AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene072281


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072281.t1 MTR_8g013045 80.602 665 109 3 1 649 1 661 0.0 1045
MS.gene072281.t1 MTR_8g013050 87.744 563 44 2 1 548 1 553 0.0 988
MS.gene072281.t1 MTR_8g013045 81.724 580 87 2 85 649 1 576 0.0 948
MS.gene072281.t1 MTR_6g061260 74.286 140 24 2 134 273 54 181 5.22e-61 201
MS.gene072281.t1 MTR_6g061110 76.596 47 10 1 142 188 8 53 3.77e-15 76.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072281.t1 AT3G07140 57.822 652 228 12 15 647 17 640 0.0 724
MS.gene072281.t1 AT3G07140 57.822 652 227 13 15 647 17 639 0.0 719

Find 138 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACACTTCTCTTCAACATTAT+TGG 0.144269 8.3:-75282415 None:intergenic
CTCCAGGAGGCTTTGCATTT+TGG 0.152387 8.3:-75281506 None:intergenic
ACCAGTTGAGCAATGGATTT+AGG 0.177758 8.3:-75280354 None:intergenic
CACATCAGGTTGATGCTTCT+TGG 0.204467 8.3:+75281559 MS.gene072281:CDS
TGTAATTTAAGAATCAATTT+TGG 0.216843 8.3:-75283968 None:intergenic
AGCTGGACTTTCAACCTTAA+TGG 0.235783 8.3:+75281776 MS.gene072281:CDS
AATTGTGCCTTGGTATATTA+AGG 0.245068 8.3:+75282461 MS.gene072281:CDS
GCCAATTCTGTCTAAATTAC+AGG 0.265163 8.3:+75282872 MS.gene072281:CDS
GCTCTTATTCTGCTCCTAAA+TGG 0.287131 8.3:+75281646 MS.gene072281:CDS
GACACCGAACAATTTGATTT+AGG 0.291674 8.3:+75282251 MS.gene072281:CDS
CCCTAAATCCATTGCTCAAC+TGG 0.292669 8.3:+75280353 MS.gene072281:CDS
CCAGTTGAGCAATGGATTTA+GGG 0.328102 8.3:-75280353 None:intergenic
TATAGATGGTCTATCCATTA+AGG 0.337637 8.3:-75281790 None:intergenic
CATATGCTACAGTATTCTTC+TGG 0.350890 8.3:-75282094 None:intergenic
CATGTTAGGCATACTGAAAT+CGG 0.351035 8.3:-75283037 None:intergenic
TGGTCTCTGAGCTCAATATT+TGG 0.352079 8.3:+75281981 MS.gene072281:CDS
ACCTTACAATTATTAGTAGA+TGG 0.358149 8.3:+75282495 MS.gene072281:CDS
CTTAAATTACAATTGGTTGC+AGG 0.358248 8.3:+75283980 MS.gene072281:CDS
GCTGACTGAAACGCCCATTT+AGG 0.364898 8.3:-75281660 None:intergenic
CTTTGATGTCCCTCCACATC+AGG 0.367222 8.3:+75281545 MS.gene072281:CDS
AGTTCTCTATGAATCTTATC+TGG 0.367319 8.3:-75282179 None:intergenic
CCTGCAGATGGGTTAAATTC+TGG 0.372733 8.3:+75281864 MS.gene072281:CDS
ACCTGTAATTTAGACAGAAT+TGG 0.378654 8.3:-75282873 None:intergenic
GATCATTATTTCATCGTCTT+CGG 0.383151 8.3:+75280194 MS.gene072281:CDS
AAAATATCACATTAAAGAAA+TGG 0.384568 8.3:+75281419 MS.gene072281:CDS
CTAGACCTCTCTCAACTTGT+AGG 0.384751 8.3:-75282052 None:intergenic
CATGGAAGTATCCAGTTGTT+TGG 0.397929 8.3:+75282279 MS.gene072281:CDS
ATTGATTCTTAAATTACAAT+TGG 0.398719 8.3:+75283973 MS.gene072281:CDS
CTCTTATTCTGCTCCTAAAT+GGG 0.403068 8.3:+75281647 MS.gene072281:CDS
AGATAAGATTCATAGAGAAC+TGG 0.406643 8.3:+75282181 MS.gene072281:CDS
TCCATCTACTAATAATTGTA+AGG 0.407931 8.3:-75282496 None:intergenic
TGCAAACCAGCGTGGAAGTC+AGG 0.412878 8.3:-75282822 None:intergenic
GCCTTAGGTAGTTTAAGATA+TGG 0.427568 8.3:+75281681 MS.gene072281:CDS
ATGGATAGACCATCTATATA+CGG 0.428674 8.3:+75281795 MS.gene072281:CDS
CAACTGGATACTTCCATGTT+AGG 0.429662 8.3:-75282274 None:intergenic
TGCGAGGAGGACCAAACAAC+TGG 0.432793 8.3:-75282290 None:intergenic
GTAATTGTAATGACCATGTT+AGG 0.436517 8.3:-75283051 None:intergenic
AGAAGAGACCTGACAGAGAA+TGG 0.436734 8.3:-75281593 None:intergenic
ACTTCTGTGTATGAGAGAAC+AGG 0.437247 8.3:-75282991 None:intergenic
GCGAAGGAATGTTCATGAAT+AGG 0.437831 8.3:-75280312 None:intergenic
TAACCCATCTGCAGGAGCTC+TGG 0.448442 8.3:-75281856 None:intergenic
ATGTTCATGAATAGGAGCTT+TGG 0.453096 8.3:-75280304 None:intergenic
ATAAGAGAGAGAATCCTTGT+TGG 0.454251 8.3:-75280159 None:intergenic
TTGCAGGAATTGCTGTTGTA+TGG 0.455800 8.3:+75283996 MS.gene072281:CDS
AATTTAACCCATTCTCTGTC+AGG 0.457207 8.3:+75281585 MS.gene072281:CDS
TTAATGGGAAGTGGAAATGA+AGG 0.458336 8.3:+75282338 MS.gene072281:CDS
TGGATTTAGGGAAGAGGTGG+TGG 0.460829 8.3:-75280341 None:intergenic
GGAAAGCTTATTATTGCTGA+TGG 0.462385 8.3:-75282801 None:intergenic
ATTAAATATAGAGTTTGATA+AGG 0.464992 8.3:+75282638 MS.gene072281:CDS
TGGGCGTTTCAGTCAGCCTT+AGG 0.466742 8.3:+75281666 MS.gene072281:CDS
GTCGATGGAACTATGAAAGA+TGG 0.474999 8.3:+75281460 MS.gene072281:CDS
GAAGTGTTGAGAAGGAATCT+TGG 0.477476 8.3:+75282137 MS.gene072281:CDS
AGCTCAGAGACCAGCTTGGT+TGG 0.478037 8.3:-75281971 None:intergenic
GAGAACCTTACGATCGGGTA+AGG 0.479554 8.3:-75280262 None:intergenic
AGCCAAAATGCAAAGCCTCC+TGG 0.482782 8.3:+75281504 MS.gene072281:CDS
ATACCAGCTCTCTGAACATT+AGG 0.483067 8.3:-75281924 None:intergenic
CTGTATGAATATTCGATCAA+AGG 0.490726 8.3:+75282221 MS.gene072281:CDS
TCAAGTCCTTGATTAGCATC+TGG 0.491130 8.3:-75282774 None:intergenic
TAAAAGCTTCCGTATATAGA+TGG 0.497060 8.3:-75281804 None:intergenic
AGAATCCTTGTTGGAGCAAG+AGG 0.497210 8.3:-75280150 None:intergenic
TGTATGAATATTCGATCAAA+GGG 0.497584 8.3:+75282222 MS.gene072281:CDS
TAGGCCTAAATCAAATTGTT+CGG 0.501261 8.3:-75282255 None:intergenic
ATAAATTGTCTGTGAGGCTA+AGG 0.503797 8.3:+75283882 MS.gene072281:CDS
CAGCCTAATGTTCAGAGAGC+TGG 0.504681 8.3:+75281921 MS.gene072281:CDS
TCTGAAGACAAAGTATCATC+AGG 0.516675 8.3:+75282567 MS.gene072281:CDS
ATGTTCTACAAATTGTGCCT+TGG 0.517639 8.3:+75282451 MS.gene072281:CDS
ATTTCCTTGTGAGATCAAAT+CGG 0.522529 8.3:+75282611 MS.gene072281:CDS
TGCTAAAGGTACTTCAAGGA+CGG 0.522815 8.3:+75283106 MS.gene072281:CDS
CAAAGTATCATCAGGAGTGA+TGG 0.524222 8.3:+75282575 MS.gene072281:CDS
GCCATATCTTAAACTACCTA+AGG 0.524369 8.3:-75281682 None:intergenic
CTTCCTTGTCGAGACAAAGC+TGG 0.524567 8.3:+75281759 MS.gene072281:CDS
AAGGTACTTCAAGGACGGGT+TGG 0.529349 8.3:+75283111 MS.gene072281:CDS
ACATCCAGAGCTCCTGCAGA+TGG 0.529420 8.3:+75281852 MS.gene072281:CDS
CCAGAATTTAACCCATCTGC+AGG 0.535842 8.3:-75281864 None:intergenic
ATAAAATCTGTGACTACTTG+AGG 0.538408 8.3:-75282522 None:intergenic
GATGATACTTTGTCTTCAGA+AGG 0.538570 8.3:-75282564 None:intergenic
GAAGAGACCTGACAGAGAAT+GGG 0.538670 8.3:-75281592 None:intergenic
TCGATGGAACTATGAAAGAT+GGG 0.539612 8.3:+75281461 MS.gene072281:CDS
AGAACCTTACGATCGGGTAA+GGG 0.541183 8.3:-75280261 None:intergenic
AATACAGAATGACGAGGATG+AGG 0.541646 8.3:-75283942 None:intergenic
GCCTCCTGGAGTTGAACTGT+GGG 0.543091 8.3:+75281518 MS.gene072281:CDS
TACCCTCCAGATGCTAATCA+AGG 0.543132 8.3:+75282768 MS.gene072281:CDS
GCTAAAGGTACTTCAAGGAC+GGG 0.543584 8.3:+75283107 MS.gene072281:CDS
TATCTTTCACGCAAGGTCGA+TGG 0.543887 8.3:+75281445 MS.gene072281:CDS
CTGAAATCGGGAGTTGCCAC+GGG 0.543907 8.3:-75283024 None:intergenic
ATGTTAGGCATACTGAAATC+GGG 0.544148 8.3:-75283036 None:intergenic
TAAACCCTTACCCGATCGTA+AGG 0.547466 8.3:+75280257 MS.gene072281:CDS
TAATGGGAAGTGGAAATGAA+GGG 0.549864 8.3:+75282339 MS.gene072281:CDS
GAGCAATGGATTTAGGGAAG+AGG 0.550828 8.3:-75280347 None:intergenic
CGAATATTCATACAGAATTG+TGG 0.556514 8.3:-75282213 None:intergenic
AACTAAAGATCCAACCAAGC+TGG 0.557926 8.3:+75281961 MS.gene072281:CDS
CGATTTCAGTATGCCTAACA+TGG 0.559988 8.3:+75283038 MS.gene072281:CDS
CGATGCCTCTTGCTCCAACA+AGG 0.560313 8.3:+75280145 None:intergenic
GAAAGCTTATTATTGCTGAT+GGG 0.561165 8.3:-75282800 None:intergenic
CAAGAAGCATCAACCTGATG+TGG 0.562937 8.3:-75281558 None:intergenic
TCAAGGACGGGTTGGAGATG+AGG 0.569505 8.3:+75283119 MS.gene072281:CDS
TGTGCGAGAACCTTACGATC+GGG 0.569559 8.3:-75280267 None:intergenic
GTTCAGAGAATCTTACTCCA+TGG 0.570312 8.3:+75281727 MS.gene072281:CDS
AATTTGATTTAGGCCTAACA+TGG 0.582825 8.3:+75282261 MS.gene072281:CDS
ACTGAAATCGGGAGTTGCCA+CGG 0.585915 8.3:-75283025 None:intergenic
CTTCTGTGTATGAGAGAACA+GGG 0.587963 8.3:-75282990 None:intergenic
GAAGCATCAACCTGATGTGG+AGG 0.588264 8.3:-75281555 None:intergenic
CATCCAGAGCTCCTGCAGAT+GGG 0.589869 8.3:+75281853 MS.gene072281:CDS
CAATGGATTTAGGGAAGAGG+TGG 0.591140 8.3:-75280344 None:intergenic
CAGATACAGAAGTGTTGAGA+AGG 0.592133 8.3:+75282129 MS.gene072281:CDS
AATTGTCTGTGAGGCTAAGG+AGG 0.592286 8.3:+75283885 MS.gene072281:CDS
ATGTGCGAGAACCTTACGAT+CGG 0.593011 8.3:-75280268 None:intergenic
GGCATAGAAAGGTGCATGCG+AGG 0.594268 8.3:-75282306 None:intergenic
ATGCTACAGTATTCTTCTGG+AGG 0.594802 8.3:-75282091 None:intergenic
CAGACACACCAGTTGAGCAA+TGG 0.598211 8.3:-75280361 None:intergenic
ATGGAGTTATCTTTCACGCA+AGG 0.600821 8.3:+75281438 MS.gene072281:CDS
GATAAGATTCATAGAGAACT+GGG 0.604081 8.3:+75282182 MS.gene072281:CDS
ACTGCCCACAGTTCAACTCC+AGG 0.606672 8.3:-75281522 None:intergenic
CAGCTTTGTCTCGACAAGGA+AGG 0.609130 8.3:-75281758 None:intergenic
ATTGAGCTCAGAGACCAGCT+TGG 0.610108 8.3:-75281975 None:intergenic
ATTTATTTAGTGCTCGACAA+AGG 0.615134 8.3:-75283865 None:intergenic
GAGGTGGTGGTAACGTGCGA+AGG 0.618917 8.3:-75280328 None:intergenic
AGCCTCCTGGAGTTGAACTG+TGG 0.620819 8.3:+75281517 MS.gene072281:CDS
CAGAAAATTGCAAACCAGCG+TGG 0.624052 8.3:-75282830 None:intergenic
AGTCCTTGATTAGCATCTGG+AGG 0.625682 8.3:-75282771 None:intergenic
GTCCTTGATTAGCATCTGGA+GGG 0.628789 8.3:-75282770 None:intergenic
GGATGATCGTTGTGGTTGCG+TGG 0.629131 8.3:-75283921 None:intergenic
CACTAAATAAATTGTCTGTG+AGG 0.630010 8.3:+75283876 MS.gene072281:CDS
AGCTTTCCTGACTTCCACGC+TGG 0.632310 8.3:+75282816 MS.gene072281:CDS
AAGCATCAACCTGATGTGGA+GGG 0.647641 8.3:-75281554 None:intergenic
TGATCTCACAAGGAAATCTG+AGG 0.650893 8.3:-75282605 None:intergenic
GTCTACCTACAAGTTGAGAG+AGG 0.658119 8.3:+75282047 MS.gene072281:CDS
CGATGGAACTATGAAAGATG+GGG 0.659970 8.3:+75281462 MS.gene072281:CDS
TGGAACTATGAAAGATGGGG+CGG 0.664901 8.3:+75281465 MS.gene072281:CDS
ATAGAAAGGTGCATGCGAGG+AGG 0.676685 8.3:-75282303 None:intergenic
AGTCCAGCTTTGTCTCGACA+AGG 0.683404 8.3:-75281762 None:intergenic
TAGTATACCTTAATATACCA+AGG 0.686666 8.3:-75282468 None:intergenic
CAAGGAAGGAGTTTCAACCA+TGG 0.692207 8.3:-75281744 None:intergenic
TCTGAACAGACAGCTTCACG+CGG 0.699679 8.3:-75281711 None:intergenic
TGGAGTAATACAGAATGACG+AGG 0.701570 8.3:-75283948 None:intergenic
ACAGCCGATTTGATCTCACA+AGG 0.702294 8.3:-75282615 None:intergenic
GAGGATGAGGATGATCGTTG+TGG 0.710002 8.3:-75283929 None:intergenic
GCCCACAGTTCAACTCCAGG+AGG 0.711482 8.3:-75281519 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATAAAATATATTTTGGTT+TGG + chr8.3:75283640-75283659 MS.gene072281:intron 10.0%
!!! TTATAGTTAATTTTATTGTA+GGG + chr8.3:75280396-75280415 MS.gene072281:intron 10.0%
!!! TTTATAGTTAATTTTATTGT+AGG + chr8.3:75280395-75280414 MS.gene072281:intron 10.0%
!! AAAATATCACATTAAAGAAA+TGG + chr8.3:75281419-75281438 MS.gene072281:CDS 15.0%
!! AGAAAGAATACTAAAATAAA+AGG - chr8.3:75283718-75283737 None:intergenic 15.0%
!! ATATATATACTATAATCTGT+GGG + chr8.3:75283561-75283580 MS.gene072281:intron 15.0%
!! ATTAAATATAGAGTTTGATA+AGG + chr8.3:75282638-75282657 MS.gene072281:CDS 15.0%
!! TAGTATTAAAAAAAAATGCA+TGG + chr8.3:75283746-75283765 MS.gene072281:intron 15.0%
!! TATATATATACTATAATCTG+TGG + chr8.3:75283560-75283579 MS.gene072281:intron 15.0%
!!! ATTATTTTACAATATAGCAA+AGG + chr8.3:75281031-75281050 MS.gene072281:intron 15.0%
!!! ATTGATTCTTAAATTACAAT+TGG + chr8.3:75283973-75283992 MS.gene072281:CDS 15.0%
!!! ATTTGTATTTCTTTTTCTTT+TGG + chr8.3:75282682-75282701 MS.gene072281:intron 15.0%
!!! TGTAATTTAAGAATCAATTT+TGG - chr8.3:75283971-75283990 None:intergenic 15.0%
!!! TTATTTTACAATATAGCAAA+GGG + chr8.3:75281032-75281051 MS.gene072281:intron 15.0%
!! AGAATACTAAAATAAAAGGA+AGG - chr8.3:75283714-75283733 None:intergenic 20.0%
!! ATTTAAACTTCAGAATTACA+AGG - chr8.3:75283624-75283643 None:intergenic 20.0%
!! TATATATCATTCGATGTATA+AGG - chr8.3:75283544-75283563 None:intergenic 20.0%
!! TGTAGGATTAACAAATAATT+GGG + chr8.3:75280739-75280758 MS.gene072281:intron 20.0%
!! TTAAAAGACAATGAGTTTAT+TGG - chr8.3:75280520-75280539 None:intergenic 20.0%
!! TTGTAGGATTAACAAATAAT+TGG + chr8.3:75280738-75280757 MS.gene072281:intron 20.0%
!! TTTAGCTGAAACAAAATATA+TGG - chr8.3:75283347-75283366 None:intergenic 20.0%
!!! AAGATAATTTTACCAACTTT+TGG - chr8.3:75280607-75280626 None:intergenic 20.0%
!!! ATTATCTTCAAGTTTGTTTT+TGG + chr8.3:75280619-75280638 MS.gene072281:intron 20.0%
!!! GTATTTTGTATTTTTGCTAA+AGG + chr8.3:75283092-75283111 MS.gene072281:CDS 20.0%
!!! TAATGTGATATTTTTTAACC+TGG - chr8.3:75281413-75281432 None:intergenic 20.0%
! ACAAAATATATGGTAACACT+AGG - chr8.3:75283337-75283356 None:intergenic 25.0%
! ACATGAAAATTACACATGAA+TGG - chr8.3:75281280-75281299 None:intergenic 25.0%
! ACATGTTAATTAGTACATTC+AGG - chr8.3:75281373-75281392 None:intergenic 25.0%
! ACCTTACAATTATTAGTAGA+TGG + chr8.3:75282495-75282514 MS.gene072281:CDS 25.0%
! AGAATAAAGTGAATCATAAG+AGG - chr8.3:75283495-75283514 None:intergenic 25.0%
! GTAGGATTAACAAATAATTG+GGG + chr8.3:75280740-75280759 MS.gene072281:intron 25.0%
! TACAAGGATATTCATATTCA+TGG - chr8.3:75283608-75283627 None:intergenic 25.0%
! TAGGATTAACAAATAATTGG+GGG + chr8.3:75280741-75280760 MS.gene072281:intron 25.0%
! TAGTATACCTTAATATACCA+AGG - chr8.3:75282471-75282490 None:intergenic 25.0%
! TCCATCTACTAATAATTGTA+AGG - chr8.3:75282499-75282518 None:intergenic 25.0%
! TGAATGTACTAATTAACATG+TGG + chr8.3:75281372-75281391 MS.gene072281:intron 25.0%
! TGTATGAATATTCGATCAAA+GGG + chr8.3:75282222-75282241 MS.gene072281:CDS 25.0%
!! AGTAAAAGAAGAATTTTCTG+AGG + chr8.3:75280224-75280243 MS.gene072281:CDS 25.0%
!! ATGAGTTCTATTTTATACTG+AGG + chr8.3:75283285-75283304 MS.gene072281:intron 25.0%
!! TATGCCAGTAGATTTTTAAT+GGG + chr8.3:75282323-75282342 MS.gene072281:CDS 25.0%
!!! GAAAGACTTTTGAAAAACAA+AGG + chr8.3:75283141-75283160 MS.gene072281:CDS 25.0%
!!! TTTTGTTTCAGCTAAAAATG+TGG + chr8.3:75283351-75283370 MS.gene072281:intron 25.0%
AAAAATCTACTGGCATAGAA+AGG - chr8.3:75282320-75282339 None:intergenic 30.0%
AAAGCGATACAATTGCTTAA+AGG - chr8.3:75281007-75281026 None:intergenic 30.0%
AACATCAAATGAAATCTGCT+AGG + chr8.3:75280959-75280978 MS.gene072281:intron 30.0%
AATTGTGCCTTGGTATATTA+AGG + chr8.3:75282461-75282480 MS.gene072281:CDS 30.0%
ACAAAAGAATGTCAAAAGTG+AGG - chr8.3:75282715-75282734 None:intergenic 30.0%
ACACTTCTCTTCAACATTAT+TGG - chr8.3:75282418-75282437 None:intergenic 30.0%
ACATCAAATGAAATCTGCTA+GGG + chr8.3:75280960-75280979 MS.gene072281:intron 30.0%
ACATGGAAACTAAAGCTATA+CGG - chr8.3:75283778-75283797 None:intergenic 30.0%
ACCTGTAATTTAGACAGAAT+TGG - chr8.3:75282876-75282895 None:intergenic 30.0%
ACGGTAATCTTACATTTACT+GGG - chr8.3:75282932-75282951 None:intergenic 30.0%
ACTTCCCATTAAAAATCTAC+TGG - chr8.3:75282330-75282349 None:intergenic 30.0%
AGATAAGATTCATAGAGAAC+TGG + chr8.3:75282181-75282200 MS.gene072281:CDS 30.0%
AGGATTAACAAATAATTGGG+GGG + chr8.3:75280742-75280761 MS.gene072281:intron 30.0%
AGTTCTCTATGAATCTTATC+TGG - chr8.3:75282182-75282201 None:intergenic 30.0%
ATAAAATCTGTGACTACTTG+AGG - chr8.3:75282525-75282544 None:intergenic 30.0%
ATAGCAATTTAATGTCTCCT+AGG + chr8.3:75281176-75281195 MS.gene072281:intron 30.0%
ATGATAATCTAAGTCCAATG+TGG + chr8.3:75280564-75280583 MS.gene072281:intron 30.0%
ATGGATAGACCATCTATATA+CGG + chr8.3:75281795-75281814 MS.gene072281:CDS 30.0%
ATTTATTTAGTGCTCGACAA+AGG - chr8.3:75283868-75283887 None:intergenic 30.0%
ATTTCCTTGTGAGATCAAAT+CGG + chr8.3:75282611-75282630 MS.gene072281:CDS 30.0%
CACTAAATAAATTGTCTGTG+AGG + chr8.3:75283876-75283895 MS.gene072281:CDS 30.0%
CACTTGATATGATAAGGATA+CGG + chr8.3:75280815-75280834 MS.gene072281:intron 30.0%
CGAATATTCATACAGAATTG+TGG - chr8.3:75282216-75282235 None:intergenic 30.0%
CTGTATGAATATTCGATCAA+AGG + chr8.3:75282221-75282240 MS.gene072281:CDS 30.0%
CTTAAATTACAATTGGTTGC+AGG + chr8.3:75283980-75283999 MS.gene072281:CDS 30.0%
CTTAGACACTTGATATGATA+AGG + chr8.3:75280809-75280828 MS.gene072281:intron 30.0%
GAAAGCTTATTATTGCTGAT+GGG - chr8.3:75282803-75282822 None:intergenic 30.0%
GATAAGATTCATAGAGAACT+GGG + chr8.3:75282182-75282201 MS.gene072281:CDS 30.0%
GATCATTATTTCATCGTCTT+CGG + chr8.3:75280194-75280213 MS.gene072281:CDS 30.0%
GTAATTGTAATGACCATGTT+AGG - chr8.3:75283054-75283073 None:intergenic 30.0%
GTACTAATTAACATGTGGAT+TGG + chr8.3:75281377-75281396 MS.gene072281:intron 30.0%
TAAAAGCTTCCGTATATAGA+TGG - chr8.3:75281807-75281826 None:intergenic 30.0%
TACATGTAGCAATCAAAGTT+TGG - chr8.3:75283669-75283688 None:intergenic 30.0%
TACTTGTAACCCAAGATATT+GGG - chr8.3:75283187-75283206 None:intergenic 30.0%
TAGGCCTAAATCAAATTGTT+CGG - chr8.3:75282258-75282277 None:intergenic 30.0%
TATAGATGGTCTATCCATTA+AGG - chr8.3:75281793-75281812 None:intergenic 30.0%
TTAAAATGCAAGACACGATA+CGG + chr8.3:75280854-75280873 MS.gene072281:intron 30.0%
TTACTTGTAACCCAAGATAT+TGG - chr8.3:75283188-75283207 None:intergenic 30.0%
! AATTTGATTTAGGCCTAACA+TGG + chr8.3:75282261-75282280 MS.gene072281:CDS 30.0%
! AGTAGATTTTTAATGGGAAG+TGG + chr8.3:75282329-75282348 MS.gene072281:CDS 30.0%
! CACTTTTGACATTCTTTTGT+TGG + chr8.3:75282715-75282734 MS.gene072281:intron 30.0%
! CTATGCCAGTAGATTTTTAA+TGG + chr8.3:75282322-75282341 MS.gene072281:CDS 30.0%
!!! GGACTAGTTTTGTAATTTGT+AGG + chr8.3:75280722-75280741 MS.gene072281:intron 30.0%
!!! TTTGCATTTTGGCTTGATAT+TGG - chr8.3:75281498-75281517 None:intergenic 30.0%
!!! TTTTTGCTAAAGGTACTTCA+AGG + chr8.3:75283102-75283121 MS.gene072281:CDS 30.0%
AAAGTGAATCATAAGAGGTG+AGG - chr8.3:75283490-75283509 None:intergenic 35.0%
AAATAAAAGGAAGGAGACCA+AGG - chr8.3:75283705-75283724 None:intergenic 35.0%
AATAAAAGGAAGGAGACCAA+GGG - chr8.3:75283704-75283723 None:intergenic 35.0%
AATTTAACCCATTCTCTGTC+AGG + chr8.3:75281585-75281604 MS.gene072281:CDS 35.0%
ACACATGAATGGAATGTAAG+CGG - chr8.3:75281269-75281288 None:intergenic 35.0%
AGTCCCTAAAGTAAAGACTA+AGG - chr8.3:75280707-75280726 None:intergenic 35.0%
ATAAATTGTCTGTGAGGCTA+AGG + chr8.3:75283882-75283901 MS.gene072281:CDS 35.0%
ATAAGAGAGAGAATCCTTGT+TGG - chr8.3:75280162-75280181 None:intergenic 35.0%
ATCCAGACTGATAAGTATGA+CGG - chr8.3:75282951-75282970 None:intergenic 35.0%
ATGTTAGGCATACTGAAATC+GGG - chr8.3:75283039-75283058 None:intergenic 35.0%
ATGTTCATGAATAGGAGCTT+TGG - chr8.3:75280307-75280326 None:intergenic 35.0%
ATGTTCTACAAATTGTGCCT+TGG + chr8.3:75282451-75282470 MS.gene072281:CDS 35.0%
CATATGCTACAGTATTCTTC+TGG - chr8.3:75282097-75282116 None:intergenic 35.0%
CATGTTAGGCATACTGAAAT+CGG - chr8.3:75283040-75283059 None:intergenic 35.0%
CCATTTGAACTCTATGTAGA+AGG - chr8.3:75281150-75281169 None:intergenic 35.0%
CCTAAAGTAAAGACTAAGGA+GGG - chr8.3:75280703-75280722 None:intergenic 35.0%
CCTTCTACATAGAGTTCAAA+TGG + chr8.3:75281147-75281166 MS.gene072281:intron 35.0%
CGGTAATCTTACATTTACTG+GGG - chr8.3:75282931-75282950 None:intergenic 35.0%
CTCTTATTCTGCTCCTAAAT+GGG + chr8.3:75281647-75281666 MS.gene072281:CDS 35.0%
CTGAGTACGAATAAAAGACA+TGG - chr8.3:75283795-75283814 None:intergenic 35.0%
GACGGTAATCTTACATTTAC+TGG - chr8.3:75282933-75282952 None:intergenic 35.0%
GATGATACTTTGTCTTCAGA+AGG - chr8.3:75282567-75282586 None:intergenic 35.0%
GCCAATTCTGTCTAAATTAC+AGG + chr8.3:75282872-75282891 MS.gene072281:CDS 35.0%
GCCATATCTTAAACTACCTA+AGG - chr8.3:75281685-75281704 None:intergenic 35.0%
GGAAAGCTTATTATTGCTGA+TGG - chr8.3:75282804-75282823 None:intergenic 35.0%
GTCTATCAAACACCATCATA+GGG - chr8.3:75283245-75283264 None:intergenic 35.0%
TAATGGGAAGTGGAAATGAA+GGG + chr8.3:75282339-75282358 MS.gene072281:CDS 35.0%
TCAGTCTGGATCTTTAATGT+AGG + chr8.3:75282960-75282979 MS.gene072281:intron 35.0%
TCGATGGAACTATGAAAGAT+GGG + chr8.3:75281461-75281480 MS.gene072281:CDS 35.0%
TCTTGTAGTCCCAATATCTT+GGG + chr8.3:75283175-75283194 MS.gene072281:intron 35.0%
TGTCTATCAAACACCATCAT+AGG - chr8.3:75283246-75283265 None:intergenic 35.0%
TTAATGGGAAGTGGAAATGA+AGG + chr8.3:75282338-75282357 MS.gene072281:CDS 35.0%
TTTGATAGACAAGCTAGAAC+AGG + chr8.3:75283255-75283274 MS.gene072281:intron 35.0%
TTTGGCACTCAAGACATATT+GGG - chr8.3:75283394-75283413 None:intergenic 35.0%
! CCTCCTTAGTCTTTACTTTA+GGG + chr8.3:75280701-75280720 MS.gene072281:intron 35.0%
! GACACCGAACAATTTGATTT+AGG + chr8.3:75282251-75282270 MS.gene072281:CDS 35.0%
! GCCTTAGGTAGTTTAAGATA+TGG + chr8.3:75281681-75281700 MS.gene072281:CDS 35.0%
! TCTGAAGACAAAGTATCATC+AGG + chr8.3:75282567-75282586 MS.gene072281:CDS 35.0%
! TTTTGGCACTCAAGACATAT+TGG - chr8.3:75283395-75283414 None:intergenic 35.0%
!! ATTAACATGTGGATTGGTGT+TGG + chr8.3:75281383-75281402 MS.gene072281:intron 35.0%
!! ATTCTTTTGTTGGTCTGCAT+AGG + chr8.3:75282725-75282744 MS.gene072281:intron 35.0%
!! TTCTTTTGTTGGTCTGCATA+GGG + chr8.3:75282726-75282745 MS.gene072281:intron 35.0%
AACACCATCATAGGGTTCAT+AGG - chr8.3:75283237-75283256 None:intergenic 40.0%
AACTAAAGATCCAACCAAGC+TGG + chr8.3:75281961-75281980 MS.gene072281:CDS 40.0%
AATACAGAATGACGAGGATG+AGG - chr8.3:75283945-75283964 None:intergenic 40.0%
ACACCATCATAGGGTTCATA+GGG - chr8.3:75283236-75283255 None:intergenic 40.0%
ACTGTTGTGTTCACGATGAT+TGG + chr8.3:75281205-75281224 MS.gene072281:intron 40.0%
ACTTCTGTGTATGAGAGAAC+AGG - chr8.3:75282994-75283013 None:intergenic 40.0%
AGCTGGACTTTCAACCTTAA+TGG + chr8.3:75281776-75281795 MS.gene072281:CDS 40.0%
ATACCAGCTCTCTGAACATT+AGG - chr8.3:75281927-75281946 None:intergenic 40.0%
ATGCTACAGTATTCTTCTGG+AGG - chr8.3:75282094-75282113 None:intergenic 40.0%
ATGGAGTTATCTTTCACGCA+AGG + chr8.3:75281438-75281457 MS.gene072281:CDS 40.0%
CAACTGGATACTTCCATGTT+AGG - chr8.3:75282277-75282296 None:intergenic 40.0%
CATCGTTAGAAAAATGGACG+AGG + chr8.3:75280470-75280489 MS.gene072281:intron 40.0%
CCCTAAAGTAAAGACTAAGG+AGG - chr8.3:75280704-75280723 None:intergenic 40.0%
CGATGGAACTATGAAAGATG+GGG + chr8.3:75281462-75281481 MS.gene072281:CDS 40.0%
CGATGTATAAGGCAACAATC+TGG - chr8.3:75283533-75283552 None:intergenic 40.0%
CGATTTCAGTATGCCTAACA+TGG + chr8.3:75283038-75283057 MS.gene072281:CDS 40.0%
CTCTTGTAGTCCCAATATCT+TGG + chr8.3:75283174-75283193 MS.gene072281:intron 40.0%
CTTCTGTGTATGAGAGAACA+GGG - chr8.3:75282993-75283012 None:intergenic 40.0%
GATAAGGATACGGAGATACA+AGG + chr8.3:75280825-75280844 MS.gene072281:intron 40.0%
GCGAAGGAATGTTCATGAAT+AGG - chr8.3:75280315-75280334 None:intergenic 40.0%
GCTCTTATTCTGCTCCTAAA+TGG + chr8.3:75281646-75281665 MS.gene072281:CDS 40.0%
GGTCAATTCTGTAGACTTCA+AGG - chr8.3:75282379-75282398 None:intergenic 40.0%
GTCCTGCATCGTTAGAAAAA+TGG + chr8.3:75280464-75280483 MS.gene072281:intron 40.0%
GTCGATGGAACTATGAAAGA+TGG + chr8.3:75281460-75281479 MS.gene072281:CDS 40.0%
GTTCAGAGAATCTTACTCCA+TGG + chr8.3:75281727-75281746 MS.gene072281:CDS 40.0%
TACCGTCATACTTATCAGTC+TGG + chr8.3:75282946-75282965 MS.gene072281:intron 40.0%
TCAAGTCCTTGATTAGCATC+TGG - chr8.3:75282777-75282796 None:intergenic 40.0%
TGATCTCACAAGGAAATCTG+AGG - chr8.3:75282608-75282627 None:intergenic 40.0%
TGGAGTAATACAGAATGACG+AGG - chr8.3:75283951-75283970 None:intergenic 40.0%
TGGTCTCTGAGCTCAATATT+TGG + chr8.3:75281981-75282000 MS.gene072281:CDS 40.0%
! ACCAGTTGAGCAATGGATTT+AGG - chr8.3:75280357-75280376 None:intergenic 40.0%
! AGTTGCGTCACTAAGCTTTT+TGG - chr8.3:75281240-75281259 None:intergenic 40.0%
! CAAAGTATCATCAGGAGTGA+TGG + chr8.3:75282575-75282594 MS.gene072281:CDS 40.0%
! CCAGTTGAGCAATGGATTTA+GGG - chr8.3:75280356-75280375 None:intergenic 40.0%
! CCATTTGCGTTTGACACTTT+TGG + chr8.3:75281100-75281119 MS.gene072281:intron 40.0%
! CCCTCCTTAGTCTTTACTTT+AGG + chr8.3:75280700-75280719 MS.gene072281:intron 40.0%
! TGTCTAAGATTCATAGCTCC+CGG - chr8.3:75280797-75280816 None:intergenic 40.0%
! TTGCAGGAATTGCTGTTGTA+TGG + chr8.3:75283996-75284015 MS.gene072281:CDS 40.0%
!! CAGATACAGAAGTGTTGAGA+AGG + chr8.3:75282129-75282148 MS.gene072281:CDS 40.0%
!! CATGGAAGTATCCAGTTGTT+TGG + chr8.3:75282279-75282298 MS.gene072281:CDS 40.0%
!! CCAAAAGTGTCAAACGCAAA+TGG - chr8.3:75281103-75281122 None:intergenic 40.0%
!! GAAGTGTTGAGAAGGAATCT+TGG + chr8.3:75282137-75282156 MS.gene072281:CDS 40.0%
!! GATGCTTTTTGTGTGTGTGT+GGG - chr8.3:75283468-75283487 None:intergenic 40.0%
!! GTCCATTTTTCTAACGATGC+AGG - chr8.3:75280469-75280488 None:intergenic 40.0%
!! TGCTAAAGGTACTTCAAGGA+CGG + chr8.3:75283106-75283125 MS.gene072281:CDS 40.0%
AACACAACAGTCATGGACCT+AGG - chr8.3:75281196-75281215 None:intergenic 45.0%
AAGCATCAACCTGATGTGGA+GGG - chr8.3:75281557-75281576 None:intergenic 45.0%
AAGGAGGGACTAAGTCTAAG+AGG - chr8.3:75280688-75280707 None:intergenic 45.0%
AATTGTCTGTGAGGCTAAGG+AGG + chr8.3:75283885-75283904 MS.gene072281:CDS 45.0%
AGAACCTTACGATCGGGTAA+GGG - chr8.3:75280264-75280283 None:intergenic 45.0%
AGAACTGTTGGAGAGTCCAA+GGG + chr8.3:75280767-75280786 MS.gene072281:intron 45.0%
AGAAGAGACCTGACAGAGAA+TGG - chr8.3:75281596-75281615 None:intergenic 45.0%
AGAATCCTTGTTGGAGCAAG+AGG - chr8.3:75280153-75280172 None:intergenic 45.0%
AGTCCTTGATTAGCATCTGG+AGG - chr8.3:75282774-75282793 None:intergenic 45.0%
ATGTGCGAGAACCTTACGAT+CGG - chr8.3:75280271-75280290 None:intergenic 45.0%
ATTGGCTGCAATGAAGCTCT+TGG - chr8.3:75282400-75282419 None:intergenic 45.0%
CAAGGAAGGAGTTTCAACCA+TGG - chr8.3:75281747-75281766 None:intergenic 45.0%
CAATGTGGATGATTCCCATC+GGG + chr8.3:75280579-75280598 MS.gene072281:intron 45.0%
CAGAAAATTGCAAACCAGCG+TGG - chr8.3:75282833-75282852 None:intergenic 45.0%
CATCGTGAACACAACAGTCA+TGG - chr8.3:75281203-75281222 None:intergenic 45.0%
CCAATGTGGATGATTCCCAT+CGG + chr8.3:75280578-75280597 MS.gene072281:intron 45.0%
CCAGAATTTAACCCATCTGC+AGG - chr8.3:75281867-75281886 None:intergenic 45.0%
CCCTAAATCCATTGCTCAAC+TGG + chr8.3:75280353-75280372 MS.gene072281:CDS 45.0%
CTAGACCTCTCTCAACTTGT+AGG - chr8.3:75282055-75282074 None:intergenic 45.0%
GAAGAGACCTGACAGAGAAT+GGG - chr8.3:75281595-75281614 None:intergenic 45.0%
GTCCTTGATTAGCATCTGGA+GGG - chr8.3:75282773-75282792 None:intergenic 45.0%
TAAACCCTTACCCGATCGTA+AGG + chr8.3:75280257-75280276 MS.gene072281:CDS 45.0%
TACCCTCCAGATGCTAATCA+AGG + chr8.3:75282768-75282787 MS.gene072281:CDS 45.0%
TATCTTTCACGCAAGGTCGA+TGG + chr8.3:75281445-75281464 MS.gene072281:CDS 45.0%
TGGAACTATGAAAGATGGGG+CGG + chr8.3:75281465-75281484 MS.gene072281:CDS 45.0%
! ACCAACTTTTGGATCCCGAT+GGG - chr8.3:75280596-75280615 None:intergenic 45.0%
! CAATGGATTTAGGGAAGAGG+TGG - chr8.3:75280347-75280366 None:intergenic 45.0%
! CTTTTTGTGTGTGTGTGGGT+GGG - chr8.3:75283464-75283483 None:intergenic 45.0%
! GAGCAATGGATTTAGGGAAG+AGG - chr8.3:75280350-75280369 None:intergenic 45.0%
! GCGTCACTAAGCTTTTTGGA+TGG - chr8.3:75281236-75281255 None:intergenic 45.0%
! GTCTACCTACAAGTTGAGAG+AGG + chr8.3:75282047-75282066 MS.gene072281:CDS 45.0%
! TACCAACTTTTGGATCCCGA+TGG - chr8.3:75280597-75280616 None:intergenic 45.0%
! TATCAAGGGGAGGATGCTTT+TGG - chr8.3:75283412-75283431 None:intergenic 45.0%
! TTTTTGTGTGTGTGTGGGTG+GGG - chr8.3:75283463-75283482 None:intergenic 45.0%
!! ACAGCCGATTTGATCTCACA+AGG - chr8.3:75282618-75282637 None:intergenic 45.0%
!! CAAGAAGCATCAACCTGATG+TGG - chr8.3:75281561-75281580 None:intergenic 45.0%
!! CACATCAGGTTGATGCTTCT+TGG + chr8.3:75281559-75281578 MS.gene072281:CDS 45.0%
!! CCTGCAGATGGGTTAAATTC+TGG + chr8.3:75281864-75281883 MS.gene072281:CDS 45.0%
!! GCTAAAGGTACTTCAAGGAC+GGG + chr8.3:75283107-75283126 MS.gene072281:CDS 45.0%
!! GGATGCTTTTTGTGTGTGTG+TGG - chr8.3:75283469-75283488 None:intergenic 45.0%
!!! AGTTTAAATAAAATATATTT+TGG + chr8.3:75283635-75283654 MS.gene072281:intron 5.0%
AATTGGGGGGAGAGAACTGT+TGG + chr8.3:75280755-75280774 MS.gene072281:intron 50.0%
ACTGAAATCGGGAGTTGCCA+CGG - chr8.3:75283028-75283047 None:intergenic 50.0%
AGCCAAAATGCAAAGCCTCC+TGG + chr8.3:75281504-75281523 MS.gene072281:CDS 50.0%
ATTGAGCTCAGAGACCAGCT+TGG - chr8.3:75281978-75281997 None:intergenic 50.0%
CAGACACACCAGTTGAGCAA+TGG - chr8.3:75280364-75280383 None:intergenic 50.0%
CAGCCTAATGTTCAGAGAGC+TGG + chr8.3:75281921-75281940 MS.gene072281:CDS 50.0%
CCGATGGGAATCATCCACAT+TGG - chr8.3:75280581-75280600 None:intergenic 50.0%
CGACCCTATGAACCCTATGA+TGG + chr8.3:75283230-75283249 MS.gene072281:intron 50.0%
CTTCCTTGTCGAGACAAAGC+TGG + chr8.3:75281759-75281778 MS.gene072281:CDS 50.0%
CTTTGATGTCCCTCCACATC+AGG + chr8.3:75281545-75281564 MS.gene072281:CDS 50.0%
GAGAACCTTACGATCGGGTA+AGG - chr8.3:75280265-75280284 None:intergenic 50.0%
GAGAACTGTTGGAGAGTCCA+AGG + chr8.3:75280766-75280785 MS.gene072281:intron 50.0%
GAGGATGAGGATGATCGTTG+TGG - chr8.3:75283932-75283951 None:intergenic 50.0%
GCTGACTGAAACGCCCATTT+AGG - chr8.3:75281663-75281682 None:intergenic 50.0%
GGGTTCATAGGGTCGCTTAT+TGG - chr8.3:75283225-75283244 None:intergenic 50.0%
TCCCATCGGGATCCAAAAGT+TGG + chr8.3:75280592-75280611 MS.gene072281:intron 50.0%
TCTGAACAGACAGCTTCACG+CGG - chr8.3:75281714-75281733 None:intergenic 50.0%
TGGATTTAGGGAAGAGGTGG+TGG - chr8.3:75280344-75280363 None:intergenic 50.0%
TGTGCGAGAACCTTACGATC+GGG - chr8.3:75280270-75280289 None:intergenic 50.0%
! AAGGTACTTCAAGGACGGGT+TGG + chr8.3:75283111-75283130 MS.gene072281:CDS 50.0%
! AGAAGTTTTGCTCGTACCCG+TGG + chr8.3:75283008-75283027 MS.gene072281:CDS 50.0%
! AGTCCAGCTTTGTCTCGACA+AGG - chr8.3:75281765-75281784 None:intergenic 50.0%
! ATAGAAAGGTGCATGCGAGG+AGG - chr8.3:75282306-75282325 None:intergenic 50.0%
! CAGCTTTGTCTCGACAAGGA+AGG - chr8.3:75281761-75281780 None:intergenic 50.0%
! CTCCAGGAGGCTTTGCATTT+TGG - chr8.3:75281509-75281528 None:intergenic 50.0%
! GAAGCATCAACCTGATGTGG+AGG - chr8.3:75281558-75281577 None:intergenic 50.0%
! GCTTTTTGTGTGTGTGTGGG+TGG - chr8.3:75283465-75283484 None:intergenic 50.0%
! TGTATTTCTGCTCCTGCCCT+TGG + chr8.3:75283685-75283704 MS.gene072281:intron 50.0%
! TTTTGTGTGTGTGTGGGTGG+GGG - chr8.3:75283462-75283481 None:intergenic 50.0%
!! TGGATTGGTGTTGGATGACC+AGG + chr8.3:75281392-75281411 MS.gene072281:intron 50.0%
AAAGGAAGGAGACCAAGGGC+AGG - chr8.3:75283700-75283719 None:intergenic 55.0%
ACATCCAGAGCTCCTGCAGA+TGG + chr8.3:75281852-75281871 MS.gene072281:CDS 55.0%
ACTGCCCACAGTTCAACTCC+AGG - chr8.3:75281525-75281544 None:intergenic 55.0%
AGCCTCCTGGAGTTGAACTG+TGG + chr8.3:75281517-75281536 MS.gene072281:CDS 55.0%
AGCTCAGAGACCAGCTTGGT+TGG - chr8.3:75281974-75281993 None:intergenic 55.0%
AGCTTTCCTGACTTCCACGC+TGG + chr8.3:75282816-75282835 MS.gene072281:CDS 55.0%
CATCCAGAGCTCCTGCAGAT+GGG + chr8.3:75281853-75281872 MS.gene072281:CDS 55.0%
CGGTCGGATGCGGTTATCAA+GGG - chr8.3:75283426-75283445 None:intergenic 55.0%
CTGAAATCGGGAGTTGCCAC+GGG - chr8.3:75283027-75283046 None:intergenic 55.0%
GCCTCCTGGAGTTGAACTGT+GGG + chr8.3:75281518-75281537 MS.gene072281:CDS 55.0%
GGATGATCGTTGTGGTTGCG+TGG - chr8.3:75283924-75283943 None:intergenic 55.0%
GGTCGGATGCGGTTATCAAG+GGG - chr8.3:75283425-75283444 None:intergenic 55.0%
TAACCCATCTGCAGGAGCTC+TGG - chr8.3:75281859-75281878 None:intergenic 55.0%
TGCAAACCAGCGTGGAAGTC+AGG - chr8.3:75282825-75282844 None:intergenic 55.0%
TGCGAGGAGGACCAAACAAC+TGG - chr8.3:75282293-75282312 None:intergenic 55.0%
TGGGCGTTTCAGTCAGCCTT+AGG + chr8.3:75281666-75281685 MS.gene072281:CDS 55.0%
TTTGTGTGTGTGTGGGTGGG+GGG - chr8.3:75283461-75283480 None:intergenic 55.0%
! GGCATAGAAAGGTGCATGCG+AGG - chr8.3:75282309-75282328 None:intergenic 55.0%
!! TCAAGGACGGGTTGGAGATG+AGG + chr8.3:75283119-75283138 MS.gene072281:CDS 55.0%
CGGATGCGGTTATCAAGGGG+AGG - chr8.3:75283422-75283441 None:intergenic 60.0%
GCCCACAGTTCAACTCCAGG+AGG - chr8.3:75281522-75281541 None:intergenic 60.0%
GCGGTCGGATGCGGTTATCA+AGG - chr8.3:75283427-75283446 None:intergenic 60.0%
! GAGGTGGTGGTAACGTGCGA+AGG - chr8.3:75280331-75280350 None:intergenic 60.0%
! TGGAGAGTCCAAGGGAGTGC+CGG + chr8.3:75280775-75280794 MS.gene072281:intron 60.0%
CATAGCTCCCGGCACTCCCT+TGG - chr8.3:75280786-75280805 None:intergenic 65.0%
TGTGTGTGTGGGTGGGGGGA+GGG - chr8.3:75283457-75283476 None:intergenic 65.0%
!! GGAGAGTCCAAGGGAGTGCC+GGG + chr8.3:75280776-75280795 MS.gene072281:intron 65.0%
GTGTGTGTGTGGGTGGGGGG+AGG - chr8.3:75283458-75283477 None:intergenic 70.0%
TGTGTGGGTGGGGGGAGGGA+GGG - chr8.3:75283453-75283472 None:intergenic 70.0%
GGAGGGTGGGCGGTCGGATG+CGG - chr8.3:75283436-75283455 None:intergenic 75.0%
GTGTGTGGGTGGGGGGAGGG+AGG - chr8.3:75283454-75283473 None:intergenic 75.0%
TGGGTGGGGGGAGGGAGGGT+GGG - chr8.3:75283449-75283468 None:intergenic 75.0%
! GGGGAGGGAGGGTGGGCGGT+CGG - chr8.3:75283442-75283461 None:intergenic 80.0%
! GTGGGGGGAGGGAGGGTGGG+CGG - chr8.3:75283446-75283465 None:intergenic 80.0%
! GTGGGTGGGGGGAGGGAGGG+TGG - chr8.3:75283450-75283469 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 75280147 75284036 75280147 ID=MS.gene072281
chr8.3 mRNA 75280147 75284036 75280147 ID=MS.gene072281.t1;Parent=MS.gene072281
chr8.3 exon 75280147 75280374 75280147 ID=MS.gene072281.t1.exon1;Parent=MS.gene072281.t1
chr8.3 CDS 75280147 75280374 75280147 ID=cds.MS.gene072281.t1;Parent=MS.gene072281.t1
chr8.3 exon 75281414 75282360 75281414 ID=MS.gene072281.t1.exon2;Parent=MS.gene072281.t1
chr8.3 CDS 75281414 75282360 75281414 ID=cds.MS.gene072281.t1;Parent=MS.gene072281.t1
chr8.3 exon 75282404 75282659 75282404 ID=MS.gene072281.t1.exon3;Parent=MS.gene072281.t1
chr8.3 CDS 75282404 75282659 75282404 ID=cds.MS.gene072281.t1;Parent=MS.gene072281.t1
chr8.3 exon 75282747 75282893 75282747 ID=MS.gene072281.t1.exon4;Parent=MS.gene072281.t1
chr8.3 CDS 75282747 75282893 75282747 ID=cds.MS.gene072281.t1;Parent=MS.gene072281.t1
chr8.3 exon 75282982 75283162 75282982 ID=MS.gene072281.t1.exon5;Parent=MS.gene072281.t1
chr8.3 CDS 75282982 75283162 75282982 ID=cds.MS.gene072281.t1;Parent=MS.gene072281.t1
chr8.3 exon 75283846 75284036 75283846 ID=MS.gene072281.t1.exon6;Parent=MS.gene072281.t1
chr8.3 CDS 75283846 75284036 75283846 ID=cds.MS.gene072281.t1;Parent=MS.gene072281.t1
Gene Sequence

>MS.gene072281

ATGCCTCTTGCTCCAACAAGGATTCTCTCTCTTATTCTCTTTCTTCTGATCATTATTTCATCGTCTTCGGCAAAAGTAGTAAAAGAAGAATTTTCTGAGGAGTTGCTACTTAAACCCTTACCCGATCGTAAGGTTCTCGCACATTTTCACTTTCAAACCAAAGCTCCTATTCATGAACATTCCTTCGCACGTTACCACCACCTCTTCCCTAAATCCATTGCTCAACTGGTGTGTCTGCACTTTTCTCTTTTATAGTTAATTTTATTGTAGGGTTAACTATGTTATTAGTATCGTTGTGTAGCAAGTGTGACTTATAAGTCCTGCATCGTTAGAAAAATGGACGAGGTTGAATACTTTATAAGCGAAAGAACCAATAAACTCATTGTCTTTTAAAAGTGTGATGTCTTTCTCACGTGTATGATAATCTAAGTCCAATGTGGATGATTCCCATCGGGATCCAAAAGTTGGTAAAATTATCTTCAAGTTTGTTTTTGGTCTATATAGTCACTTTTTAGTTCTAAAAATTTCAAAACTGCATCCTCTTAGACTTAGTCCCTCCTTAGTCTTTACTTTAGGGACTAGTTTTGTAATTTGTAGGATTAACAAATAATTGGGGGGAGAGAACTGTTGGAGAGTCCAAGGGAGTGCCGGGAGCTATGAATCTTAGACACTTGATATGATAAGGATACGGAGATACAAGGAAATTTTTAAAATGCAAGACACGATACGGCTAAGATAATTTAGTATAAAAAAAAATTGAAAATGAAATTATATGAAAGCATGTTAGATTTTTCTCTGATAGAAACTTTAAAAACATCAAATGAAATCTGCTAGGGTAACAAGTATGTCAGATTTTTCCTTTAAGCAATTGTATCGCTTTGATCATTATTTTACAATATAGCAAAGGGAATAAACATGAGAAAGCATGTTGTGACAAACAACATGTTTTTATACCATTTGCGTTTGACACTTTTGGCTTTCTAGCACGAGAGATCATTGACCTTCTACATAGAGTTCAAATGGTCTTGCATAGCAATTTAATGTCTCCTAGGTCCATGACTGTTGTGTTCACGATGATTGGTTTTGCCATCCAAAAAGCTTAGTGACGCAACTTGTTGTCCGCTTACATTCCATTCATGTGTAATTTTCATGTATATATATAAAAAATAATATGAAAAAAATTGTTTCATTTTGCTATATTCTGACTTCTCAAAAAAAAAAATCCTGAATGTACTAATTAACATGTGGATTGGTGTTGGATGACCAGGTTAAAAAATATCACATTAAAGAAATGGAGTTATCTTTCACGCAAGGTCGATGGAACTATGAAAGATGGGGCGGATTTGATCCAATATCAAGCCAAAATGCAAAGCCTCCTGGAGTTGAACTGTGGGCAGTCTTTGATGTCCCTCCACATCAGGTTGATGCTTCTTGGAAAAATTTAACCCATTCTCTGTCAGGTCTCTTCTGTGCTTCAATAAACTTGCTAGAGTCTTCTAGCTCTTATTCTGCTCCTAAATGGGCGTTTCAGTCAGCCTTAGGTAGTTTAAGATATGGCACATTGCCGCGTGAAGCTGTCTGTTCAGAGAATCTTACTCCATGGTTGAAACTCCTTCCTTGTCGAGACAAAGCTGGACTTTCAACCTTAATGGATAGACCATCTATATACGGAAGCTTTTATCATTCACAGCGATTGCACTTGACAACATCCAGAGCTCCTGCAGATGGGTTAAATTCTGGAGTTATTCTAGAACAAACACTTACAGTTGTACTTCAGCCTAATGTTCAGAGAGCTGGTATGAGTTATCACGATGAACTAAAGATCCAACCAAGCTGGTCTCTGAGCTCAATATTTGGACAAAAAATCAATGAAAGATGTGTTCTTGCTAAATCGAGTAATGTCTACCTACAAGTTGAGAGAGGTCTAGTCTCTCAACTTGAGAACCTCCAGAAGAATACTGTAGCATATGCTGCTAATTACACAGATACAGAAGTGTTGAGAAGGAATCTTGGCTTTGATTTATCTATTATGCCAGATAAGATTCATAGAGAACTGGGAAAGAGCTCCACAATTCTGTATGAATATTCGATCAAAGGGTACAATGACACCGAACAATTTGATTTAGGCCTAACATGGAAGTATCCAGTTGTTTGGTCCTCCTCGCATGCACCTTTCTATGCCAGTAGATTTTTAATGGGAAGTGGAAATGAAGGGTTCGATTGCAATATCCTTGAAGTCTACAGAATTGACCAAGAGCTTCATTGCAGCCAATAATGTTGAAGAGAAGTGTAAGCTACAAGTTAATGTTCTACAAATTGTGCCTTGGTATATTAAGGTATACTATCATACCTTACAATTATTAGTAGATGGAAAGCCTCAAGTAGTCACAGATTTTATTGACAAAATGAGTGTTTCACCTTCTGAAGACAAAGTATCATCAGGAGTGATGGAGCTTATCCTCAGATTTCCTTGTGAGATCAAATCGGCTGTATTAAATATAGAGTTTGATAAGGTGTGTTTACATTCTTATTTTCATTTGTATTTCTTTTTCTTTTGGATATTTACCTCACTTTTGACATTCTTTTGTTGGTCTGCATAGGGCTTCTTGCACATTGATGAATACCCTCCAGATGCTAATCAAGGACTTGATATCCCATCAGCAATAATAAGCTTTCCTGACTTCCACGCTGGTTTGCAATTTTCTGATGACTCTATAAGCAAGTCGCCAATTCTGTCTAAATTACAGGTTATTTGAATCTCTGTTCTTGTTTTGCTCATAACCCCAGTAAATGTAAGATTACCGTCATACTTATCAGTCTGGATCTTTAATGTAGGAAAAGAGCCCTGTTCTCTCATACACAGAAGTTTTGCTCGTACCCGTGGCAACTCCCGATTTCAGTATGCCTAACATGGTCATTACAATTACTTGCATAGTTTTTGTATTGTATTTTGTATTTTTGCTAAAGGTACTTCAAGGACGGGTTGGAGATGAGGAAAGACTTTTGAAAAACAAAGGTAACTCTCGACTCTTGTAGTCCCAATATCTTGGGTTACAAGTAATTATATTGTGTATACCAATAAGCGACCCTATGAACCCTATGATGGTGTTTGATAGACAAGCTAGAACAGGACAAAACATGAGTTCTATTTTATACTGAGGCATATTGAAAGTATAACAGAACTATACCTAGTGTTACCATATATTTTGTTTCAGCTAAAAATGTGGAAAAAGCTGAACATAATCCCAATATGTCTTGAGTGCCAAAAGCATCCTCCCCTTGATAACCGCATCCGACCGCCCACCCTCCCTCCCCCCACCCACACACACACAAAAAGCATCCTCACCTCTTATGATTCACTTTATTCTCACTGTGTTAGTTTTCCAGATTGTTGCCTTATACATCGAATGATATATATATATACTATAATCTGTGGGAGTTTTTTTCGTAATGTTGATCCATGAATATGAATATCCTTGTAATTCTGAAGTTTAAATAAAATATATTTTGGTTTGGAATCCAAACTTTGATTGCTACATGTATTTCTGCTCCTGCCCTTGGTCTCCTTCCTTTTATTTTAGTATTCTTTCTCATGTTTATAGTATTAAAAAAAAATGCATGGTATGAGCCGTATAGCTTTAGTTTCCATGTCTTTTATTCGTACTCAGCTTCTGATAAATTGCATTTTTCTGCTTGTAGTTGCAAAAAAAGTTGCGTTCCTTTGTCGAGCACTAAATAAATTGTCTGTGAGGCTAAGGAGGAGATCATCAGAGTCCACGCAACCACAACGATCATCCTCATCCTCGTCATTCTGTATTACTCCAAAATTGATTCTTAAATTACAATTGGTTGCAGGAATTGCTGTTGTATGGCAATATTTCTTGAAATGA

Protein sequence

>MS.gene072281.t1

MPLAPTRILSLILFLLIIISSSSAKVVKEEFSEELLLKPLPDRKVLAHFHFQTKAPIHEHSFARYHHLFPKSIAQLVKKYHIKEMELSFTQGRWNYERWGGFDPISSQNAKPPGVELWAVFDVPPHQVDASWKNLTHSLSGLFCASINLLESSSSYSAPKWAFQSALGSLRYGTLPREAVCSENLTPWLKLLPCRDKAGLSTLMDRPSIYGSFYHSQRLHLTTSRAPADGLNSGVILEQTLTVVLQPNVQRAGMSYHDELKIQPSWSLSSIFGQKINERCVLAKSSNVYLQVERGLVSQLENLQKNTVAYAANYTDTEVLRRNLGFDLSIMPDKIHRELGKSSTILYEYSIKGYNDTEQFDLGLTWKYPVVWSSSHAPFYASRFLMGSGNEGFIAANNVEEKCKLQVNVLQIVPWYIKVYYHTLQLLVDGKPQVVTDFIDKMSVSPSEDKVSSGVMELILRFPCEIKSAVLNIEFDKGFLHIDEYPPDANQGLDIPSAIISFPDFHAGLQFSDDSISKSPILSKLQEKSPVLSYTEVLLVPVATPDFSMPNMVITITCIVFVLYFVFLLKVLQGRVGDEERLLKNKVAKKVAFLCRALNKLSVRLRRRSSESTQPQRSSSSSSFCITPKLILKLQLVAGIAVVWQYFLK