Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072429.t1 | XP_013467265.1 | 83 | 582 | 93 | 4 | 1 | 581 | 1 | 577 | 3.80E-274 | 953.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072429.t1 | Q5XQC7 | 68.0 | 581 | 175 | 5 | 1 | 572 | 1 | 579 | 9.7e-226 | 784.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072429.t1 | A0A072VGY2 | 83.0 | 582 | 93 | 4 | 1 | 581 | 1 | 577 | 2.8e-274 | 953.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene000424 | MS.gene072429 | PPI |
| MS.gene072429 | MS.gene70112 | PPI |
| MS.gene030511 | MS.gene072429 | PPI |
| MS.gene072429 | MS.gene49772 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072429.t1 | MTR_1g048160 | 82.990 | 582 | 93 | 4 | 1 | 581 | 1 | 577 | 0.0 | 997 |
| MS.gene072429.t1 | MTR_7g114130 | 82.222 | 585 | 98 | 4 | 1 | 582 | 1 | 582 | 0.0 | 991 |
| MS.gene072429.t1 | MTR_7g114100 | 82.189 | 466 | 30 | 4 | 120 | 585 | 6 | 418 | 0.0 | 749 |
| MS.gene072429.t1 | MTR_8g096190 | 59.931 | 579 | 222 | 7 | 1 | 571 | 1 | 577 | 0.0 | 699 |
| MS.gene072429.t1 | MTR_8g096190 | 59.091 | 550 | 215 | 7 | 1 | 542 | 1 | 548 | 0.0 | 652 |
| MS.gene072429.t1 | MTR_8g096190 | 57.854 | 522 | 210 | 7 | 1 | 514 | 1 | 520 | 0.0 | 604 |
| MS.gene072429.t1 | MTR_7g033100 | 30.924 | 249 | 128 | 8 | 335 | 560 | 107 | 334 | 2.02e-22 | 100 |
| MS.gene072429.t1 | MTR_7g033100 | 30.924 | 249 | 128 | 8 | 335 | 560 | 107 | 334 | 3.79e-22 | 99.4 |
| MS.gene072429.t1 | MTR_3g086520 | 32.129 | 249 | 125 | 9 | 335 | 560 | 125 | 352 | 7.10e-21 | 96.3 |
| MS.gene072429.t1 | MTR_3g086520 | 32.129 | 249 | 125 | 9 | 335 | 560 | 125 | 352 | 7.50e-21 | 96.3 |
| MS.gene072429.t1 | MTR_3g086520 | 32.129 | 249 | 125 | 9 | 335 | 560 | 122 | 349 | 7.90e-21 | 96.3 |
| MS.gene072429.t1 | MTR_3g075530 | 30.249 | 281 | 138 | 13 | 329 | 573 | 88 | 346 | 1.95e-20 | 94.7 |
| MS.gene072429.t1 | MTR_3g096520 | 31.111 | 270 | 136 | 10 | 320 | 560 | 87 | 335 | 3.60e-20 | 94.0 |
| MS.gene072429.t1 | MTR_3g096520 | 31.111 | 270 | 136 | 10 | 320 | 560 | 87 | 335 | 3.83e-20 | 93.6 |
| MS.gene072429.t1 | MTR_3g096520 | 31.111 | 270 | 136 | 10 | 320 | 560 | 104 | 352 | 4.25e-20 | 94.0 |
| MS.gene072429.t1 | MTR_8g089670 | 30.522 | 249 | 129 | 8 | 335 | 560 | 132 | 359 | 7.77e-20 | 93.2 |
| MS.gene072429.t1 | MTR_6g021730 | 30.120 | 249 | 130 | 8 | 335 | 560 | 127 | 354 | 1.19e-19 | 92.8 |
| MS.gene072429.t1 | MTR_8g447220 | 29.437 | 231 | 122 | 7 | 335 | 547 | 80 | 287 | 1.16e-18 | 87.8 |
| MS.gene072429.t1 | MTR_8g447220 | 29.437 | 231 | 122 | 7 | 335 | 547 | 80 | 287 | 1.80e-18 | 88.2 |
| MS.gene072429.t1 | MTR_2g063843 | 28.309 | 272 | 140 | 10 | 335 | 574 | 87 | 335 | 2.05e-18 | 88.2 |
| MS.gene072429.t1 | MTR_6g092020 | 27.941 | 272 | 141 | 9 | 335 | 574 | 74 | 322 | 3.76e-18 | 87.4 |
| MS.gene072429.t1 | MTR_6g092100 | 31.282 | 195 | 106 | 5 | 335 | 513 | 29 | 211 | 1.21e-17 | 84.3 |
| MS.gene072429.t1 | MTR_2g063857 | 27.636 | 275 | 141 | 9 | 335 | 574 | 95 | 346 | 2.30e-17 | 85.1 |
| MS.gene072429.t1 | MTR_2g063907 | 27.692 | 260 | 140 | 8 | 335 | 569 | 81 | 317 | 2.68e-17 | 84.7 |
| MS.gene072429.t1 | MTR_2g063857 | 27.636 | 275 | 141 | 9 | 335 | 574 | 95 | 346 | 3.46e-17 | 84.0 |
| MS.gene072429.t1 | MTR_7g081170 | 27.439 | 164 | 100 | 4 | 364 | 518 | 85 | 238 | 6.15e-13 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072429.t1 | AT1G08860 | 67.986 | 581 | 175 | 5 | 1 | 572 | 1 | 579 | 0.0 | 821 |
| MS.gene072429.t1 | AT5G61910 | 59.483 | 580 | 225 | 6 | 1 | 573 | 769 | 1345 | 0.0 | 697 |
| MS.gene072429.t1 | AT5G61900 | 59.483 | 580 | 225 | 6 | 1 | 573 | 1 | 577 | 0.0 | 693 |
| MS.gene072429.t1 | AT5G61900 | 59.483 | 580 | 225 | 6 | 1 | 573 | 1 | 577 | 0.0 | 693 |
| MS.gene072429.t1 | AT5G07300 | 57.168 | 579 | 235 | 7 | 1 | 569 | 1 | 576 | 0.0 | 667 |
| MS.gene072429.t1 | AT1G67800 | 31.325 | 249 | 127 | 8 | 335 | 560 | 113 | 340 | 6.82e-22 | 99.4 |
| MS.gene072429.t1 | AT1G67800 | 31.325 | 249 | 127 | 8 | 335 | 560 | 93 | 320 | 6.93e-22 | 99.0 |
| MS.gene072429.t1 | AT1G67800 | 31.325 | 249 | 127 | 8 | 335 | 560 | 93 | 320 | 6.93e-22 | 99.0 |
| MS.gene072429.t1 | AT1G67800 | 31.325 | 249 | 127 | 8 | 335 | 560 | 93 | 320 | 6.93e-22 | 99.0 |
| MS.gene072429.t1 | AT1G67800 | 31.325 | 249 | 127 | 8 | 335 | 560 | 93 | 320 | 6.93e-22 | 99.0 |
| MS.gene072429.t1 | AT1G67800 | 31.325 | 249 | 127 | 8 | 335 | 560 | 113 | 340 | 9.13e-22 | 98.2 |
| MS.gene072429.t1 | AT3G01650 | 30.924 | 249 | 128 | 8 | 335 | 560 | 156 | 383 | 3.85e-21 | 97.4 |
| MS.gene072429.t1 | AT3G01650 | 30.924 | 249 | 128 | 8 | 335 | 560 | 156 | 383 | 3.85e-21 | 97.4 |
| MS.gene072429.t1 | AT5G63970 | 29.897 | 291 | 151 | 12 | 320 | 579 | 16 | 284 | 6.65e-20 | 92.0 |
| MS.gene072429.t1 | AT5G63970 | 29.897 | 291 | 151 | 12 | 320 | 579 | 16 | 284 | 6.65e-20 | 92.0 |
| MS.gene072429.t1 | AT5G14420 | 30.418 | 263 | 132 | 11 | 335 | 568 | 122 | 362 | 9.95e-20 | 92.8 |
| MS.gene072429.t1 | AT5G14420 | 30.418 | 263 | 132 | 11 | 335 | 568 | 122 | 362 | 9.95e-20 | 92.8 |
| MS.gene072429.t1 | AT5G14420 | 30.418 | 263 | 132 | 11 | 335 | 568 | 122 | 362 | 9.95e-20 | 92.8 |
| MS.gene072429.t1 | AT5G14420 | 30.418 | 263 | 132 | 11 | 335 | 568 | 122 | 362 | 9.95e-20 | 92.8 |
| MS.gene072429.t1 | AT1G79380 | 28.520 | 277 | 148 | 11 | 320 | 567 | 58 | 313 | 4.45e-19 | 90.1 |
Find 116 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATCAGGACCCACTTTATT+TGG | 0.129342 | 7.3:+2864459 | MS.gene072429:CDS |
| CTCTGTTGTGCAAGCTCTTC+TGG | 0.158420 | 7.3:+2865206 | MS.gene072429:CDS |
| AGACAAACTGGTTTCCATTT+TGG | 0.164153 | 7.3:-2862618 | None:intergenic |
| TTGTAAAATCTAATGAAATT+TGG | 0.204437 | 7.3:-2865313 | None:intergenic |
| AGCAAGTAACTTGCTTGATA+TGG | 0.244073 | 7.3:+2861036 | MS.gene072429:CDS |
| CGGTTTCCTGCTTGGGGATT+TGG | 0.252676 | 7.3:+2864129 | MS.gene072429:CDS |
| AGATGGGAAATTTGAAGAAT+TGG | 0.254232 | 7.3:+2861238 | MS.gene072429:CDS |
| TGATAAGCGGTTTCCTGCTT+GGG | 0.290897 | 7.3:+2864122 | MS.gene072429:CDS |
| TGTGCAGCCAAGTTTATAAC+TGG | 0.295273 | 7.3:-2864483 | None:intergenic |
| CTTCTCTTGTCCTTTACGTT+TGG | 0.316488 | 7.3:-2863174 | None:intergenic |
| GATGGGAAATTTGAAGAATT+GGG | 0.319368 | 7.3:+2861239 | MS.gene072429:CDS |
| TTACGTAGTGTGACTCTATC+AGG | 0.343328 | 7.3:+2864444 | MS.gene072429:CDS |
| ATAACAATTTAAATCCAAAA+TGG | 0.353940 | 7.3:+2862604 | MS.gene072429:CDS |
| ATTTGGATGCTTGTGGGAAA+TGG | 0.360681 | 7.3:-2865296 | None:intergenic |
| CTGCAAGATCAAGATTTCAT+TGG | 0.370990 | 7.3:+2861943 | MS.gene072429:CDS |
| TCAAAACACTCGATAACTAA+TGG | 0.374983 | 7.3:-2862953 | None:intergenic |
| ATAACTTCAGTCTTGCAAAT+AGG | 0.376188 | 7.3:-2862579 | None:intergenic |
| ATGCTTGTGGGAAATGGGAT+TGG | 0.380235 | 7.3:-2865290 | None:intergenic |
| TGCTGGAAATTAAGACAAAC+TGG | 0.380449 | 7.3:-2862630 | None:intergenic |
| CTGATAAGCGGTTTCCTGCT+TGG | 0.381905 | 7.3:+2864121 | MS.gene072429:CDS |
| AATCATGTTCGAAGAAATCT+TGG | 0.386088 | 7.3:+2862133 | MS.gene072429:CDS |
| CTGAAGAGACTGTTGCTTCA+AGG | 0.393400 | 7.3:+2862173 | MS.gene072429:CDS |
| TTTGGATGCTTGTGGGAAAT+GGG | 0.396015 | 7.3:-2865295 | None:intergenic |
| TGCTTGTGGGAAATGGGATT+GGG | 0.401782 | 7.3:-2865289 | None:intergenic |
| TGTCTTAATTTCCAGCAGTT+TGG | 0.404098 | 7.3:+2862636 | MS.gene072429:CDS |
| TGGATTTGAACTGAACTTCA+TGG | 0.405252 | 7.3:+2863271 | MS.gene072429:CDS |
| TCTGTTGCTTTGAAGCCTTA+AGG | 0.409700 | 7.3:-2862107 | None:intergenic |
| GGTTAAGCTCCGGCTTGGTT+TGG | 0.413516 | 7.3:-2862086 | None:intergenic |
| TTGCATTACATTGACGTATC+CGG | 0.413811 | 7.3:+2863428 | MS.gene072429:CDS |
| AGCGGCAATCATGTACTTAT+CGG | 0.415633 | 7.3:+2862986 | MS.gene072429:CDS |
| TATAAACTTGGCTGCACAAA+TGG | 0.416011 | 7.3:+2864488 | MS.gene072429:CDS |
| AAAATTTGTGTAGGCTATGA+TGG | 0.427229 | 7.3:+2864068 | MS.gene072429:intron |
| GGAAGGAATTGAAGGCATAA+TGG | 0.437267 | 7.3:+2864404 | MS.gene072429:CDS |
| TCTAAAGGGTCAACTCTTTG+TGG | 0.437821 | 7.3:+2863199 | MS.gene072429:CDS |
| CAAGCCGGAGCTTAACCTTA+AGG | 0.437855 | 7.3:+2862092 | MS.gene072429:CDS |
| TATAACTGGGCCAAATAAAG+TGG | 0.438129 | 7.3:-2864469 | None:intergenic |
| CTCATAGGATGGAATTGTTA+CGG | 0.441728 | 7.3:+2864680 | MS.gene072429:intron |
| GCCATTGTTCACACAAATTG+AGG | 0.443188 | 7.3:+2859603 | MS.gene072429:CDS |
| TTACTTTACTTCCAAACTGC+TGG | 0.443289 | 7.3:-2862647 | None:intergenic |
| CTTACTTTGTACTTCTCTCA+TGG | 0.444065 | 7.3:-2864976 | None:intergenic |
| TATCTTCCGTTGTTCTCGCT+TGG | 0.449110 | 7.3:+2862210 | MS.gene072429:CDS |
| ATTTGGCCCAGTTATAAACT+TGG | 0.451486 | 7.3:+2864476 | MS.gene072429:CDS |
| AACAGTCTCTTCAGCATGAA+TGG | 0.456759 | 7.3:-2862164 | None:intergenic |
| ATTCTTGATATCCTTAGAAA+AGG | 0.456825 | 7.3:-2862534 | None:intergenic |
| GTTTAGGTGGAAGGAATTGA+AGG | 0.464131 | 7.3:+2864396 | MS.gene072429:intron |
| TTTCCTGCTTGGGGATTTGG+AGG | 0.464729 | 7.3:+2864132 | MS.gene072429:CDS |
| CGAATTGTTTGAATCCAGAA+TGG | 0.467226 | 7.3:+2861279 | MS.gene072429:CDS |
| GGACAAGAGAAGGTTCTAAA+GGG | 0.468659 | 7.3:+2863185 | MS.gene072429:CDS |
| TTACTTTGTACTTCTCTCAT+GGG | 0.469535 | 7.3:-2864975 | None:intergenic |
| TCTTGTCCTTTACGTTTGGA+TGG | 0.470396 | 7.3:-2863170 | None:intergenic |
| GATTTCTTCTACACTTCTCA+AGG | 0.473447 | 7.3:+2859574 | MS.gene072429:CDS |
| AATCTGAATGGAGGAGCTCC+AGG | 0.473846 | 7.3:+2864189 | MS.gene072429:CDS |
| CCCCTATCGATACTTATAGT+TGG | 0.474223 | 7.3:+2864747 | MS.gene072429:CDS |
| GACCTCTGATAAATTGCAAC+TGG | 0.474996 | 7.3:-2861971 | None:intergenic |
| AGGACAAGAGAAGGTTCTAA+AGG | 0.477000 | 7.3:+2863184 | MS.gene072429:CDS |
| AAATGGGATTGGGAAGGAAG+TGG | 0.478749 | 7.3:-2865279 | None:intergenic |
| TCGGTTAAATTCATACCAAA+AGG | 0.481359 | 7.3:+2863451 | MS.gene072429:CDS |
| TGTGGACCAATATTGTGAAA+AGG | 0.484588 | 7.3:+2863217 | MS.gene072429:CDS |
| TCGATACTTATAGTTGGTGT+TGG | 0.485807 | 7.3:+2864753 | MS.gene072429:CDS |
| GACATTGACACAACATATCA+TGG | 0.486664 | 7.3:+2861495 | MS.gene072429:CDS |
| AATGAAATTTGGATGCTTGT+GGG | 0.487108 | 7.3:-2865302 | None:intergenic |
| CTTAAGGTTAAGCTCCGGCT+TGG | 0.500067 | 7.3:-2862091 | None:intergenic |
| AGATATAAAAGGAGCGAAAG+AGG | 0.501659 | 7.3:+2859501 | MS.gene072429:CDS |
| AGTTGGAGGTGTTAATCAAA+AGG | 0.506205 | 7.3:+2859525 | MS.gene072429:CDS |
| GGTAAACAAACAAACCTTAG+TGG | 0.511032 | 7.3:-2861523 | None:intergenic |
| ATATCATGGCGTTTCCACTA+AGG | 0.515260 | 7.3:+2861509 | MS.gene072429:CDS |
| AAGCTATGCAATGAGAGAAA+AGG | 0.515589 | 7.3:+2863131 | MS.gene072429:CDS |
| ATATCAAGAATGGTTGAGAG+TGG | 0.517903 | 7.3:+2862546 | MS.gene072429:CDS |
| GCGGCAATCATGTACTTATC+GGG | 0.518457 | 7.3:+2862987 | MS.gene072429:CDS |
| ACCAACTATAAGTATCGATA+GGG | 0.518580 | 7.3:-2864748 | None:intergenic |
| TAGAGCTGTTATATGATGAA+AGG | 0.527003 | 7.3:-2864521 | None:intergenic |
| TAATGAAATTTGGATGCTTG+TGG | 0.527845 | 7.3:-2865303 | None:intergenic |
| TTTGCATATAGAACAAGCAT+AGG | 0.532715 | 7.3:-2861212 | None:intergenic |
| GTGTAGGCTATGATGGAGGT+TGG | 0.542603 | 7.3:+2864075 | MS.gene072429:intron |
| TCTCACACCTCAGAGCTACC+TGG | 0.544187 | 7.3:-2864207 | None:intergenic |
| AGAGCTGTTATATGATGAAA+GGG | 0.545080 | 7.3:-2864520 | None:intergenic |
| TTTATTGATTACATATCTAG+TGG | 0.548275 | 7.3:+2863251 | MS.gene072429:CDS |
| GTCATGCCATCCAAACGTAA+AGG | 0.551066 | 7.3:+2863164 | MS.gene072429:CDS |
| CAGGTACTGGATGCTGATAA+CGG | 0.552619 | 7.3:+2864894 | MS.gene072429:intron |
| CTATGTATTGCTTATCATAA+CGG | 0.553373 | 7.3:+2864548 | MS.gene072429:CDS |
| GTGCAGCCAAGTTTATAACT+GGG | 0.557398 | 7.3:-2864482 | None:intergenic |
| TTGGTATGAATTTAACCGAC+CGG | 0.559167 | 7.3:-2863447 | None:intergenic |
| AGCCGCTGATTTCACCAGCA+TGG | 0.560772 | 7.3:+2864776 | MS.gene072429:CDS |
| GATAAGCGGTTTCCTGCTTG+GGG | 0.560782 | 7.3:+2864123 | MS.gene072429:CDS |
| ATGGTTGCAATAGATTTCAC+CGG | 0.562610 | 7.3:+2863290 | MS.gene072429:CDS |
| TTTCCTCCAAATCCCCAAGC+AGG | 0.578468 | 7.3:-2864135 | None:intergenic |
| TACTTTGTACTTCTCTCATG+GGG | 0.583824 | 7.3:-2864974 | None:intergenic |
| AAAGGAGCGAAAGAGGCAGT+TGG | 0.584250 | 7.3:+2859508 | MS.gene072429:CDS |
| GGAGCGAAAGAGGCAGTTGG+AGG | 0.585023 | 7.3:+2859511 | MS.gene072429:CDS |
| TGATATGGACATTACATCAA+AGG | 0.585879 | 7.3:+2861051 | MS.gene072429:CDS |
| ATAGAATAGAATAGAATGGG+AGG | 0.587536 | 7.3:+2859469 | None:intergenic |
| CACCAACTATAAGTATCGAT+AGG | 0.590609 | 7.3:-2864749 | None:intergenic |
| AAATGGAGATCCTCAAAAGT+CGG | 0.595097 | 7.3:+2863400 | MS.gene072429:CDS |
| AAGGATATAGACCTCCATGC+TGG | 0.598606 | 7.3:-2864790 | None:intergenic |
| AGATCAAGATTTCATTGGAG+AGG | 0.599179 | 7.3:+2861948 | MS.gene072429:CDS |
| AGTTCTATGATTCTGATAAG+CGG | 0.602034 | 7.3:+2864109 | MS.gene072429:CDS |
| GAAGCCTTAAGGTTAAGCTC+CGG | 0.603390 | 7.3:-2862096 | None:intergenic |
| CAAACGTAAAGGACAAGAGA+AGG | 0.609536 | 7.3:+2863175 | MS.gene072429:CDS |
| ACCTCAATTTGTGTGAACAA+TGG | 0.612254 | 7.3:-2859604 | None:intergenic |
| AGATAGTGACCAAACCAAGC+CGG | 0.622761 | 7.3:+2862077 | MS.gene072429:intron |
| GGCCAGTTGCAATTTATCAG+AGG | 0.625547 | 7.3:+2861969 | MS.gene072429:CDS |
| TAGAATAGAATAGAATGGGA+GGG | 0.632465 | 7.3:+2859470 | None:intergenic |
| ATAACTGGGCCAAATAAAGT+GGG | 0.634735 | 7.3:-2864468 | None:intergenic |
| TGTGGGAAATGGGATTGGGA+AGG | 0.635038 | 7.3:-2865285 | None:intergenic |
| TGAAGGATAGCTTACACAAG+TGG | 0.638687 | 7.3:-2861344 | None:intergenic |
| TCAAGAATGGTTGAGAGTGG+AGG | 0.644600 | 7.3:+2862549 | MS.gene072429:CDS |
| CGCTGATTTCACCAGCATGG+AGG | 0.669024 | 7.3:+2864779 | MS.gene072429:CDS |
| AACAAACAACAACAATGATG+CGG | 0.669599 | 7.3:+2859549 | MS.gene072429:CDS |
| CCAACTATAAGTATCGATAG+GGG | 0.681755 | 7.3:-2864747 | None:intergenic |
| TGTTATCCAAGCGAGAACAA+CGG | 0.691289 | 7.3:-2862216 | None:intergenic |
| GGATTTGGAGGAAATGTACA+CGG | 0.693954 | 7.3:+2864144 | MS.gene072429:CDS |
| ATTTGTGTAGGCTATGATGG+AGG | 0.697109 | 7.3:+2864071 | MS.gene072429:intron |
| AGGAGCTCCAGGTAGCTCTG+AGG | 0.713821 | 7.3:+2864200 | MS.gene072429:CDS |
| CTCCATGCTGGTGAAATCAG+CGG | 0.720055 | 7.3:-2864778 | None:intergenic |
| ATTACATTGACGTATCCGGT+CGG | 0.743729 | 7.3:+2863432 | MS.gene072429:CDS |
| TTTGGAGGAAATGTACACGG+TGG | 0.802767 | 7.3:+2864147 | MS.gene072429:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAATTATTTTTAAAAAAT+TGG | + | chr7.3:2863652-2863671 | MS.gene072429:intron | 0.0% |
| !! | AATAGAGATAAAATTAAAAA+GGG | - | chr7.3:2864309-2864328 | None:intergenic | 10.0% |
| !! | CTAAAATTATGAAAAAAAAA+CGG | - | chr7.3:2861186-2861205 | None:intergenic | 10.0% |
| !! | GTAAAAATATTTAAAAGATA+AGG | + | chr7.3:2860562-2860581 | MS.gene072429:intron | 10.0% |
| !! | TAATAGAGATAAAATTAAAA+AGG | - | chr7.3:2864310-2864329 | None:intergenic | 10.0% |
| !!! | TACTAAATGTTTTTTTTTTA+CGG | + | chr7.3:2860219-2860238 | MS.gene072429:intron | 10.0% |
| !!! | TTAGTATTGATTTTATTATT+TGG | - | chr7.3:2860205-2860224 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAGAAACTAC+AGG | - | chr7.3:2859722-2859741 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAGAAACTACA+GGG | - | chr7.3:2859721-2859740 | None:intergenic | 15.0% |
| !! | AAAACAAAACAAAAAAATAG+TGG | + | chr7.3:2860699-2860718 | MS.gene072429:intron | 15.0% |
| !! | AACAAAAAATTTATACTTAC+AGG | - | chr7.3:2862467-2862486 | None:intergenic | 15.0% |
| !! | AAGTCAAAATATCAATTAAA+TGG | + | chr7.3:2860353-2860372 | MS.gene072429:intron | 15.0% |
| !! | ATAACAATTTAAATCCAAAA+TGG | + | chr7.3:2862604-2862623 | MS.gene072429:CDS | 15.0% |
| !! | TTTACTTTACATATTTAACA+TGG | + | chr7.3:2865119-2865138 | MS.gene072429:intron | 15.0% |
| !! | TTTATAGTCATAAAATTGAT+TGG | - | chr7.3:2862369-2862388 | None:intergenic | 15.0% |
| !!! | AATATACTATTTGTTATTGT+TGG | + | chr7.3:2860947-2860966 | MS.gene072429:intron | 15.0% |
| !!! | ATAGTTTTTTTGTTTTGTTT+AGG | + | chr7.3:2864380-2864399 | MS.gene072429:intron | 15.0% |
| !!! | ATTATTCCTGATATTTTTTT+AGG | + | chr7.3:2863571-2863590 | MS.gene072429:intron | 15.0% |
| !!! | CAAATTTTACAATGTTTATT+AGG | - | chr7.3:2864056-2864075 | None:intergenic | 15.0% |
| !!! | CTTAAATAGTTTTATAATGA+CGG | - | chr7.3:2862753-2862772 | None:intergenic | 15.0% |
| !!! | TATTGAAATTTTTGAAAACT+TGG | - | chr7.3:2862915-2862934 | None:intergenic | 15.0% |
| !! | AAAAAATACTAGTGATTACT+AGG | - | chr7.3:2863757-2863776 | None:intergenic | 20.0% |
| !! | AAAAAGAACACTATTTATGT+AGG | - | chr7.3:2861380-2861399 | None:intergenic | 20.0% |
| !! | AAAAATACTAGTGATTACTA+GGG | - | chr7.3:2863756-2863775 | None:intergenic | 20.0% |
| !! | AAACATTGTAAAATTTGTGT+AGG | + | chr7.3:2864059-2864078 | MS.gene072429:intron | 20.0% |
| !! | AAATTGTACTATATCTCTAA+GGG | - | chr7.3:2865067-2865086 | None:intergenic | 20.0% |
| !! | AATGTCTGTAAAAATAGAAT+TGG | - | chr7.3:2859649-2859668 | None:intergenic | 20.0% |
| !! | ATAGATTCAAAAATCAATTC+TGG | - | chr7.3:2860038-2860057 | None:intergenic | 20.0% |
| !! | ATGTCTGTAAAAATAGAATT+GGG | - | chr7.3:2859648-2859667 | None:intergenic | 20.0% |
| !! | GTCTAATGTTAAATCATATA+TGG | + | chr7.3:2862694-2862713 | MS.gene072429:intron | 20.0% |
| !! | TAAAAAGATGTGTTTAGATA+CGG | + | chr7.3:2860076-2860095 | MS.gene072429:intron | 20.0% |
| !! | TGAAAGACAGAATTATTATA+AGG | - | chr7.3:2861551-2861570 | None:intergenic | 20.0% |
| !! | TGCAATAATGAGAAATATTT+GGG | - | chr7.3:2862031-2862050 | None:intergenic | 20.0% |
| !! | TTCTATATGCAAAAAAAGAT+GGG | + | chr7.3:2861222-2861241 | MS.gene072429:CDS | 20.0% |
| !! | TTGCAATAATGAGAAATATT+TGG | - | chr7.3:2862032-2862051 | None:intergenic | 20.0% |
| !! | TTTAATTACTTTCTCATGTA+AGG | + | chr7.3:2862876-2862895 | MS.gene072429:intron | 20.0% |
| !! | TTTGCAATAAAAACTGTTTA+TGG | + | chr7.3:2861596-2861615 | MS.gene072429:intron | 20.0% |
| !!! | ATTCAGAAAGTATTTATCTT+TGG | + | chr7.3:2862824-2862843 | MS.gene072429:intron | 20.0% |
| !!! | TTAATTTTTTCTATCCATTC+TGG | - | chr7.3:2861296-2861315 | None:intergenic | 20.0% |
| !!! | TTTATTGATTACATATCTAG+TGG | + | chr7.3:2863251-2863270 | MS.gene072429:CDS | 20.0% |
| ! | AAAAGAAGTTAAAACGATGT+AGG | - | chr7.3:2863605-2863624 | None:intergenic | 25.0% |
| ! | AAAGAAGTTAAAACGATGTA+GGG | - | chr7.3:2863604-2863623 | None:intergenic | 25.0% |
| ! | AACACTATTTATGTAGGAAT+AGG | - | chr7.3:2861374-2861393 | None:intergenic | 25.0% |
| ! | AACTTAGTCCTTAAAATTGT+AGG | + | chr7.3:2861650-2861669 | MS.gene072429:intron | 25.0% |
| ! | AATTTCAATAACTTCTATGC+AGG | + | chr7.3:2862925-2862944 | MS.gene072429:intron | 25.0% |
| ! | ACTACTAGATTAACTTTGTA+GGG | - | chr7.3:2861902-2861921 | None:intergenic | 25.0% |
| ! | ACTTAGAACTATAATGATGT+TGG | - | chr7.3:2863802-2863821 | None:intergenic | 25.0% |
| ! | AGACAGAATTATTATAAGGT+TGG | - | chr7.3:2861547-2861566 | None:intergenic | 25.0% |
| ! | AGTAATCTTTGATCACTTAA+AGG | - | chr7.3:2860393-2860412 | None:intergenic | 25.0% |
| ! | AGTATTTATCTTTGGATTGT+CGG | + | chr7.3:2862832-2862851 | MS.gene072429:intron | 25.0% |
| ! | ATCTGAAAGAAAGCAAAATA+AGG | - | chr7.3:2861464-2861483 | None:intergenic | 25.0% |
| ! | ATCTGTCAATGTATGTTAAA+CGG | + | chr7.3:2860480-2860499 | MS.gene072429:intron | 25.0% |
| ! | ATGCTAAGGAAATTAAAGAA+AGG | - | chr7.3:2864812-2864831 | None:intergenic | 25.0% |
| ! | ATGTATCTACTAATAGAAAG+TGG | + | chr7.3:2860613-2860632 | MS.gene072429:intron | 25.0% |
| ! | ATTCTTGATATCCTTAGAAA+AGG | - | chr7.3:2862537-2862556 | None:intergenic | 25.0% |
| ! | ATTTCTATGTTGGTATACTA+TGG | + | chr7.3:2862051-2862070 | MS.gene072429:intron | 25.0% |
| ! | CAAATTGTACTATATCTCTA+AGG | - | chr7.3:2865068-2865087 | None:intergenic | 25.0% |
| ! | CATGATCCTAAAAAAATATC+AGG | - | chr7.3:2863580-2863599 | None:intergenic | 25.0% |
| ! | CATTATTGCAATTTCTATGT+TGG | + | chr7.3:2862041-2862060 | MS.gene072429:intron | 25.0% |
| ! | CTATGTATTGCTTATCATAA+CGG | + | chr7.3:2864548-2864567 | MS.gene072429:CDS | 25.0% |
| ! | GTAATCTTTGATCACTTAAA+GGG | - | chr7.3:2860392-2860411 | None:intergenic | 25.0% |
| ! | GTTCTATATGCAAAAAAAGA+TGG | + | chr7.3:2861221-2861240 | MS.gene072429:CDS | 25.0% |
| ! | TAAAATTAAAAAGGGTAACG+CGG | - | chr7.3:2864301-2864320 | None:intergenic | 25.0% |
| ! | TCTGAAAGAAAGCAAAATAA+GGG | - | chr7.3:2861463-2861482 | None:intergenic | 25.0% |
| ! | TGTCTGTAAAAATAGAATTG+GGG | - | chr7.3:2859647-2859666 | None:intergenic | 25.0% |
| ! | TTTAACAATTCATTGCAGAT+AGG | - | chr7.3:2859796-2859815 | None:intergenic | 25.0% |
| !! | AGTAATTTTGCAATTTCATC+GGG | + | chr7.3:2860282-2860301 | MS.gene072429:intron | 25.0% |
| !! | ATGAATTTGAAACTAGTAGT+TGG | + | chr7.3:2861803-2861822 | MS.gene072429:intron | 25.0% |
| !! | ATTGTTCCTTTTCACAATAT+TGG | - | chr7.3:2863226-2863245 | None:intergenic | 25.0% |
| !! | CAAATATCAATCTTACCTTT+TGG | - | chr7.3:2863469-2863488 | None:intergenic | 25.0% |
| !! | GAGTAATTTTGCAATTTCAT+CGG | + | chr7.3:2860281-2860300 | MS.gene072429:intron | 25.0% |
| !! | TTTCTTTAATTTCCTTAGCA+TGG | + | chr7.3:2864811-2864830 | MS.gene072429:intron | 25.0% |
| !! | TTTTACTGTCAAATTTGAAG+CGG | + | chr7.3:2859898-2859917 | MS.gene072429:intron | 25.0% |
| !!! | AAGTTGATGATTAAGAGATT+AGG | - | chr7.3:2863504-2863523 | None:intergenic | 25.0% |
| !!! | AATGTTTTTTCAGCTTCAAA+TGG | + | chr7.3:2863383-2863402 | MS.gene072429:intron | 25.0% |
| !!! | GAAATCAACTTGTTAGTTAT+CGG | - | chr7.3:2860844-2860863 | None:intergenic | 25.0% |
| !!! | GTCATTTTGTTTTTTCTTGT+AGG | + | chr7.3:2862509-2862528 | MS.gene072429:intron | 25.0% |
| !!! | GTTTTTTTGTTTTGTTTAGG+TGG | + | chr7.3:2864383-2864402 | MS.gene072429:intron | 25.0% |
| !!! | TACAATTTTAAGGACTAAGT+TGG | - | chr7.3:2861651-2861670 | None:intergenic | 25.0% |
| !!! | TGGGTTTTTTCAATTTAACA+TGG | - | chr7.3:2862012-2862031 | None:intergenic | 25.0% |
| !!! | TGTTTTGATTTCAATATCAG+CGG | + | chr7.3:2862968-2862987 | MS.gene072429:CDS | 25.0% |
| !!! | TTTTCTAAGGATATCAAGAA+TGG | + | chr7.3:2862536-2862555 | MS.gene072429:CDS | 25.0% |
| AAAAAAACGGAAATCAGTCA+TGG | - | chr7.3:2861173-2861192 | None:intergenic | 30.0% | |
| AAAATTTGTGTAGGCTATGA+TGG | + | chr7.3:2864068-2864087 | MS.gene072429:intron | 30.0% | |
| AACAAACAACAACAATGATG+CGG | + | chr7.3:2859549-2859568 | MS.gene072429:CDS | 30.0% | |
| AACAAAGACTAGAGAACTTT+AGG | - | chr7.3:2863049-2863068 | None:intergenic | 30.0% | |
| AATCATGTTCGAAGAAATCT+TGG | + | chr7.3:2862133-2862152 | MS.gene072429:CDS | 30.0% | |
| AATGAAATTTGGATGCTTGT+GGG | - | chr7.3:2865305-2865324 | None:intergenic | 30.0% | |
| AATTAAATCCATCTCTCCAT+TGG | + | chr7.3:2861737-2861756 | MS.gene072429:intron | 30.0% | |
| ACAAAGACTAGAGAACTTTA+GGG | - | chr7.3:2863048-2863067 | None:intergenic | 30.0% | |
| AGAGCTGTTATATGATGAAA+GGG | - | chr7.3:2864523-2864542 | None:intergenic | 30.0% | |
| AGATGGGAAATTTGAAGAAT+TGG | + | chr7.3:2861238-2861257 | MS.gene072429:CDS | 30.0% | |
| AGTTCTATGATTCTGATAAG+CGG | + | chr7.3:2864109-2864128 | MS.gene072429:CDS | 30.0% | |
| ATAAAACAATTGACACCTAC+CGG | - | chr7.3:2863312-2863331 | None:intergenic | 30.0% | |
| ATAACTTCAGTCTTGCAAAT+AGG | - | chr7.3:2862582-2862601 | None:intergenic | 30.0% | |
| ATGAAAGACAAAAACTGATC+AGG | - | chr7.3:2865240-2865259 | None:intergenic | 30.0% | |
| ATGGATCACAATAACATTAG+AGG | + | chr7.3:2862713-2862732 | MS.gene072429:intron | 30.0% | |
| CTACTAGATTAACTTTGTAG+GGG | - | chr7.3:2861901-2861920 | None:intergenic | 30.0% | |
| GAAACATATATATGTCAGCA+GGG | - | chr7.3:2862276-2862295 | None:intergenic | 30.0% | |
| GAAATTATTTGAGCTGTGAT+TGG | - | chr7.3:2862783-2862802 | None:intergenic | 30.0% | |
| GACTACTAGATTAACTTTGT+AGG | - | chr7.3:2861903-2861922 | None:intergenic | 30.0% | |
| GATGGGAAATTTGAAGAATT+GGG | + | chr7.3:2861239-2861258 | MS.gene072429:CDS | 30.0% | |
| GGTAAGATTGATATTTGTCA+TGG | + | chr7.3:2863472-2863491 | MS.gene072429:intron | 30.0% | |
| TAATGAAATTTGGATGCTTG+TGG | - | chr7.3:2865306-2865325 | None:intergenic | 30.0% | |
| TACTAGATTAACTTTGTAGG+GGG | - | chr7.3:2861900-2861919 | None:intergenic | 30.0% | |
| TACTCTGATAAAAGAGACAT+TGG | - | chr7.3:2863867-2863886 | None:intergenic | 30.0% | |
| TAGAGCTGTTATATGATGAA+AGG | - | chr7.3:2864524-2864543 | None:intergenic | 30.0% | |
| TCAAAACACTCGATAACTAA+TGG | - | chr7.3:2862956-2862975 | None:intergenic | 30.0% | |
| TCGGTTAAATTCATACCAAA+AGG | + | chr7.3:2863451-2863470 | MS.gene072429:CDS | 30.0% | |
| TGAAACATATATATGTCAGC+AGG | - | chr7.3:2862277-2862296 | None:intergenic | 30.0% | |
| TGATATGGACATTACATCAA+AGG | + | chr7.3:2861051-2861070 | MS.gene072429:CDS | 30.0% | |
| TTACTTTGTACTTCTCTCAT+GGG | - | chr7.3:2864978-2864997 | None:intergenic | 30.0% | |
| TTATACACTGTCGATGTAAA+AGG | + | chr7.3:2862320-2862339 | MS.gene072429:intron | 30.0% | |
| TTTGCATATAGAACAAGCAT+AGG | - | chr7.3:2861215-2861234 | None:intergenic | 30.0% | |
| ! | ACAAGTATTTTGCATCTATC+TGG | + | chr7.3:2863924-2863943 | MS.gene072429:intron | 30.0% |
| ! | TGATGCTAGACAATTTTACT+TGG | - | chr7.3:2864606-2864625 | None:intergenic | 30.0% |
| ! | TGTAAGAGTATAGATCGATT+TGG | - | chr7.3:2861677-2861696 | None:intergenic | 30.0% |
| ! | TTTTGTTACAATACCATTCC+CGG | + | chr7.3:2864247-2864266 | MS.gene072429:intron | 30.0% |
| !! | ACCAACTATAAGTATCGATA+GGG | - | chr7.3:2864751-2864770 | None:intergenic | 30.0% |
| !! | GATTTGGTCCTACAATTTTA+AGG | - | chr7.3:2861661-2861680 | None:intergenic | 30.0% |
| !! | GTTTTATTCACTGAAGTGAT+TGG | + | chr7.3:2863325-2863344 | MS.gene072429:intron | 30.0% |
| !! | TATTTGTTATTGTTGGAACC+TGG | + | chr7.3:2860954-2860973 | MS.gene072429:intron | 30.0% |
| !!! | ACTGCTCTTTGATTTTTTGT+TGG | - | chr7.3:2859879-2859898 | None:intergenic | 30.0% |
| !!! | TCTCACTGTTTTAATCTGAA+TGG | + | chr7.3:2864177-2864196 | MS.gene072429:CDS | 30.0% |
| !!! | TTTTGTTTTGTTTAGGTGGA+AGG | + | chr7.3:2864387-2864406 | MS.gene072429:intron | 30.0% |
| AAATGGAGATCCTCAAAAGT+CGG | + | chr7.3:2863400-2863419 | MS.gene072429:CDS | 35.0% | |
| AAGCTATGCAATGAGAGAAA+AGG | + | chr7.3:2863131-2863150 | MS.gene072429:CDS | 35.0% | |
| ACATCTTGGACAATTACTTG+TGG | + | chr7.3:2860977-2860996 | MS.gene072429:intron | 35.0% | |
| ACCTCAATTTGTGTGAACAA+TGG | - | chr7.3:2859607-2859626 | None:intergenic | 35.0% | |
| ACTGAGATACATCATGGATA+TGG | + | chr7.3:2863684-2863703 | MS.gene072429:intron | 35.0% | |
| AGACATGTTGTGTTCAAAGA+TGG | - | chr7.3:2862678-2862697 | None:intergenic | 35.0% | |
| AGATATAAAAGGAGCGAAAG+AGG | + | chr7.3:2859501-2859520 | MS.gene072429:CDS | 35.0% | |
| AGATCAAGATTTCATTGGAG+AGG | + | chr7.3:2861948-2861967 | MS.gene072429:CDS | 35.0% | |
| AGTACCAATAACATGTGCTT+TGG | + | chr7.3:2864860-2864879 | MS.gene072429:intron | 35.0% | |
| ATAACTGGGCCAAATAAAGT+GGG | - | chr7.3:2864471-2864490 | None:intergenic | 35.0% | |
| ATATCAAGAATGGTTGAGAG+TGG | + | chr7.3:2862546-2862565 | MS.gene072429:CDS | 35.0% | |
| ATCCTATGAGAAGAACATCA+TGG | - | chr7.3:2864670-2864689 | None:intergenic | 35.0% | |
| ATGATGTTCTTCTCATAGGA+TGG | + | chr7.3:2864669-2864688 | MS.gene072429:intron | 35.0% | |
| ATGGTTGCAATAGATTTCAC+CGG | + | chr7.3:2863290-2863309 | MS.gene072429:CDS | 35.0% | |
| ATGTAGGAATAGGAAGATGA+AGG | - | chr7.3:2861364-2861383 | None:intergenic | 35.0% | |
| ATTTGGCCCAGTTATAAACT+TGG | + | chr7.3:2864476-2864495 | MS.gene072429:CDS | 35.0% | |
| CAATGATCTCATCTAGTAGT+TGG | + | chr7.3:2861831-2861850 | MS.gene072429:intron | 35.0% | |
| CGAATTGTTTGAATCCAGAA+TGG | + | chr7.3:2861279-2861298 | MS.gene072429:CDS | 35.0% | |
| CTCATAGGATGGAATTGTTA+CGG | + | chr7.3:2864680-2864699 | MS.gene072429:intron | 35.0% | |
| CTGCAAGATCAAGATTTCAT+TGG | + | chr7.3:2861943-2861962 | MS.gene072429:CDS | 35.0% | |
| CTTACTTTGTACTTCTCTCA+TGG | - | chr7.3:2864979-2864998 | None:intergenic | 35.0% | |
| GACATTGACACAACATATCA+TGG | + | chr7.3:2861495-2861514 | MS.gene072429:CDS | 35.0% | |
| GATTTCTTCTACACTTCTCA+AGG | + | chr7.3:2859574-2859593 | MS.gene072429:CDS | 35.0% | |
| GGTAAACAAACAAACCTTAG+TGG | - | chr7.3:2861526-2861545 | None:intergenic | 35.0% | |
| GGTCGTCATCATTTATGAAT+AGG | - | chr7.3:2861084-2861103 | None:intergenic | 35.0% | |
| TACTTTGTACTTCTCTCATG+GGG | - | chr7.3:2864977-2864996 | None:intergenic | 35.0% | |
| TATAAACTTGGCTGCACAAA+TGG | + | chr7.3:2864488-2864507 | MS.gene072429:CDS | 35.0% | |
| TATAACTGGGCCAAATAAAG+TGG | - | chr7.3:2864472-2864491 | None:intergenic | 35.0% | |
| TCAGATACTGAGATACATCA+TGG | + | chr7.3:2863678-2863697 | MS.gene072429:intron | 35.0% | |
| TGCTGGAAATTAAGACAAAC+TGG | - | chr7.3:2862633-2862652 | None:intergenic | 35.0% | |
| TGGATATGGCATGACATAAT+CGG | + | chr7.3:2863698-2863717 | MS.gene072429:intron | 35.0% | |
| TGGATTTGAACTGAACTTCA+TGG | + | chr7.3:2863271-2863290 | MS.gene072429:CDS | 35.0% | |
| TGTCTTAATTTCCAGCAGTT+TGG | + | chr7.3:2862636-2862655 | MS.gene072429:CDS | 35.0% | |
| TGTGGACCAATATTGTGAAA+AGG | + | chr7.3:2863217-2863236 | MS.gene072429:CDS | 35.0% | |
| TGTGTGTGAATCTAATTGCT+AGG | + | chr7.3:2860664-2860683 | MS.gene072429:intron | 35.0% | |
| TTACTTTACTTCCAAACTGC+TGG | - | chr7.3:2862650-2862669 | None:intergenic | 35.0% | |
| TTCTATACGACACAGATACT+TGG | - | chr7.3:2863982-2864001 | None:intergenic | 35.0% | |
| TTCTGAATCGATCATATCGT+TGG | - | chr7.3:2862812-2862831 | None:intergenic | 35.0% | |
| TTGCATTACATTGACGTATC+CGG | + | chr7.3:2863428-2863447 | MS.gene072429:CDS | 35.0% | |
| TTGGTATGAATTTAACCGAC+CGG | - | chr7.3:2863450-2863469 | None:intergenic | 35.0% | |
| ! | GGGTGCTTTTCAGATATAAA+AGG | + | chr7.3:2859490-2859509 | MS.gene072429:CDS | 35.0% |
| ! | TAAATGATGACGACCTGAAT+TGG | + | chr7.3:2861089-2861108 | MS.gene072429:intron | 35.0% |
| ! | TCGATACTTATAGTTGGTGT+TGG | + | chr7.3:2864753-2864772 | MS.gene072429:CDS | 35.0% |
| ! | TCTCATTGCATAGCTTTTCA+AGG | - | chr7.3:2863127-2863146 | None:intergenic | 35.0% |
| ! | TCTTGTAGGATCCTTTTCTA+AGG | + | chr7.3:2862523-2862542 | MS.gene072429:intron | 35.0% |
| ! | TGCTTTGGCTCAATTATTTC+AGG | + | chr7.3:2864875-2864894 | MS.gene072429:intron | 35.0% |
| ! | TTTGAAACTAGTAGTTGGCA+TGG | + | chr7.3:2861808-2861827 | MS.gene072429:intron | 35.0% |
| !! | AGACAAACTGGTTTCCATTT+TGG | - | chr7.3:2862621-2862640 | None:intergenic | 35.0% |
| !! | AGCAAGTAACTTGCTTGATA+TGG | + | chr7.3:2861036-2861055 | MS.gene072429:CDS | 35.0% |
| !! | AGTTGGAGGTGTTAATCAAA+AGG | + | chr7.3:2859525-2859544 | MS.gene072429:CDS | 35.0% |
| !! | CACCAACTATAAGTATCGAT+AGG | - | chr7.3:2864752-2864771 | None:intergenic | 35.0% |
| !! | CCAACTATAAGTATCGATAG+GGG | - | chr7.3:2864750-2864769 | None:intergenic | 35.0% |
| !!! | CACTGTTTTAATCTGAATGG+AGG | + | chr7.3:2864180-2864199 | MS.gene072429:CDS | 35.0% |
| !!! | TTAAACCCCGACCTTTTTTT+TGG | - | chr7.3:2860644-2860663 | None:intergenic | 35.0% |
| AACAGTCTCTTCAGCATGAA+TGG | - | chr7.3:2862167-2862186 | None:intergenic | 40.0% | |
| AAGTGGCGAGACCAAAAAAA+AGG | + | chr7.3:2860630-2860649 | MS.gene072429:intron | 40.0% | |
| AGCATATCATTGCCATGCTA+AGG | - | chr7.3:2864826-2864845 | None:intergenic | 40.0% | |
| AGCGGCAATCATGTACTTAT+CGG | + | chr7.3:2862986-2863005 | MS.gene072429:CDS | 40.0% | |
| AGTAATTGTCCAAGATGTCC+AGG | - | chr7.3:2860975-2860994 | None:intergenic | 40.0% | |
| ATATCATGGCGTTTCCACTA+AGG | + | chr7.3:2861509-2861528 | MS.gene072429:CDS | 40.0% | |
| ATCTCTCCATTGGTATTTGG+AGG | + | chr7.3:2861747-2861766 | MS.gene072429:intron | 40.0% | |
| ATTACATTGACGTATCCGGT+CGG | + | chr7.3:2863432-2863451 | MS.gene072429:CDS | 40.0% | |
| ATTCATGATAGCACGACACA+TGG | - | chr7.3:2859967-2859986 | None:intergenic | 40.0% | |
| ATTTGGATGCTTGTGGGAAA+TGG | - | chr7.3:2865299-2865318 | None:intergenic | 40.0% | |
| ATTTGTGTAGGCTATGATGG+AGG | + | chr7.3:2864071-2864090 | MS.gene072429:intron | 40.0% | |
| CAAACGTAAAGGACAAGAGA+AGG | + | chr7.3:2863175-2863194 | MS.gene072429:CDS | 40.0% | |
| CCCCTATCGATACTTATAGT+TGG | + | chr7.3:2864747-2864766 | MS.gene072429:CDS | 40.0% | |
| CCTCGCTTAAAAAGTTCTAC+TGG | + | chr7.3:2864918-2864937 | MS.gene072429:CDS | 40.0% | |
| CTATCAGGACCCACTTTATT+TGG | + | chr7.3:2864459-2864478 | MS.gene072429:CDS | 40.0% | |
| CTTCTCTTGTCCTTTACGTT+TGG | - | chr7.3:2863177-2863196 | None:intergenic | 40.0% | |
| GACCTCTGATAAATTGCAAC+TGG | - | chr7.3:2861974-2861993 | None:intergenic | 40.0% | |
| GCCATTGTTCACACAAATTG+AGG | + | chr7.3:2859603-2859622 | MS.gene072429:CDS | 40.0% | |
| GGATTTGGAGGAAATGTACA+CGG | + | chr7.3:2864144-2864163 | MS.gene072429:CDS | 40.0% | |
| GTCCATGATGTTCTTCTCAT+AGG | + | chr7.3:2864665-2864684 | MS.gene072429:intron | 40.0% | |
| GTGCAGCCAAGTTTATAACT+GGG | - | chr7.3:2864485-2864504 | None:intergenic | 40.0% | |
| GTGTCGTATAGAACTAGTGT+CGG | + | chr7.3:2863989-2864008 | MS.gene072429:intron | 40.0% | |
| GTTTAGGTGGAAGGAATTGA+AGG | + | chr7.3:2864396-2864415 | MS.gene072429:intron | 40.0% | |
| TCCAAATACCAATGGAGAGA+TGG | - | chr7.3:2861748-2861767 | None:intergenic | 40.0% | |
| TCCATCTCTCCATTGGTATT+TGG | + | chr7.3:2861744-2861763 | MS.gene072429:intron | 40.0% | |
| TCTAAAGGGTCAACTCTTTG+TGG | + | chr7.3:2863199-2863218 | MS.gene072429:CDS | 40.0% | |
| TCTCTCCATTGGTATTTGGA+GGG | + | chr7.3:2861748-2861767 | MS.gene072429:intron | 40.0% | |
| TCTTGTCCTTTACGTTTGGA+TGG | - | chr7.3:2863173-2863192 | None:intergenic | 40.0% | |
| TGAAGGATAGCTTACACAAG+TGG | - | chr7.3:2861347-2861366 | None:intergenic | 40.0% | |
| TGAGCCAAAGCACATGTTAT+TGG | - | chr7.3:2864867-2864886 | None:intergenic | 40.0% | |
| TGATGCACATCTATACAACC+TGG | + | chr7.3:2861857-2861876 | MS.gene072429:intron | 40.0% | |
| TGTACACCTTTAGTGATGCT+TGG | + | chr7.3:2860001-2860020 | MS.gene072429:intron | 40.0% | |
| TGTGCAGCCAAGTTTATAAC+TGG | - | chr7.3:2864486-2864505 | None:intergenic | 40.0% | |
| TGTTATCCAAGCGAGAACAA+CGG | - | chr7.3:2862219-2862238 | None:intergenic | 40.0% | |
| TTACGTAGTGTGACTCTATC+AGG | + | chr7.3:2864444-2864463 | MS.gene072429:CDS | 40.0% | |
| TTGCAATAGATTTCACCGGT+AGG | + | chr7.3:2863294-2863313 | MS.gene072429:intron | 40.0% | |
| TTTGGATGCTTGTGGGAAAT+GGG | - | chr7.3:2865298-2865317 | None:intergenic | 40.0% | |
| ! | AGGACAAGAGAAGGTTCTAA+AGG | + | chr7.3:2863184-2863203 | MS.gene072429:CDS | 40.0% |
| ! | CGGAAATCAGTCATGGTTTT+AGG | - | chr7.3:2861166-2861185 | None:intergenic | 40.0% |
| ! | GGAAGGAATTGAAGGCATAA+TGG | + | chr7.3:2864404-2864423 | MS.gene072429:CDS | 40.0% |
| ! | GGCTCAATTATTTCAGGTAC+TGG | + | chr7.3:2864881-2864900 | MS.gene072429:intron | 40.0% |
| ! | TGCAAAGAATCCGACTTTTG+AGG | - | chr7.3:2863413-2863432 | None:intergenic | 40.0% |
| !! | ATTCTTGTGTTTTTGCCAGG+AGG | + | chr7.3:2865177-2865196 | MS.gene072429:intron | 40.0% |
| !! | CCAGTAGAACTTTTTAAGCG+AGG | - | chr7.3:2864921-2864940 | None:intergenic | 40.0% |
| !! | CTCATTCTTGTGTTTTTGCC+AGG | + | chr7.3:2865174-2865193 | MS.gene072429:intron | 40.0% |
| !! | GGACAAGAGAAGGTTCTAAA+GGG | + | chr7.3:2863185-2863204 | MS.gene072429:CDS | 40.0% |
| !! | TCTGTTGCTTTGAAGCCTTA+AGG | - | chr7.3:2862110-2862129 | None:intergenic | 40.0% |
| AAAACGTTGCCAGCCAATTC+AGG | - | chr7.3:2861105-2861124 | None:intergenic | 45.0% | |
| AAATGGGATTGGGAAGGAAG+TGG | - | chr7.3:2865282-2865301 | None:intergenic | 45.0% | |
| AAGGATATAGACCTCCATGC+TGG | - | chr7.3:2864793-2864812 | None:intergenic | 45.0% | |
| ACATGGACAACATATCCTCG+AGG | - | chr7.3:2859950-2859969 | None:intergenic | 45.0% | |
| ACGACACAGATACTTGGATG+CGG | - | chr7.3:2863976-2863995 | None:intergenic | 45.0% | |
| AGATAGTGACCAAACCAAGC+CGG | + | chr7.3:2862077-2862096 | MS.gene072429:intron | 45.0% | |
| ATGCTTGTGGGAAATGGGAT+TGG | - | chr7.3:2865293-2865312 | None:intergenic | 45.0% | |
| CGAGACCAAAAAAAAGGTCG+GGG | + | chr7.3:2860636-2860655 | MS.gene072429:intron | 45.0% | |
| CTAGTCCCTCCAAATACCAA+TGG | - | chr7.3:2861756-2861775 | None:intergenic | 45.0% | |
| GAAGCCTTAAGGTTAAGCTC+CGG | - | chr7.3:2862099-2862118 | None:intergenic | 45.0% | |
| GCAGAACCAAGCATCACTAA+AGG | - | chr7.3:2860010-2860029 | None:intergenic | 45.0% | |
| GCGAGACCAAAAAAAAGGTC+GGG | + | chr7.3:2860635-2860654 | MS.gene072429:intron | 45.0% | |
| GCGGCAATCATGTACTTATC+GGG | + | chr7.3:2862987-2863006 | MS.gene072429:CDS | 45.0% | |
| GGCCAGTTGCAATTTATCAG+AGG | + | chr7.3:2861969-2861988 | MS.gene072429:CDS | 45.0% | |
| GGCGAGACCAAAAAAAAGGT+CGG | + | chr7.3:2860634-2860653 | MS.gene072429:intron | 45.0% | |
| GTCATGCCATCCAAACGTAA+AGG | + | chr7.3:2863164-2863183 | MS.gene072429:CDS | 45.0% | |
| TATCTTCCGTTGTTCTCGCT+TGG | + | chr7.3:2862210-2862229 | MS.gene072429:CDS | 45.0% | |
| TCAAGAATGGTTGAGAGTGG+AGG | + | chr7.3:2862549-2862568 | MS.gene072429:CDS | 45.0% | |
| TGATAAGCGGTTTCCTGCTT+GGG | + | chr7.3:2864122-2864141 | MS.gene072429:CDS | 45.0% | |
| TGCTTGTGGGAAATGGGATT+GGG | - | chr7.3:2865292-2865311 | None:intergenic | 45.0% | |
| TTGTAGGGGGAGATTTGACT+TGG | - | chr7.3:2861887-2861906 | None:intergenic | 45.0% | |
| TTGTTGGAACCTGGACATCT+TGG | + | chr7.3:2860963-2860982 | MS.gene072429:intron | 45.0% | |
| TTTGGAGGAAATGTACACGG+TGG | + | chr7.3:2864147-2864166 | MS.gene072429:CDS | 45.0% | |
| ! | CTGAAGAGACTGTTGCTTCA+AGG | + | chr7.3:2862173-2862192 | MS.gene072429:CDS | 45.0% |
| ! | TGAAGCGGATTCGAGTAGTT+TGG | + | chr7.3:2859913-2859932 | MS.gene072429:intron | 45.0% |
| !! | AGTGATGCTTGGTTCTGCTT+TGG | + | chr7.3:2860012-2860031 | MS.gene072429:intron | 45.0% |
| !! | CAGGTACTGGATGCTGATAA+CGG | + | chr7.3:2864894-2864913 | MS.gene072429:intron | 45.0% |
| !!! | AAATATACTATTTTTTTTTA+AGG | + | chr7.3:2860889-2860908 | MS.gene072429:intron | 5.0% |
| !!! | ATAATTATTTGATATTTTTT+TGG | - | chr7.3:2860538-2860557 | None:intergenic | 5.0% |
| AAAGGAGCGAAAGAGGCAGT+TGG | + | chr7.3:2859508-2859527 | MS.gene072429:CDS | 50.0% | |
| AATCTGAATGGAGGAGCTCC+AGG | + | chr7.3:2864189-2864208 | MS.gene072429:CDS | 50.0% | |
| ACAACAGAGATCTGTCCTCC+TGG | - | chr7.3:2865195-2865214 | None:intergenic | 50.0% | |
| CAAGCCGGAGCTTAACCTTA+AGG | + | chr7.3:2862092-2862111 | MS.gene072429:CDS | 50.0% | |
| CTCCATGCTGGTGAAATCAG+CGG | - | chr7.3:2864781-2864800 | None:intergenic | 50.0% | |
| CTCTGTTGTGCAAGCTCTTC+TGG | + | chr7.3:2865206-2865225 | MS.gene072429:CDS | 50.0% | |
| CTGATAAGCGGTTTCCTGCT+TGG | + | chr7.3:2864121-2864140 | MS.gene072429:CDS | 50.0% | |
| CTTAAGGTTAAGCTCCGGCT+TGG | - | chr7.3:2862094-2862113 | None:intergenic | 50.0% | |
| GATAAGCGGTTTCCTGCTTG+GGG | + | chr7.3:2864123-2864142 | MS.gene072429:CDS | 50.0% | |
| TGTGGGAAATGGGATTGGGA+AGG | - | chr7.3:2865288-2865307 | None:intergenic | 50.0% | |
| TTTCCTCCAAATCCCCAAGC+AGG | - | chr7.3:2864138-2864157 | None:intergenic | 50.0% | |
| TTTCCTGCTTGGGGATTTGG+AGG | + | chr7.3:2864132-2864151 | MS.gene072429:CDS | 50.0% | |
| ! | GTGTAGGCTATGATGGAGGT+TGG | + | chr7.3:2864075-2864094 | MS.gene072429:intron | 50.0% |
| ! | TGATGACGACCTGAATTGGC+TGG | + | chr7.3:2861093-2861112 | MS.gene072429:intron | 50.0% |
| !! | AGTGTCGGCATTGCGTATCT+GGG | + | chr7.3:2864004-2864023 | MS.gene072429:intron | 50.0% |
| !! | GAGATTTGACTTGGCAGTCC+AGG | - | chr7.3:2861878-2861897 | None:intergenic | 50.0% |
| !! | TAGTGTCGGCATTGCGTATC+TGG | + | chr7.3:2864003-2864022 | MS.gene072429:intron | 50.0% |
| ATTCCCGGACTCTGCGTATG+CGG | + | chr7.3:2864262-2864281 | MS.gene072429:intron | 55.0% | |
| CGGTTTCCTGCTTGGGGATT+TGG | + | chr7.3:2864129-2864148 | MS.gene072429:CDS | 55.0% | |
| TCTCACACCTCAGAGCTACC+TGG | - | chr7.3:2864210-2864229 | None:intergenic | 55.0% | |
| TTGGAATGTTGCGAGCCTCG+AGG | + | chr7.3:2859932-2859951 | MS.gene072429:intron | 55.0% | |
| !! | AGCCGCTGATTTCACCAGCA+TGG | + | chr7.3:2864776-2864795 | MS.gene072429:CDS | 55.0% |
| !! | CGCTGATTTCACCAGCATGG+AGG | + | chr7.3:2864779-2864798 | MS.gene072429:CDS | 55.0% |
| !! | GGTTAAGCTCCGGCTTGGTT+TGG | - | chr7.3:2862089-2862108 | None:intergenic | 55.0% |
| GCATACGCAGAGTCCGGGAA+TGG | - | chr7.3:2864263-2864282 | None:intergenic | 60.0% | |
| GGAGCGAAAGAGGCAGTTGG+AGG | + | chr7.3:2859511-2859530 | MS.gene072429:CDS | 60.0% | |
| TTCCCGGACTCTGCGTATGC+GGG | + | chr7.3:2864263-2864282 | MS.gene072429:intron | 60.0% | |
| ! | AGGAGCTCCAGGTAGCTCTG+AGG | + | chr7.3:2864200-2864219 | MS.gene072429:CDS | 60.0% |
| CTCCCGCATACGCAGAGTCC+GGG | - | chr7.3:2864268-2864287 | None:intergenic | 65.0% | |
| GCTCCCGCATACGCAGAGTC+CGG | - | chr7.3:2864269-2864288 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 2859484 | 2865326 | 2859484 | ID=MS.gene072429 |
| chr7.3 | mRNA | 2859484 | 2865326 | 2859484 | ID=MS.gene072429.t1;Parent=MS.gene072429 |
| chr7.3 | exon | 2859484 | 2859624 | 2859484 | ID=MS.gene072429.t1.exon1;Parent=MS.gene072429.t1 |
| chr7.3 | CDS | 2859484 | 2859624 | 2859484 | ID=cds.MS.gene072429.t1;Parent=MS.gene072429.t1 |
| chr7.3 | exon | 2861025 | 2861072 | 2861025 | ID=MS.gene072429.t1.exon2;Parent=MS.gene072429.t1 |
| chr7.3 | CDS | 2861025 | 2861072 | 2861025 | ID=cds.MS.gene072429.t1;Parent=MS.gene072429.t1 |
| chr7.3 | exon | 2861206 | 2861351 | 2861206 | ID=MS.gene072429.t1.exon3;Parent=MS.gene072429.t1 |
| chr7.3 | CDS | 2861206 | 2861351 | 2861206 | ID=cds.MS.gene072429.t1;Parent=MS.gene072429.t1 |
| chr7.3 | exon | 2861482 | 2861530 | 2861482 | ID=MS.gene072429.t1.exon4;Parent=MS.gene072429.t1 |
| chr7.3 | CDS | 2861482 | 2861530 | 2861482 | ID=cds.MS.gene072429.t1;Parent=MS.gene072429.t1 |
| chr7.3 | exon | 2861934 | 2861990 | 2861934 | ID=MS.gene072429.t1.exon5;Parent=MS.gene072429.t1 |
| chr7.3 | CDS | 2861934 | 2861990 | 2861934 | ID=cds.MS.gene072429.t1;Parent=MS.gene072429.t1 |
| chr7.3 | exon | 2862079 | 2862258 | 2862079 | ID=MS.gene072429.t1.exon6;Parent=MS.gene072429.t1 |
| chr7.3 | CDS | 2862079 | 2862258 | 2862079 | ID=cds.MS.gene072429.t1;Parent=MS.gene072429.t1 |
| chr7.3 | exon | 2862531 | 2862665 | 2862531 | ID=MS.gene072429.t1.exon7;Parent=MS.gene072429.t1 |
| chr7.3 | CDS | 2862531 | 2862665 | 2862531 | ID=cds.MS.gene072429.t1;Parent=MS.gene072429.t1 |
| chr7.3 | exon | 2862947 | 2863008 | 2862947 | ID=MS.gene072429.t1.exon8;Parent=MS.gene072429.t1 |
| chr7.3 | CDS | 2862947 | 2863008 | 2862947 | ID=cds.MS.gene072429.t1;Parent=MS.gene072429.t1 |
| chr7.3 | exon | 2863100 | 2863311 | 2863100 | ID=MS.gene072429.t1.exon9;Parent=MS.gene072429.t1 |
| chr7.3 | CDS | 2863100 | 2863311 | 2863100 | ID=cds.MS.gene072429.t1;Parent=MS.gene072429.t1 |
| chr7.3 | exon | 2863396 | 2863472 | 2863396 | ID=MS.gene072429.t1.exon10;Parent=MS.gene072429.t1 |
| chr7.3 | CDS | 2863396 | 2863472 | 2863396 | ID=cds.MS.gene072429.t1;Parent=MS.gene072429.t1 |
| chr7.3 | exon | 2864081 | 2864221 | 2864081 | ID=MS.gene072429.t1.exon11;Parent=MS.gene072429.t1 |
| chr7.3 | CDS | 2864081 | 2864221 | 2864081 | ID=cds.MS.gene072429.t1;Parent=MS.gene072429.t1 |
| chr7.3 | exon | 2864402 | 2864569 | 2864402 | ID=MS.gene072429.t1.exon12;Parent=MS.gene072429.t1 |
| chr7.3 | CDS | 2864402 | 2864569 | 2864402 | ID=cds.MS.gene072429.t1;Parent=MS.gene072429.t1 |
| chr7.3 | exon | 2864687 | 2864800 | 2864687 | ID=MS.gene072429.t1.exon13;Parent=MS.gene072429.t1 |
| chr7.3 | CDS | 2864687 | 2864800 | 2864687 | ID=cds.MS.gene072429.t1;Parent=MS.gene072429.t1 |
| chr7.3 | exon | 2864897 | 2864993 | 2864897 | ID=MS.gene072429.t1.exon14;Parent=MS.gene072429.t1 |
| chr7.3 | CDS | 2864897 | 2864993 | 2864897 | ID=cds.MS.gene072429.t1;Parent=MS.gene072429.t1 |
| chr7.3 | exon | 2865196 | 2865326 | 2865196 | ID=MS.gene072429.t1.exon15;Parent=MS.gene072429.t1 |
| chr7.3 | CDS | 2865196 | 2865326 | 2865196 | ID=cds.MS.gene072429.t1;Parent=MS.gene072429.t1 |
| Gene Sequence |
| Protein sequence |
