AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene07187

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07187.t1 MTR_1g088885 97.585 621 15 0 1 621 1 621 0.0 1249
MS.gene07187.t1 MTR_7g108290 78.904 602 117 7 1 595 1 599 0.0 971
MS.gene07187.t1 MTR_4g022330 47.727 572 273 9 30 591 28 583 5.67e-180 523
MS.gene07187.t1 MTR_7g073980 45.068 588 290 8 34 609 31 597 8.52e-169 496
MS.gene07187.t1 MTR_5g016060 41.204 648 309 17 13 621 16 630 6.33e-155 460
MS.gene07187.t1 MTR_4g095430 38.462 624 328 15 25 621 1 595 6.43e-135 407
MS.gene07187.t1 MTR_3g062540 36.174 622 317 15 20 621 7 568 5.12e-123 375
MS.gene07187.t1 MTR_5g016060 39.344 549 262 16 111 621 1 516 1.49e-116 357
MS.gene07187.t1 MTR_3g062540 36.239 585 294 14 56 621 2 526 9.69e-115 353
MS.gene07187.t1 MTR_4g093850 33.333 651 355 14 31 621 38 669 3.05e-113 353
MS.gene07187.t1 MTR_5g075640 34.223 637 319 15 20 621 8 579 5.72e-112 347
MS.gene07187.t1 MTR_2g009340 32.512 649 361 14 14 600 21 654 7.87e-109 342
MS.gene07187.t1 MTR_8g078900 33.498 606 311 9 38 572 22 606 3.10e-107 338
MS.gene07187.t1 MTR_8g078900 33.613 595 303 9 49 572 3 576 1.76e-105 332
MS.gene07187.t1 MTR_5g075640 34.333 600 295 14 56 621 2 536 4.49e-104 325
MS.gene07187.t1 MTR_8g090220 33.904 584 286 13 36 572 52 582 3.41e-103 327
MS.gene07187.t1 MTR_2g084595 33.953 592 332 12 34 587 21 591 1.11e-102 325
MS.gene07187.t1 MTR_8g078900 34.799 546 284 8 78 572 42 566 3.72e-101 321
MS.gene07187.t1 MTR_1g094850 35.315 572 324 12 38 587 28 575 5.46e-101 320
MS.gene07187.t1 MTR_1g064360 35.027 551 307 11 26 553 15 537 5.52e-101 318
MS.gene07187.t1 MTR_8g090220 36.162 495 247 10 36 495 52 512 5.33e-100 314
MS.gene07187.t1 MTR_2g018750 34.942 601 336 16 14 587 3 575 4.98e-99 315
MS.gene07187.t1 MTR_5g015790 37.029 478 265 9 34 494 25 483 3.79e-92 297
MS.gene07187.t1 MTR_1g106430 35.327 535 309 11 34 542 26 549 5.39e-92 297
MS.gene07187.t1 MTR_5g032780 37.311 528 275 14 18 503 12 525 1.25e-89 291
MS.gene07187.t1 MTR_1g014070 35.095 473 284 7 34 493 25 487 8.43e-87 283
MS.gene07187.t1 MTR_2g048390 35.920 451 245 9 26 444 15 453 1.11e-83 270
MS.gene07187.t1 MTR_4g093850 33.747 483 252 10 26 454 33 501 9.77e-82 267
MS.gene07187.t1 MTR_8g069330 36.401 489 260 11 39 503 29 490 1.06e-79 263
MS.gene07187.t1 MTR_4g134210 31.551 561 315 13 27 563 17 532 6.77e-77 256
MS.gene07187.t1 MTR_8g078900 32.819 454 247 7 38 444 22 464 1.51e-75 249
MS.gene07187.t1 MTR_8g078900 34.518 394 220 6 78 444 42 424 1.29e-69 232
MS.gene07187.t1 MTR_2g084595 33.107 441 250 8 34 444 21 446 2.30e-68 229
MS.gene07187.t1 MTR_1g082690 28.958 480 284 10 37 505 59 492 7.74e-67 228
MS.gene07187.t1 MTR_2g027410 30.309 485 281 10 27 492 17 463 1.15e-64 223
MS.gene07187.t1 MTR_4g011530 33.995 403 218 12 201 588 33 402 9.45e-63 214
MS.gene07187.t1 MTR_2g102730 34.133 375 196 9 210 572 24 359 2.13e-58 202
MS.gene07187.t1 MTR_2g027410 30.070 429 243 10 83 492 1 391 4.06e-54 192
MS.gene07187.t1 MTR_4g045767 26.289 582 354 14 39 590 7 543 6.34e-48 176
MS.gene07187.t1 MTR_4g074190 27.525 505 279 14 37 495 4 467 1.13e-42 162
MS.gene07187.t1 MTR_1g035720 25.168 596 315 20 39 577 6 527 1.70e-41 158
MS.gene07187.t1 MTR_1g105870 41.579 190 102 4 43 229 38 221 6.00e-41 150
MS.gene07187.t1 MTR_4g074190 27.391 460 251 12 78 495 3 421 4.81e-40 153
MS.gene07187.t1 MTR_4g074190 26.374 455 248 14 37 445 4 417 3.54e-32 130
MS.gene07187.t1 MTR_2g010890 25.986 431 264 8 102 515 1 393 1.91e-30 124
MS.gene07187.t1 MTR_2g048375 46.491 114 51 3 460 572 1 105 3.87e-22 94.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07187.t1 AT1G03010 69.062 640 173 7 1 621 1 634 0.0 876
MS.gene07187.t1 AT1G03010 69.294 609 162 7 32 621 5 607 0.0 830
MS.gene07187.t1 AT1G03010 69.294 609 162 7 32 621 31 633 0.0 829
MS.gene07187.t1 AT2G47860 59.690 645 226 10 1 621 1 635 0.0 748
MS.gene07187.t1 AT2G47860 57.635 668 226 11 1 621 1 658 0.0 736
MS.gene07187.t1 AT2G47860 58.779 524 186 8 121 621 1 517 0.0 582
MS.gene07187.t1 AT2G47860 58.779 524 186 8 121 621 1 517 0.0 582
MS.gene07187.t1 AT2G47860 60.352 454 160 6 1 444 1 444 0.0 543
MS.gene07187.t1 AT2G47860 57.442 477 160 7 1 444 1 467 0.0 531
MS.gene07187.t1 AT5G48800 45.391 575 286 7 23 591 28 580 2.20e-173 506
MS.gene07187.t1 AT3G08570 43.783 571 288 9 34 591 32 582 1.67e-152 453
MS.gene07187.t1 AT3G08660 42.781 561 273 13 34 589 32 549 3.65e-143 428
MS.gene07187.t1 AT5G67385 39.055 635 330 12 13 621 1 604 5.84e-142 426
MS.gene07187.t1 AT3G08660 42.293 532 259 13 63 589 1 489 5.57e-131 395
MS.gene07187.t1 AT5G67385 38.644 590 306 11 57 621 1 559 1.60e-127 387
MS.gene07187.t1 AT5G67385 38.644 590 306 11 57 621 1 559 1.60e-127 387
MS.gene07187.t1 AT5G67385 38.644 590 306 11 57 621 1 559 1.60e-127 387
MS.gene07187.t1 AT5G67385 38.644 590 306 11 57 621 1 559 1.60e-127 387
MS.gene07187.t1 AT1G30440 35.987 628 320 13 26 608 15 605 1.17e-118 367
MS.gene07187.t1 AT2G30520 34.928 627 333 15 22 621 15 593 6.79e-114 353
MS.gene07187.t1 AT5G03250 35.522 594 318 15 26 588 15 574 2.52e-109 341
MS.gene07187.t1 AT2G30520 34.628 592 313 14 56 621 2 545 9.41e-104 325
MS.gene07187.t1 AT2G30520 34.628 592 313 14 56 621 2 545 9.41e-104 325
MS.gene07187.t1 AT5G13600 37.790 561 283 16 39 572 29 550 1.92e-103 326
MS.gene07187.t1 AT3G49970 33.946 598 281 15 49 621 7 515 1.08e-99 313
MS.gene07187.t1 AT3G49970 33.946 598 281 15 49 621 7 515 1.08e-99 313
MS.gene07187.t1 AT2G14820 33.886 543 321 12 34 555 25 550 7.92e-96 307
MS.gene07187.t1 AT2G14820 33.886 543 321 12 34 555 25 550 7.92e-96 307
MS.gene07187.t1 AT3G44820 31.833 600 328 12 26 572 12 583 4.08e-95 306
MS.gene07187.t1 AT5G66560 32.909 629 299 12 38 572 21 620 6.43e-95 306
MS.gene07187.t1 AT3G08660 40.284 422 216 10 34 450 32 422 2.37e-94 297
MS.gene07187.t1 AT3G50840 33.100 571 311 9 22 572 2 521 4.68e-93 298
MS.gene07187.t1 AT5G66560 32.848 618 292 12 49 572 3 591 1.49e-92 299
MS.gene07187.t1 AT5G10250 32.470 579 294 16 31 569 44 565 1.74e-91 295
MS.gene07187.t1 AT5G66560 34.679 545 277 9 78 572 66 581 4.16e-91 295
MS.gene07187.t1 AT5G10250 32.399 571 290 16 31 569 44 550 1.76e-88 287
MS.gene07187.t1 AT4G31820 35.491 479 266 9 29 494 20 468 1.14e-87 284
MS.gene07187.t1 AT1G67900 35.968 506 281 7 34 505 24 520 2.02e-87 285
MS.gene07187.t1 AT1G67900 35.968 506 281 7 34 505 24 520 2.02e-87 285
MS.gene07187.t1 AT1G67900 35.968 506 281 7 34 505 24 520 2.02e-87 285
MS.gene07187.t1 AT1G67900 35.968 506 281 7 34 505 24 520 2.02e-87 285
MS.gene07187.t1 AT1G67900 35.968 506 281 7 34 505 24 520 2.02e-87 285
MS.gene07187.t1 AT1G67900 35.968 506 281 7 34 505 24 520 2.02e-87 285
MS.gene07187.t1 AT3G50840 32.836 536 289 9 57 572 1 485 1.61e-84 275
MS.gene07187.t1 AT3G50840 32.836 536 289 9 57 572 1 485 1.61e-84 275
MS.gene07187.t1 AT5G67440 35.639 477 266 11 34 494 25 476 2.36e-82 270
MS.gene07187.t1 AT5G67440 35.639 477 266 11 34 494 25 476 2.36e-82 270
MS.gene07187.t1 AT4G37590 34.151 489 258 13 34 501 25 470 2.45e-80 265
MS.gene07187.t1 AT5G67440 35.714 462 256 11 49 494 3 439 1.24e-78 259
MS.gene07187.t1 AT3G26490 34.556 518 279 12 19 494 8 507 2.61e-78 259
MS.gene07187.t1 AT3G26490 34.556 518 279 12 19 494 8 507 2.61e-78 259
MS.gene07187.t1 AT3G26490 34.556 518 279 12 19 494 8 507 2.61e-78 259
MS.gene07187.t1 AT5G03250 33.468 496 268 13 121 588 1 462 4.02e-78 256
MS.gene07187.t1 AT2G23050 33.401 491 262 11 24 501 19 457 4.05e-78 256
MS.gene07187.t1 AT4G31820 34.607 445 248 9 63 494 1 415 3.17e-74 247
MS.gene07187.t1 AT5G47800 32.041 490 299 8 33 509 23 491 3.42e-74 248
MS.gene07187.t1 AT5G47800 32.041 490 299 8 33 509 23 491 3.42e-74 248
MS.gene07187.t1 AT5G47800 32.041 490 299 8 33 509 23 491 3.42e-74 248
MS.gene07187.t1 AT5G47800 32.317 492 295 9 33 509 136 604 5.26e-73 248
MS.gene07187.t1 AT5G66560 32.225 481 231 10 38 444 21 480 2.10e-63 217
MS.gene07187.t1 AT1G52770 33.333 399 212 6 198 572 9 377 1.28e-60 209
MS.gene07187.t1 AT3G26490 32.558 473 259 12 19 449 8 462 7.87e-59 205
MS.gene07187.t1 AT5G64330 35.989 364 200 10 265 606 371 723 1.16e-55 201
MS.gene07187.t1 AT5G64330 34.137 249 128 2 34 251 50 293 1.14e-43 167
MS.gene07187.t1 AT3G19850 27.195 467 277 6 60 493 28 464 3.77e-53 191
MS.gene07187.t1 AT2G23050 32.134 389 208 9 121 501 1 341 1.13e-52 185
MS.gene07187.t1 AT3G15570 35.216 301 148 5 216 495 35 309 1.78e-50 181
MS.gene07187.t1 AT5G64330 42.915 247 122 5 265 499 312 551 3.10e-50 184
MS.gene07187.t1 AT5G64330 32.479 234 122 2 49 251 6 234 1.20e-37 148
MS.gene07187.t1 AT5G64330 42.915 247 122 5 265 499 371 610 4.85e-50 184
MS.gene07187.t1 AT5G64330 34.137 249 128 2 34 251 50 293 6.43e-44 167
MS.gene07187.t1 AT5G48130 28.033 478 292 10 34 499 37 474 1.69e-49 182
MS.gene07187.t1 AT1G50280 27.572 486 295 11 32 488 3 460 2.27e-46 172
MS.gene07187.t1 AT1G50280 27.790 439 268 9 74 488 14 427 2.42e-44 165
MS.gene07187.t1 AT3G22104 27.983 461 271 10 36 479 4 420 1.58e-41 157
MS.gene07187.t1 AT3G03510 27.053 414 239 10 90 497 8 364 2.23e-36 142
MS.gene07187.t1 AT5G17580 25.738 474 307 10 38 499 22 462 2.68e-34 138
MS.gene07187.t1 AT5G17580 25.738 474 307 10 38 499 7 447 2.79e-34 137
MS.gene07187.t1 AT3G22104 27.390 387 223 7 107 479 3 345 2.28e-30 124
MS.gene07187.t1 AT3G22104 27.390 387 223 7 107 479 3 345 2.28e-30 124
MS.gene07187.t1 AT3G22104 27.390 387 223 7 107 479 3 345 2.28e-30 124
MS.gene07187.t1 AT3G49900 35.294 153 88 5 30 176 58 205 1.76e-12 70.5
MS.gene07187.t1 AT3G49900 35.294 153 88 5 30 176 58 205 1.84e-12 70.5

Find 102 sgRNAs with CRISPR-Local

Find 224 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTGTCATTTCTAGAAAA+TGG 0.095087 1.4:-70582579 None:intergenic
CACCATTCTGAAGGTGTTTC+AGG 0.141106 1.4:-70582838 None:intergenic
GAATTTAAGCCTAGCATTTC+AGG 0.187693 1.4:+70580290 MS.gene07187:CDS
ATTAAGCTTACTTAATTTCT+TGG 0.230580 1.4:-70584225 None:intergenic
CGCTCTGACTCCTTTATGTT+TGG 0.234991 1.4:-70583810 None:intergenic
AAGATAATTGTCAAGCAATT+TGG 0.245136 1.4:-70583415 None:intergenic
AACTTTGATGGAAACAAGTT+TGG 0.246026 1.4:-70583456 None:intergenic
TACAGTTTCCTCTAGTTTCT+AGG 0.257189 1.4:+70582386 MS.gene07187:intron
TTTCTAGGAGTGGAAGAATT+AGG 0.260242 1.4:+70582401 MS.gene07187:CDS
TTAAGAATTGAGCTTTGTTT+TGG 0.278917 1.4:-70583387 None:intergenic
TACTTCTTGTAGATCTGATT+TGG 0.281526 1.4:+70583146 MS.gene07187:CDS
AGGCTAATCTCTTCTGAAAT+TGG 0.287496 1.4:-70582712 None:intergenic
GATATAAACTTGTTGGAATC+AGG 0.290397 1.4:-70583215 None:intergenic
ACCGAGTGACGCCTTCTCTT+TGG 0.292104 1.4:-70584311 None:intergenic
ATGCTTCTTGTGATAGTTTC+TGG 0.296635 1.4:-70583860 None:intergenic
TGCAAAGAGCAACTTACTTC+TGG 0.313546 1.4:+70582772 MS.gene07187:CDS
CTACTCTTTGGTGGACTAAA+TGG 0.318680 1.4:+70583993 MS.gene07187:CDS
GCAAGTGAAATGAACTTTGA+TGG 0.347009 1.4:-70583468 None:intergenic
GAGAATGAGACTCACTGATT+TGG 0.358445 1.4:+70584130 MS.gene07187:CDS
ATCAGTTGATATCTTCCTTA+AGG 0.362006 1.4:+70583539 MS.gene07187:CDS
TTCTGTCATTTCTAGAAAAT+GGG 0.365097 1.4:-70582578 None:intergenic
AGTGATCTTAGCATCGAAAT+AGG 0.383984 1.4:+70582099 MS.gene07187:CDS
CTTACAATTCGCGCATGATC+AGG 0.393723 1.4:-70583501 None:intergenic
GGTCAATTCCCTCAACGTTC+AGG 0.406687 1.4:+70584014 MS.gene07187:CDS
AAAACAAAGCTCAATTCTTA+AGG 0.416708 1.4:+70583389 MS.gene07187:CDS
TTTCAGTTTCATCTCTCATT+CGG 0.419572 1.4:-70583335 None:intergenic
TGAAGGTGTTTCAGGTTCAA+TGG 0.420856 1.4:-70582830 None:intergenic
TTAATCTTGATTTCTTCAAA+AGG 0.420944 1.4:+70582881 MS.gene07187:CDS
TCAGGCAGTGGTGCAGGAAG+TGG 0.423415 1.4:+70584032 MS.gene07187:CDS
CTAGCTGCAAAATTCTGTTA+TGG 0.424115 1.4:+70582505 MS.gene07187:CDS
GTAAGCTTAATGCATTGTTT+CGG 0.426324 1.4:+70584237 MS.gene07187:CDS
ACTTGTACTGCCATTTGAAC+TGG 0.430941 1.4:-70583912 None:intergenic
AATGCATTGTTTCGGATGAA+TGG 0.434128 1.4:+70584245 MS.gene07187:CDS
AAACTTGAGAGAAAAGCTAT+TGG 0.442825 1.4:-70583093 None:intergenic
GGACACAATCAACTACTCTT+TGG 0.443826 1.4:+70583981 MS.gene07187:CDS
TAAAGCGAATGGCGTTGGTT+CGG 0.445184 1.4:+70584271 MS.gene07187:CDS
AATGAGAGATGAAACTGAAA+TGG 0.445715 1.4:+70583338 MS.gene07187:CDS
CGTCTCTCTTAGATATGATT+CGG 0.453427 1.4:-70582632 None:intergenic
CGTTCATAGCGTTGCGAAGA+CGG 0.455336 1.4:-70583953 None:intergenic
TAATCTTGATTTCTTCAAAA+GGG 0.457630 1.4:+70582882 MS.gene07187:CDS
ACTTTGATGGAAACAAGTTT+GGG 0.459297 1.4:-70583455 None:intergenic
ATAGGTTCATCCAAACATAA+AGG 0.461835 1.4:+70583800 MS.gene07187:intron
TGAGAGACTACCAGTTCAAA+TGG 0.462996 1.4:+70583902 MS.gene07187:CDS
TGACGCCTTCTCTTTGGAAA+AGG 0.465210 1.4:-70584305 None:intergenic
TTCGTCCAAGCTCAAGCATA+AGG 0.469711 1.4:+70580324 MS.gene07187:CDS
CAACGTTCAGGCAGTGGTGC+AGG 0.480962 1.4:+70584026 MS.gene07187:CDS
TCACTAGAGACATCAGATAT+CGG 0.481120 1.4:-70582081 None:intergenic
TCTGATTTGGAGAGAAGGAT+TGG 0.486879 1.4:+70583159 MS.gene07187:CDS
TTCCCTCAACGTTCAGGCAG+TGG 0.490228 1.4:+70584020 MS.gene07187:CDS
TTATCTGCAATGAAATCAAA+GGG 0.493791 1.4:+70582907 MS.gene07187:CDS
CACCACTGCCTGAACGTTGA+GGG 0.499411 1.4:-70584022 None:intergenic
AGAAATGACAGAAGAATTCG+CGG 0.503937 1.4:+70582588 MS.gene07187:CDS
TTTATCTGCAATGAAATCAA+AGG 0.504554 1.4:+70582906 MS.gene07187:CDS
GCATCTTAGCATAGCAACAT+TGG 0.504960 1.4:-70582551 None:intergenic
AATTTAAGCCTAGCATTTCA+GGG 0.512965 1.4:+70580291 MS.gene07187:CDS
GGTATTAAAGCGAATGGCGT+TGG 0.513433 1.4:+70584266 MS.gene07187:CDS
CATTGATTAATCTGTTAACA+AGG 0.513704 1.4:-70582732 None:intergenic
ACTGATGCATAGTTATCTCT+TGG 0.515042 1.4:-70584065 None:intergenic
GCATGCCTTATGCTTGAGCT+TGG 0.516333 1.4:-70580329 None:intergenic
AACTCAATCAAGGAAAAGTC+AGG 0.517070 1.4:+70583068 MS.gene07187:CDS
GATTTGAAGAGCTTATTAGC+AGG 0.520820 1.4:-70584197 None:intergenic
GTTTACTACCAACTCAATCA+AGG 0.523450 1.4:+70583058 MS.gene07187:CDS
TCCACACCACCTGGTACACT+AGG 0.525740 1.4:-70582472 None:intergenic
ATAAGTTTCCCTAGTGTACC+AGG 0.527998 1.4:+70582463 MS.gene07187:CDS
ATGGCGTTGGTTCGGAGAGT+CGG 0.532835 1.4:+70584279 MS.gene07187:CDS
CCCTAGTGTACCAGGTGGTG+TGG 0.534693 1.4:+70582471 MS.gene07187:CDS
TCCAAAGAGAAGGCGTCACT+CGG 0.536171 1.4:+70584310 MS.gene07187:CDS
TTACTTCAAGTTTCAGCTCA+CGG 0.537910 1.4:-70584100 None:intergenic
TAACTTGGATGAGGAGGATG+AGG 0.538954 1.4:+70583305 MS.gene07187:CDS
GGATGTCTTCAAGAATTGCT+TGG 0.540120 1.4:-70583194 None:intergenic
TAAAGGAGTCAGAGCGATAC+CGG 0.540199 1.4:+70583817 MS.gene07187:CDS
GCATAAGGCATGCCACTGAA+TGG 0.541197 1.4:+70580339 MS.gene07187:CDS
GTAGATCTGATTTGGAGAGA+AGG 0.543336 1.4:+70583154 MS.gene07187:CDS
TTCATGCTTTGCACTTCACA+AGG 0.544906 1.4:+70582125 MS.gene07187:CDS
TGAAACACCTTCAGAATGGT+GGG 0.545838 1.4:+70582840 MS.gene07187:CDS
CACAATCAACTACTCTTTGG+TGG 0.547927 1.4:+70583984 MS.gene07187:CDS
CTCTTCTTCCCTGAAATGCT+AGG 0.548210 1.4:-70580299 None:intergenic
TCAAATGCCTCCACACCACC+TGG 0.560746 1.4:-70582481 None:intergenic
CGTCTTCGCAACGCTATGAA+CGG 0.564447 1.4:+70583954 MS.gene07187:CDS
TTTCCTCTAGTTTCTAGGAG+TGG 0.568812 1.4:+70582391 MS.gene07187:CDS
CTGAAACACCTTCAGAATGG+TGG 0.572260 1.4:+70582839 MS.gene07187:CDS
TAGTGTACCAGGTGGTGTGG+AGG 0.580110 1.4:+70582474 MS.gene07187:CDS
AACCTGAAACACCTTCAGAA+TGG 0.581115 1.4:+70582836 MS.gene07187:CDS
ATGAATGGTATTAAAGCGAA+TGG 0.583404 1.4:+70584260 MS.gene07187:CDS
TAATCTCTTCTGAAATTGGT+AGG 0.585593 1.4:-70582708 None:intergenic
CATGCGCGAATTGTAAGCGA+TGG 0.589747 1.4:+70583507 MS.gene07187:CDS
AATTCTCTTCAAGTAGTCAA+AGG 0.596034 1.4:+70582976 MS.gene07187:CDS
TATCATAGATAGTACTGTTG+TGG 0.598221 1.4:-70583248 None:intergenic
GCACCACTGCCTGAACGTTG+AGG 0.599275 1.4:-70584023 None:intergenic
CGCAACGCTATGAACGGAGG+AGG 0.602346 1.4:+70583960 MS.gene07187:CDS
CTTCCACTCCTAGAAACTAG+AGG 0.616740 1.4:-70582394 None:intergenic
AACAGAATATTACCATTCAG+TGG 0.623909 1.4:-70580351 None:intergenic
AGTTTCACAACGGTGAAGAA+CGG 0.627577 1.4:-70582683 None:intergenic
AACTAGTTATTGTTTCAACA+AGG 0.630313 1.4:-70583038 None:intergenic
CCACACCACCTGGTACACTA+GGG 0.639625 1.4:-70582471 None:intergenic
CGAATCATATCTAAGAGAGA+CGG 0.658638 1.4:+70582633 MS.gene07187:CDS
GAAACACCTTCAGAATGGTG+GGG 0.659150 1.4:+70582841 MS.gene07187:CDS
ATGATACAGACTCAATTGTG+AGG 0.686110 1.4:+70583265 MS.gene07187:CDS
GAAATGGGAGTTGTCACTGT+AGG 0.693523 1.4:+70580266 None:intergenic
CTTCGCAACGCTATGAACGG+AGG 0.693671 1.4:+70583957 MS.gene07187:CDS
TTGGTAGGAGAGTTTCACAA+CGG 0.732412 1.4:-70582693 None:intergenic
AGTTTCCCTAGTGTACCAGG+TGG 0.760455 1.4:+70582466 MS.gene07187:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCATAATTTTATCATTA+AGG - chr1.4:70582289-70582308 None:intergenic 10.0%
!! AAATTCTGTATTTATTGAAT+TGG + chr1.4:70581782-70581801 MS.gene07187:intron 15.0%
!! AATTCTGTATTTATTGAATT+GGG + chr1.4:70581783-70581802 MS.gene07187:intron 15.0%
!! CTTAAAGTTTATATTATAGT+GGG - chr1.4:70580603-70580622 None:intergenic 15.0%
!! TATTGTAGAATATGTTATTA+TGG - chr1.4:70581535-70581554 None:intergenic 15.0%
!! TCTTAAAGTTTATATTATAG+TGG - chr1.4:70580604-70580623 None:intergenic 15.0%
!!! TTATTTTGATATAAACTTGT+TGG - chr1.4:70583225-70583244 None:intergenic 15.0%
!! AATAAATACAGAATTTGAGT+GGG - chr1.4:70581778-70581797 None:intergenic 20.0%
!! ATGCAATAACATTTAAAGAA+AGG - chr1.4:70582166-70582185 None:intergenic 20.0%
!! ATTAAGCTTACTTAATTTCT+TGG - chr1.4:70584228-70584247 None:intergenic 20.0%
!! CATCAATGATTTAGATTAAT+GGG + chr1.4:70581488-70581507 MS.gene07187:intron 20.0%
!! CATGTATGTTTATTATCTTT+AGG + chr1.4:70581316-70581335 MS.gene07187:intron 20.0%
!! GGACTTAATGAATAAAAATT+AGG + chr1.4:70580544-70580563 MS.gene07187:intron 20.0%
!! TAAAATTCACTGATAAGAAA+GGG - chr1.4:70581466-70581485 None:intergenic 20.0%
!! TAATCTTGATTTCTTCAAAA+GGG + chr1.4:70582882-70582901 MS.gene07187:CDS 20.0%
!! TATATGCAATTTAATGTACA+AGG - chr1.4:70581892-70581911 None:intergenic 20.0%
!! TATTGTCATATTGATGTTTA+AGG - chr1.4:70581422-70581441 None:intergenic 20.0%
!! TCATCAATGATTTAGATTAA+TGG + chr1.4:70581487-70581506 MS.gene07187:intron 20.0%
!! TTAAATGTTATTGCATATTC+AGG + chr1.4:70582170-70582189 MS.gene07187:intron 20.0%
!! TTAATCTTGATTTCTTCAAA+AGG + chr1.4:70582881-70582900 MS.gene07187:CDS 20.0%
!!! AGAATTTTTGAAGAAACAAA+GGG + chr1.4:70583014-70583033 MS.gene07187:CDS 20.0%
!!! ATAGGGAAATGTTTTTTTAT+AGG - chr1.4:70581714-70581733 None:intergenic 20.0%
!!! CTGTTTTTACTATTCAATTT+TGG + chr1.4:70580382-70580401 MS.gene07187:intron 20.0%
!!! CTTAGACACTATATTTTATA+GGG - chr1.4:70581731-70581750 None:intergenic 20.0%
!!! CTTCATGTTTTCTTAAAAAA+TGG + chr1.4:70582314-70582333 MS.gene07187:intron 20.0%
!!! CTTTGAAAAATAAAACTCTT+AGG + chr1.4:70582208-70582227 MS.gene07187:intron 20.0%
!!! TAGAATTTTTGAAGAAACAA+AGG + chr1.4:70583013-70583032 MS.gene07187:CDS 20.0%
!!! TAGGGAAATGTTTTTTTATA+GGG - chr1.4:70581713-70581732 None:intergenic 20.0%
!!! TTTGGTTTTATTTGAATGTT+TGG + chr1.4:70580400-70580419 MS.gene07187:intron 20.0%
!!! TTTTTCCATTTTTCTTAACT+TGG + chr1.4:70583290-70583309 MS.gene07187:CDS 20.0%
! AAAACAAAGCTCAATTCTTA+AGG + chr1.4:70583389-70583408 MS.gene07187:CDS 25.0%
! AACTAGTTATTGTTTCAACA+AGG - chr1.4:70583041-70583060 None:intergenic 25.0%
! AAGATAATTGTCAAGCAATT+TGG - chr1.4:70583418-70583437 None:intergenic 25.0%
! AATTGCAGACAAATGTTAAT+TGG - chr1.4:70581293-70581312 None:intergenic 25.0%
! AATTGGATTCAAATTCTCTA+AGG + chr1.4:70580691-70580710 MS.gene07187:intron 25.0%
! ACTCTTAGGTACTATATAAA+TGG + chr1.4:70582222-70582241 MS.gene07187:intron 25.0%
! CAATAAATACAGAATTTGAG+TGG - chr1.4:70581779-70581798 None:intergenic 25.0%
! CCTATAAAATATAGTGTCTA+AGG + chr1.4:70581729-70581748 MS.gene07187:intron 25.0%
! GTAAAATTCACTGATAAGAA+AGG - chr1.4:70581467-70581486 None:intergenic 25.0%
! TACCAGTTTCAATGTTTAAA+CGG - chr1.4:70581149-70581168 None:intergenic 25.0%
! TCTCTAATATAATTGCACTT+TGG + chr1.4:70581961-70581980 MS.gene07187:intron 25.0%
! TTATAACCTATGCAAAGTTA+TGG + chr1.4:70581085-70581104 MS.gene07187:intron 25.0%
! TTATCTGCAATGAAATCAAA+GGG + chr1.4:70582907-70582926 MS.gene07187:CDS 25.0%
! TTTATCTGCAATGAAATCAA+AGG + chr1.4:70582906-70582925 MS.gene07187:CDS 25.0%
!! ATTTTCACTTTATGATTGTC+TGG + chr1.4:70583568-70583587 MS.gene07187:intron 25.0%
!! CATTGATTAATCTGTTAACA+AGG - chr1.4:70582735-70582754 None:intergenic 25.0%
!! CCAAAATGTTTTCTTATAGT+CGG - chr1.4:70581389-70581408 None:intergenic 25.0%
!! CCTTAGACACTATATTTTAT+AGG - chr1.4:70581732-70581751 None:intergenic 25.0%
!! GATTTTGAACTTTTTGTCAT+AGG + chr1.4:70583782-70583801 MS.gene07187:intron 25.0%
!! TTCTGTCATTTCTAGAAAAT+GGG - chr1.4:70582581-70582600 None:intergenic 25.0%
!! TTTTTATAGGGAAATGTTAG+CGG - chr1.4:70581701-70581720 None:intergenic 25.0%
!!! GTAGATTTTGGTCTAATAAT+TGG + chr1.4:70580674-70580693 MS.gene07187:intron 25.0%
!!! TGGTTTTAGAAGGAAAATTA+TGG - chr1.4:70582813-70582832 None:intergenic 25.0%
!!! TTAAGAATTGAGCTTTGTTT+TGG - chr1.4:70583390-70583409 None:intergenic 25.0%
!!! TTACTTTGTTTTTCTGTTTG+TGG + chr1.4:70581839-70581858 MS.gene07187:intron 25.0%
AAAAATCACCCTAATGTATC+CGG - chr1.4:70580491-70580510 None:intergenic 30.0%
AAACTTGAGAGAAAAGCTAT+TGG - chr1.4:70583096-70583115 None:intergenic 30.0%
AACAGAATATTACCATTCAG+TGG - chr1.4:70580354-70580373 None:intergenic 30.0%
AACTTTGATGGAAACAAGTT+TGG - chr1.4:70583459-70583478 None:intergenic 30.0%
AATGAGAGATGAAACTGAAA+TGG + chr1.4:70583338-70583357 MS.gene07187:CDS 30.0%
AATTCTCTTCAAGTAGTCAA+AGG + chr1.4:70582976-70582995 MS.gene07187:CDS 30.0%
AATTTAAGCCTAGCATTTCA+GGG + chr1.4:70580291-70580310 MS.gene07187:CDS 30.0%
ACTTTGATGGAAACAAGTTT+GGG - chr1.4:70583458-70583477 None:intergenic 30.0%
AGTGAAAATTGCTTACCTTA+AGG - chr1.4:70583557-70583576 None:intergenic 30.0%
ATAATTGCATATGGTAGACA+TGG - chr1.4:70582037-70582056 None:intergenic 30.0%
ATAGGTTCATCCAAACATAA+AGG + chr1.4:70583800-70583819 MS.gene07187:intron 30.0%
CTCATCCAAGTTAAGAAAAA+TGG - chr1.4:70583298-70583317 None:intergenic 30.0%
CTTCAGAATAAAATGGGAAA+AGG - chr1.4:70580773-70580792 None:intergenic 30.0%
GTAAGCTTAATGCATTGTTT+CGG + chr1.4:70584237-70584256 MS.gene07187:CDS 30.0%
GTCTGATTCTGATAATTTGA+GGG - chr1.4:70583601-70583620 None:intergenic 30.0%
TACCGTTTAAACATTGAAAC+TGG + chr1.4:70581144-70581163 MS.gene07187:intron 30.0%
TACTTCTTGTAGATCTGATT+TGG + chr1.4:70583146-70583165 MS.gene07187:CDS 30.0%
TATCATAGATAGTACTGTTG+TGG - chr1.4:70583251-70583270 None:intergenic 30.0%
TCAATATGACAATACTTGTG+TGG + chr1.4:70581428-70581447 MS.gene07187:intron 30.0%
TGCAGCATGTATATGATATT+AGG - chr1.4:70581922-70581941 None:intergenic 30.0%
TGGTACCTTCAGAATAAAAT+GGG - chr1.4:70580779-70580798 None:intergenic 30.0%
TGTCTGATTCTGATAATTTG+AGG - chr1.4:70583602-70583621 None:intergenic 30.0%
TTAGACCAAAATCTACTTCT+AGG - chr1.4:70580670-70580689 None:intergenic 30.0%
TTTCAGTTTCATCTCTCATT+CGG - chr1.4:70583338-70583357 None:intergenic 30.0%
! AGTTTTCATAAAAGACACGT+GGG - chr1.4:70581270-70581289 None:intergenic 30.0%
! ATCAGTTGATATCTTCCTTA+AGG + chr1.4:70583539-70583558 MS.gene07187:CDS 30.0%
! ATGTGATAATGACAATACAG+AGG - chr1.4:70580646-70580665 None:intergenic 30.0%
! CCGACTATAAGAAAACATTT+TGG + chr1.4:70581386-70581405 MS.gene07187:intron 30.0%
! CTTCTGTCATTTCTAGAAAA+TGG - chr1.4:70582582-70582601 None:intergenic 30.0%
! CTTTTCCCATTTTATTCTGA+AGG + chr1.4:70580771-70580790 MS.gene07187:intron 30.0%
! TGTGATAATGACAATACAGA+GGG - chr1.4:70580645-70580664 None:intergenic 30.0%
! TTAGCGGTTAGTTAGTTAAA+GGG - chr1.4:70581685-70581704 None:intergenic 30.0%
!! AATCTATAGTTTTGCATAGC+CGG - chr1.4:70583839-70583858 None:intergenic 30.0%
!! CATTTTTCTTAACTTGGATG+AGG + chr1.4:70583296-70583315 MS.gene07187:CDS 30.0%
!! GATATAAACTTGTTGGAATC+AGG - chr1.4:70583218-70583237 None:intergenic 30.0%
!! TAATCTCTTCTGAAATTGGT+AGG - chr1.4:70582711-70582730 None:intergenic 30.0%
AAAAGAAAAAGTTTCCCAGC+TGG - chr1.4:70580799-70580818 None:intergenic 35.0%
AACCTATGCAAAGTTATGGT+AGG + chr1.4:70581089-70581108 MS.gene07187:intron 35.0%
AACTCAATCAAGGAAAAGTC+AGG + chr1.4:70583068-70583087 MS.gene07187:CDS 35.0%
AAGGTAATACTCATGCATGT+TGG - chr1.4:70582270-70582289 None:intergenic 35.0%
AATGCATTGTTTCGGATGAA+TGG + chr1.4:70584245-70584264 MS.gene07187:CDS 35.0%
ACTGATGCATAGTTATCTCT+TGG - chr1.4:70584068-70584087 None:intergenic 35.0%
AGAAATGACAGAAGAATTCG+CGG + chr1.4:70582588-70582607 MS.gene07187:CDS 35.0%
ATCTTTAGGTAGCCTCTATA+AGG + chr1.4:70581330-70581349 MS.gene07187:intron 35.0%
ATGATACAGACTCAATTGTG+AGG + chr1.4:70583265-70583284 MS.gene07187:CDS 35.0%
ATGATTCTACAAACTCACGT+CGG - chr1.4:70580427-70580446 None:intergenic 35.0%
ATGCTTCTTGTGATAGTTTC+TGG - chr1.4:70583863-70583882 None:intergenic 35.0%
ATGTTTAAACGGTACCATGA+TGG - chr1.4:70581138-70581157 None:intergenic 35.0%
CACGTCTTCGATAAAAATGT+CGG + chr1.4:70581027-70581046 MS.gene07187:intron 35.0%
CCATATGCAATTATTCAGCT+AGG + chr1.4:70582043-70582062 MS.gene07187:intron 35.0%
CCTAGCTGAATAATTGCATA+TGG - chr1.4:70582046-70582065 None:intergenic 35.0%
CGAATCATATCTAAGAGAGA+CGG + chr1.4:70582633-70582652 MS.gene07187:CDS 35.0%
CGTCTCTCTTAGATATGATT+CGG - chr1.4:70582635-70582654 None:intergenic 35.0%
CTAGCTGCAAAATTCTGTTA+TGG + chr1.4:70582505-70582524 MS.gene07187:CDS 35.0%
CTGGTACCTTCAGAATAAAA+TGG - chr1.4:70580780-70580799 None:intergenic 35.0%
GAATTTAAGCCTAGCATTTC+AGG + chr1.4:70580290-70580309 MS.gene07187:CDS 35.0%
GAGTTTAAGAAGGAGGTTTA+GGG + chr1.4:70581633-70581652 MS.gene07187:intron 35.0%
GATTTGAAGAGCTTATTAGC+AGG - chr1.4:70584200-70584219 None:intergenic 35.0%
GCAAGTGAAATGAACTTTGA+TGG - chr1.4:70583471-70583490 None:intergenic 35.0%
GTAACCATATAAGTCTCTGA+AGG + chr1.4:70581577-70581596 MS.gene07187:intron 35.0%
GTGAGTTTGTAGAATCATGT+CGG + chr1.4:70580429-70580448 MS.gene07187:intron 35.0%
GTTTACTACCAACTCAATCA+AGG + chr1.4:70583058-70583077 MS.gene07187:CDS 35.0%
TCACTAGAGACATCAGATAT+CGG - chr1.4:70582084-70582103 None:intergenic 35.0%
TGCAGCATAAGACTATTCTA+AGG + chr1.4:70581938-70581957 MS.gene07187:intron 35.0%
TTCCTACCATAACTTTGCAT+AGG - chr1.4:70581094-70581113 None:intergenic 35.0%
! ACATGCCTAGAAGTAGATTT+TGG + chr1.4:70580662-70580681 MS.gene07187:intron 35.0%
! AGTGATCTTAGCATCGAAAT+AGG + chr1.4:70582099-70582118 MS.gene07187:CDS 35.0%
! GAGTTTTCATAAAAGACACG+TGG - chr1.4:70581271-70581290 None:intergenic 35.0%
! GTTAGCGGTTAGTTAGTTAA+AGG - chr1.4:70581686-70581705 None:intergenic 35.0%
! TACAGTTTCCTCTAGTTTCT+AGG + chr1.4:70582386-70582405 MS.gene07187:intron 35.0%
! TGACTTTTCCTTGATTGAGT+TGG - chr1.4:70583069-70583088 None:intergenic 35.0%
! TTACTTCAAGTTTCAGCTCA+CGG - chr1.4:70584103-70584122 None:intergenic 35.0%
! TTTCATAAGATGAGAGTACG+TGG - chr1.4:70580888-70580907 None:intergenic 35.0%
! TTTCTAGGAGTGGAAGAATT+AGG + chr1.4:70582401-70582420 MS.gene07187:CDS 35.0%
!! ACTTCGTGGTTTCATTTTTG+TGG + chr1.4:70580719-70580738 MS.gene07187:intron 35.0%
!! AGGCTAATCTCTTCTGAAAT+TGG - chr1.4:70582715-70582734 None:intergenic 35.0%
!! CTACTAACATAGCCTTATAG+AGG - chr1.4:70581345-70581364 None:intergenic 35.0%
!! CTTCGTGGTTTCATTTTTGT+GGG + chr1.4:70580720-70580739 MS.gene07187:intron 35.0%
!! GTTTATGATTTTGATAGCCC+AGG + chr1.4:70583360-70583379 MS.gene07187:CDS 35.0%
!! TCTCTAAGGTTAATACTTCG+TGG + chr1.4:70580705-70580724 MS.gene07187:intron 35.0%
!! TTTTCTTAACTTGGATGAGG+AGG + chr1.4:70583299-70583318 MS.gene07187:CDS 35.0%
!!! TCAGGTTCAATGGTTTTAGA+AGG - chr1.4:70582823-70582842 None:intergenic 35.0%
AACCTGAAACACCTTCAGAA+TGG + chr1.4:70582836-70582855 MS.gene07187:CDS 40.0%
AACGTCTCAACTCATATCAC+TGG - chr1.4:70581609-70581628 None:intergenic 40.0%
ACGTCTCAACTCATATCACT+GGG - chr1.4:70581608-70581627 None:intergenic 40.0%
AGTTTCACAACGGTGAAGAA+CGG - chr1.4:70582686-70582705 None:intergenic 40.0%
ATAAGTTTCCCTAGTGTACC+AGG + chr1.4:70582463-70582482 MS.gene07187:CDS 40.0%
ATCAAGTACGTAGACGAGAA+TGG - chr1.4:70581810-70581829 None:intergenic 40.0%
CACAATCAACTACTCTTTGG+TGG + chr1.4:70583984-70584003 MS.gene07187:CDS 40.0%
CACACCTTCAGAGACTTATA+TGG - chr1.4:70581584-70581603 None:intergenic 40.0%
CAGCTAGGTTTGTGTATTAC+AGG + chr1.4:70582058-70582077 MS.gene07187:intron 40.0%
CGTAATTTCGTCTAACTCAC+CGG + chr1.4:70580469-70580488 MS.gene07187:intron 40.0%
CTAACTCACCGGATACATTA+GGG + chr1.4:70580480-70580499 MS.gene07187:intron 40.0%
CTCTAGACAGAACCATACTA+TGG + chr1.4:70581218-70581237 MS.gene07187:intron 40.0%
CTTTATGATTGTCTGGACTC+TGG + chr1.4:70583575-70583594 MS.gene07187:intron 40.0%
GACGTTGAAGGAGTTTAAGA+AGG + chr1.4:70581623-70581642 MS.gene07187:intron 40.0%
GCATCTTAGCATAGCAACAT+TGG - chr1.4:70582554-70582573 None:intergenic 40.0%
GGACACAATCAACTACTCTT+TGG + chr1.4:70583981-70584000 MS.gene07187:CDS 40.0%
GGAGTTTAAGAAGGAGGTTT+AGG + chr1.4:70581632-70581651 MS.gene07187:intron 40.0%
GGATGTCTTCAAGAATTGCT+TGG - chr1.4:70583197-70583216 None:intergenic 40.0%
GTTGAAGGAGTTTAAGAAGG+AGG + chr1.4:70581626-70581645 MS.gene07187:intron 40.0%
TCTAACTCACCGGATACATT+AGG + chr1.4:70580479-70580498 MS.gene07187:intron 40.0%
TGAAACACCTTCAGAATGGT+GGG + chr1.4:70582840-70582859 MS.gene07187:CDS 40.0%
TGAAGAGAATACATGCAACG+AGG + chr1.4:70580523-70580542 MS.gene07187:intron 40.0%
TGAGAGACTACCAGTTCAAA+TGG + chr1.4:70583902-70583921 MS.gene07187:CDS 40.0%
TGCAAAGAGCAACTTACTTC+TGG + chr1.4:70582772-70582791 MS.gene07187:CDS 40.0%
TTCATGCTTTGCACTTCACA+AGG + chr1.4:70582125-70582144 MS.gene07187:CDS 40.0%
TTGGTAGGAGAGTTTCACAA+CGG - chr1.4:70582696-70582715 None:intergenic 40.0%
! ACTTGTACTGCCATTTGAAC+TGG - chr1.4:70583915-70583934 None:intergenic 40.0%
! ATAAGATGAGAGTACGTGGA+GGG - chr1.4:70580884-70580903 None:intergenic 40.0%
! GAGAATGAGACTCACTGATT+TGG + chr1.4:70584130-70584149 MS.gene07187:CDS 40.0%
! GATATGAGTTGAGACGTTGA+AGG + chr1.4:70581611-70581630 MS.gene07187:intron 40.0%
! GGTTTCCTTTTCCAAAGAGA+AGG + chr1.4:70584300-70584319 MS.gene07187:CDS 40.0%
! TCGATCACATTAGTCTCTGT+GGG + chr1.4:70583656-70583675 MS.gene07187:intron 40.0%
! TTTCCTCTAGTTTCTAGGAG+TGG + chr1.4:70582391-70582410 MS.gene07187:CDS 40.0%
!! CTACTCTTTGGTGGACTAAA+TGG + chr1.4:70583993-70584012 MS.gene07187:CDS 40.0%
!! GTAGATCTGATTTGGAGAGA+AGG + chr1.4:70583154-70583173 MS.gene07187:CDS 40.0%
!! TCTGATTTGGAGAGAAGGAT+TGG + chr1.4:70583159-70583178 MS.gene07187:CDS 40.0%
!! TGAAGGTGTTTCAGGTTCAA+TGG - chr1.4:70582833-70582852 None:intergenic 40.0%
!! TTATTCTGAAGGTACCAGCT+GGG + chr1.4:70580782-70580801 MS.gene07187:intron 40.0%
!! TTTATTCTGAAGGTACCAGC+TGG + chr1.4:70580781-70580800 MS.gene07187:intron 40.0%
!!! AGCTTTGTTTTGGAGATCCT+GGG - chr1.4:70583380-70583399 None:intergenic 40.0%
ACAGACTCGCAAGGACTAAA+TGG + chr1.4:70583700-70583719 MS.gene07187:intron 45.0%
ACCTAGTTAACAGACTCGCA+AGG + chr1.4:70583691-70583710 MS.gene07187:intron 45.0%
ACGTTCAGTTTGAGCCATCA+TGG + chr1.4:70581121-70581140 MS.gene07187:intron 45.0%
ATGGCACTGTAGTGAAACAC+TGG - chr1.4:70581516-70581535 None:intergenic 45.0%
CGCTCTGACTCCTTTATGTT+TGG - chr1.4:70583813-70583832 None:intergenic 45.0%
CTCTTCTTCCCTGAAATGCT+AGG - chr1.4:70580302-70580321 None:intergenic 45.0%
CTGAAACACCTTCAGAATGG+TGG + chr1.4:70582839-70582858 MS.gene07187:CDS 45.0%
CTTACAATTCGCGCATGATC+AGG - chr1.4:70583504-70583523 None:intergenic 45.0%
CTTCCACTCCTAGAAACTAG+AGG - chr1.4:70582397-70582416 None:intergenic 45.0%
GAAACACCTTCAGAATGGTG+GGG + chr1.4:70582841-70582860 MS.gene07187:CDS 45.0%
TAAAGGAGTCAGAGCGATAC+CGG + chr1.4:70583817-70583836 MS.gene07187:CDS 45.0%
TAACTTGGATGAGGAGGATG+AGG + chr1.4:70583305-70583324 MS.gene07187:CDS 45.0%
TCCTTGCGAGTCTGTTAACT+AGG - chr1.4:70583695-70583714 None:intergenic 45.0%
TTCGTCCAAGCTCAAGCATA+AGG + chr1.4:70580324-70580343 MS.gene07187:CDS 45.0%
! CATAAGATGAGAGTACGTGG+AGG - chr1.4:70580885-70580904 None:intergenic 45.0%
! CTCGATCACATTAGTCTCTG+TGG + chr1.4:70583655-70583674 MS.gene07187:intron 45.0%
! GATTTTCCCCACCATTCTGA+AGG - chr1.4:70582850-70582869 None:intergenic 45.0%
! GTCTCTCATTTTGTGCTGCA+TGG - chr1.4:70583890-70583909 None:intergenic 45.0%
! TGACGCCTTCTCTTTGGAAA+AGG - chr1.4:70584308-70584327 None:intergenic 45.0%
!! CACCATTCTGAAGGTGTTTC+AGG - chr1.4:70582841-70582860 None:intergenic 45.0%
!! TAAAGCGAATGGCGTTGGTT+CGG + chr1.4:70584271-70584290 MS.gene07187:CDS 45.0%
!!! GAGCTTTGTTTTGGAGATCC+TGG - chr1.4:70583381-70583400 None:intergenic 45.0%
AGTTTCCCTAGTGTACCAGG+TGG + chr1.4:70582466-70582485 MS.gene07187:CDS 50.0%
CATGCGCGAATTGTAAGCGA+TGG + chr1.4:70583507-70583526 MS.gene07187:CDS 50.0%
CGTCTTCGCAACGCTATGAA+CGG + chr1.4:70583954-70583973 MS.gene07187:CDS 50.0%
CGTTCATAGCGTTGCGAAGA+CGG - chr1.4:70583956-70583975 None:intergenic 50.0%
GCATAAGGCATGCCACTGAA+TGG + chr1.4:70580339-70580358 MS.gene07187:CDS 50.0%
GCATGCCTTATGCTTGAGCT+TGG - chr1.4:70580332-70580351 None:intergenic 50.0%
GGTCAATTCCCTCAACGTTC+AGG + chr1.4:70584014-70584033 MS.gene07187:CDS 50.0%
!! TCCAAAGAGAAGGCGTCACT+CGG + chr1.4:70584310-70584329 MS.gene07187:CDS 50.0%
ACCGAGTGACGCCTTCTCTT+TGG - chr1.4:70584314-70584333 None:intergenic 55.0%
CACCACTGCCTGAACGTTGA+GGG - chr1.4:70584025-70584044 None:intergenic 55.0%
CACGCAGCAGCACCATAGTA+TGG - chr1.4:70581233-70581252 None:intergenic 55.0%
CCACACCACCTGGTACACTA+GGG - chr1.4:70582474-70582493 None:intergenic 55.0%
CTTCGCAACGCTATGAACGG+AGG + chr1.4:70583957-70583976 MS.gene07187:CDS 55.0%
TAGTGTACCAGGTGGTGTGG+AGG + chr1.4:70582474-70582493 MS.gene07187:CDS 55.0%
TCAAATGCCTCCACACCACC+TGG - chr1.4:70582484-70582503 None:intergenic 55.0%
TCCACACCACCTGGTACACT+AGG - chr1.4:70582475-70582494 None:intergenic 55.0%
TTCCCTCAACGTTCAGGCAG+TGG + chr1.4:70584020-70584039 MS.gene07187:CDS 55.0%
! GATGAGAGTACGTGGAGGGT+TGG - chr1.4:70580880-70580899 None:intergenic 55.0%
!! ATGGCGTTGGTTCGGAGAGT+CGG + chr1.4:70584279-70584298 MS.gene07187:CDS 55.0%
!! CATACTATGGTGCTGCTGCG+TGG + chr1.4:70581231-70581250 MS.gene07187:intron 55.0%
CAACGTTCAGGCAGTGGTGC+AGG + chr1.4:70584026-70584045 MS.gene07187:CDS 60.0%
CCCTAGTGTACCAGGTGGTG+TGG + chr1.4:70582471-70582490 MS.gene07187:CDS 60.0%
CGCAACGCTATGAACGGAGG+AGG + chr1.4:70583960-70583979 MS.gene07187:CDS 60.0%
GCACCACTGCCTGAACGTTG+AGG - chr1.4:70584026-70584045 None:intergenic 60.0%
TCAGGCAGTGGTGCAGGAAG+TGG + chr1.4:70584032-70584051 MS.gene07187:CDS 60.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 70580269 70584340 70580269 ID=MS.gene07187
chr1.4 mRNA 70580269 70584340 70580269 ID=MS.gene07187.t1;Parent=MS.gene07187
chr1.4 exon 70580269 70580360 70580269 ID=MS.gene07187.t1.exon1;Parent=MS.gene07187.t1
chr1.4 CDS 70580269 70580360 70580269 ID=cds.MS.gene07187.t1;Parent=MS.gene07187.t1
chr1.4 exon 70582080 70582146 70582080 ID=MS.gene07187.t1.exon2;Parent=MS.gene07187.t1
chr1.4 CDS 70582080 70582146 70582080 ID=cds.MS.gene07187.t1;Parent=MS.gene07187.t1
chr1.4 exon 70582391 70583560 70582391 ID=MS.gene07187.t1.exon3;Parent=MS.gene07187.t1
chr1.4 CDS 70582391 70583560 70582391 ID=cds.MS.gene07187.t1;Parent=MS.gene07187.t1
chr1.4 exon 70583804 70584340 70583804 ID=MS.gene07187.t1.exon4;Parent=MS.gene07187.t1
chr1.4 CDS 70583804 70584340 70583804 ID=cds.MS.gene07187.t1;Parent=MS.gene07187.t1
Gene Sequence

>MS.gene07187

ATGGGAGTTGTCACTGTAGGTGAATTTAAGCCTAGCATTTCAGGGAAGAAGAGCTTTCGTCCAAGCTCAAGCATAAGGCATGCCACTGAATGGTAATATTCTGTTTCTTGTGTCTGTTTTTACTATTCAATTTTGGTTTTATTTGAATGTTTGGACCGACGTGAGTTTGTAGAATCATGTCGGAAAAATCACAGTGTCATCGTAATTTCGTCTAACTCACCGGATACATTAGGGTGATTTTTCTTTTTCTAAAGTGAAGAGAATACATGCAACGAGGACTTAATGAATAAAAATTAGGCAGAAAGACAAAAACTGATCTAATGAGTAATGACCCACTATAATATAAACTTTAAGAACAAATCTTAATTTTTTTCCCTCTGTATTGTCATTATCACATGCCTAGAAGTAGATTTTGGTCTAATAATTGGATTCAAATTCTCTAAGGTTAATACTTCGTGGTTTCATTTTTGTGGGTCTATATTCTACAATTAATACAACTGTCCTTTTCCCATTTTATTCTGAAGGTACCAGCTGGGAAACTTTTTCTTTTGTCTTGTAGTGTTGCTCATGTGTTAGTTAGTTCATCTCTTGTGTGCTTATTTTAATTTCCAACCCTCCACGTACTCTCATCTTATGAAACATTCACATAGACAAATAGACATGACACTGACATGTCGATATGTCAAAATTTGTAATAATTTATGTAAATTAATTAAATGTAATAACATATGTCATTATTTAATGTACATGACATCAAACACGTCTTCGATAAAAATGTCGGTTGCATAGAGTTTCTCGTGTAATTTGTTAACATATTTATAACCTATGCAAAGTTATGGTAGGAAAAGTAACACGTTCAGTTTGAGCCATCATGGTACCGTTTAAACATTGAAACTGGTAGATAAATTTAGCTTAACACGTGACATTGACTTTGATGTAATTGTGTACACTCTAGACAGAACCATACTATGGTGCTGCTGCGTGGTGAATGTCAAAATCCCACGTGTCTTTTATGAAAACTCCAATTAACATTTGTCTGCAATTATTCATGTATGTTTATTATCTTTAGGTAGCCTCTATAAGGCTATGTTAGTAGAGTTTGTCTAATAAGATGTCACCGACTATAAGAAAACATTTTGGCTGTACATAGCCTTAAACATCAATATGACAATACTTGTGTGGCACAAATGCTTTCCCTTTCTTATCAGTGAATTTTACTCATCAATGATTTAGATTAATGGGTTCCAGTGTTTCACTACAGTGCCATAATAACATATTCTACAATATTTTAATTATACTTTAACTCGTGTAACCATATAAGTCTCTGAAGGTGTGACCCAGTGATATGAGTTGAGACGTTGAAGGAGTTTAAGAAGGAGGTTTAGGGTTCGATCATGTTAACAATTTTTTTCTCCCTTTAACTAACTAACCGCTAACATTTCCCTATAAAAAAACATTTCCCTATAAAATATAGTGTCTAAGGTAATGTTGAAGACTTAAAGTAGTCCCACTCAAATTCTGTATTTATTGAATTGGGACCATTCTCGTCTACGTACTTGATCTTGCAAGATTACTTTGTTTTTCTGTTTGTGGTTAACAAAACACATACATTGAACTTCACCTTGTACATTAAATTGCATATACTATATACCTAATATCATATACATGCTGCAGCATAAGACTATTCTAAGGTCTCTAATATAATTGCACTTTGGTAATATGTATATATAGCTGCTTCAGTTGCTACTACTTTATATTGAATTTTCCATGTCTACCATATGCAATTATTCAGCTAGGTTTGTGTATTACAGGCCGATATCTGATGTCTCTAGTGATCTTAGCATCGAAATAGGAGCTTCATGCTTTGCACTTCACAAGGTAAAAAGAAAAGCTTCCTTTCTTTAAATGTTATTGCATATTCAGGTTTCAGCATAGTGTTCTTTGAAAAATAAAACTCTTAGGTACTATATAAATGGCATTTTTTCTGTCTTGAATATGCCAACATGCATGAGTATTACCTTAATGATAAAATTATGAAAATATTGCTTCATGTTTTCTTAAAAAATGGAAAGAGAGACAATATTGAAGTACTAATAAGTTGTTTGCAACTTTTTTTCTACAGTTTCCTCTAGTTTCTAGGAGTGGAAGAATTAGGAAACTATTGTTAGAATCAAAAGATTCTAAAGTTTCGCGCATAAGTTTCCCTAGTGTACCAGGTGGTGTGGAGGCATTTGAGCTAGCTGCAAAATTCTGTTATGGAATTAGCATTGAGTTCACTCTCTCCAATGTTGCTATGCTAAGATGCATAGCCCATTTTCTAGAAATGACAGAAGAATTCGCGGAGAAAAACTTGTTGACGCGAGCCGAATCATATCTAAGAGAGACGGTGCTTTCAAACACAGCAAACTCAATATCCGTTCTTCACCGTTGTGAAACTCTCCTACCAATTTCAGAAGAGATTAGCCTTGTTAACAGATTAATCAATGCAATTTCAAGTAATGTATGCAAAGAGCAACTTACTTCTGGTTTGCAAAAACTAGACCATAATTTTCCTTCTAAAACCATTGAACCTGAAACACCTTCAGAATGGTGGGGAAAATCACTTACTGTTCTTAATCTTGATTTCTTCAAAAGGGTTTTATCTGCAATGAAATCAAAGGGACTTAAACAAGATATTATCAGCAAAATTTTGATAAACTATGCACATAATTCTCTTCAAGTAGTCAAAGGAAATTTACTTGATTTAGAATTTTTGAAGAAACAAAGGGTCCTTGTTGAAACAATAACTAGTTTACTACCAACTCAATCAAGGAAAAGTCAGGTTCCAATAGCTTTTCTCTCAAGTTTGTTGAAATCTGCAATAGCAGCATCAGTTTCTACTTCTTGTAGATCTGATTTGGAGAGAAGGATTGGTCTACAACTTGACCAAGCAATTCTTGAAGACATCCTGATTCCAACAAGTTTATATCAAAATAATAACCACAACAGTACTATCTATGATACAGACTCAATTGTGAGGATTTTTTCCATTTTTCTTAACTTGGATGAGGAGGATGAGGACGATAGCCGAATGAGAGATGAAACTGAAATGGTTTATGATTTTGATAGCCCAGGATCTCCAAAACAAAGCTCAATTCTTAAGGTATCCAAATTGCTTGACAATTATCTTGCTGAAGTAGCTTTAGACCCAAACTTGTTTCCATCAAAGTTCATTTCACTTGCTGAGTTACTTCCTGATCATGCGCGAATTGTAAGCGATGGACTCTATAGATCAGTTGATATCTTCCTTAAGGTAAGCAATTTTCACTTTATGATTGTCTGGACTCTGGCCCTCAAATTATCAGAATCAGACAATTTGATATCTAAAAGCAATGAAATTGAAAATTCTCGATCACATTAGTCTCTGTGGGACATTTTTATATACCTAGTTAACAGACTCGCAAGGACTAAATGGTCGAGATTTTTTCAAATTCAATGACTATTCTGACATATCAACAATTTCACGACTAAACTGATTTTGAACTTTTTGTCATAGGTTCATCCAAACATAAAGGAGTCAGAGCGATACCGGCTATGCAAAACTATAGATTGCCAGAAACTATCACAAGAAGCATGCAGCCATGCAGCACAAAATGAGAGACTACCAGTTCAAATGGCAGTACAAGTTCTATACTTTGAACAAATCCGTCTTCGCAACGCTATGAACGGAGGAGGACACAATCAACTACTCTTTGGTGGACTAAATGGTCAATTCCCTCAACGTTCAGGCAGTGGTGCAGGAAGTGGAGCAATGTCACCAAGAGATAACTATGCATCAGTTAGAAGAGAGAACCGTGAGCTGAAACTTGAAGTAACAAGAATGAGAATGAGACTCACTGATTTGGAGAAAGATCATGTTTCTATGAAACAAGAGCTTGTTAAGTCTCATCCTGCTAATAAGCTCTTCAAATCATTCACCAAGAAATTAAGTAAGCTTAATGCATTGTTTCGGATGAATGGTATTAAAGCGAATGGCGTTGGTTCGGAGAGTCGGTTTCCTTTTCCAAAGAGAAGGCGTCACTCGGTTGCTTGA
Protein sequence

>MS.gene07187.t1

MGVVTVGEFKPSISGKKSFRPSSSIRHATEWPISDVSSDLSIEIGASCFALHKFPLVSRSGRIRKLLLESKDSKVSRISFPSVPGGVEAFELAAKFCYGISIEFTLSNVAMLRCIAHFLEMTEEFAEKNLLTRAESYLRETVLSNTANSISVLHRCETLLPISEEISLVNRLINAISSNVCKEQLTSGLQKLDHNFPSKTIEPETPSEWWGKSLTVLNLDFFKRVLSAMKSKGLKQDIISKILINYAHNSLQVVKGNLLDLEFLKKQRVLVETITSLLPTQSRKSQVPIAFLSSLLKSAIAASVSTSCRSDLERRIGLQLDQAILEDILIPTSLYQNNNHNSTIYDTDSIVRIFSIFLNLDEEDEDDSRMRDETEMVYDFDSPGSPKQSSILKVSKLLDNYLAEVALDPNLFPSKFISLAELLPDHARIVSDGLYRSVDIFLKVHPNIKESERYRLCKTIDCQKLSQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAMNGGGHNQLLFGGLNGQFPQRSGSGAGSGAMSPRDNYASVRRENRELKLEVTRMRMRLTDLEKDHVSMKQELVKSHPANKLFKSFTKKLSKLNALFRMNGIKANGVGSESRFPFPKRRRHSVA