Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057194.t1 | XP_003602304.1 | 98.4 | 129 | 2 | 0 | 1 | 129 | 34 | 162 | 5.80E-66 | 260 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057194.t1 | G7J857 | 98.4 | 129 | 2 | 0 | 1 | 129 | 34 | 162 | 4.2e-66 | 260.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049378 | MS.gene057194 | 0.824859 | 6.42E-54 | -1.69E-46 |
MS.gene050442 | MS.gene057194 | 0.821509 | 3.89E-53 | -1.69E-46 |
MS.gene050719 | MS.gene057194 | 0.802375 | 5.78E-49 | -1.69E-46 |
MS.gene050721 | MS.gene057194 | 0.800928 | 1.14E-48 | -1.69E-46 |
MS.gene050750 | MS.gene057194 | 0.819755 | 9.83E-53 | -1.69E-46 |
MS.gene050826 | MS.gene057194 | 0.817596 | 3.04E-52 | -1.69E-46 |
MS.gene050953 | MS.gene057194 | 0.825706 | 4.05E-54 | -1.69E-46 |
MS.gene052333 | MS.gene057194 | 0.811528 | 6.69E-51 | -1.69E-46 |
MS.gene052426 | MS.gene057194 | 0.824409 | 8.20E-54 | -1.69E-46 |
MS.gene052464 | MS.gene057194 | 0.81797 | 2.50E-52 | -1.69E-46 |
MS.gene052674 | MS.gene057194 | 0.802374 | 5.78E-49 | -1.69E-46 |
MS.gene052677 | MS.gene057194 | 0.806615 | 7.55E-50 | -1.69E-46 |
MS.gene053201 | MS.gene057194 | 0.813629 | 2.32E-51 | -1.69E-46 |
MS.gene053584 | MS.gene057194 | 0.825586 | 4.32E-54 | -1.69E-46 |
MS.gene05414 | MS.gene057194 | 0.803659 | 3.14E-49 | -1.69E-46 |
MS.gene054236 | MS.gene057194 | 0.806405 | 8.36E-50 | -1.69E-46 |
MS.gene054405 | MS.gene057194 | 0.81739 | 3.38E-52 | -1.69E-46 |
MS.gene054930 | MS.gene057194 | 0.84106 | 5.97E-58 | -1.69E-46 |
MS.gene05510 | MS.gene057194 | 0.814088 | 1.84E-51 | -1.69E-46 |
MS.gene055701 | MS.gene057194 | 0.850942 | 1.22E-60 | -1.69E-46 |
MS.gene056506 | MS.gene057194 | 0.812767 | 3.59E-51 | -1.69E-46 |
MS.gene056873 | MS.gene057194 | 0.83123 | 1.88E-55 | -1.69E-46 |
MS.gene057194 | MS.gene05761 | 0.84829 | 6.73E-60 | -1.69E-46 |
MS.gene057194 | MS.gene058146 | 0.80298 | 4.34E-49 | -1.69E-46 |
MS.gene057194 | MS.gene059128 | 0.80083 | 1.20E-48 | -1.69E-46 |
MS.gene057194 | MS.gene059283 | 0.807145 | 5.83E-50 | -1.69E-46 |
MS.gene057194 | MS.gene060011 | 0.844506 | 7.25E-59 | -1.69E-46 |
MS.gene057194 | MS.gene060167 | 0.801486 | 8.80E-49 | -1.69E-46 |
MS.gene057194 | MS.gene060322 | 0.840391 | 8.94E-58 | -1.69E-46 |
MS.gene057194 | MS.gene06052 | 0.800427 | 1.45E-48 | -1.69E-46 |
MS.gene057194 | MS.gene060683 | 0.808519 | 2.98E-50 | -1.69E-46 |
MS.gene057194 | MS.gene060685 | 0.810923 | 9.05E-51 | -1.69E-46 |
MS.gene057194 | MS.gene060879 | 0.800279 | 1.55E-48 | -1.69E-46 |
MS.gene057194 | MS.gene060998 | 0.82425 | 8.94E-54 | -1.69E-46 |
MS.gene057194 | MS.gene061343 | 0.802496 | 5.46E-49 | -1.69E-46 |
MS.gene057194 | MS.gene06344 | 0.81015 | 1.33E-50 | -1.69E-46 |
MS.gene057194 | MS.gene064460 | 0.804446 | 2.15E-49 | -1.69E-46 |
MS.gene057194 | MS.gene066206 | 0.809886 | 1.52E-50 | -1.69E-46 |
MS.gene057194 | MS.gene06657 | 0.955596 | 2.10E-113 | -1.69E-46 |
MS.gene057194 | MS.gene06698 | 0.808406 | 3.15E-50 | -1.69E-46 |
MS.gene057194 | MS.gene068225 | 0.810414 | 1.17E-50 | -1.69E-46 |
MS.gene057194 | MS.gene068388 | 0.812464 | 4.18E-51 | -1.69E-46 |
MS.gene057194 | MS.gene06871 | 0.958749 | 1.09E-116 | -1.69E-46 |
MS.gene057194 | MS.gene068950 | 0.801143 | 1.03E-48 | -1.69E-46 |
MS.gene057194 | MS.gene068987 | 0.825879 | 3.68E-54 | -1.69E-46 |
MS.gene057194 | MS.gene069554 | 0.842831 | 2.03E-58 | -1.69E-46 |
MS.gene057194 | MS.gene069555 | 0.817278 | 3.58E-52 | -1.69E-46 |
MS.gene057194 | MS.gene069868 | -0.813149 | 2.96E-51 | -1.69E-46 |
MS.gene057194 | MS.gene071551 | 0.802415 | 5.67E-49 | -1.69E-46 |
MS.gene057194 | MS.gene072397 | -0.81177 | 5.93E-51 | -1.69E-46 |
MS.gene057194 | MS.gene072553 | 0.839189 | 1.84E-57 | -1.69E-46 |
MS.gene057194 | MS.gene072624 | 0.801561 | 8.50E-49 | -1.69E-46 |
MS.gene057194 | MS.gene072630 | 0.801565 | 8.48E-49 | -1.69E-46 |
MS.gene057194 | MS.gene073008 | 0.809249 | 2.08E-50 | -1.69E-46 |
MS.gene057194 | MS.gene073428 | 0.810084 | 1.37E-50 | -1.69E-46 |
MS.gene057194 | MS.gene07344 | 0.801474 | 8.85E-49 | -1.69E-46 |
MS.gene057194 | MS.gene073460 | 0.839698 | 1.36E-57 | -1.69E-46 |
MS.gene057194 | MS.gene07536 | 0.81067 | 1.03E-50 | -1.69E-46 |
MS.gene057194 | MS.gene20184 | 0.817924 | 2.56E-52 | -1.69E-46 |
MS.gene057194 | MS.gene20558 | 0.809257 | 2.07E-50 | -1.69E-46 |
MS.gene057194 | MS.gene20635 | 0.809238 | 2.09E-50 | -1.69E-46 |
MS.gene057194 | MS.gene22091 | 0.80321 | 3.89E-49 | -1.69E-46 |
MS.gene057194 | MS.gene22731 | 0.80265 | 5.07E-49 | -1.69E-46 |
MS.gene057194 | MS.gene23103 | 0.818048 | 2.40E-52 | -1.69E-46 |
MS.gene057194 | MS.gene23945 | 0.848215 | 7.06E-60 | -1.69E-46 |
MS.gene057194 | MS.gene24288 | 0.814782 | 1.29E-51 | -1.69E-46 |
MS.gene057194 | MS.gene24642 | 0.813341 | 2.69E-51 | -1.69E-46 |
MS.gene057194 | MS.gene25151 | 0.826604 | 2.48E-54 | -1.69E-46 |
MS.gene057194 | MS.gene25201 | 0.802612 | 5.16E-49 | -1.69E-46 |
MS.gene057194 | MS.gene26485 | 0.807796 | 4.24E-50 | -1.69E-46 |
MS.gene057194 | MS.gene27008 | 0.805738 | 1.15E-49 | -1.69E-46 |
MS.gene057194 | MS.gene27164 | 0.800604 | 1.33E-48 | -1.69E-46 |
MS.gene057194 | MS.gene27271 | 0.840231 | 9.85E-58 | -1.69E-46 |
MS.gene057194 | MS.gene27381 | 0.83167 | 1.46E-55 | -1.69E-46 |
MS.gene057194 | MS.gene28862 | 0.819717 | 1.00E-52 | -1.69E-46 |
MS.gene057194 | MS.gene29000 | 0.838233 | 3.25E-57 | -1.69E-46 |
MS.gene057194 | MS.gene29086 | 0.824137 | 9.50E-54 | -1.69E-46 |
MS.gene057194 | MS.gene29405 | 0.817402 | 3.36E-52 | -1.69E-46 |
MS.gene057194 | MS.gene29986 | 0.838792 | 2.33E-57 | -1.69E-46 |
MS.gene057194 | MS.gene31116 | 0.830846 | 2.33E-55 | -1.69E-46 |
MS.gene057194 | MS.gene31283 | 0.844927 | 5.58E-59 | -1.69E-46 |
MS.gene057194 | MS.gene32231 | 0.808772 | 2.63E-50 | -1.69E-46 |
MS.gene057194 | MS.gene32874 | 0.807963 | 3.91E-50 | -1.69E-46 |
MS.gene057194 | MS.gene34085 | 0.807437 | 5.06E-50 | -1.69E-46 |
MS.gene057194 | MS.gene34667 | 0.836757 | 7.76E-57 | -1.69E-46 |
MS.gene057194 | MS.gene35408 | 0.835819 | 1.34E-56 | -1.69E-46 |
MS.gene057194 | MS.gene35822 | 0.837429 | 5.22E-57 | -1.69E-46 |
MS.gene057194 | MS.gene35823 | 0.840045 | 1.10E-57 | -1.69E-46 |
MS.gene057194 | MS.gene35824 | 0.831343 | 1.76E-55 | -1.69E-46 |
MS.gene057194 | MS.gene35864 | 0.836701 | 8.02E-57 | -1.69E-46 |
MS.gene057194 | MS.gene35867 | 0.823859 | 1.10E-53 | -1.69E-46 |
MS.gene057194 | MS.gene36061 | 0.801465 | 8.89E-49 | -1.69E-46 |
MS.gene057194 | MS.gene36231 | 0.801934 | 7.12E-49 | -1.69E-46 |
MS.gene057194 | MS.gene36242 | 0.806735 | 7.12E-50 | -1.69E-46 |
MS.gene057194 | MS.gene37312 | 0.815814 | 7.62E-52 | -1.69E-46 |
MS.gene057194 | MS.gene40006 | 0.811702 | 6.13E-51 | -1.69E-46 |
MS.gene057194 | MS.gene40946 | 0.801821 | 7.51E-49 | -1.69E-46 |
MS.gene057194 | MS.gene41424 | 0.805084 | 1.58E-49 | -1.69E-46 |
MS.gene057194 | MS.gene43040 | 0.818762 | 1.65E-52 | -1.69E-46 |
MS.gene057194 | MS.gene43459 | 0.805174 | 1.52E-49 | -1.69E-46 |
MS.gene057194 | MS.gene45193 | 0.80326 | 3.79E-49 | -1.69E-46 |
MS.gene057194 | MS.gene45422 | 0.832258 | 1.05E-55 | -1.69E-46 |
MS.gene057194 | MS.gene49665 | 0.801908 | 7.21E-49 | -1.69E-46 |
MS.gene057194 | MS.gene49940 | 0.821381 | 4.16E-53 | -1.69E-46 |
MS.gene057194 | MS.gene51650 | 0.800087 | 1.70E-48 | -1.69E-46 |
MS.gene057194 | MS.gene52059 | 0.824403 | 8.23E-54 | -1.69E-46 |
MS.gene057194 | MS.gene52061 | 0.817511 | 3.17E-52 | -1.69E-46 |
MS.gene057194 | MS.gene52448 | 0.824195 | 9.21E-54 | -1.69E-46 |
MS.gene057194 | MS.gene52512 | 0.80591 | 1.06E-49 | -1.69E-46 |
MS.gene057194 | MS.gene52525 | 0.806443 | 8.21E-50 | -1.69E-46 |
MS.gene057194 | MS.gene53319 | 0.818625 | 1.78E-52 | -1.69E-46 |
MS.gene057194 | MS.gene53368 | 0.826411 | 2.75E-54 | -1.69E-46 |
MS.gene057194 | MS.gene53771 | 0.83842 | 2.91E-57 | -1.69E-46 |
MS.gene057194 | MS.gene53861 | -0.806937 | 6.45E-50 | -1.69E-46 |
MS.gene057194 | MS.gene54512 | 0.811968 | 5.37E-51 | -1.69E-46 |
MS.gene057194 | MS.gene55175 | 0.819536 | 1.10E-52 | -1.69E-46 |
MS.gene057194 | MS.gene55717 | 0.82698 | 2.01E-54 | -1.69E-46 |
MS.gene057194 | MS.gene55718 | 0.838227 | 3.26E-57 | -1.69E-46 |
MS.gene057194 | MS.gene56290 | 0.833045 | 6.68E-56 | -1.69E-46 |
MS.gene057194 | MS.gene56431 | 0.8242 | 9.18E-54 | -1.69E-46 |
MS.gene057194 | MS.gene57469 | 0.840947 | 6.40E-58 | -1.69E-46 |
MS.gene057194 | MS.gene58686 | 0.829236 | 5.76E-55 | -1.69E-46 |
MS.gene057194 | MS.gene59282 | 0.838507 | 2.76E-57 | -1.69E-46 |
MS.gene057194 | MS.gene60343 | 0.801573 | 8.45E-49 | -1.69E-46 |
MS.gene057194 | MS.gene60903 | 0.819366 | 1.21E-52 | -1.69E-46 |
MS.gene057194 | MS.gene61206 | 0.804317 | 2.29E-49 | -1.69E-46 |
MS.gene057194 | MS.gene61435 | 0.810683 | 1.02E-50 | -1.69E-46 |
MS.gene057194 | MS.gene62587 | 0.809086 | 2.25E-50 | -1.69E-46 |
MS.gene057194 | MS.gene63058 | 0.832788 | 7.74E-56 | -1.69E-46 |
MS.gene057194 | MS.gene63412 | 0.801892 | 7.27E-49 | -1.69E-46 |
MS.gene057194 | MS.gene63984 | 0.815541 | 8.77E-52 | -1.69E-46 |
MS.gene057194 | MS.gene64029 | 0.833545 | 5.02E-56 | -1.69E-46 |
MS.gene057194 | MS.gene64853 | 0.806442 | 8.21E-50 | -1.69E-46 |
MS.gene057194 | MS.gene64854 | 0.810885 | 9.23E-51 | -1.69E-46 |
MS.gene057194 | MS.gene65402 | 0.80841 | 3.14E-50 | -1.69E-46 |
MS.gene057194 | MS.gene66049 | 0.81311 | 3.02E-51 | -1.69E-46 |
MS.gene057194 | MS.gene67105 | 0.802439 | 5.61E-49 | -1.69E-46 |
MS.gene057194 | MS.gene67220 | 0.812405 | 4.31E-51 | -1.69E-46 |
MS.gene057194 | MS.gene68333 | 0.805731 | 1.16E-49 | -1.69E-46 |
MS.gene057194 | MS.gene69794 | 0.839323 | 1.70E-57 | -1.69E-46 |
MS.gene057194 | MS.gene71871 | 0.809474 | 1.86E-50 | -1.69E-46 |
MS.gene057194 | MS.gene73332 | 0.822074 | 2.88E-53 | -1.69E-46 |
MS.gene057194 | MS.gene73820 | 0.837737 | 4.36E-57 | -1.69E-46 |
MS.gene057194 | MS.gene76347 | 0.810722 | 1.00E-50 | -1.69E-46 |
MS.gene057194 | MS.gene76356 | 0.800797 | 1.22E-48 | -1.69E-46 |
MS.gene057194 | MS.gene76533 | -0.807268 | 5.49E-50 | -1.69E-46 |
MS.gene057194 | MS.gene76949 | 0.817411 | 3.34E-52 | -1.69E-46 |
MS.gene057194 | MS.gene77208 | 0.809538 | 1.80E-50 | -1.69E-46 |
MS.gene057194 | MS.gene78166 | 0.811079 | 8.37E-51 | -1.69E-46 |
MS.gene057194 | MS.gene80298 | 0.809969 | 1.45E-50 | -1.69E-46 |
MS.gene057194 | MS.gene80641 | 0.816663 | 4.92E-52 | -1.69E-46 |
MS.gene057194 | MS.gene83082 | 0.801764 | 7.72E-49 | -1.69E-46 |
MS.gene057194 | MS.gene83623 | 0.801135 | 1.04E-48 | -1.69E-46 |
MS.gene057194 | MS.gene84326 | 0.841622 | 4.25E-58 | -1.69E-46 |
MS.gene057194 | MS.gene84812 | 0.810512 | 1.11E-50 | -1.69E-46 |
MS.gene057194 | MS.gene85149 | -0.813699 | 2.24E-51 | -1.69E-46 |
MS.gene057194 | MS.gene85520 | 0.801587 | 8.39E-49 | -1.69E-46 |
MS.gene057194 | MS.gene87115 | 0.800509 | 1.39E-48 | -1.69E-46 |
MS.gene057194 | MS.gene87170 | 0.838137 | 3.44E-57 | -1.69E-46 |
MS.gene057194 | MS.gene87264 | 0.801298 | 9.62E-49 | -1.69E-46 |
MS.gene057194 | MS.gene88713 | -0.81847 | 1.93E-52 | -1.69E-46 |
MS.gene057194 | MS.gene89060 | 0.800328 | 1.52E-48 | -1.69E-46 |
MS.gene057194 | MS.gene89108 | 0.803298 | 3.73E-49 | -1.69E-46 |
MS.gene057194 | MS.gene89438 | 0.803365 | 3.61E-49 | -1.69E-46 |
MS.gene057194 | MS.gene90411 | 0.806262 | 8.96E-50 | -1.69E-46 |
MS.gene057194 | MS.gene90525 | 0.801059 | 1.08E-48 | -1.69E-46 |
MS.gene057194 | MS.gene90882 | 0.80193 | 7.13E-49 | -1.69E-46 |
MS.gene057194 | MS.gene91005 | 0.801343 | 9.42E-49 | -1.69E-46 |
MS.gene057194 | MS.gene93041 | 0.815245 | 1.02E-51 | -1.69E-46 |
MS.gene057194 | MS.gene93622 | 0.805783 | 1.13E-49 | -1.69E-46 |
MS.gene057194 | MS.gene95070 | 0.804324 | 2.28E-49 | -1.69E-46 |
MS.gene057194 | MS.gene95697 | 0.834751 | 2.50E-56 | -1.69E-46 |
MS.gene057194 | MS.gene97270 | 0.808431 | 3.11E-50 | -1.69E-46 |
MS.gene057194 | MS.gene97782 | 0.805116 | 1.56E-49 | -1.69E-46 |
MS.gene057194 | MS.gene98959 | 0.80687 | 6.67E-50 | -1.69E-46 |
MS.gene057194 | MS.gene99802 | 0.815899 | 7.30E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057194.t1 | MTR_3g092020 | 98.450 | 129 | 2 | 0 | 1 | 129 | 34 | 162 | 6.30e-91 | 260 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 17 sgRNAs with CRISPR-Local
Find 48 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCCCCATCTCTCCTTAAAA+AGG | 0.245866 | 3.2:-77493274 | None:intergenic |
CTCCTCTTGGTTCAAAATCA+TGG | 0.393681 | 3.2:+77493318 | MS.gene057194:CDS |
GAGATCATGTCGAGGAATCT+TGG | 0.402090 | 3.2:+77493972 | MS.gene057194:CDS |
TGGCCTCGGACAATGCTCTA+TGG | 0.432233 | 3.2:+77493246 | MS.gene057194:CDS |
TTATATCACACGGCTGCGTT+TGG | 0.432650 | 3.2:-77494043 | None:intergenic |
GGTGAGGTACAACGATATCT+AGG | 0.477811 | 3.2:+77493865 | MS.gene057194:CDS |
AGTTCAGAAACAGACTTCAC+TGG | 0.488792 | 3.2:+77493928 | MS.gene057194:CDS |
GAAGTGGAAGCTCATGGCCT+CGG | 0.508465 | 3.2:+77493232 | None:intergenic |
GGTTTGAAGATTGTTAGAGA+AGG | 0.530829 | 3.2:+77493817 | MS.gene057194:CDS |
ATCATGGAAAGAAGTGTATG+AGG | 0.545115 | 3.2:+77493334 | MS.gene057194:CDS |
CAAGATCGATGCGATCGAGT+TGG | 0.561970 | 3.2:+77493359 | MS.gene057194:CDS |
GATATCGTTGTACCTCACCT+TGG | 0.640965 | 3.2:-77493861 | None:intergenic |
CTATCTTGTTCACCAAGGTG+AGG | 0.666547 | 3.2:+77493849 | MS.gene057194:CDS |
GTAGAGATGGTTATATCACA+CGG | 0.677630 | 3.2:-77494053 | None:intergenic |
TGACCATAGAGCATTGTCCG+AGG | 0.683112 | 3.2:-77493249 | None:intergenic |
GCTGAAGAGAGATCATGTCG+AGG | 0.706201 | 3.2:+77493964 | MS.gene057194:CDS |
GACTACTATCTTGTTCACCA+AGG | 0.711703 | 3.2:+77493844 | MS.gene057194:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTATTAATTAATAATAATTT+TGG | + | chr3.2:77493547-77493566 | MS.gene057194:intron | 0.0% |
!!! | TTTTAGAAGAAAAAAAATAT+GGG | - | chr3.2:77493576-77493595 | None:intergenic | 10.0% |
!!! | ACAAAATTCTTTTTTTCATT+GGG | + | chr3.2:77493995-77494014 | MS.gene057194:CDS | 15.0% |
!!! | ATAATTTGTTATGTTGAATA+TGG | - | chr3.2:77493681-77493700 | None:intergenic | 15.0% |
!!! | GTTTTAGAAGAAAAAAAATA+TGG | - | chr3.2:77493577-77493596 | None:intergenic | 15.0% |
!!! | TTTTAATTCTTCACAAAATA+GGG | + | chr3.2:77493795-77493814 | MS.gene057194:intron | 15.0% |
!!! | TTTTTAATTCTTCACAAAAT+AGG | + | chr3.2:77493794-77493813 | MS.gene057194:intron | 15.0% |
!! | TTTAATTCTTCACAAAATAG+GGG | + | chr3.2:77493796-77493815 | MS.gene057194:intron | 20.0% |
!!! | CAAAATTCTTTTTTTCATTG+GGG | + | chr3.2:77493996-77494015 | MS.gene057194:CDS | 20.0% |
!!! | GACAAAATTCTTTTTTTCAT+TGG | + | chr3.2:77493994-77494013 | MS.gene057194:CDS | 20.0% |
! | AAAATCTCCTTCAATAATCA+TGG | - | chr3.2:77493467-77493486 | None:intergenic | 25.0% |
! | ATCTAGGTTCAAGAAAAAAT+CGG | + | chr3.2:77493881-77493900 | MS.gene057194:CDS | 25.0% |
! | TTAAATGCCATGATTATTGA+AGG | + | chr3.2:77493457-77493476 | MS.gene057194:intron | 25.0% |
TTATTGAACTCTGACACAAA+GGG | + | chr3.2:77493764-77493783 | MS.gene057194:intron | 30.0% | |
TTTCTGCACACTTATAACAT+TGG | + | chr3.2:77493611-77493630 | MS.gene057194:intron | 30.0% | |
! | TCTATGGTCAAACCTTTTTA+AGG | + | chr3.2:77493262-77493281 | MS.gene057194:CDS | 30.0% |
!! | AAACCTTTTTAAGGAGAGAT+GGG | + | chr3.2:77493271-77493290 | MS.gene057194:CDS | 30.0% |
!!! | TCTTTTTTTCATTGGGGATT+TGG | + | chr3.2:77494002-77494021 | MS.gene057194:CDS | 30.0% |
ATAATTGCAAGCGTGTGATT+AGG | - | chr3.2:77493501-77493520 | None:intergenic | 35.0% | |
ATTATTCTTGTCCCTTGAGA+TGG | + | chr3.2:77493516-77493535 | MS.gene057194:intron | 35.0% | |
CACACTTATAACATTGGTGT+TGG | + | chr3.2:77493617-77493636 | MS.gene057194:intron | 35.0% | |
CTAAAGCAAATCCAAGTAAG+AGG | - | chr3.2:77493646-77493665 | None:intergenic | 35.0% | |
CTTATTGAACTCTGACACAA+AGG | + | chr3.2:77493763-77493782 | MS.gene057194:intron | 35.0% | |
GGTTTGAAGATTGTTAGAGA+AGG | + | chr3.2:77493817-77493836 | MS.gene057194:CDS | 35.0% | |
! | ATAATTTTCACGCCATCTCA+AGG | - | chr3.2:77493531-77493550 | None:intergenic | 35.0% |
! | ATCATGGAAAGAAGTGTATG+AGG | + | chr3.2:77493334-77493353 | MS.gene057194:CDS | 35.0% |
! | TAATTTTCACGCCATCTCAA+GGG | - | chr3.2:77493530-77493549 | None:intergenic | 35.0% |
! | TTCCATGATTTTGAACCAAG+AGG | - | chr3.2:77493323-77493342 | None:intergenic | 35.0% |
!! | AACCTTTTTAAGGAGAGATG+GGG | + | chr3.2:77493272-77493291 | MS.gene057194:CDS | 35.0% |
!! | CAAACCTTTTTAAGGAGAGA+TGG | + | chr3.2:77493270-77493289 | MS.gene057194:CDS | 35.0% |
AAAAATCGGCGACAAGTATC+TGG | + | chr3.2:77493895-77493914 | MS.gene057194:CDS | 40.0% | |
AGTTCAGAAACAGACTTCAC+TGG | + | chr3.2:77493928-77493947 | MS.gene057194:CDS | 40.0% | |
CTCCTCTTGGTTCAAAATCA+TGG | + | chr3.2:77493318-77493337 | MS.gene057194:CDS | 40.0% | |
GACTACTATCTTGTTCACCA+AGG | + | chr3.2:77493844-77493863 | MS.gene057194:CDS | 40.0% | |
TTACTCTGCTGAGAGTAGTA+CGG | + | chr3.2:77493399-77493418 | MS.gene057194:intron | 40.0% | |
CTATCTTGTTCACCAAGGTG+AGG | + | chr3.2:77493849-77493868 | MS.gene057194:CDS | 45.0% | |
CTCCCCATCTCTCCTTAAAA+AGG | - | chr3.2:77493277-77493296 | None:intergenic | 45.0% | |
GAGATCATGTCGAGGAATCT+TGG | + | chr3.2:77493972-77493991 | MS.gene057194:CDS | 45.0% | |
GATATCGTTGTACCTCACCT+TGG | - | chr3.2:77493864-77493883 | None:intergenic | 45.0% | |
GGTGAGGTACAACGATATCT+AGG | + | chr3.2:77493865-77493884 | MS.gene057194:CDS | 45.0% | |
TTATATCACACGGCTGCGTT+TGG | - | chr3.2:77494046-77494065 | None:intergenic | 45.0% | |
!! | CTTTTTAAGGAGAGATGGGG+AGG | + | chr3.2:77493275-77493294 | MS.gene057194:CDS | 45.0% |
!!! | GCTGCTTTTTATGCTCCTCT+TGG | + | chr3.2:77493305-77493324 | MS.gene057194:CDS | 45.0% |
CAAGATCGATGCGATCGAGT+TGG | + | chr3.2:77493359-77493378 | MS.gene057194:CDS | 50.0% | |
GCTGAAGAGAGATCATGTCG+AGG | + | chr3.2:77493964-77493983 | MS.gene057194:CDS | 50.0% | |
!! | GGTGTTGGCTTCCTCTTACT+TGG | + | chr3.2:77493632-77493651 | MS.gene057194:intron | 50.0% |
!! | TGACCATAGAGCATTGTCCG+AGG | - | chr3.2:77493252-77493271 | None:intergenic | 50.0% |
TGGCCTCGGACAATGCTCTA+TGG | + | chr3.2:77493246-77493265 | MS.gene057194:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 77493245 | 77494065 | 77493245 | ID=MS.gene057194 |
chr3.2 | mRNA | 77493245 | 77494065 | 77493245 | ID=MS.gene057194.t1;Parent=MS.gene057194 |
chr3.2 | exon | 77493245 | 77493384 | 77493245 | ID=MS.gene057194.t1.exon1;Parent=MS.gene057194.t1 |
chr3.2 | CDS | 77493245 | 77493384 | 77493245 | ID=cds.MS.gene057194.t1;Parent=MS.gene057194.t1 |
chr3.2 | exon | 77493816 | 77494065 | 77493816 | ID=MS.gene057194.t1.exon2;Parent=MS.gene057194.t1 |
chr3.2 | CDS | 77493816 | 77494065 | 77493816 | ID=cds.MS.gene057194.t1;Parent=MS.gene057194.t1 |
Gene Sequence |
Protein sequence |