Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072986.t1 | XP_003603508.2 | 94.6 | 425 | 23 | 0 | 6 | 430 | 34 | 458 | 9.30E-185 | 656.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072986.t1 | F4IDY7 | 44.3 | 296 | 160 | 4 | 6 | 299 | 141 | 433 | 1.3e-62 | 241.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072986.t1 | G7JCA6 | 94.6 | 425 | 23 | 0 | 6 | 430 | 34 | 458 | 6.7e-185 | 656.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene072986 | 0.803674 | 3.12E-49 | -1.69E-46 |
| MS.gene05364 | MS.gene072986 | 0.808927 | 2.44E-50 | -1.69E-46 |
| MS.gene053931 | MS.gene072986 | 0.816181 | 6.31E-52 | -1.69E-46 |
| MS.gene057208 | MS.gene072986 | 0.800518 | 1.39E-48 | -1.69E-46 |
| MS.gene058010 | MS.gene072986 | 0.802074 | 6.67E-49 | -1.69E-46 |
| MS.gene058292 | MS.gene072986 | 0.809245 | 2.08E-50 | -1.69E-46 |
| MS.gene059842 | MS.gene072986 | 0.801373 | 9.29E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072986.t1 | MTR_3g108410 | 94.824 | 425 | 22 | 0 | 6 | 430 | 34 | 458 | 0.0 | 800 |
| MS.gene072986.t1 | MTR_4g107390 | 43.333 | 300 | 161 | 4 | 6 | 299 | 132 | 428 | 1.89e-81 | 266 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072986.t1 | AT5G25580 | 40.441 | 408 | 181 | 13 | 6 | 410 | 56 | 404 | 2.00e-81 | 256 |
| MS.gene072986.t1 | AT1G18950 | 44.257 | 296 | 160 | 4 | 6 | 299 | 141 | 433 | 1.34e-78 | 258 |
| MS.gene072986.t1 | AT1G18950 | 44.257 | 296 | 160 | 4 | 6 | 299 | 141 | 433 | 1.61e-78 | 258 |
| MS.gene072986.t1 | AT1G18950 | 44.257 | 296 | 160 | 4 | 6 | 299 | 141 | 433 | 1.67e-78 | 258 |
Find 98 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAGTCAAACCCATGCTTTC+TGG | 0.107105 | 3.3:-88582009 | None:intergenic |
| TTCGGTGATTCGTGTGATTC+AGG | 0.193742 | 3.3:+88578101 | MS.gene072986:CDS |
| AGATTCTATGGCAGTATTTC+GGG | 0.220624 | 3.3:-88582058 | None:intergenic |
| CCGATCCTCTGTTTCTATCT+TGG | 0.238076 | 3.3:-88581750 | None:intergenic |
| GTCTCGTGTTGAGGTTTCTA+TGG | 0.263941 | 3.3:+88580328 | MS.gene072986:CDS |
| CAGACAGTGATGATTCTAAA+AGG | 0.266844 | 3.3:+88581800 | MS.gene072986:CDS |
| TAGATTCTATGGCAGTATTT+CGG | 0.272600 | 3.3:-88582059 | None:intergenic |
| AGGCCTATTAATTACAGTTT+TGG | 0.281092 | 3.3:+88580602 | MS.gene072986:CDS |
| TTACCAAAACTGTAATTAAT+AGG | 0.297695 | 3.3:-88580605 | None:intergenic |
| CACTGCACGAGTCTGATAAA+TGG | 0.299275 | 3.3:+88579300 | MS.gene072986:CDS |
| TTACTAGAGCGAACCCCTTT+TGG | 0.327324 | 3.3:-88581955 | None:intergenic |
| CTTTGCGAAAAGAAGAAATC+TGG | 0.329382 | 3.3:-88579921 | None:intergenic |
| TTCAGAAAATTCGTCTAGAT+TGG | 0.339620 | 3.3:-88580194 | None:intergenic |
| AGCTTATGATCGAACAATTA+AGG | 0.353605 | 3.3:+88581305 | MS.gene072986:CDS |
| TCAACTTGGTACCCTTTAGA+TGG | 0.359369 | 3.3:-88579492 | None:intergenic |
| CAACCTTTGCCCTTACGGTT+TGG | 0.368801 | 3.3:-88580133 | None:intergenic |
| TTTCTATCTTGGTCAGCAGC+AGG | 0.391780 | 3.3:-88581739 | None:intergenic |
| TCCGATTCATCCTCTGAATC+AGG | 0.392591 | 3.3:-88582090 | None:intergenic |
| GCATCATCACTCTCGGATAT+AGG | 0.394140 | 3.3:-88581832 | None:intergenic |
| AGGAACAACAGTAGATTCTA+TGG | 0.395705 | 3.3:-88582070 | None:intergenic |
| CACGCTCTTGTCGCACTAGA+AGG | 0.397054 | 3.3:+88580582 | MS.gene072986:CDS |
| AGGTTAGCAAGAGAAGCATT+AGG | 0.402729 | 3.3:-88578192 | None:intergenic |
| CAGGTGTTTAGTCCATTACT+TGG | 0.411796 | 3.3:+88578120 | MS.gene072986:CDS |
| ATTAATGATGCTTTAAAAGA+AGG | 0.414751 | 3.3:+88579895 | MS.gene072986:CDS |
| GAATGATGAACATGCGAGTC+AGG | 0.418640 | 3.3:+88581891 | MS.gene072986:CDS |
| AGTGTTTCCCATTGGAAGTT+GGG | 0.420599 | 3.3:-88580166 | None:intergenic |
| CCATGCTTTCTGGAACAGTA+TGG | 0.428988 | 3.3:-88581999 | None:intergenic |
| CATGCAGTTTCTTATCCAAA+AGG | 0.435630 | 3.3:+88581940 | MS.gene072986:CDS |
| CGCTCTAGTAAGCGGATAGC+TGG | 0.435706 | 3.3:+88581967 | MS.gene072986:CDS |
| ATTACTTGGTAATGATTTGA+AGG | 0.436043 | 3.3:+88578134 | MS.gene072986:CDS |
| CTCTTTGCTTTAGGTTGCTG+AGG | 0.438103 | 3.3:+88579452 | MS.gene072986:intron |
| ATGGAACTCGCACATCCTAT+TGG | 0.441354 | 3.3:+88579959 | MS.gene072986:CDS |
| ATAAACAACCTTTGCCCTTA+CGG | 0.444399 | 3.3:-88580138 | None:intergenic |
| TTCTATCTTGGTCAGCAGCA+GGG | 0.447697 | 3.3:-88581738 | None:intergenic |
| ATCACTTCCCAACTTCCAAT+GGG | 0.461770 | 3.3:+88580159 | MS.gene072986:CDS |
| TCGTGCAGTGCTTTACCAAC+AGG | 0.461929 | 3.3:-88579287 | None:intergenic |
| GTACAAGGAGCTTGATCCAT+TGG | 0.462789 | 3.3:+88579602 | MS.gene072986:CDS |
| ATGCAGTTTCTTATCCAAAA+GGG | 0.465191 | 3.3:+88581941 | MS.gene072986:CDS |
| GAGTCCGATCTCAATTTCTT+CGG | 0.467046 | 3.3:-88578163 | None:intergenic |
| AATCCACTTGTACCATCTAA+AGG | 0.467332 | 3.3:+88579480 | MS.gene072986:CDS |
| TCCTGATTCAGAGGATGAAT+CGG | 0.475091 | 3.3:+88582089 | MS.gene072986:CDS |
| ATCCACTTGTACCATCTAAA+GGG | 0.476344 | 3.3:+88579481 | MS.gene072986:CDS |
| TATCACTTCCCAACTTCCAA+TGG | 0.483417 | 3.3:+88580158 | MS.gene072986:CDS |
| CCTTCAAAATTTGAATGTGA+AGG | 0.493913 | 3.3:-88578212 | None:intergenic |
| AGAAAATTCGTCTAGATTGG+AGG | 0.493921 | 3.3:-88580191 | None:intergenic |
| ACTGCACGAGTCTGATAAAT+GGG | 0.494757 | 3.3:+88579301 | MS.gene072986:CDS |
| TCTTTGCTTTAGGTTGCTGA+GGG | 0.496709 | 3.3:+88579453 | MS.gene072986:intron |
| TGTTCTTGAGAAACTTCAAA+AGG | 0.498832 | 3.3:+88580379 | MS.gene072986:CDS |
| AACTGACTACGTGGTGGCCA+TGG | 0.500821 | 3.3:+88579342 | MS.gene072986:CDS |
| TCAGAGGATGAATCGGATGA+AGG | 0.501955 | 3.3:+88582096 | MS.gene072986:CDS |
| AAGTGTTTCCCATTGGAAGT+TGG | 0.502715 | 3.3:-88580167 | None:intergenic |
| TTCAAATCATTACCAAGTAA+TGG | 0.508223 | 3.3:-88578132 | None:intergenic |
| TGCATGGCTAGAGTGTTCTT+CGG | 0.509300 | 3.3:-88581923 | None:intergenic |
| TCTATCTTGGTCAGCAGCAG+GGG | 0.509861 | 3.3:-88581737 | None:intergenic |
| CTTTCTGGAACAGTATGGCC+GGG | 0.510215 | 3.3:-88581994 | None:intergenic |
| GCTTTCTGGAACAGTATGGC+CGG | 0.522641 | 3.3:-88581995 | None:intergenic |
| CCATACTGTTCCAGAAAGCA+TGG | 0.524685 | 3.3:+88581999 | MS.gene072986:CDS |
| TGGAGGCAAGTGTTTCCCAT+TGG | 0.535500 | 3.3:-88580174 | None:intergenic |
| TTTGCGAAAAGAAGAAATCT+GGG | 0.539173 | 3.3:-88579920 | None:intergenic |
| ATCTAGCAAGTCTCGTGTTG+AGG | 0.546298 | 3.3:+88580319 | MS.gene072986:CDS |
| TACTGTTGTTCCTGATTCAG+AGG | 0.548704 | 3.3:+88582080 | MS.gene072986:CDS |
| CAGAGGATGAATCGGATGAA+GGG | 0.550551 | 3.3:+88582097 | MS.gene072986:CDS |
| AGACAGTGATGATTCTAAAA+GGG | 0.551033 | 3.3:+88581801 | MS.gene072986:CDS |
| GCGAGTTCCATCTCTTTCAA+AGG | 0.553687 | 3.3:-88579947 | None:intergenic |
| AGTCTCCACTCCAAACCGTA+AGG | 0.554203 | 3.3:+88580123 | MS.gene072986:CDS |
| TCTCGTGTTGAGGTTTCTAT+GGG | 0.556850 | 3.3:+88580329 | MS.gene072986:CDS |
| AGCAGTAGTAAACGATCCAA+TGG | 0.562850 | 3.3:-88579618 | None:intergenic |
| TACCCTTTAGATGGTACAAG+TGG | 0.568604 | 3.3:-88579483 | None:intergenic |
| AAAGAGGCCTTTGAAAGAGA+TGG | 0.572685 | 3.3:+88579940 | MS.gene072986:CDS |
| TTTGCCCTTACGGTTTGGAG+TGG | 0.582614 | 3.3:-88580128 | None:intergenic |
| ACTCCAAACCGTAAGGGCAA+AGG | 0.583186 | 3.3:+88580130 | MS.gene072986:CDS |
| ATAACCAGCATCATCACTCT+CGG | 0.585101 | 3.3:-88581839 | None:intergenic |
| TGCAGTTTCTTATCCAAAAG+GGG | 0.586748 | 3.3:+88581942 | MS.gene072986:CDS |
| AAGCGGATAGCTGGAGTCCC+CGG | 0.589054 | 3.3:+88581976 | MS.gene072986:CDS |
| AGAGGAGATATCAAAGTACA+AGG | 0.590906 | 3.3:+88579587 | MS.gene072986:CDS |
| GTCTGCAGAAACATCTATGT+CGG | 0.600987 | 3.3:-88581782 | None:intergenic |
| ATCAGCTCTAACTTCACAGA+GGG | 0.608902 | 3.3:-88579646 | None:intergenic |
| ACTGACTACGTGGTGGCCAT+GGG | 0.610182 | 3.3:+88579343 | MS.gene072986:CDS |
| GTCTCCACTCCAAACCGTAA+GGG | 0.614231 | 3.3:+88580124 | MS.gene072986:CDS |
| CATACTGTTCCAGAAAGCAT+GGG | 0.616241 | 3.3:+88582000 | MS.gene072986:CDS |
| TACTAGGGAATACCACCTGT+TGG | 0.617403 | 3.3:+88579272 | MS.gene072986:intron |
| AGTCAGTTTCTTAGAGAGAG+CGG | 0.620141 | 3.3:-88579327 | None:intergenic |
| CCAAGATAGAAACAGAGGAT+CGG | 0.620891 | 3.3:+88581750 | MS.gene072986:CDS |
| TGAGAATCACAGCAGTAGTG+AGG | 0.635227 | 3.3:+88581867 | MS.gene072986:CDS |
| ATATCCGAGAGTGATGATGC+TGG | 0.636194 | 3.3:+88581835 | MS.gene072986:CDS |
| ACAGCCGAAGAAATTGAGAT+CGG | 0.644502 | 3.3:+88578159 | MS.gene072986:CDS |
| AAGGGGTTCGCTCTAGTAAG+CGG | 0.646238 | 3.3:+88581959 | MS.gene072986:CDS |
| TTTCTGGAACAGTATGGCCG+GGG | 0.648480 | 3.3:-88581993 | None:intergenic |
| TCTATGGCAGTATTTCGGGT+AGG | 0.657275 | 3.3:-88582054 | None:intergenic |
| TGCAGTGCTTTACCAACAGG+TGG | 0.658544 | 3.3:-88579284 | None:intergenic |
| TTATGTTCAGCAACATGATG+TGG | 0.660748 | 3.3:+88579864 | MS.gene072986:intron |
| TGATGAACATGCGAGTCAGG+CGG | 0.666316 | 3.3:+88581894 | MS.gene072986:CDS |
| TTATGATCGAACAATTAAGG+AGG | 0.677041 | 3.3:+88581308 | MS.gene072986:CDS |
| GCTGACCAAGATAGAAACAG+AGG | 0.685083 | 3.3:+88581745 | MS.gene072986:CDS |
| CTTTGCTTTAGGTTGCTGAG+GGG | 0.693013 | 3.3:+88579454 | MS.gene072986:intron |
| CTAAGAAACTGACTACGTGG+TGG | 0.712734 | 3.3:+88579336 | MS.gene072986:CDS |
| TCTCTAAGAAACTGACTACG+TGG | 0.744101 | 3.3:+88579333 | MS.gene072986:CDS |
| CATCAGCTCTAACTTCACAG+AGG | 0.765715 | 3.3:-88579647 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTATTACTTATATAAATAAA+GGG | + | chr3.3:88580696-88580715 | MS.gene072986:intron | 10.0% |
| !! | TATTACTTATATAAATAAAG+GGG | + | chr3.3:88580697-88580716 | MS.gene072986:intron | 10.0% |
| !! | TGTATTACTTATATAAATAA+AGG | + | chr3.3:88580695-88580714 | MS.gene072986:intron | 10.0% |
| !!! | ACATAAAAATATTTCATTTT+AGG | - | chr3.3:88578367-88578386 | None:intergenic | 10.0% |
| !! | AGAATAGAAATTATAAATGT+TGG | - | chr3.3:88581631-88581650 | None:intergenic | 15.0% |
| !! | ATAAATTTGAACAAATAAAC+AGG | - | chr3.3:88579684-88579703 | None:intergenic | 15.0% |
| !!! | TTAATTTTCTAAGTACTAAA+TGG | + | chr3.3:88580970-88580989 | MS.gene072986:intron | 15.0% |
| !!! | TTTATTTTATCAGATATTGT+AGG | - | chr3.3:88580860-88580879 | None:intergenic | 15.0% |
| !! | ACATTGAAATAATTACCAAT+AGG | - | chr3.3:88579977-88579996 | None:intergenic | 20.0% |
| !! | CATTTAAAGACAGTTAATTA+AGG | - | chr3.3:88580278-88580297 | None:intergenic | 20.0% |
| !! | GTGTTCAATAGTAAATATTA+GGG | + | chr3.3:88580420-88580439 | MS.gene072986:intron | 20.0% |
| !! | TGTGTTCAATAGTAAATATT+AGG | + | chr3.3:88580419-88580438 | MS.gene072986:intron | 20.0% |
| !! | TTAAAAATTAGAAAAGATGC+TGG | + | chr3.3:88578408-88578427 | MS.gene072986:intron | 20.0% |
| !! | TTAAATCTACAAAGAAACTA+AGG | - | chr3.3:88579236-88579255 | None:intergenic | 20.0% |
| !! | TTACCAAAACTGTAATTAAT+AGG | - | chr3.3:88580608-88580627 | None:intergenic | 20.0% |
| !! | TTGAAACATCAAAATTTGAA+AGG | - | chr3.3:88579807-88579826 | None:intergenic | 20.0% |
| !!! | AATGATATGGATTATTTTGA+TGG | + | chr3.3:88579832-88579851 | MS.gene072986:intron | 20.0% |
| !!! | ACATTAATCAAGTTCTTTTT+GGG | + | chr3.3:88581270-88581289 | MS.gene072986:intron | 20.0% |
| !!! | ATTAATGATGCTTTAAAAGA+AGG | + | chr3.3:88579895-88579914 | MS.gene072986:CDS | 20.0% |
| !!! | TGTTTCAATTTTGAATGATA+TGG | + | chr3.3:88579819-88579838 | MS.gene072986:intron | 20.0% |
| !!! | TTAATTAAGGTTTCAAGTAT+GGG | - | chr3.3:88580265-88580284 | None:intergenic | 20.0% |
| !!! | TTTAATTTTTACTCCTACTA+GGG | + | chr3.3:88579257-88579276 | MS.gene072986:intron | 20.0% |
| ! | AAACACAATCTTAGATGAAA+GGG | + | chr3.3:88581525-88581544 | MS.gene072986:intron | 25.0% |
| ! | AAGAAAGCTCAAAATATGTT+AGG | + | chr3.3:88579076-88579095 | MS.gene072986:intron | 25.0% |
| ! | AAGTAATACAAAAACGACAA+AGG | - | chr3.3:88580685-88580704 | None:intergenic | 25.0% |
| ! | AATGAGATAATATGCACTAT+GGG | - | chr3.3:88579016-88579035 | None:intergenic | 25.0% |
| ! | AATTTGAACAAATAAACAGG+AGG | - | chr3.3:88579681-88579700 | None:intergenic | 25.0% |
| ! | ATGCAGCAAATATATTGTTA+GGG | - | chr3.3:88581596-88581615 | None:intergenic | 25.0% |
| ! | CAGATTTAGATGATATTGTT+AGG | + | chr3.3:88578701-88578720 | MS.gene072986:intron | 25.0% |
| ! | CAGGCAGATTAATAATTATT+AGG | - | chr3.3:88580030-88580049 | None:intergenic | 25.0% |
| ! | CATCAAAATTTGAAAGGAAT+TGG | - | chr3.3:88579801-88579820 | None:intergenic | 25.0% |
| ! | CTTATATAAATAAAGGGGAT+TGG | + | chr3.3:88580702-88580721 | MS.gene072986:intron | 25.0% |
| ! | GAAAGGAATTGGATAAAAAA+GGG | - | chr3.3:88579790-88579809 | None:intergenic | 25.0% |
| ! | TAATGAGATAATATGCACTA+TGG | - | chr3.3:88579017-88579036 | None:intergenic | 25.0% |
| ! | TATGCAGCAAATATATTGTT+AGG | - | chr3.3:88581597-88581616 | None:intergenic | 25.0% |
| ! | TCATTAAATGCCATAACAAT+TGG | - | chr3.3:88579542-88579561 | None:intergenic | 25.0% |
| ! | TGAAACCATTAAGAAATATC+TGG | + | chr3.3:88578542-88578561 | MS.gene072986:intron | 25.0% |
| ! | TGAAAGGAATTGGATAAAAA+AGG | - | chr3.3:88579791-88579810 | None:intergenic | 25.0% |
| ! | TTACTATTGAACACAACAAA+AGG | - | chr3.3:88580414-88580433 | None:intergenic | 25.0% |
| ! | TTCAAATCATTACCAAGTAA+TGG | - | chr3.3:88578135-88578154 | None:intergenic | 25.0% |
| ! | TTCTATCCATTATTAGATAC+CGG | + | chr3.3:88579205-88579224 | MS.gene072986:intron | 25.0% |
| !! | AAATAGAAAGTATATGAACG+AGG | - | chr3.3:88579171-88579190 | None:intergenic | 25.0% |
| !! | ATGTTGATCTAATTGTTTCT+TGG | + | chr3.3:88578813-88578832 | MS.gene072986:intron | 25.0% |
| !! | ATTAAGAAATATCTGGAGTT+GGG | + | chr3.3:88578549-88578568 | MS.gene072986:intron | 25.0% |
| !! | ATTAATGCCATTTCAATGTT+AGG | + | chr3.3:88581036-88581055 | MS.gene072986:intron | 25.0% |
| !! | ATTCCATTTGATGATATACA+AGG | - | chr3.3:88581415-88581434 | None:intergenic | 25.0% |
| !! | GAAAAGAAACAAAGTATTAC+AGG | - | chr3.3:88581481-88581500 | None:intergenic | 25.0% |
| !! | GACATTAATCAAGTTCTTTT+TGG | + | chr3.3:88581269-88581288 | MS.gene072986:intron | 25.0% |
| !! | GTTAATTAAGGTTTCAAGTA+TGG | - | chr3.3:88580266-88580285 | None:intergenic | 25.0% |
| !! | TGTCTTTAAATGTTATTTGC+AGG | + | chr3.3:88580286-88580305 | MS.gene072986:intron | 25.0% |
| !! | TGTTGATCTAATTGTTTCTT+GGG | + | chr3.3:88578814-88578833 | MS.gene072986:intron | 25.0% |
| !!! | ACTTTCTATTTTTCTGTTGA+TGG | + | chr3.3:88579180-88579199 | MS.gene072986:intron | 25.0% |
| !!! | ATTACTTGGTAATGATTTGA+AGG | + | chr3.3:88578134-88578153 | MS.gene072986:CDS | 25.0% |
| !!! | GTTTAATTTTTACTCCTACT+AGG | + | chr3.3:88579256-88579275 | MS.gene072986:intron | 25.0% |
| !!! | TTTAAGTCTTTGTTTGCTTT+TGG | - | chr3.3:88578494-88578513 | None:intergenic | 25.0% |
| AAAGGACAAAGAACAAAGAA+CGG | - | chr3.3:88580667-88580686 | None:intergenic | 30.0% | |
| AACCAATGGGATATAATATC+AGG | - | chr3.3:88581360-88581379 | None:intergenic | 30.0% | |
| AAGTTAGAGCTGATGTAATA+TGG | + | chr3.3:88579655-88579674 | MS.gene072986:intron | 30.0% | |
| AATGAAACAAAAAGAGAGAC+AGG | + | chr3.3:88580514-88580533 | MS.gene072986:CDS | 30.0% | |
| AATGCCATAACAATTGGTAT+TGG | - | chr3.3:88579536-88579555 | None:intergenic | 30.0% | |
| ACTACCAATACCAATTGTTA+TGG | + | chr3.3:88579529-88579548 | MS.gene072986:intron | 30.0% | |
| AGCTTATGATCGAACAATTA+AGG | + | chr3.3:88581305-88581324 | MS.gene072986:CDS | 30.0% | |
| ATGAGATAATATGCACTATG+GGG | - | chr3.3:88579015-88579034 | None:intergenic | 30.0% | |
| ATGATGACTAATGGAACAAT+AGG | - | chr3.3:88581084-88581103 | None:intergenic | 30.0% | |
| ATGCAGTTTCTTATCCAAAA+GGG | + | chr3.3:88581941-88581960 | MS.gene072986:CDS | 30.0% | |
| ATTGATCTGTCTGTAGTAAA+TGG | + | chr3.3:88578757-88578776 | MS.gene072986:intron | 30.0% | |
| CAACTCCAGATATTTCTTAA+TGG | - | chr3.3:88578550-88578569 | None:intergenic | 30.0% | |
| CAATTATCTCTGAGCATTAT+CGG | + | chr3.3:88579756-88579775 | MS.gene072986:intron | 30.0% | |
| CATCCTTGTATATCATCAAA+TGG | + | chr3.3:88581409-88581428 | MS.gene072986:intron | 30.0% | |
| CCTTCAAAATTTGAATGTGA+AGG | - | chr3.3:88578215-88578234 | None:intergenic | 30.0% | |
| GAAACACAATCTTAGATGAA+AGG | + | chr3.3:88581524-88581543 | MS.gene072986:intron | 30.0% | |
| TAATGAACTGACGTCATTAT+TGG | + | chr3.3:88579556-88579575 | MS.gene072986:intron | 30.0% | |
| TACCTGATATTATATCCCAT+TGG | + | chr3.3:88581355-88581374 | MS.gene072986:intron | 30.0% | |
| TAGATTCTATGGCAGTATTT+CGG | - | chr3.3:88582062-88582081 | None:intergenic | 30.0% | |
| TCAGAGATAATTGTATAGTC+AGG | - | chr3.3:88579749-88579768 | None:intergenic | 30.0% | |
| TCTTCATGCTTGCATATTTA+TGG | + | chr3.3:88580630-88580649 | MS.gene072986:intron | 30.0% | |
| TGACAAAATCATGAAGAGAT+TGG | - | chr3.3:88580003-88580022 | None:intergenic | 30.0% | |
| TGCAATTCCTAACATTGAAA+TGG | - | chr3.3:88581046-88581065 | None:intergenic | 30.0% | |
| TGTTCTTGAGAAACTTCAAA+AGG | + | chr3.3:88580379-88580398 | MS.gene072986:CDS | 30.0% | |
| TTATCCACGTTATTATTCTC+AGG | - | chr3.3:88581557-88581576 | None:intergenic | 30.0% | |
| TTATGATCGAACAATTAAGG+AGG | + | chr3.3:88581308-88581327 | MS.gene072986:CDS | 30.0% | |
| TTCAACTGATGTTTAGCAAA+AGG | + | chr3.3:88581707-88581726 | MS.gene072986:intron | 30.0% | |
| TTCAGAAAATTCGTCTAGAT+TGG | - | chr3.3:88580197-88580216 | None:intergenic | 30.0% | |
| TTGAATTGCTCTGTATTACT+TGG | + | chr3.3:88580834-88580853 | MS.gene072986:intron | 30.0% | |
| TTTAAACCACAATCCACAAA+AGG | - | chr3.3:88578319-88578338 | None:intergenic | 30.0% | |
| TTTGCGAAAAGAAGAAATCT+GGG | - | chr3.3:88579923-88579942 | None:intergenic | 30.0% | |
| ! | ACGTGGATAACTTTTAACAA+TGG | + | chr3.3:88581567-88581586 | MS.gene072986:intron | 30.0% |
| ! | AGACAGTGATGATTCTAAAA+GGG | + | chr3.3:88581801-88581820 | MS.gene072986:CDS | 30.0% |
| ! | AGGCCTATTAATTACAGTTT+TGG | + | chr3.3:88580602-88580621 | MS.gene072986:CDS | 30.0% |
| ! | ATCTAAGATTGTGTTTCAGT+GGG | - | chr3.3:88581521-88581540 | None:intergenic | 30.0% |
| ! | CATTAAGAAATATCTGGAGT+TGG | + | chr3.3:88578548-88578567 | MS.gene072986:intron | 30.0% |
| ! | CATTAGAACAGTGTTACTAT+CGG | - | chr3.3:88578892-88578911 | None:intergenic | 30.0% |
| ! | CCTTCACATTCAAATTTTGA+AGG | + | chr3.3:88578212-88578231 | MS.gene072986:CDS | 30.0% |
| ! | GATTTATTGCTTTGTTCTGT+TGG | + | chr3.3:88579425-88579444 | MS.gene072986:intron | 30.0% |
| ! | TTGTGGATTGTGGTTTAAAA+CGG | + | chr3.3:88578320-88578339 | MS.gene072986:intron | 30.0% |
| ! | TTTCAAGTATGGGTAAATGA+TGG | - | chr3.3:88580255-88580274 | None:intergenic | 30.0% |
| ! | TTTCAGAACTCTTTTTCTTC+TGG | + | chr3.3:88580554-88580573 | MS.gene072986:CDS | 30.0% |
| !!! | CTTTGTTTTCACGTCTTATT+TGG | + | chr3.3:88578913-88578932 | MS.gene072986:intron | 30.0% |
| !!! | TTTTGAAGTTTCTCAAGAAC+AGG | - | chr3.3:88580380-88580399 | None:intergenic | 30.0% |
| AATCCACTTGTACCATCTAA+AGG | + | chr3.3:88579480-88579499 | MS.gene072986:CDS | 35.0% | |
| ACAAGAAATCAGTGAAAGTG+AGG | - | chr3.3:88580888-88580907 | None:intergenic | 35.0% | |
| AGAAAATTCGTCTAGATTGG+AGG | - | chr3.3:88580194-88580213 | None:intergenic | 35.0% | |
| AGAACATGATCAGTTCAACT+TGG | - | chr3.3:88579509-88579528 | None:intergenic | 35.0% | |
| AGAGGAGATATCAAAGTACA+AGG | + | chr3.3:88579587-88579606 | MS.gene072986:CDS | 35.0% | |
| AGATTCTATAGTAAGGAGAG+TGG | + | chr3.3:88578443-88578462 | MS.gene072986:intron | 35.0% | |
| AGATTCTATGGCAGTATTTC+GGG | - | chr3.3:88582061-88582080 | None:intergenic | 35.0% | |
| ATAAACAACCTTTGCCCTTA+CGG | - | chr3.3:88580141-88580160 | None:intergenic | 35.0% | |
| ATCCACTTGTACCATCTAAA+GGG | + | chr3.3:88579481-88579500 | MS.gene072986:CDS | 35.0% | |
| CAAAGAAACTAAGGATAGAC+CGG | - | chr3.3:88579227-88579246 | None:intergenic | 35.0% | |
| CAATAAATCGTATCAGCAAC+GGG | - | chr3.3:88579414-88579433 | None:intergenic | 35.0% | |
| CAGACAGTGATGATTCTAAA+AGG | + | chr3.3:88581800-88581819 | MS.gene072986:CDS | 35.0% | |
| CAGATAGAACATGAACCAAT+GGG | - | chr3.3:88581373-88581392 | None:intergenic | 35.0% | |
| CATGCAGTTTCTTATCCAAA+AGG | + | chr3.3:88581940-88581959 | MS.gene072986:CDS | 35.0% | |
| CTTTGCGAAAAGAAGAAATC+TGG | - | chr3.3:88579924-88579943 | None:intergenic | 35.0% | |
| GATAGACCGGTATCTAATAA+TGG | - | chr3.3:88579214-88579233 | None:intergenic | 35.0% | |
| GCAATAAATCGTATCAGCAA+CGG | - | chr3.3:88579415-88579434 | None:intergenic | 35.0% | |
| GCATGTGATATGATGACTAA+TGG | - | chr3.3:88581093-88581112 | None:intergenic | 35.0% | |
| GGAATTGGATAAAAAAGGGA+AGG | - | chr3.3:88579786-88579805 | None:intergenic | 35.0% | |
| GTTTAATCCCCTCAAAGAAA+AGG | + | chr3.3:88581436-88581455 | MS.gene072986:intron | 35.0% | |
| GTTTGGCATTATGATGCATA+GGG | + | chr3.3:88580776-88580795 | MS.gene072986:intron | 35.0% | |
| TACAGAGCAATTCAAAAGAG+AGG | - | chr3.3:88580829-88580848 | None:intergenic | 35.0% | |
| TACCTACAATAGACAAAGTC+AGG | - | chr3.3:88580049-88580068 | None:intergenic | 35.0% | |
| TCATATCAATTGAGCAGATG+AGG | + | chr3.3:88580725-88580744 | MS.gene072986:intron | 35.0% | |
| TGCAGTTTCTTATCCAAAAG+GGG | + | chr3.3:88581942-88581961 | MS.gene072986:CDS | 35.0% | |
| TGTCTCTTTATGACATCAGT+TGG | + | chr3.3:88581241-88581260 | MS.gene072986:intron | 35.0% | |
| TGTTCCTGAGAATAATAACG+TGG | + | chr3.3:88581550-88581569 | MS.gene072986:intron | 35.0% | |
| TTAGAAAAGATGCTGGAACT+AGG | + | chr3.3:88578415-88578434 | MS.gene072986:intron | 35.0% | |
| TTATGTTCAGCAACATGATG+TGG | + | chr3.3:88579864-88579883 | MS.gene072986:intron | 35.0% | |
| ! | ATTCAAATGCTTGCCTTTTG+TGG | + | chr3.3:88578303-88578322 | MS.gene072986:intron | 35.0% |
| ! | CATCTAAGATTGTGTTTCAG+TGG | - | chr3.3:88581522-88581541 | None:intergenic | 35.0% |
| ! | CTTTTGGATAAGAAACTGCA+TGG | - | chr3.3:88581942-88581961 | None:intergenic | 35.0% |
| ! | GATTTCTTCTTTTCGCAAAG+AGG | + | chr3.3:88579924-88579943 | MS.gene072986:CDS | 35.0% |
| ! | TACTTGCTCCTTTTCTTTGA+GGG | - | chr3.3:88581447-88581466 | None:intergenic | 35.0% |
| ! | TAGTCTTAGAGAGTAATGTG+CGG | + | chr3.3:88580939-88580958 | MS.gene072986:intron | 35.0% |
| ! | TCATTATTGGTTATGCAGAG+AGG | + | chr3.3:88579569-88579588 | MS.gene072986:intron | 35.0% |
| ! | TTACTTGCTCCTTTTCTTTG+AGG | - | chr3.3:88581448-88581467 | None:intergenic | 35.0% |
| !! | GAGAAGCATCAAACAAAATG+TGG | - | chr3.3:88581170-88581189 | None:intergenic | 35.0% |
| !! | TTAGTTGTAACTGACTTGAC+AGG | + | chr3.3:88581130-88581149 | MS.gene072986:intron | 35.0% |
| !!! | AGGCAAATGCAATTTTAGCT+TGG | + | chr3.3:88579096-88579115 | MS.gene072986:intron | 35.0% |
| !!! | CAAATGCAATTTTAGCTTGG+AGG | + | chr3.3:88579099-88579118 | MS.gene072986:intron | 35.0% |
| AAGGATGATGCAATGTGACA+AGG | - | chr3.3:88581396-88581415 | None:intergenic | 40.0% | |
| AAGTGTTTCCCATTGGAAGT+TGG | - | chr3.3:88580170-88580189 | None:intergenic | 40.0% | |
| ACAGCCGAAGAAATTGAGAT+CGG | + | chr3.3:88578159-88578178 | MS.gene072986:CDS | 40.0% | |
| ACTGCACGAGTCTGATAAAT+GGG | + | chr3.3:88579301-88579320 | MS.gene072986:CDS | 40.0% | |
| AGCAGTAGTAAACGATCCAA+TGG | - | chr3.3:88579621-88579640 | None:intergenic | 40.0% | |
| AGGGAAGACAGATCTTTCTT+AGG | + | chr3.3:88582116-88582135 | MS.gene072986:CDS | 40.0% | |
| AGTCAGTTTCTTAGAGAGAG+CGG | - | chr3.3:88579330-88579349 | None:intergenic | 40.0% | |
| AGTGTTTCCCATTGGAAGTT+GGG | - | chr3.3:88580169-88580188 | None:intergenic | 40.0% | |
| ATAACCAGCATCATCACTCT+CGG | - | chr3.3:88581842-88581861 | None:intergenic | 40.0% | |
| ATCACTTCCCAACTTCCAAT+GGG | + | chr3.3:88580159-88580178 | MS.gene072986:CDS | 40.0% | |
| CAGGTGTTTAGTCCATTACT+TGG | + | chr3.3:88578120-88578139 | MS.gene072986:CDS | 40.0% | |
| CATTATGATGCATAGGGATG+GGG | + | chr3.3:88580782-88580801 | MS.gene072986:intron | 40.0% | |
| CCAAGATAGAAACAGAGGAT+CGG | + | chr3.3:88581750-88581769 | MS.gene072986:CDS | 40.0% | |
| CGTTTGGCATTATGATGCAT+AGG | + | chr3.3:88580775-88580794 | MS.gene072986:intron | 40.0% | |
| CTATAGTAAGGAGAGTGGAT+TGG | + | chr3.3:88578448-88578467 | MS.gene072986:intron | 40.0% | |
| GAGTCCGATCTCAATTTCTT+CGG | - | chr3.3:88578166-88578185 | None:intergenic | 40.0% | |
| GCAGATAGAACATGAACCAA+TGG | - | chr3.3:88581374-88581393 | None:intergenic | 40.0% | |
| GCATCATAATGCCAAACGAA+GGG | - | chr3.3:88580773-88580792 | None:intergenic | 40.0% | |
| GCATTATGATGCATAGGGAT+GGG | + | chr3.3:88580781-88580800 | MS.gene072986:intron | 40.0% | |
| GGCGTGTAGATTCTATAGTA+AGG | + | chr3.3:88578436-88578455 | MS.gene072986:intron | 40.0% | |
| GTCTGCAGAAACATCTATGT+CGG | - | chr3.3:88581785-88581804 | None:intergenic | 40.0% | |
| TACCCTTTAGATGGTACAAG+TGG | - | chr3.3:88579486-88579505 | None:intergenic | 40.0% | |
| TATCACTTCCCAACTTCCAA+TGG | + | chr3.3:88580158-88580177 | MS.gene072986:CDS | 40.0% | |
| TCAACTTGGTACCCTTTAGA+TGG | - | chr3.3:88579495-88579514 | None:intergenic | 40.0% | |
| TCCTGATTCAGAGGATGAAT+CGG | + | chr3.3:88582089-88582108 | MS.gene072986:CDS | 40.0% | |
| TCTCGTGTTGAGGTTTCTAT+GGG | + | chr3.3:88580329-88580348 | MS.gene072986:CDS | 40.0% | |
| TGCATCATAATGCCAAACGA+AGG | - | chr3.3:88580774-88580793 | None:intergenic | 40.0% | |
| TGCCTGACTTTGTCTATTGT+AGG | + | chr3.3:88580044-88580063 | MS.gene072986:intron | 40.0% | |
| TGGAAGAAACACAGATCAGT+TGG | + | chr3.3:88578933-88578952 | MS.gene072986:intron | 40.0% | |
| ! | AAAGAGGCCTTTGAAAGAGA+TGG | + | chr3.3:88579940-88579959 | MS.gene072986:CDS | 40.0% |
| ! | ACTTGCTCCTTTTCTTTGAG+GGG | - | chr3.3:88581446-88581465 | None:intergenic | 40.0% |
| ! | ATCAGCTCTAACTTCACAGA+GGG | - | chr3.3:88579649-88579668 | None:intergenic | 40.0% |
| ! | ATCTATTGATGACTCACCCA+TGG | - | chr3.3:88579362-88579381 | None:intergenic | 40.0% |
| ! | CATACTGTTCCAGAAAGCAT+GGG | + | chr3.3:88582000-88582019 | MS.gene072986:CDS | 40.0% |
| ! | GCAGAGTCACAGATTTTACA+GGG | + | chr3.3:88580087-88580106 | MS.gene072986:CDS | 40.0% |
| ! | GGGTAAATGATGGAAGAGAA+AGG | - | chr3.3:88580245-88580264 | None:intergenic | 40.0% |
| ! | TATTGCTTTGTTCTGTTGGC+TGG | + | chr3.3:88579429-88579448 | MS.gene072986:intron | 40.0% |
| ! | TCTCTAAGAAACTGACTACG+TGG | + | chr3.3:88579333-88579352 | MS.gene072986:CDS | 40.0% |
| !! | AGGTTAGCAAGAGAAGCATT+AGG | - | chr3.3:88578195-88578214 | None:intergenic | 40.0% |
| !! | TCTTTGCTTTAGGTTGCTGA+GGG | + | chr3.3:88579453-88579472 | MS.gene072986:intron | 40.0% |
| !! | TGTAACTGACTTGACAGGTT+GGG | + | chr3.3:88581135-88581154 | MS.gene072986:intron | 40.0% |
| !! | TTGTAACTGACTTGACAGGT+TGG | + | chr3.3:88581134-88581153 | MS.gene072986:intron | 40.0% |
| AACAGGTGGTATTCCCTAGT+AGG | - | chr3.3:88579273-88579292 | None:intergenic | 45.0% | |
| AGGATGTCTGTGTATGTGTG+AGG | + | chr3.3:88580745-88580764 | MS.gene072986:intron | 45.0% | |
| ATCTAGCAAGTCTCGTGTTG+AGG | + | chr3.3:88580319-88580338 | MS.gene072986:CDS | 45.0% | |
| ATGGAACTCGCACATCCTAT+TGG | + | chr3.3:88579959-88579978 | MS.gene072986:CDS | 45.0% | |
| ATGTACCTAAACCCACTCAG+TGG | + | chr3.3:88578630-88578649 | MS.gene072986:intron | 45.0% | |
| CAAGTCTAATCCCACTGAGT+GGG | - | chr3.3:88578644-88578663 | None:intergenic | 45.0% | |
| CACTGCACGAGTCTGATAAA+TGG | + | chr3.3:88579300-88579319 | MS.gene072986:CDS | 45.0% | |
| CAGAGGATGAATCGGATGAA+GGG | + | chr3.3:88582097-88582116 | MS.gene072986:CDS | 45.0% | |
| CCATACTGTTCCAGAAAGCA+TGG | + | chr3.3:88581999-88582018 | MS.gene072986:CDS | 45.0% | |
| CTAAGAAACTGACTACGTGG+TGG | + | chr3.3:88579336-88579355 | MS.gene072986:CDS | 45.0% | |
| CTGTCTGTAGTAAATGGCCT+GGG | + | chr3.3:88578763-88578782 | MS.gene072986:intron | 45.0% | |
| GAATGATGAACATGCGAGTC+AGG | + | chr3.3:88581891-88581910 | MS.gene072986:CDS | 45.0% | |
| GCATCATCACTCTCGGATAT+AGG | - | chr3.3:88581835-88581854 | None:intergenic | 45.0% | |
| GCGAGTTCCATCTCTTTCAA+AGG | - | chr3.3:88579950-88579969 | None:intergenic | 45.0% | |
| GCTGACCAAGATAGAAACAG+AGG | + | chr3.3:88581745-88581764 | MS.gene072986:CDS | 45.0% | |
| GGCATTATGATGCATAGGGA+TGG | + | chr3.3:88580780-88580799 | MS.gene072986:intron | 45.0% | |
| GTACAAGGAGCTTGATCCAT+TGG | + | chr3.3:88579602-88579621 | MS.gene072986:CDS | 45.0% | |
| GTCTCGTGTTGAGGTTTCTA+TGG | + | chr3.3:88580328-88580347 | MS.gene072986:CDS | 45.0% | |
| TACTAGGGAATACCACCTGT+TGG | + | chr3.3:88579272-88579291 | MS.gene072986:intron | 45.0% | |
| TCAGAGGATGAATCGGATGA+AGG | + | chr3.3:88582096-88582115 | MS.gene072986:CDS | 45.0% | |
| TCCGATTCATCCTCTGAATC+AGG | - | chr3.3:88582093-88582112 | None:intergenic | 45.0% | |
| TCTGTCTGTAGTAAATGGCC+TGG | + | chr3.3:88578762-88578781 | MS.gene072986:intron | 45.0% | |
| TGAGAATCACAGCAGTAGTG+AGG | + | chr3.3:88581867-88581886 | MS.gene072986:CDS | 45.0% | |
| TGGAGTTGGGAGTAATGAGT+TGG | + | chr3.3:88578562-88578581 | MS.gene072986:intron | 45.0% | |
| TGTACCTAAACCCACTCAGT+GGG | + | chr3.3:88578631-88578650 | MS.gene072986:intron | 45.0% | |
| TTCGGTGATTCGTGTGATTC+AGG | + | chr3.3:88578101-88578120 | MS.gene072986:CDS | 45.0% | |
| TTCTATCTTGGTCAGCAGCA+GGG | - | chr3.3:88581741-88581760 | None:intergenic | 45.0% | |
| TTTCTATCTTGGTCAGCAGC+AGG | - | chr3.3:88581742-88581761 | None:intergenic | 45.0% | |
| ! | ATATCCGAGAGTGATGATGC+TGG | + | chr3.3:88581835-88581854 | MS.gene072986:CDS | 45.0% |
| ! | CATCAGCTCTAACTTCACAG+AGG | - | chr3.3:88579650-88579669 | None:intergenic | 45.0% |
| ! | CGCAGAGTCACAGATTTTAC+AGG | + | chr3.3:88580086-88580105 | MS.gene072986:CDS | 45.0% |
| ! | TAATCCCACTGAGTGGGTTT+AGG | - | chr3.3:88578638-88578657 | None:intergenic | 45.0% |
| ! | TCTATGGCAGTATTTCGGGT+AGG | - | chr3.3:88582057-88582076 | None:intergenic | 45.0% |
| ! | TGCATGGCTAGAGTGTTCTT+CGG | - | chr3.3:88581926-88581945 | None:intergenic | 45.0% |
| ! | TTACTAGAGCGAACCCCTTT+TGG | - | chr3.3:88581958-88581977 | None:intergenic | 45.0% |
| !! | AGTAAGGAGAGTGGATTGGA+TGG | + | chr3.3:88578452-88578471 | MS.gene072986:intron | 45.0% |
| !! | CCATGCTTTCTGGAACAGTA+TGG | - | chr3.3:88582002-88582021 | None:intergenic | 45.0% |
| !! | CCGATCCTCTGTTTCTATCT+TGG | - | chr3.3:88581753-88581772 | None:intergenic | 45.0% |
| !! | CTCTTTGCTTTAGGTTGCTG+AGG | + | chr3.3:88579452-88579471 | MS.gene072986:intron | 45.0% |
| !! | CTTTGCTTTAGGTTGCTGAG+GGG | + | chr3.3:88579454-88579473 | MS.gene072986:intron | 45.0% |
| !! | TGCTTGCCTTTTGTGGATTG+TGG | + | chr3.3:88578310-88578329 | MS.gene072986:intron | 45.0% |
| !! | AATATATTAATTCTTTAAAT+TGG | + | chr3.3:88579125-88579144 | MS.gene072986:intron | 5.0% |
| !! | TTAATATTAAAAACAAATAA+AGG | - | chr3.3:88580448-88580467 | None:intergenic | 5.0% |
| AAGGGGTTCGCTCTAGTAAG+CGG | + | chr3.3:88581959-88581978 | MS.gene072986:CDS | 50.0% | |
| ACTCCAAACCGTAAGGGCAA+AGG | + | chr3.3:88580130-88580149 | MS.gene072986:CDS | 50.0% | |
| AGTCTCCACTCCAAACCGTA+AGG | + | chr3.3:88580123-88580142 | MS.gene072986:CDS | 50.0% | |
| CAACCTTTGCCCTTACGGTT+TGG | - | chr3.3:88580136-88580155 | None:intergenic | 50.0% | |
| CAGTGGGTGTATCTCAGCAA+TGG | - | chr3.3:88581505-88581524 | None:intergenic | 50.0% | |
| CCAAGTCTAATCCCACTGAG+TGG | - | chr3.3:88578645-88578664 | None:intergenic | 50.0% | |
| CCACTCAGTGGGATTAGACT+TGG | + | chr3.3:88578642-88578661 | MS.gene072986:intron | 50.0% | |
| GCAGTCAAACCCATGCTTTC+TGG | - | chr3.3:88582012-88582031 | None:intergenic | 50.0% | |
| GTCTCCACTCCAAACCGTAA+GGG | + | chr3.3:88580124-88580143 | MS.gene072986:CDS | 50.0% | |
| TCGTGCAGTGCTTTACCAAC+AGG | - | chr3.3:88579290-88579309 | None:intergenic | 50.0% | |
| TCTATCTTGGTCAGCAGCAG+GGG | - | chr3.3:88581740-88581759 | None:intergenic | 50.0% | |
| TGATGAACATGCGAGTCAGG+CGG | + | chr3.3:88581894-88581913 | MS.gene072986:CDS | 50.0% | |
| TGCAGTGCTTTACCAACAGG+TGG | - | chr3.3:88579287-88579306 | None:intergenic | 50.0% | |
| TGGAGGCAAGTGTTTCCCAT+TGG | - | chr3.3:88580177-88580196 | None:intergenic | 50.0% | |
| ! | AATGGCCTGGGAAAAAGCAC+TGG | + | chr3.3:88578775-88578794 | MS.gene072986:intron | 50.0% |
| ! | GTTGGCTGGCTCTTTGCTTT+AGG | + | chr3.3:88579443-88579462 | MS.gene072986:intron | 50.0% |
| ! | TTTGCCCTTACGGTTTGGAG+TGG | - | chr3.3:88580131-88580150 | None:intergenic | 50.0% |
| !! | AAGGAGAGTGGATTGGATGG+AGG | + | chr3.3:88578455-88578474 | MS.gene072986:intron | 50.0% |
| !! | AGGAGAGTGGATTGGATGGA+GGG | + | chr3.3:88578456-88578475 | MS.gene072986:intron | 50.0% |
| !! | CTTTCTGGAACAGTATGGCC+GGG | - | chr3.3:88581997-88582016 | None:intergenic | 50.0% |
| !! | GCTTTCTGGAACAGTATGGC+CGG | - | chr3.3:88581998-88582017 | None:intergenic | 50.0% |
| !! | TTTCTGGAACAGTATGGCCG+GGG | - | chr3.3:88581996-88582015 | None:intergenic | 50.0% |
| AACTGACTACGTGGTGGCCA+TGG | + | chr3.3:88579342-88579361 | MS.gene072986:CDS | 55.0% | |
| ACTGACTACGTGGTGGCCAT+GGG | + | chr3.3:88579343-88579362 | MS.gene072986:CDS | 55.0% | |
| CACGCTCTTGTCGCACTAGA+AGG | + | chr3.3:88580582-88580601 | MS.gene072986:CDS | 55.0% | |
| CGCTCTAGTAAGCGGATAGC+TGG | + | chr3.3:88581967-88581986 | MS.gene072986:CDS | 55.0% | |
| ! | TGTGTGAGGTGCCCTTCGTT+TGG | + | chr3.3:88580759-88580778 | MS.gene072986:intron | 55.0% |
| !! | GCCTGGGAAAAAGCACTGGA+GGG | + | chr3.3:88578779-88578798 | MS.gene072986:intron | 55.0% |
| AAGCGGATAGCTGGAGTCCC+CGG | + | chr3.3:88581976-88581995 | MS.gene072986:CDS | 60.0% | |
| !! | GGCCTGGGAAAAAGCACTGG+AGG | + | chr3.3:88578778-88578797 | MS.gene072986:intron | 60.0% |
| !!! | GCCCTCCAGTGCTTTTTCCC+AGG | - | chr3.3:88578783-88578802 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 88578087 | 88582137 | 88578087 | ID=MS.gene072986 |
| chr3.3 | mRNA | 88578087 | 88582137 | 88578087 | ID=MS.gene072986.t1;Parent=MS.gene072986 |
| chr3.3 | exon | 88578087 | 88578233 | 88578087 | ID=MS.gene072986.t1.exon1;Parent=MS.gene072986.t1 |
| chr3.3 | CDS | 88578087 | 88578233 | 88578087 | ID=cds.MS.gene072986.t1;Parent=MS.gene072986.t1 |
| chr3.3 | exon | 88579278 | 88579364 | 88579278 | ID=MS.gene072986.t1.exon2;Parent=MS.gene072986.t1 |
| chr3.3 | CDS | 88579278 | 88579364 | 88579278 | ID=cds.MS.gene072986.t1;Parent=MS.gene072986.t1 |
| chr3.3 | exon | 88579465 | 88579502 | 88579465 | ID=MS.gene072986.t1.exon3;Parent=MS.gene072986.t1 |
| chr3.3 | CDS | 88579465 | 88579502 | 88579465 | ID=cds.MS.gene072986.t1;Parent=MS.gene072986.t1 |
| chr3.3 | exon | 88579587 | 88579668 | 88579587 | ID=MS.gene072986.t1.exon4;Parent=MS.gene072986.t1 |
| chr3.3 | CDS | 88579587 | 88579668 | 88579587 | ID=cds.MS.gene072986.t1;Parent=MS.gene072986.t1 |
| chr3.3 | exon | 88579874 | 88579980 | 88579874 | ID=MS.gene072986.t1.exon5;Parent=MS.gene072986.t1 |
| chr3.3 | CDS | 88579874 | 88579980 | 88579874 | ID=cds.MS.gene072986.t1;Parent=MS.gene072986.t1 |
| chr3.3 | exon | 88580066 | 88580222 | 88580066 | ID=MS.gene072986.t1.exon6;Parent=MS.gene072986.t1 |
| chr3.3 | CDS | 88580066 | 88580222 | 88580066 | ID=cds.MS.gene072986.t1;Parent=MS.gene072986.t1 |
| chr3.3 | exon | 88580308 | 88580400 | 88580308 | ID=MS.gene072986.t1.exon7;Parent=MS.gene072986.t1 |
| chr3.3 | CDS | 88580308 | 88580400 | 88580308 | ID=cds.MS.gene072986.t1;Parent=MS.gene072986.t1 |
| chr3.3 | exon | 88580500 | 88580623 | 88580500 | ID=MS.gene072986.t1.exon8;Parent=MS.gene072986.t1 |
| chr3.3 | CDS | 88580500 | 88580623 | 88580500 | ID=cds.MS.gene072986.t1;Parent=MS.gene072986.t1 |
| chr3.3 | exon | 88581304 | 88581346 | 88581304 | ID=MS.gene072986.t1.exon9;Parent=MS.gene072986.t1 |
| chr3.3 | CDS | 88581304 | 88581346 | 88581304 | ID=cds.MS.gene072986.t1;Parent=MS.gene072986.t1 |
| chr3.3 | exon | 88581723 | 88582137 | 88581723 | ID=MS.gene072986.t1.exon10;Parent=MS.gene072986.t1 |
| chr3.3 | CDS | 88581723 | 88582137 | 88581723 | ID=cds.MS.gene072986.t1;Parent=MS.gene072986.t1 |
| Gene Sequence |
| Protein sequence |
