 51802:6549-6568 | MS.gene071778:intergenic | 35.0% | |
| ATTAGAGAAAGCAGTATGCA+CGG | - | 51802:6307-6326 | MS.gene071778:intergenic | 35.0% | |
| ATTATGGGATGCTAACACAT+CGG | + | 51802:5351-5370 | MS.gene071778:CDS | 35.0% | |
| CATAATAAATTCAGGCAGAC+AGG | - | 51802:5148-5167 | MS.gene071778:intergenic | 35.0% | |
| CTTCTGTAAGATCAGGTTTA+CGG | + | 51802:6740-6759 | MS.gene071778:CDS | 35.0% | |
| CTTGTTAAACAGATTTGGGT+TGG | + | 51802:7413-7432 | MS.gene071778:intron | 35.0% | |
| GACAAAGTAACATGTTCTGT+AGG | - | 51802:6042-6061 | MS.gene071778:intergenic | 35.0% | |
| GGATCAAGAAGTTCGATTAT+GGG | + | 51802:5336-5355 | MS.gene071778:CDS | 35.0% | |
| TACCCTCTTATATTGTGTTC+TGG | + | 51802:5670-5689 | MS.gene071778:intron | 35.0% | |
| TACTGCTTTCTCTAATGGAA+TGG | + | 51802:6311-6330 | MS.gene071778:CDS | 35.0% | |
| TCAGAAAAACTACTACCTTG+TGG | - | 51802:5593-5612 | MS.gene071778:intergenic | 35.0% | |
| TCTATTAATACCCCACATGA+TGG | + | 51802:6817-6836 | MS.gene071778:CDS | 35.0% | |
| TGAAAAGCAATGGATGCAAT+TGG | - | 51802:5537-5556 | MS.gene071778:intergenic | 35.0% | |
| TGGATCAAGAAGTTCGATTA+TGG | + | 51802:5335-5354 | MS.gene071778:CDS | 35.0% | |
| TTCTCTAATGGAATGGGAAT+TGG | + | 51802:6318-6337 | MS.gene071778:CDS | 35.0% | |
| TTTCTACAAGGATGGATGAT+GGG | + | 51802:6549-6568 | MS.gene071778:CDS | 35.0% | |
| TTTGCACTTTGCAGTGAAAT+GGG | + | 51802:7104-7123 | MS.gene071778:intron | 35.0% | |
| ! | ACAAAGGTATGACTTTACTG+GGG | + | 51802:8202-8221 | MS.gene071778:intron | 35.0% |
| ! | ATCCACAAATACTTGCTAGT+GGG | + | 51802:5308-5327 | MS.gene071778:CDS | 35.0% |
| ! | GAACAAAGGTATGACTTTAC+TGG | + | 51802:8200-8219 | MS.gene071778:intron | 35.0% |
| ! | GGTGAATGAACTTGTGTTTT+TGG | + | 51802:5834-5853 | MS.gene071778:intron | 35.0% |
| ! | TGGGAATTACCTTTTCTACA+AGG | + | 51802:6537-6556 | MS.gene071778:CDS | 35.0% |
| ! | TTTTCTACAAGGATGGATGA+TGG | + | 51802:6548-6567 | MS.gene071778:CDS | 35.0% |
| !! | AGTGAACCCTTTGTTATTGT+AGG | + | 51802:7687-7706 | MS.gene071778:intron | 35.0% |
| !! | ATAACTTGGTGTGCTGATAT+TGG | - | 51802:7263-7282 | MS.gene071778:intergenic | 35.0% |
| !! | CGTTGCTTAAAGGTGTTAAT+TGG | + | 51802:5083-5102 | MS.gene071778:CDS | 35.0% |
| !! | CTTGCTACATGTTTTGTTCT+CGG | - | 51802:4713-4732 | MS.gene071778:intergenic | 35.0% |
| !! | TTGCCTTTGTTGTTTACAGA+AGG | + | 51802:5214-5233 | MS.gene071778:intron | 35.0% |
| AAAGGCAATGACACATTAGG+TGG | - | 51802:6072-6091 | MS.gene071778:intergenic | 40.0% | |
| AAAGGTAATTCCCATCCACT+TGG | - | 51802:6531-6550 | MS.gene071778:intergenic | 40.0% | |
| AACAGACCTGAATTGAAGTC+AGG | - | 51802:7473-7492 | MS.gene071778:intergenic | 40.0% | |
| AAGGTAATTCCCATCCACTT+GGG | - | 51802:6530-6549 | MS.gene071778:intergenic | 40.0% | |
| AATCTCCAAGACTGTATCCA+TGG | - | 51802:6253-6272 | MS.gene071778:intergenic | 40.0% | |
| AATGGAATGGGAATTGGCAT+CGG | + | 51802:6324-6343 | MS.gene071778:CDS | 40.0% | |
| ACATCTGTCAGCATTTAGTG+GGG | - | 51802:6975-6994 | MS.gene071778:intergenic | 40.0% | |
| ACCAAGTTATGTATGAGCTG+CGG | + | 51802:7273-7292 | MS.gene071778:CDS | 40.0% | |
| ACCGATGCAAGTTCTCTTAA+TGG | + | 51802:6417-6436 | MS.gene071778:CDS | 40.0% | |
| ACCTGATCTTACAGAAGATC+CGG | - | 51802:6737-6756 | MS.gene071778:intergenic | 40.0% | |
| ACTAATTGCAACTTACTGCG+TGG | - | 51802:4954-4973 | MS.gene071778:intergenic | 40.0% | |
| AGATTTCCGGATTCAGATAC+AGG | - | 51802:6790-6809 | MS.gene071778:intergenic | 40.0% | |
| AGGTGTTAATTGGCCATATG+AGG | + | 51802:5093-5112 | MS.gene071778:CDS | 40.0% | |
| ATACCAGACTCTTGATGTAC+TGG | - | 51802:7218-7237 | MS.gene071778:intergenic | 40.0% | |
| ATATCGTGCAGCTGTACATA+TGG | + | 51802:5696-5715 | MS.gene071778:intron | 40.0% | |
| ATATGGCACTACGACAAGAA+AGG | + | 51802:5713-5732 | MS.gene071778:intron | 40.0% | |
| ATCTCCAAGACTGTATCCAT+GGG | - | 51802:6252-6271 | MS.gene071778:intergenic | 40.0% | |
| CTAGACAAACCGCAAATCAT+GGG | + | 51802:6457-6476 | MS.gene071778:CDS | 40.0% | |
| CTCGACTCATCAACAGAATA+CGG | - | 51802:6108-6127 | MS.gene071778:intergenic | 40.0% | |
| GAAAATGATCCTTAGGGTTG+AGG | + | 51802:4826-4845 | MS.gene071778:intron | 40.0% | |
| GACATCTGTCAGCATTTAGT+GGG | - | 51802:6976-6995 | MS.gene071778:intergenic | 40.0% | |
| GCAAGTATTTGTGGATGCAA+TGG | - | 51802:5304-5323 | MS.gene071778:intergenic | 40.0% | |
| GCTACATCAGCATTAGAAGT+GGG | - | 51802:6676-6695 | MS.gene071778:intergenic | 40.0% | |
| GGGTCTCTTGAAGAAACAAA+CGG | - | 51802:6510-6529 | MS.gene071778:intergenic | 40.0% | |
| GTATTGCAACATCACCAACT+CGG | + | 51802:7234-7253 | MS.gene071778:CDS | 40.0% | |
| GTATTTGTGGATGCAATGGA+TGG | - | 51802:5300-5319 | MS.gene071778:intergenic | 40.0% | |
| GTGCATACTGCTTTCTCTAA+TGG | + | 51802:6306-6325 | MS.gene071778:CDS | 40.0% | |
| GTGCTAAATGACTACAGGTT+AGG | + | 51802:5272-5291 | MS.gene071778:intron | 40.0% | |
| GTTTGCACTTTGCAGTGAAA+TGG | + | 51802:7103-7122 | MS.gene071778:intron | 40.0% | |
| TAAAGACAAGGCGATCTCTA+CGG | + | 51802:5764-5783 | MS.gene071778:intron | 40.0% | |
| TAGACAAACCGCAAATCATG+GGG | + | 51802:6458-6477 | MS.gene071778:CDS | 40.0% | |
| TCATGTCCTGACTTCAATTC+AGG | + | 51802:7464-7483 | MS.gene071778:CDS | 40.0% | |
| TCTAGACAAACCGCAAATCA+TGG | + | 51802:6456-6475 | MS.gene071778:CDS | 40.0% | |
| TGAAACTGGACGTTGCTTAA+AGG | + | 51802:5073-5092 | MS.gene071778:CDS | 40.0% | |
| TGATACTATAGTGTCTCCCA+TGG | + | 51802:6233-6252 | MS.gene071778:CDS | 40.0% | |
| TGCTACATCAGCATTAGAAG+TGG | - | 51802:6677-6696 | MS.gene071778:intergenic | 40.0% | |
| TGTACTGGAGTTTGTAATCC+AGG | - | 51802:7203-7222 | MS.gene071778:intergenic | 40.0% | |
| TTAGAGAAAGCAGTATGCAC+GGG | - | 51802:6306-6325 | MS.gene071778:intergenic | 40.0% | |
| TTCACTGCAAAGTGCAAACA+CGG | - | 51802:7102-7121 | MS.gene071778:intergenic | 40.0% | |
| TTCAGATTCCTCAATGACAG+AGG | + | 51802:5957-5976 | MS.gene071778:CDS | 40.0% | |
| TTTGTGACAAAAACAGCAGG+TGG | - | 51802:6012-6031 | MS.gene071778:intergenic | 40.0% | |
| ! | CAAAGGTATGACTTTACTGG+GGG | + | 51802:8203-8222 | MS.gene071778:intron | 40.0% |
| ! | CATCCACAAATACTTGCTAG+TGG | + | 51802:5307-5326 | MS.gene071778:CDS | 40.0% |
| ! | GATGCAAGAACTTTTCCATC+TGG | - | 51802:4932-4951 | MS.gene071778:intergenic | 40.0% |
| ! | TAAGAGAACTTGCATCGGTA+GGG | - | 51802:6416-6435 | MS.gene071778:intergenic | 40.0% |
| ! | TGCTGCGCCATATCTTTTAA+CGG | + | 51802:5807-5826 | MS.gene071778:CDS | 40.0% |
| ! | TTAAGAGAACTTGCATCGGT+AGG | - | 51802:6417-6436 | MS.gene071778:intergenic | 40.0% |
| !! | CATTGCTTTTCATGCCAAAG+GGG | + | 51802:5545-5564 | MS.gene071778:CDS | 40.0% |
| !! | CCATTGCTTTTCATGCCAAA+GGG | + | 51802:5544-5563 | MS.gene071778:CDS | 40.0% |
| !! | TCCATTGCTTTTCATGCCAA+AGG | + | 51802:5543-5562 | MS.gene071778:CDS | 40.0% |
| !!! | GGAGTCATTTTTCACACTCA+CGG | + | 51802:6761-6780 | MS.gene071778:CDS | 40.0% |
| AAAAGATATGGCGCAGCATG+AGG | - | 51802:5805-5824 | MS.gene071777:intergenic | 45.0% | |
| AAAGACAAGGCGATCTCTAC+GGG | + | 51802:5765-5784 | MS.gene071778:intron | 45.0% | |
| AAAGATATGGCGCAGCATGA+GGG | - | 51802:5804-5823 | MS.gene071778:intergenic | 45.0% | |
| AAATCATGGGGTTCATCCAG+AGG | + | 51802:6470-6489 | MS.gene071778:CDS | 45.0% | |
| AACGGCAATGATTTCCCCTT+TGG | - | 51802:5562-5581 | MS.gene071778:intergenic | 45.0% | |
| ACAAATTGAGTCTTCTGCCG+TGG | + | 51802:6173-6192 | MS.gene071778:CDS | 45.0% | |
| ACCCTTAACTTCACGGTACA+AGG | - | 51802:6923-6942 | MS.gene071778:intergenic | 45.0% | |
| ACCTCGGCCGTTAAAAGATA+TGG | - | 51802:5817-5836 | MS.gene071778:intergenic | 45.0% | |
| ACTCCAGTACATCAAGAGTC+TGG | + | 51802:7212-7231 | MS.gene071778:CDS | 45.0% | |
| AGACCACACCCTTAACTTCA+CGG | - | 51802:6930-6949 | MS.gene071778:intergenic | 45.0% | |
| ATCTACCGCATGGTGAAAAG+TGG | - | 51802:7133-7152 | MS.gene071778:intergenic | 45.0% | |
| ATGCCATCTTCTGCAATGTC+TGG | + | 51802:6697-6716 | MS.gene071778:CDS | 45.0% | |
| ATTCCGACTAACTCTCAAGC+TGG | + | 51802:6270-6289 | MS.gene071778:CDS | 45.0% | |
| CCAGGATCAGCTTCTATATG+AGG | - | 51802:7185-7204 | MS.gene071778:intergenic | 45.0% | |
| CCCTTTGGCATGAAAAGCAA+TGG | - | 51802:5547-5566 | MS.gene071778:intergenic | 45.0% | |
| CCTCATATAGAAGCTGATCC+TGG | + | 51802:7182-7201 | MS.gene071778:CDS | 45.0% | |
| CCTGATCTTACAGAAGATCC+GGG | - | 51802:6736-6755 | MS.gene071778:intergenic | 45.0% | |
| CGACATCTGTCAGCATTTAG+TGG | - | 51802:6977-6996 | MS.gene071778:intergenic | 45.0% | |
| CTCCCACTAGCAAGTATTTG+TGG | - | 51802:5313-5332 | MS.gene071778:intergenic | 45.0% | |
| CTTAGGATCCTCCACTATGA+TGG | + | 51802:8300-8319 | MS.gene071778:CDS | 45.0% | |
| GAAATCATTGCCGTTGCATC+AGG | + | 51802:5567-5586 | MS.gene071778:CDS | 45.0% | |
| GACTCATCAACAGAATACGG+AGG | - | 51802:6105-6124 | MS.gene071778:intergenic | 45.0% | |
| GATGTCAGATCCATCATGTG+GGG | - | 51802:6830-6849 | MS.gene071778:intergenic | 45.0% | |
| GATTTCAAGCTTACCACCCA+AGG | - | 51802:5122-5141 | MS.gene071778:intergenic | 45.0% | |
| GCAGCTAAAAATCTACCGCA+TGG | - | 51802:7143-7162 | MS.gene071778:intergenic | 45.0% | |
| GCCTTGTACCGTGAAGTTAA+GGG | + | 51802:6919-6938 | MS.gene071778:CDS | 45.0% | |
| GGATGAAATTGACCATCCTC+TGG | - | 51802:6489-6508 | MS.gene071778:intergenic | 45.0% | |
| GGATGTCAGATCCATCATGT+GGG | - | 51802:6831-6850 | MS.gene071778:intergenic | 45.0% | |
| GGATTCGACTCATGATGGTT+TGG | - | 51802:6852-6871 | MS.gene071778:intergenic | 45.0% | |
| GTACCAGCTTGAGAGTTAGT+CGG | - | 51802:6276-6295 | MS.gene071778:intergenic | 45.0% | |
| GTCTCCTCAGGAAAGTAACT+TGG | - | 51802:8351-8370 | MS.gene071778:intergenic | 45.0% | |
| GTTTCTTCAAGAGACCCAAG+TGG | + | 51802:6513-6532 | MS.gene071778:CDS | 45.0% | |
| TCAGCATTTAGTGGGGAACA+GGG | - | 51802:6968-6987 | MS.gene071778:intergenic | 45.0% | |
| TCCGCAGCTCATACATAACT+TGG | - | 51802:7277-7296 | MS.gene071778:intergenic | 45.0% | |
| TCTACCGCATGGTGAAAAGT+GGG | - | 51802:7132-7151 | MS.gene071778:intergenic | 45.0% | |
| TCTGGCAGCATTAACATACC+CGG | + | 51802:6715-6734 | MS.gene071778:CDS | 45.0% | |
| TGACTGGATTCGACTCATGA+TGG | - | 51802:6857-6876 | MS.gene071778:intergenic | 45.0% | |
| TGCCTTGTACCGTGAAGTTA+AGG | + | 51802:6918-6937 | MS.gene071778:CDS | 45.0% | |
| TGCTGAAGATGAGGTCAATG+TGG | + | 51802:8138-8157 | MS.gene071778:CDS | 45.0% | |
| TGGATGAACCCCATGATTTG+CGG | - | 51802:6469-6488 | MS.gene071778:intergenic | 45.0% | |
| TGGATGTCAGATCCATCATG+TGG | - | 51802:6832-6851 | MS.gene071778:intergenic | 45.0% | |
| TTCAAGAGACCCAAGTGGAT+GGG | + | 51802:6518-6537 | MS.gene071778:CDS | 45.0% | |
| TTGACCTCATCTTCAGCACT+CGG | - | 51802:8136-8155 | MS.gene071778:intergenic | 45.0% | |
| TTTACTGGGGGAGATCAATG+TGG | + | 51802:8215-8234 | MS.gene071778:intron | 45.0% | |
| ! | AATACTTGCTAGTGGGAGCT+TGG | + | 51802:5315-5334 | MS.gene071778:CDS | 45.0% |
| ! | AGGAAGCATACATGCAACAC+AGG | - | 51802:7165-7184 | MS.gene071778:intergenic | 45.0% |
| ! | AGGAGTATGTGCTCAGATGT+AGG | - | 51802:7850-7869 | MS.gene071778:intergenic | 45.0% |
| ! | ATGCTTTCATCCTTTTCCCG+GGG | + | 51802:8162-8181 | MS.gene071778:CDS | 45.0% |
| ! | CATGCTTTCATCCTTTTCCC+GGG | + | 51802:8161-8180 | MS.gene071778:CDS | 45.0% |
| ! | GCATGCTTTCATCCTTTTCC+CGG | + | 51802:8160-8179 | MS.gene071778:CDS | 45.0% |
| ! | TGGACCAAGTTACTTTCCTG+AGG | + | 51802:8344-8363 | MS.gene071778:CDS | 45.0% |
| !! | CGGGCTAGTTTATGGAACAA+AGG | + | 51802:8186-8205 | MS.gene071778:CDS | 45.0% |
| !!! | AAAATTATTTTAAAAAGTAA+TGG | - | 51802:7383-7402 | MS.gene071778:intergenic | 5.0% |
| !!! | TTTTATTTTATTTTTCTTTT+TGG | + | 51802:5892-5911 | MS.gene071778:intron | 5.0% |
| ACATGCTTGCTTTGATGCGC+AGG | + | 51802:5918-5937 | MS.gene071778:intron | 50.0% | |
| AGAACCATGACGTCGACCAT+AGG | - | 51802:7875-7894 | MS.gene071778:intergenic | 50.0% | |
| ATCGGCAACCTCACAATGGA+CGG | + | 51802:6342-6361 | MS.gene071778:CDS | 50.0% | |
| ATGACAGAGGCAACGTCCAT+TGG | + | 51802:5970-5989 | MS.gene071778:CDS | 50.0% | |
| CAAAGCGTGGCCTATTGTCA+TGG | + | 51802:4738-4757 | MS.gene071778:CDS | 50.0% | |
| CAACCTCACAATGGACGGTA+TGG | + | 51802:6347-6366 | MS.gene071778:CDS | 50.0% | |
| CCCGGATCTTCTGTAAGATC+AGG | + | 51802:6733-6752 | MS.gene071778:CDS | 50.0% | |
| CGGACACCTGTATCTGAATC+CGG | + | 51802:6781-6800 | MS.gene071778:CDS | 50.0% | |
| CTGCCAGACATTGCAGAAGA+TGG | - | 51802:6703-6722 | MS.gene071778:intergenic | 50.0% | |
| CTTCAAGAGACCCAAGTGGA+TGG | + | 51802:6517-6536 | MS.gene071778:CDS | 50.0% | |
| GAGCACATACTCCTTGCCTA+TGG | + | 51802:7856-7875 | MS.gene071778:CDS | 50.0% | |
| GCCAAGGTCTACTATTGCAG+CGG | + | 51802:4898-4917 | MS.gene071778:CDS | 50.0% | |
| GCGGATATATTCCCTTGAGG+AGG | + | 51802:7292-7311 | MS.gene071778:CDS | 50.0% | |
| GCTGATATTGGATGCCGAGT+TGG | - | 51802:7251-7270 | MS.gene071778:intergenic | 50.0% | |
| GCTGCGGATATATTCCCTTG+AGG | + | 51802:7289-7308 | MS.gene071778:CDS | 50.0% | |
| GGAGACTGATGAAACCAGAC+CGG | + | 51802:6368-6387 | MS.gene071778:CDS | 50.0% | |
| GTACCGTGAAGTTAAGGGTG+TGG | + | 51802:6924-6943 | MS.gene071778:CDS | 50.0% | |
| GTAGCAAGAGATGCAAAGCG+TGG | + | 51802:4725-4744 | MS.gene071778:CDS | 50.0% | |
| GTCAGCATTTAGTGGGGAAC+AGG | - | 51802:6969-6988 | MS.gene071778:intergenic | 50.0% | |
| GTCTCCCATGGATACAGTCT+TGG | + | 51802:6245-6264 | MS.gene071778:CDS | 50.0% | |
| GTGAATCAGCCTCAACCCTA+AGG | - | 51802:4838-4857 | MS.gene071778:intergenic | 50.0% | |
| GTGACAAAAACAGCAGGTGG+AGG | - | 51802:6009-6028 | MS.gene071778:intergenic | 50.0% | |
| GTTCGGACACAAGCAGAGAA+GGG | - | 51802:7543-7562 | MS.gene071778:intergenic | 50.0% | |
| GTTCTTTAGTACCTGCGCCA+AGG | + | 51802:4882-4901 | MS.gene071778:CDS | 50.0% | |
| TACCTTGTGGCCTGATGCAA+CGG | - | 51802:5580-5599 | MS.gene071778:intergenic | 50.0% | |
| TCAGAACTCGCAACGTCTGT+GGG | + | 51802:6874-6893 | MS.gene071778:intron | 50.0% | |
| TCTCCATACCGTCCATTGTG+AGG | - | 51802:6353-6372 | MS.gene071778:intergenic | 50.0% | |
| TTTCCTGAGGAGACCATCGT+TGG | + | 51802:8357-8376 | MS.gene071778:CDS | 50.0% | |
| ! | GCCATATCTTTTAACGGCCG+AGG | + | 51802:5813-5832 | MS.gene071778:CDS | 50.0% |
| ! | TGCTTTCATCCTTTTCCCGG+GGG | + | 51802:8163-8182 | MS.gene071778:CDS | 50.0% |
| !! | ACTTCAGAAGGTACCTGCAG+AGG | - | 51802:7021-7040 | MS.gene071778:intergenic | 50.0% |
| !! | ATGATGGGTCAAAGCCAAGC+TGG | + | 51802:6564-6583 | MS.gene071778:CDS | 50.0% |
| !! | CTGTGTTGACTTCCTTCAGC+CGG | - | 51802:6390-6409 | MS.gene071778:intergenic | 50.0% |
| ACCCGTGTGAGGTAGCATTG+AGG | - | 51802:6595-6614 | MS.gene071778:intergenic | 55.0% | |
| ATGGTGCTCACCCGGTGAAT+GGG | + | 51802:8319-8338 | MS.gene071778:CDS | 55.0% | |
| CAGCATGCTAGTCATGACGC+TGG | + | 51802:6138-6157 | MS.gene071778:CDS | 55.0% | |
| CATGACGTCGACCATAGGCA+AGG | - | 51802:7870-7889 | MS.gene071778:intergenic | 55.0% | |
| CATGGGGTTCATCCAGAGGA+TGG | + | 51802:6474-6493 | MS.gene071778:CDS | 55.0% | |
| CCCCTCAATGCTACCTCACA+CGG | + | 51802:6590-6609 | MS.gene071778:CDS | 55.0% | |
| CCCTCAATGCTACCTCACAC+GGG | + | 51802:6591-6610 | MS.gene071778:CDS | 55.0% | |
| CTTCACGGTACAAGGCAGCT+CGG | - | 51802:6915-6934 | MS.gene071778:intergenic | 55.0% | |
| CTTGCCTATGGTCGACGTCA+TGG | + | 51802:7868-7887 | MS.gene071778:CDS | 55.0% | |
| CTTGGTCCAGTCCCATTCAC+CGG | - | 51802:8333-8352 | MS.gene071778:intergenic | 55.0% | |
| GATGAAACCAGACCGGCTGA+AGG | + | 51802:6375-6394 | MS.gene071778:CDS | 55.0% | |
| GCAATAGTAGACCTTGGCGC+AGG | - | 51802:4896-4915 | MS.gene071778:intergenic | 55.0% | |
| GCCGCTGCAATAGTAGACCT+TGG | - | 51802:4902-4921 | MS.gene071778:intergenic | 55.0% | |
| GCCTTACGTTGCCTCCTCAA+GGG | - | 51802:7306-7325 | MS.gene071778:intergenic | 55.0% | |
| GGACGTTGCCTCTGTCATTG+AGG | - | 51802:5968-5987 | MS.gene071778:intergenic | 55.0% | |
| GGTGAGCACCATCATAGTGG+AGG | - | 51802:8311-8330 | MS.gene071778:intergenic | 55.0% | |
| GGTTCGGACACAAGCAGAGA+AGG | - | 51802:7544-7563 | MS.gene071778:intergenic | 55.0% | |
| GTCAGAACTCGCAACGTCTG+TGG | + | 51802:6873-6892 | MS.gene071778:intron | 55.0% | |
| GTCCGCTTGAAACTGAGCCA+CGG | - | 51802:6193-6212 | MS.gene071778:intergenic | 55.0% | |
| TCCCTTGAGGAGGCAACGTA+AGG | + | 51802:7302-7321 | MS.gene071778:intron | 55.0% | |
| TGCCGTGGCTCAGTTTCAAG+CGG | + | 51802:6188-6207 | MS.gene071778:CDS | 55.0% | |
| TGCCTTACGTTGCCTCCTCA+AGG | - | 51802:7307-7326 | MS.gene071778:intergenic | 55.0% | |
| TGCTACCTCACACGGGTGTT+AGG | + | 51802:6598-6617 | MS.gene071778:CDS | 55.0% | |
| TGGCCATATGAGGACGCCTT+GGG | + | 51802:5103-5122 | MS.gene071778:CDS | 55.0% | |
| TTGACTTCCTTCAGCCGGTC+TGG | - | 51802:6385-6404 | MS.gene071778:intergenic | 55.0% | |
| TTGGCCATATGAGGACGCCT+TGG | + | 51802:5102-5121 | MS.gene071778:CDS | 55.0% | |
| TTGGTCCAGTCCCATTCACC+GGG | - | 51802:8332-8351 | MS.gene071778:intergenic | 55.0% | |
| ! | CAACAGAATACGGAGGCACG+AGG | - | 51802:6098-6117 | MS.gene071778:intergenic | 55.0% |
| ! | CAGACGTTGCGAGTTCTGAC+TGG | - | 51802:6873-6892 | MS.gene071778:intergenic | 55.0% |
| ! | CCACTATGATGGTGCTCACC+CGG | + | 51802:8311-8330 | MS.gene071778:CDS | 55.0% |
| ! | CCCGTGTGAGGTAGCATTGA+GGG | - | 51802:6594-6613 | MS.gene071778:intergenic | 55.0% |
| ! | CCGTGTGAGGTAGCATTGAG+GGG | - | 51802:6593-6612 | MS.gene071778:intergenic | 55.0% |
| ! | GGGTTGAGGCTGATTCACTG+CGG | + | 51802:4840-4859 | MS.gene071778:intron | 55.0% |
| ! | TACGGAGGCACGAGGAAGAA+AGG | - | 51802:6090-6109 | MS.gene071778:intergenic | 55.0% |
| ! | TTTCATCCTTTTCCCGGGGG+CGG | + | 51802:8166-8185 | MS.gene071778:CDS | 55.0% |
| !! | CAGAAGGTACCTGCAGAGGA+CGG | - | 51802:7017-7036 | MS.gene071778:intergenic | 55.0% |
| !! | GCATCCGAGTGCTGAAGATG+AGG | + | 51802:8129-8148 | MS.gene071778:CDS | 55.0% |
| !! | GCTAGTCATGACGCTGGTTC+AGG | + | 51802:6144-6163 | MS.gene071778:CDS | 55.0% |
| !! | GGTGCCCACTTTTCACCATG+CGG | + | 51802:7125-7144 | MS.gene071778:CDS | 55.0% |
| !! | TGGCATCGGCAACCTCACAA+TGG | + | 51802:6338-6357 | MS.gene071778:CDS | 55.0% |
| !! | TTGGGTTGGTGCTTGCGTCT+CGG | + | 51802:7427-7446 | MS.gene071778:CDS | 55.0% |
| CACGACCTAACACCCGTGTG+AGG | - | 51802:6606-6625 | MS.gene071778:intergenic | 60.0% | |
| CCATATGAGGACGCCTTGGG+TGG | + | 51802:5106-5125 | MS.gene071778:CDS | 60.0% | |
| CCGGGTGAGCACCATCATAG+TGG | - | 51802:8314-8333 | MS.gene071778:intergenic | 60.0% | |
| GATGGTGCTCACCCGGTGAA+TGG | + | 51802:8318-8337 | MS.gene071778:CDS | 60.0% | |
| GCAGCGGCGTTTAGTCCAGA+TGG | + | 51802:4914-4933 | MS.gene071778:CDS | 60.0% | |
| GCATTGAGGGGAGACCAGCT+TGG | - | 51802:6581-6600 | MS.gene071778:intergenic | 60.0% | |
| TACCTCATGCCGTCCTCTGC+AGG | + | 51802:7005-7024 | MS.gene071778:CDS | 60.0% | |
| TACCTGCAGAGGACGGCATG+AGG | - | 51802:7010-7029 | MS.gene071778:intergenic | 60.0% | |
| TCCATAAACTAGCCCGCCCC+CGG | - | 51802:8182-8201 | MS.gene071778:intergenic | 60.0% | |
| TGCCGTTGCATCAGGCCACA+AGG | + | 51802:5575-5594 | MS.gene071778:CDS | 60.0% | |
| ! | CCACCCAAGGCGTCCTCATA+TGG | - | 51802:5109-5128 | MS.gene071778:intergenic | 60.0% |
| ! | TTCATCCTTTTCCCGGGGGC+GGG | + | 51802:8167-8186 | MS.gene071778:CDS | 60.0% |
| !! | TGGGTTGGTGCTTGCGTCTC+GGG | + | 51802:7428-7447 | MS.gene071778:CDS | 60.0% |
| CCATAAACTAGCCCGCCCCC+GGG | - | 51802:8181-8200 | MS.gene071778:intergenic | 65.0% | |
| GCTCACCCGGTGAATGGGAC+TGG | + | 51802:8324-8343 | MS.gene071778:CDS | 65.0% | |
| ! | GCAACGTCTGTGGGCTGCAG+CGG | + | 51802:6883-6902 | MS.gene071778:intron | 65.0% |
| ACTAGCCCGCCCCCGGGAAA+AGG | - | 51802:8175-8194 | MS.gene071778:intergenic | 70.0% | |
| !! | CCCGGGGGCGGGCTAGTTTA+TGG | + | 51802:8178-8197 | MS.gene071778:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 51802 | gene | 4673 | 8380 | 4673 | ID=MS.gene071778 |
| 51802 | mRNA | 4673 | 8380 | 4673 | ID=MS.gene071778.t1;Parent=MS.gene071778 |
| 51802 | exon | 4673 | 4759 | 4673 | ID=MS.gene071778.t1.exon1;Parent=MS.gene071778.t1 |
| 51802 | CDS | 4673 | 4759 | 4673 | ID=cds.MS.gene071778.t1;Parent=MS.gene071778.t1 |
| 51802 | exon | 4841 | 4957 | 4841 | ID=MS.gene071778.t1.exon2;Parent=MS.gene071778.t1 |
| 51802 | CDS | 4841 | 4957 | 4841 | ID=cds.MS.gene071778.t1;Parent=MS.gene071778.t1 |
| 51802 | exon | 5043 | 5127 | 5043 | ID=MS.gene071778.t1.exon3;Parent=MS.gene071778.t1 |
| 51802 | CDS | 5043 | 5127 | 5043 | ID=cds.MS.gene071778.t1;Parent=MS.gene071778.t1 |
| 51802 | exon | 5289 | 5397 | 5289 | ID=MS.gene071778.t1.exon4;Parent=MS.gene071778.t1 |
| 51802 | CDS | 5289 | 5397 | 5289 | ID=cds.MS.gene071778.t1;Parent=MS.gene071778.t1 |
| 51802 | exon | 5529 | 5596 | 5529 | ID=MS.gene071778.t1.exon5;Parent=MS.gene071778.t1 |
| 51802 | CDS | 5529 | 5596 | 5529 | ID=cds.MS.gene071778.t1;Parent=MS.gene071778.t1 |
| 51802 | exon | 5769 | 5834 | 5769 | ID=MS.gene071778.t1.exon6;Parent=MS.gene071778.t1 |
| 51802 | CDS | 5769 | 5834 | 5769 | ID=cds.MS.gene071778.t1;Parent=MS.gene071778.t1 |
| 51802 | exon | 5940 | 6619 | 5940 | ID=MS.gene071778.t1.exon7;Parent=MS.gene071778.t1 |
| 51802 | CDS | 5940 | 6619 | 5940 | ID=cds.MS.gene071778.t1;Parent=MS.gene071778.t1 |
| 51802 | exon | 6654 | 6862 | 6654 | ID=MS.gene071778.t1.exon8;Parent=MS.gene071778.t1 |
| 51802 | CDS | 6654 | 6862 | 6654 | ID=cds.MS.gene071778.t1;Parent=MS.gene071778.t1 |
| 51802 | exon | 6903 | 7026 | 6903 | ID=MS.gene071778.t1.exon9;Parent=MS.gene071778.t1 |
| 51802 | CDS | 6903 | 7026 | 6903 | ID=cds.MS.gene071778.t1;Parent=MS.gene071778.t1 |
| 51802 | exon | 7118 | 7318 | 7118 | ID=MS.gene071778.t1.exon10;Parent=MS.gene071778.t1 |
| 51802 | CDS | 7118 | 7318 | 7118 | ID=cds.MS.gene071778.t1;Parent=MS.gene071778.t1 |
| 51802 | exon | 7425 | 7485 | 7425 | ID=MS.gene071778.t1.exon11;Parent=MS.gene071778.t1 |
| 51802 | CDS | 7425 | 7485 | 7425 | ID=cds.MS.gene071778.t1;Parent=MS.gene071778.t1 |
| 51802 | exon | 7841 | 7978 | 7841 | ID=MS.gene071778.t1.exon12;Parent=MS.gene071778.t1 |
| 51802 | CDS | 7841 | 7978 | 7841 | ID=cds.MS.gene071778.t1;Parent=MS.gene071778.t1 |
| 51802 | exon | 8094 | 8207 | 8094 | ID=MS.gene071778.t1.exon13;Parent=MS.gene071778.t1 |
| 51802 | CDS | 8094 | 8207 | 8094 | ID=cds.MS.gene071778.t1;Parent=MS.gene071778.t1 |
| 51802 | exon | 8291 | 8380 | 8291 | ID=MS.gene071778.t1.exon14;Parent=MS.gene071778.t1 |
| 51802 | CDS | 8291 | 8380 | 8291 | ID=cds.MS.gene071778.t1;Parent=MS.gene071778.t1 |
| Gene Sequence |
| Protein sequence |
