Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072553.t1 | XP_013450459.1 | 91 | 211 | 19 | 0 | 1 | 211 | 5 | 215 | 2.00E-100 | 375.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072553.t1 | A0A072U461 | 91.0 | 211 | 19 | 0 | 1 | 211 | 5 | 215 | 1.5e-100 | 375.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050442 | MS.gene072553 | 0.816738 | 4.74E-52 | -1.69E-46 |
| MS.gene050750 | MS.gene072553 | 0.846597 | 1.97E-59 | -1.69E-46 |
| MS.gene050953 | MS.gene072553 | 0.86956 | 2.83E-66 | -1.69E-46 |
| MS.gene053494 | MS.gene072553 | 0.812151 | 4.90E-51 | -1.69E-46 |
| MS.gene054405 | MS.gene072553 | 0.861967 | 7.07E-64 | -1.69E-46 |
| MS.gene054930 | MS.gene072553 | 0.80033 | 1.52E-48 | -1.69E-46 |
| MS.gene05510 | MS.gene072553 | 0.814029 | 1.90E-51 | -1.69E-46 |
| MS.gene055701 | MS.gene072553 | 0.821076 | 4.89E-53 | -1.69E-46 |
| MS.gene057194 | MS.gene072553 | 0.839189 | 1.84E-57 | -1.69E-46 |
| MS.gene058146 | MS.gene072553 | 0.80582 | 1.11E-49 | -1.69E-46 |
| MS.gene060011 | MS.gene072553 | 0.803945 | 2.74E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072553.t1 | MTR_7g112110 | 96.682 | 211 | 7 | 0 | 1 | 211 | 5 | 215 | 1.26e-151 | 419 |
| MS.gene072553.t1 | MTR_7g112120 | 78.641 | 206 | 40 | 2 | 1 | 202 | 1 | 206 | 2.33e-115 | 328 |
| MS.gene072553.t1 | MTR_1g084040 | 74.020 | 204 | 53 | 0 | 1 | 204 | 3 | 206 | 1.46e-105 | 305 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072553.t1 | AT1G56423 | 66.010 | 203 | 69 | 0 | 1 | 203 | 1 | 203 | 9.21e-98 | 285 |
| MS.gene072553.t1 | AT1G56423 | 66.010 | 203 | 69 | 0 | 1 | 203 | 1 | 203 | 1.05e-97 | 285 |
Find 53 sgRNAs with CRISPR-Local
Find 101 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATTAAATTGCTTTGATA+TGG | 0.171309 | 7.3:-4356629 | MS.gene072553:CDS |
| TAATGTAAACTTCCCACTTT+TGG | 0.220946 | 7.3:+4356648 | None:intergenic |
| TGTGATGCGGTTGGCCTTAC+GGG | 0.286048 | 7.3:+4356411 | None:intergenic |
| AGAGGAACTGGTACGTTGTT+TGG | 0.307326 | 7.3:-4356313 | MS.gene072553:CDS |
| GAGCAAAGGCTTGGAAGATT+TGG | 0.325168 | 7.3:-4356265 | MS.gene072553:CDS |
| CTGTGATGCGGTTGGCCTTA+CGG | 0.349279 | 7.3:+4356410 | None:intergenic |
| AACTTACGGTGTAGGTTTCA+TGG | 0.367784 | 7.3:-4356290 | MS.gene072553:CDS |
| TTATTAAATTGCTTTGATAT+GGG | 0.378126 | 7.3:-4356628 | MS.gene072553:CDS |
| GGAAGATTTGGTTATCTTGT+TGG | 0.387002 | 7.3:-4356253 | MS.gene072553:CDS |
| TTATCTTGTTGGAAGTCAAT+TGG | 0.396840 | 7.3:-4356242 | MS.gene072553:CDS |
| TTGGAAGTCAATTGGGAAGT+TGG | 0.398362 | 7.3:-4356234 | MS.gene072553:CDS |
| AGTTGGATTGGAAGTAGAAT+AGG | 0.408974 | 7.3:-4356217 | MS.gene072553:CDS |
| TCTTGTTGATGCTGCTTCAC+AGG | 0.412869 | 7.3:-4356500 | MS.gene072553:CDS |
| AATTGCTTTGATATGGGCTC+AGG | 0.437174 | 7.3:-4356622 | MS.gene072553:CDS |
| GTGCATTTCGTGTTGCAGTA+TGG | 0.438736 | 7.3:-4356166 | MS.gene072553:CDS |
| GTCCCATCCGGAGGAGATGA+TGG | 0.439322 | 7.3:+4356384 | None:intergenic |
| TATCTTGTTGGAAGTCAATT+GGG | 0.442064 | 7.3:-4356241 | MS.gene072553:CDS |
| GAGGGATTCCTCAGAGGAAC+TGG | 0.444285 | 7.3:-4356325 | MS.gene072553:CDS |
| GGTACGTTGTTTGGAACTTA+CGG | 0.445217 | 7.3:-4356304 | MS.gene072553:CDS |
| AGTCAATTGGGAAGTTGGAT+TGG | 0.450366 | 7.3:-4356229 | MS.gene072553:CDS |
| ATGGTATATGATGTGGCTAA+TGG | 0.468429 | 7.3:-4356190 | MS.gene072553:CDS |
| TTTGAAGCTGTTTACTATGG+TGG | 0.481190 | 7.3:-4356358 | MS.gene072553:CDS |
| CAATGATGGCAGATACAGAT+AGG | 0.486572 | 7.3:+4357424 | None:intergenic |
| GAGAACGCGTCATCCAAAAG+TGG | 0.497930 | 7.3:-4356661 | MS.gene072553:CDS |
| GTTGGATTGGAAGTAGAATA+GGG | 0.502946 | 7.3:-4356216 | MS.gene072553:CDS |
| ATCATTGTTCTTAGCATCAC+AGG | 0.509850 | 7.3:-4357408 | MS.gene072553:intron |
| CTTGTTGATGCTGCTTCACA+GGG | 0.511056 | 7.3:-4356499 | MS.gene072553:CDS |
| CAGCATCAACAAGAGCAGAT+TGG | 0.514551 | 7.3:+4356509 | None:intergenic |
| TTGTTTGGAACTTACGGTGT+AGG | 0.526991 | 7.3:-4356298 | MS.gene072553:CDS |
| TCCCATCATCTCCTCCGGAT+GGG | 0.528548 | 7.3:-4356386 | MS.gene072553:CDS |
| CGTAAGGCCAACCGCATCAC+AGG | 0.530423 | 7.3:-4356409 | MS.gene072553:CDS |
| ACTTACGGTGTAGGTTTCAT+GGG | 0.535716 | 7.3:-4356289 | MS.gene072553:CDS |
| ACAGGTCCCATCATCTCCTC+CGG | 0.536969 | 7.3:-4356391 | MS.gene072553:CDS |
| GGCGAAATTGGCTACCCGTA+AGG | 0.540905 | 7.3:-4356425 | MS.gene072553:CDS |
| GGCTCAGGAACGCTAGCATG+TGG | 0.544815 | 7.3:-4356607 | MS.gene072553:CDS |
| GTCCCATCATCTCCTCCGGA+TGG | 0.557344 | 7.3:-4356387 | MS.gene072553:CDS |
| TCTGAGGAATCCCTCTGTAA+AGG | 0.559119 | 7.3:+4356333 | None:intergenic |
| CTCAGGAACGCTAGCATGTG+GGG | 0.570098 | 7.3:-4356605 | MS.gene072553:CDS |
| TGGAAGTAGAATAGGGCTCA+TGG | 0.576358 | 7.3:-4356209 | MS.gene072553:CDS |
| TCCCATCCGGAGGAGATGAT+GGG | 0.581940 | 7.3:+4356385 | None:intergenic |
| TCTCCTCTTCTGAAAATCCA+TGG | 0.583117 | 7.3:+4357458 | None:intergenic |
| TATGGTGGTACCTTTACAGA+GGG | 0.585211 | 7.3:-4356343 | MS.gene072553:CDS |
| GCTCAGGAACGCTAGCATGT+GGG | 0.607284 | 7.3:-4356606 | MS.gene072553:CDS |
| TGTGATGCTAAGAACAATGA+TGG | 0.627342 | 7.3:+4357410 | None:intergenic |
| GATGGGACCTGTGATGCGGT+TGG | 0.637538 | 7.3:+4356402 | None:intergenic |
| AGAACGCGTCATCCAAAAGT+GGG | 0.637848 | 7.3:-4356660 | MS.gene072553:CDS |
| AGGGCTCATGGTATATGATG+TGG | 0.638967 | 7.3:-4356197 | MS.gene072553:CDS |
| CTATGGTGGTACCTTTACAG+AGG | 0.649919 | 7.3:-4356344 | MS.gene072553:CDS |
| CTTACGGTGTAGGTTTCATG+GGG | 0.659609 | 7.3:-4356288 | MS.gene072553:CDS |
| TTTACAGAGGGATTCCTCAG+AGG | 0.683356 | 7.3:-4356331 | MS.gene072553:CDS |
| ACAACGTACCAGTTCCTCTG+AGG | 0.700531 | 7.3:+4356317 | None:intergenic |
| AGATGATGGGACCTGTGATG+CGG | 0.703866 | 7.3:+4356398 | None:intergenic |
| TTACGGTGTAGGTTTCATGG+GGG | 0.787530 | 7.3:-4356287 | MS.gene072553:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAATTATAATTAATGAAAA+TGG | + | chr7.3:4356873-4356892 | None:intergenic | 10.0% |
| !! | ATTATTAAATTGCTTTGATA+TGG | - | chr7.3:4356971-4356990 | MS.gene072553:intron | 15.0% |
| !! | ATTTGAATTTATCTATCTAA+TGG | + | chr7.3:4356712-4356731 | None:intergenic | 15.0% |
| !! | TTATTAAATTGCTTTGATAT+GGG | - | chr7.3:4356972-4356991 | MS.gene072553:intron | 15.0% |
| !! | AGGTTCAAAAATAGTATTAA+TGG | + | chr7.3:4356233-4356252 | None:intergenic | 20.0% |
| !! | GGTTCAAAAATAGTATTAAT+GGG | + | chr7.3:4356232-4356251 | None:intergenic | 20.0% |
| !!! | AATTGTCTTTATAACGTTTT+GGG | - | chr7.3:4356281-4356300 | MS.gene072553:CDS | 20.0% |
| !!! | TAATTGTCTTTATAACGTTT+TGG | - | chr7.3:4356280-4356299 | MS.gene072553:CDS | 20.0% |
| !!! | TTTTTTGAAAAAGTGATGTA+AGG | + | chr7.3:4356791-4356810 | None:intergenic | 20.0% |
| ! | AAATTATTGACCCCAAAAAT+TGG | - | chr7.3:4356371-4356390 | MS.gene072553:CDS | 25.0% |
| !!! | AATTTTTGGGGTCAATAATT+TGG | + | chr7.3:4356372-4356391 | None:intergenic | 25.0% |
| !!! | TTTTTTGAAGCTGTTTACTA+TGG | - | chr7.3:4357239-4357258 | MS.gene072553:intron | 25.0% |
| AATTAACGGCAGTAATTTAG+GGG | - | chr7.3:4356307-4356326 | MS.gene072553:CDS | 30.0% | |
| AATTGTTCCTTACATCAAAG+TGG | - | chr7.3:4356809-4356828 | MS.gene072553:intron | 30.0% | |
| CAATTAACGGCAGTAATTTA+GGG | - | chr7.3:4356306-4356325 | MS.gene072553:CDS | 30.0% | |
| TATCTTGTTGGAAGTCAATT+GGG | - | chr7.3:4357359-4357378 | MS.gene072553:intron | 30.0% | |
| TCAATTAACGGCAGTAATTT+AGG | - | chr7.3:4356305-4356324 | MS.gene072553:CDS | 30.0% | |
| TGAATAAGATAAACCTGATC+AGG | + | chr7.3:4356339-4356358 | None:intergenic | 30.0% | |
| TGGGTTCTCATATTTAACTA+TGG | - | chr7.3:4356844-4356863 | MS.gene072553:intron | 30.0% | |
| TTATCTTGTTGGAAGTCAAT+TGG | - | chr7.3:4357358-4357377 | MS.gene072553:intron | 30.0% | |
| ! | CTATTCTAGCATGGATTTTA+TGG | - | chr7.3:4356417-4356436 | MS.gene072553:CDS | 30.0% |
| ! | CTTTCTTTTCTATTCTAGCA+TGG | - | chr7.3:4356408-4356427 | MS.gene072553:CDS | 30.0% |
| ! | TAATGTAAACTTCCCACTTT+TGG | + | chr7.3:4356955-4356974 | None:intergenic | 30.0% |
| !!! | AACGTTTTGGGTTCAATTAA+CGG | - | chr7.3:4356293-4356312 | MS.gene072553:CDS | 30.0% |
| AAGCTATCTTGAAGAGTTTG+TGG | - | chr7.3:4356603-4356622 | MS.gene072553:CDS | 35.0% | |
| ATCATTGTTCTTAGCATCAC+AGG | - | chr7.3:4356192-4356211 | MS.gene072553:CDS | 35.0% | |
| ATGGTATATGATGTGGCTAA+TGG | - | chr7.3:4357410-4357429 | MS.gene072553:CDS | 35.0% | |
| CCTGAAACAAGGTAAAAAAG+CGG | - | chr7.3:4357154-4357173 | MS.gene072553:intron | 35.0% | |
| TGTGATGCTAAGAACAATGA+TGG | + | chr7.3:4356193-4356212 | None:intergenic | 35.0% | |
| TTGAATTGAGTCTGATGTGA+AGG | + | chr7.3:4356253-4356272 | None:intergenic | 35.0% | |
| ! | AGTTGGATTGGAAGTAGAAT+AGG | - | chr7.3:4357383-4357402 | MS.gene072553:intron | 35.0% |
| ! | ATTTTCAGAAGAGGAGAGTT+CGG | - | chr7.3:4356148-4356167 | MS.gene072553:CDS | 35.0% |
| ! | GGAAGATTTGGTTATCTTGT+TGG | - | chr7.3:4357347-4357366 | MS.gene072553:intron | 35.0% |
| ! | GTTGGATTGGAAGTAGAATA+GGG | - | chr7.3:4357384-4357403 | MS.gene072553:intron | 35.0% |
| ! | TTTGAAGCTGTTTACTATGG+TGG | - | chr7.3:4357242-4357261 | MS.gene072553:intron | 35.0% |
| !!! | CGCTTTTTTACCTTGTTTCA+GGG | + | chr7.3:4357156-4357175 | None:intergenic | 35.0% |
| !!! | GCATGTTTTTCTGAAGCAAT+TGG | + | chr7.3:4357134-4357153 | None:intergenic | 35.0% |
| AAATATGAGAACCCAGAGCT+AGG | + | chr7.3:4356839-4356858 | None:intergenic | 40.0% | |
| AACTTACGGTGTAGGTTTCA+TGG | - | chr7.3:4357310-4357329 | MS.gene072553:intron | 40.0% | |
| AATATGAGAACCCAGAGCTA+GGG | + | chr7.3:4356838-4356857 | None:intergenic | 40.0% | |
| AATTGCTTTGATATGGGCTC+AGG | - | chr7.3:4356978-4356997 | MS.gene072553:intron | 40.0% | |
| ACTTACGGTGTAGGTTTCAT+GGG | - | chr7.3:4357311-4357330 | MS.gene072553:intron | 40.0% | |
| AGCTTCAAAAAAGTCCCATC+CGG | + | chr7.3:4357231-4357250 | None:intergenic | 40.0% | |
| AGGGAAACCACTTTGATGTA+AGG | + | chr7.3:4356819-4356838 | None:intergenic | 40.0% | |
| AGGTAAAAAAGCGGCGAAAT+TGG | - | chr7.3:4357163-4357182 | MS.gene072553:intron | 40.0% | |
| AGTCAATTGGGAAGTTGGAT+TGG | - | chr7.3:4357371-4357390 | MS.gene072553:intron | 40.0% | |
| CAATGATGGCAGATACAGAT+AGG | + | chr7.3:4356179-4356198 | None:intergenic | 40.0% | |
| GAAAAACATGCCCTGAAACA+AGG | - | chr7.3:4357143-4357162 | MS.gene072553:intron | 40.0% | |
| TATGGTGGTACCTTTACAGA+GGG | - | chr7.3:4357257-4357276 | MS.gene072553:intron | 40.0% | |
| TTGACCCCAAAAATTGGCAT+AGG | - | chr7.3:4356377-4356396 | MS.gene072553:CDS | 40.0% | |
| TTGGAAGTCAATTGGGAAGT+TGG | - | chr7.3:4357366-4357385 | MS.gene072553:intron | 40.0% | |
| ! | CGTCTCCTATGCCAATTTTT+GGG | + | chr7.3:4356385-4356404 | None:intergenic | 40.0% |
| ! | GGTACGTTGTTTGGAACTTA+CGG | - | chr7.3:4357296-4357315 | MS.gene072553:intron | 40.0% |
| ! | GTCTCCTATGCCAATTTTTG+GGG | + | chr7.3:4356384-4356403 | None:intergenic | 40.0% |
| ! | TCGTCTCCTATGCCAATTTT+TGG | + | chr7.3:4356386-4356405 | None:intergenic | 40.0% |
| ! | TTGTTTGGAACTTACGGTGT+AGG | - | chr7.3:4357302-4357321 | MS.gene072553:intron | 40.0% |
| !!! | CCGCTTTTTTACCTTGTTTC+AGG | + | chr7.3:4357157-4357176 | None:intergenic | 40.0% |
| AGAACGCGTCATCCAAAAGT+GGG | - | chr7.3:4356940-4356959 | MS.gene072553:intron | 45.0% | |
| AGAGGAACTGGTACGTTGTT+TGG | - | chr7.3:4357287-4357306 | MS.gene072553:intron | 45.0% | |
| AGGGCTCATGGTATATGATG+TGG | - | chr7.3:4357403-4357422 | MS.gene072553:intron | 45.0% | |
| CAGCATCAACAAGAGCAGAT+TGG | + | chr7.3:4357094-4357113 | None:intergenic | 45.0% | |
| CCGTTCAGCTGAAAAATGCA+GGG | - | chr7.3:4356905-4356924 | MS.gene072553:intron | 45.0% | |
| CTATGGTGGTACCTTTACAG+AGG | - | chr7.3:4357256-4357275 | MS.gene072553:intron | 45.0% | |
| CTTACGGTGTAGGTTTCATG+GGG | - | chr7.3:4357312-4357331 | MS.gene072553:intron | 45.0% | |
| GAAAAATGCAGGGAGCTTGT+TGG | - | chr7.3:4356915-4356934 | MS.gene072553:intron | 45.0% | |
| GAGCAAAGGCTTGGAAGATT+TGG | - | chr7.3:4357335-4357354 | MS.gene072553:intron | 45.0% | |
| GTGCATTTCGTGTTGCAGTA+TGG | - | chr7.3:4357434-4357453 | MS.gene072553:CDS | 45.0% | |
| TCATTACCACATCACGACAC+AGG | + | chr7.3:4356752-4356771 | None:intergenic | 45.0% | |
| TCCGTTCAGCTGAAAAATGC+AGG | - | chr7.3:4356904-4356923 | MS.gene072553:intron | 45.0% | |
| TCTGAGGAATCCCTCTGTAA+AGG | + | chr7.3:4357270-4357289 | None:intergenic | 45.0% | |
| TGGAAGTAGAATAGGGCTCA+TGG | - | chr7.3:4357391-4357410 | MS.gene072553:intron | 45.0% | |
| TTACGGTGTAGGTTTCATGG+GGG | - | chr7.3:4357313-4357332 | MS.gene072553:intron | 45.0% | |
| TTCAAAAAAGTCCCATCCGG+AGG | + | chr7.3:4357228-4357247 | None:intergenic | 45.0% | |
| TTTACAGAGGGATTCCTCAG+AGG | - | chr7.3:4357269-4357288 | MS.gene072553:intron | 45.0% | |
| ! | AAAGTGGTTTCCCTAGCTCT+GGG | - | chr7.3:4356825-4356844 | MS.gene072553:intron | 45.0% |
| ! | CTTGTTGATGCTGCTTCACA+GGG | - | chr7.3:4357101-4357120 | MS.gene072553:intron | 45.0% |
| ! | TCTTGTTGATGCTGCTTCAC+AGG | - | chr7.3:4357100-4357119 | MS.gene072553:intron | 45.0% |
| ! | TTAGGGGAGTTTTCCTGATC+AGG | - | chr7.3:4356323-4356342 | MS.gene072553:CDS | 45.0% |
| !! | CCCTGCATTTTTCAGCTGAA+CGG | + | chr7.3:4356908-4356927 | None:intergenic | 45.0% |
| AACAGACCTGTGTCGTGATG+TGG | - | chr7.3:4356743-4356762 | MS.gene072553:intron | 50.0% | |
| ACAACGTACCAGTTCCTCTG+AGG | + | chr7.3:4357286-4357305 | None:intergenic | 50.0% | |
| CAAAGTGGTTTCCCTAGCTC+TGG | - | chr7.3:4356824-4356843 | MS.gene072553:intron | 50.0% | |
| CATCACGACACAGGTCTGTT+TGG | + | chr7.3:4356743-4356762 | None:intergenic | 50.0% | |
| GAGAACGCGTCATCCAAAAG+TGG | - | chr7.3:4356939-4356958 | MS.gene072553:intron | 50.0% | |
| TAGGTTTCATGGGGGAGCAA+AGG | - | chr7.3:4357321-4357340 | MS.gene072553:intron | 50.0% | |
| !! | AGATGATGGGACCTGTGATG+CGG | + | chr7.3:4357205-4357224 | None:intergenic | 50.0% |
| ACAGGTCCCATCATCTCCTC+CGG | - | chr7.3:4357209-4357228 | MS.gene072553:intron | 55.0% | |
| CTCAGGAACGCTAGCATGTG+GGG | - | chr7.3:4356995-4357014 | MS.gene072553:intron | 55.0% | |
| GAGGGATTCCTCAGAGGAAC+TGG | - | chr7.3:4357275-4357294 | MS.gene072553:intron | 55.0% | |
| GCTCAGGAACGCTAGCATGT+GGG | - | chr7.3:4356994-4357013 | MS.gene072553:intron | 55.0% | |
| GGCGAAATTGGCTACCCGTA+AGG | - | chr7.3:4357175-4357194 | MS.gene072553:intron | 55.0% | |
| TCCCATCATCTCCTCCGGAT+GGG | - | chr7.3:4357214-4357233 | MS.gene072553:intron | 55.0% | |
| TCCCATCCGGAGGAGATGAT+GGG | + | chr7.3:4357218-4357237 | None:intergenic | 55.0% | |
| TTCATGGGGGAGCAAAGGCT+TGG | - | chr7.3:4357326-4357345 | MS.gene072553:intron | 55.0% | |
| !! | CTGTGATGCGGTTGGCCTTA+CGG | + | chr7.3:4357193-4357212 | None:intergenic | 55.0% |
| !! | TGTGATGCGGTTGGCCTTAC+GGG | + | chr7.3:4357192-4357211 | None:intergenic | 55.0% |
| CGTAAGGCCAACCGCATCAC+AGG | - | chr7.3:4357191-4357210 | MS.gene072553:intron | 60.0% | |
| GATGGGACCTGTGATGCGGT+TGG | + | chr7.3:4357201-4357220 | None:intergenic | 60.0% | |
| GGCTCAGGAACGCTAGCATG+TGG | - | chr7.3:4356993-4357012 | MS.gene072553:intron | 60.0% | |
| GTCCCATCATCTCCTCCGGA+TGG | - | chr7.3:4357213-4357232 | MS.gene072553:intron | 60.0% | |
| GTCCCATCCGGAGGAGATGA+TGG | + | chr7.3:4357219-4357238 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 4356144 | 4357478 | 4356144 | ID=MS.gene072553 |
| chr7.3 | mRNA | 4356144 | 4357478 | 4356144 | ID=MS.gene072553.t1;Parent=MS.gene072553 |
| chr7.3 | exon | 4357409 | 4357478 | 4357409 | ID=MS.gene072553.t1.exon1;Parent=MS.gene072553.t1 |
| chr7.3 | CDS | 4357409 | 4357478 | 4357409 | ID=cds.MS.gene072553.t1;Parent=MS.gene072553.t1 |
| chr7.3 | exon | 4356144 | 4356709 | 4356144 | ID=MS.gene072553.t1.exon2;Parent=MS.gene072553.t1 |
| chr7.3 | CDS | 4356144 | 4356709 | 4356144 | ID=cds.MS.gene072553.t1;Parent=MS.gene072553.t1 |
| Gene Sequence |
| Protein sequence |
