AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene059842


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059842.t1 MTR_2g079460 95.601 341 14 1 1 340 1 341 0.0 638
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059842.t1 AT5G53800 73.653 167 44 0 174 340 185 351 1.10e-87 268

Find 82 sgRNAs with CRISPR-Local

Find 331 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTTCTGGTTGCAGATTTA+TGG 0.143979 2.4:-18162501 MS.gene059842:intron
CTTCCTACGGCGTCGTTTAT+CGG 0.212866 2.4:+18166330 None:intergenic
ACTAATTTATGGGGAAAGTA+TGG 0.215379 2.4:-18165992 MS.gene059842:CDS
AATGAAGAAGAAGGAGAAAA+AGG 0.227339 2.4:-18166038 MS.gene059842:CDS
TGGTTCGGAGTCGGAGTATT+CGG 0.235691 2.4:-18166215 MS.gene059842:CDS
GATGAATCGGATTCGGATTC+CGG 0.241858 2.4:-18166277 MS.gene059842:CDS
ATATGGAGCATCTGTCTAAT+TGG 0.263850 2.4:-18162809 MS.gene059842:CDS
AAGGTGCTGTGACTAATTTA+TGG 0.342345 2.4:-18166003 MS.gene059842:CDS
GAGAGAGGAAGGAGAGGAAG+AGG 0.365433 2.4:-18166177 MS.gene059842:CDS
GGTTCGGAGTCGGAGTATTC+GGG 0.365915 2.4:-18166214 MS.gene059842:CDS
TTCGGATTCCGGTTCGGATT+CGG 0.373650 2.4:-18166266 MS.gene059842:CDS
ACCGTCTACACGGCAGCATC+AGG 0.383942 2.4:+18161469 None:intergenic
ATCGGATTGTGTGTCTATAT+CGG 0.388915 2.4:+18166405 None:intergenic
AGGTGCTGTGACTAATTTAT+GGG 0.400642 2.4:-18166002 MS.gene059842:CDS
ATCGGATTCGGATTCCGGTT+CGG 0.415782 2.4:-18166272 MS.gene059842:CDS
AGAAGCGAAGGAGGAGAGAG+AGG 0.415874 2.4:-18166150 MS.gene059842:CDS
GCCAACCATGCGGTGAACTC+TGG 0.432000 2.4:+18163279 None:intergenic
CTCTGACTCCGAATCCGAAC+CGG 0.434327 2.4:+18166258 None:intergenic
TCGAGAAACGTTAACGGTAA+TGG 0.435120 2.4:-18166514 MS.gene059842:CDS
GGAAGAGGAAGGAGAAGCGA+AGG 0.437488 2.4:-18166162 MS.gene059842:CDS
TTGAAAACTGTTCGTTCCTT+AGG 0.443550 2.4:+18162201 None:intergenic
AGAGGAAGGAGAAGCGAAGG+AGG 0.446107 2.4:-18166159 MS.gene059842:CDS
GGAGAGTGAAGGAGAGAGGA+AGG 0.448282 2.4:-18166188 MS.gene059842:CDS
GATAGCTTTGAAGCGTGAAA+TGG 0.450247 2.4:-18161800 MS.gene059842:CDS
TATGGAGCATCTGTCTAATT+GGG 0.451352 2.4:-18162808 MS.gene059842:CDS
GCCGTCGTCTTTCTCTGAGC+TGG 0.460035 2.4:+18166471 None:intergenic
TGCGGTGAACTCTGGACGCT+TGG 0.462609 2.4:+18163287 None:intergenic
AGAGAAGAAGAGAAGGAAGA+AGG 0.462903 2.4:-18166098 MS.gene059842:CDS
AGAGGGAGGAAGAGAAGAGA+AGG 0.464264 2.4:-18166132 MS.gene059842:CDS
TGCTTACTACAGGCGTCAAA+TGG 0.465748 2.4:-18162259 MS.gene059842:CDS
GTACAAGCTCGGCAACTTTG+AGG 0.468697 2.4:-18161613 MS.gene059842:intron
GAGAGAAAGAGAAGAAGAGA+AGG 0.469323 2.4:-18166105 MS.gene059842:CDS
GCGAAGGAGGAGAGAGAGGG+AGG 0.470950 2.4:-18166146 MS.gene059842:CDS
TGAATCCGAACGGTCTGGTT+CGG 0.471389 2.4:-18166230 MS.gene059842:CDS
CAGTGATGATGAATCGGATT+CGG 0.471683 2.4:-18166284 MS.gene059842:CDS
GAGGAAGGAGAGGAAGAGGA+AGG 0.472491 2.4:-18166173 MS.gene059842:CDS
GAAGCGAAGGAGGAGAGAGA+GGG 0.475698 2.4:-18166149 MS.gene059842:CDS
ATAAACGACGCCGTAGGAAG+AGG 0.476653 2.4:-18166327 MS.gene059842:CDS
AGCTCAACTCAGGGAGGAGA+TGG 0.477202 2.4:-18161643 MS.gene059842:CDS
GGGAGGAAGAGAAGAGAAGG+AGG 0.478439 2.4:-18166129 MS.gene059842:CDS
CAAAGTTGCCGAGCTTGTAC+TGG 0.482943 2.4:+18161616 None:intergenic
ATATAGCAGTGATGATGAAT+CGG 0.488450 2.4:-18166290 MS.gene059842:CDS
ACGGCGTCGTTTATCGGAAT+CGG 0.494732 2.4:+18166336 None:intergenic
TGAAAGAGCAAGCTCAACTC+AGG 0.497411 2.4:-18161653 MS.gene059842:CDS
CTCCGTCGAAAAGAGATTCA+AGG 0.503180 2.4:-18166444 MS.gene059842:CDS
CTAATTTATGGGGAAAGTAT+GGG 0.505958 2.4:-18165991 MS.gene059842:CDS
AAAATGTCGAGAAACGTTAA+CGG 0.506060 2.4:-18166520 MS.gene059842:CDS
GTGAAGGAGAGAGGAAGGAG+AGG 0.507055 2.4:-18166183 MS.gene059842:CDS
TGAGCTACTATGCTTTCTAT+CGG 0.513887 2.4:+18166387 None:intergenic
AGGAGAAAGAAGAAGAGAGA+AGG 0.516908 2.4:-18166078 MS.gene059842:CDS
GGAGTCGGAGTATTCGGGTT+CGG 0.516960 2.4:-18166209 MS.gene059842:CDS
AGCGATGAATCCGAACGGTC+TGG 0.517575 2.4:-18166235 MS.gene059842:CDS
CGACTCCGAACCAGACCGTT+CGG 0.519381 2.4:+18166225 None:intergenic
CGTTAACGGTAATGGTGCTC+CGG 0.531901 2.4:-18166506 MS.gene059842:CDS
TTATAAGAAGGTTCAGCCTA+AGG 0.534176 2.4:-18162217 MS.gene059842:CDS
TTGAAGCGTGAAATGGAAAG+TGG 0.543422 2.4:-18161793 MS.gene059842:CDS
TCCAGAGTTCACCGCATGGT+TGG 0.557065 2.4:-18163280 MS.gene059842:CDS
ACAGTCTTGATGCTTACTAC+AGG 0.557804 2.4:-18162269 MS.gene059842:CDS
ATGGTTGGCAGAAGTTAAGC+TGG 0.573991 2.4:-18163265 MS.gene059842:intron
TTCTGGTTGCAGATTTATGG+AGG 0.575366 2.4:-18162498 MS.gene059842:intron
TGCTGCAATTCAGAGAAGGT+TGG 0.578757 2.4:-18161494 MS.gene059842:CDS
GTCGTCTTTCTCTGAGCTGG+TGG 0.580374 2.4:+18166474 None:intergenic
CTGCTGCTGCAATTCAGAGA+AGG 0.593367 2.4:-18161498 MS.gene059842:CDS
CCGTCTACACGGCAGCATCA+GGG 0.593619 2.4:+18161470 None:intergenic
CGAACGGTCTGGTTCGGAGT+CGG 0.599371 2.4:-18166224 MS.gene059842:CDS
GACGTGATTTCCTCTTCCTA+CGG 0.602909 2.4:+18166317 None:intergenic
ATGGCTTACCAGTACAAGCT+CGG 0.609457 2.4:-18161624 MS.gene059842:CDS
GTTCGGAGAGTGAAGGAGAG+AGG 0.618767 2.4:-18166192 MS.gene059842:CDS
TCAATGATGAAGAACAGCGC+AGG 0.631968 2.4:-18162182 MS.gene059842:intron
TATTCGGGTTCGGAGAGTGA+AGG 0.634912 2.4:-18166199 MS.gene059842:CDS
GAAAGAGCAAGCTCAACTCA+GGG 0.635642 2.4:-18161652 MS.gene059842:CDS
TTATTAGAGAAACTGATATG+TGG 0.644513 2.4:-18165967 MS.gene059842:intron
ATTCCGATAAACGACGCCGT+AGG 0.645227 2.4:-18166333 MS.gene059842:CDS
TATGTCCTACACCGTCTACA+CGG 0.651190 2.4:+18161459 None:intergenic
GGTGCTGTGACTAATTTATG+GGG 0.653975 2.4:-18166001 MS.gene059842:CDS
ACCAGCTCAGAGAAAGACGA+CGG 0.656673 2.4:-18166472 MS.gene059842:CDS
AGCGTCCAGAGTTCACCGCA+TGG 0.660448 2.4:-18163284 MS.gene059842:CDS
GCGTGAAATGGAAAGTGGAA+TGG 0.661059 2.4:-18161788 MS.gene059842:intron
CAGAGAGCGATGAATCCGAA+CGG 0.693318 2.4:-18166240 MS.gene059842:CDS
CTTAACTTCTGCCAACCATG+CGG 0.728245 2.4:+18163269 None:intergenic
AGAGCAAGCTCAACTCAGGG+AGG 0.732900 2.4:-18161649 MS.gene059842:CDS
GTAGGAAGAGGAAATCACGT+CGG 0.790615 2.4:-18166315 MS.gene059842:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTAAAAGAAAATATAATAT+AGG + chr2.4:18166033-18166052 None:intergenic 10.0%
!!! ATTATGGTTTAATTTTTTTA+TGG - chr2.4:18164440-18164459 MS.gene059842:intron 10.0%
!!! TTTTTTTTTTTTATCACTAT+AGG - chr2.4:18166470-18166489 MS.gene059842:CDS 10.0%
!! AAAATACAGCAAATTAAAAT+TGG + chr2.4:18165153-18165172 None:intergenic 15.0%
!! AAAATTAATAAAAAGAGAGA+AGG - chr2.4:18165258-18165277 MS.gene059842:intron 15.0%
!! AAGATAACTTATTTAATCTA+GGG - chr2.4:18162989-18163008 MS.gene059842:intron 15.0%
!! AAGATAACTTATTTAATGTA+GGG - chr2.4:18164029-18164048 MS.gene059842:intron 15.0%
!! AGAATTATAAGTAATAACTA+GGG - chr2.4:18162747-18162766 MS.gene059842:intron 15.0%
!! ATCATTATTGTATATTCATT+TGG - chr2.4:18165663-18165682 MS.gene059842:intron 15.0%
!! TAAGATAACTTATTTAATCT+AGG - chr2.4:18162988-18163007 MS.gene059842:intron 15.0%
!! TATGTTTATATTTACTCTTA+AGG - chr2.4:18165335-18165354 MS.gene059842:intron 15.0%
!! TCATTATTGTATATTCATTT+GGG - chr2.4:18165664-18165683 MS.gene059842:intron 15.0%
!!! TGTAGATATTTTATTGTATA+AGG - chr2.4:18163664-18163683 MS.gene059842:intron 15.0%
!!! TTTTGTTAATTAATGACAAA+AGG - chr2.4:18166270-18166289 MS.gene059842:CDS 15.0%
!! ATCAAGTCAATATGTTAAAA+TGG + chr2.4:18164420-18164439 None:intergenic 20.0%
!! CAAGATAACTTATTTAATGT+AGG - chr2.4:18164028-18164047 MS.gene059842:intron 20.0%
!! GAATAATAATAACTAGTAAC+AGG - chr2.4:18163798-18163817 MS.gene059842:intron 20.0%
!! GAGAATTATAAGTAATAACT+AGG - chr2.4:18162746-18162765 MS.gene059842:intron 20.0%
!! GATTGAATTATTGAATTATG+TGG - chr2.4:18162101-18162120 MS.gene059842:intron 20.0%
!! TAACTAATGTAATCTTAACT+TGG - chr2.4:18165853-18165872 MS.gene059842:intron 20.0%
!! TATATGTACTGAAATATCAT+GGG - chr2.4:18162194-18162213 MS.gene059842:CDS 20.0%
!! TTAGACTGGAAATTATATTT+AGG + chr2.4:18163316-18163335 None:intergenic 20.0%
!! TTATATGTACTGAAATATCA+TGG - chr2.4:18162193-18162212 MS.gene059842:CDS 20.0%
!!! AACATATTGACTTGATATTA+TGG - chr2.4:18164424-18164443 MS.gene059842:intron 20.0%
!!! AACTTGTTTAATGTATTGTA+GGG - chr2.4:18163376-18163395 MS.gene059842:intron 20.0%
!!! ATTGCAAATTGTTGTTAATA+TGG + chr2.4:18163942-18163961 None:intergenic 20.0%
!!! TAACTTGTTTAATGTATTGT+AGG - chr2.4:18163375-18163394 MS.gene059842:intron 20.0%
!!! TCATTTTTATGAATAGGATA+CGG - chr2.4:18165588-18165607 MS.gene059842:intron 20.0%
!!! TGTATTTTAACAGGTAAATA+TGG - chr2.4:18165165-18165184 MS.gene059842:intron 20.0%
!!! TTAATTTGCTGTATTTTAAC+AGG - chr2.4:18165156-18165175 MS.gene059842:intron 20.0%
! AATGGAAAAAGAGATGAAAA+AGG - chr2.4:18165750-18165769 MS.gene059842:intron 25.0%
! ACTAGAATGCCAAAATATAA+AGG + chr2.4:18165098-18165117 None:intergenic 25.0%
! ATGGAAAAAGAGATGAAAAA+GGG - chr2.4:18165751-18165770 MS.gene059842:intron 25.0%
! ATTACAAATTCAACTCCATT+TGG - chr2.4:18166406-18166425 MS.gene059842:CDS 25.0%
! CAAATGGTTTAATGTTTATG+TGG - chr2.4:18165691-18165710 MS.gene059842:intron 25.0%
! CAGCAAATTAAAATTGGATA+TGG + chr2.4:18165147-18165166 None:intergenic 25.0%
! CTAGAATGCCAAAATATAAA+GGG + chr2.4:18165097-18165116 None:intergenic 25.0%
! GTATCCTATTCATAAAAATG+AGG + chr2.4:18165589-18165608 None:intergenic 25.0%
! GTTAATTTCTCTCTAATTTC+TGG - chr2.4:18165476-18165495 MS.gene059842:intron 25.0%
! TAAACAATAGTAAAGCATGT+AGG + chr2.4:18165933-18165952 None:intergenic 25.0%
! TAATCTGTGTAAAGAAAACA+AGG + chr2.4:18164898-18164917 None:intergenic 25.0%
! TACTTTAGTGTTAAGAACTA+AGG - chr2.4:18163525-18163544 MS.gene059842:intron 25.0%
! TGAAAACATAGAATATGCAT+CGG - chr2.4:18163055-18163074 MS.gene059842:intron 25.0%
! TTAATAAAAAGAGAGAAGGA+TGG - chr2.4:18165262-18165281 MS.gene059842:intron 25.0%
! TTATTAGAGAAACTGATATG+TGG - chr2.4:18162024-18162043 MS.gene059842:intron 25.0%
!! AAATTGTTAAAAGCATGTTC+CGG + chr2.4:18162704-18162723 None:intergenic 25.0%
!! AGTTAAGCTGGTAATTATTT+TGG - chr2.4:18164738-18164757 MS.gene059842:intron 25.0%
!! ATCTTATTTCCAGTATATGT+CGG - chr2.4:18164921-18164940 MS.gene059842:intron 25.0%
!! ATCTTTCACCCTTTATATTT+TGG - chr2.4:18165086-18165105 MS.gene059842:intron 25.0%
!! ATTATTGTTATGCTTTGTTC+TGG - chr2.4:18162314-18162333 MS.gene059842:intron 25.0%
!! TAGGTCTTTAACTTCTAAAA+AGG + chr2.4:18164195-18164214 None:intergenic 25.0%
!! TTTTTGTGCAATAATTTTGC+AGG - chr2.4:18166306-18166325 MS.gene059842:CDS 25.0%
!!! AGTGTAGATTTTGAAATTCT+AGG - chr2.4:18162132-18162151 MS.gene059842:intron 25.0%
!!! AGTTGATAGAGTTAAAACAT+AGG - chr2.4:18163431-18163450 MS.gene059842:intron 25.0%
!!! AGTTGATAGAGTTTAAACAT+AGG - chr2.4:18164082-18164101 MS.gene059842:intron 25.0%
!!! ATCTTAACTTGGTTTTCTTT+TGG - chr2.4:18165864-18165883 MS.gene059842:intron 25.0%
!!! CTTTCATGATCATTTTTCAA+TGG - chr2.4:18166115-18166134 MS.gene059842:CDS 25.0%
!!! GATATGTGGTAAGAATTTTT+TGG - chr2.4:18162038-18162057 MS.gene059842:intron 25.0%
!!! GTATGTGAATCTTTTAAGAT+TGG - chr2.4:18162724-18162743 MS.gene059842:intron 25.0%
!!! TGGTAAGAATTTTTTGGTTT+TGG - chr2.4:18162044-18162063 MS.gene059842:intron 25.0%
!!! TTGTCCTCATTTTTATGAAT+AGG - chr2.4:18165582-18165601 MS.gene059842:intron 25.0%
AATAATGTCTTCGAAGATGA+AGG - chr2.4:18163989-18164008 MS.gene059842:intron 30.0%
AATAGCTTCAGAAATTCATG+TGG - chr2.4:18164054-18164073 MS.gene059842:intron 30.0%
AATGAAGAAGAAGGAGAAAA+AGG - chr2.4:18161953-18161972 MS.gene059842:intron 30.0%
AATGGGCAAAATTTACATCT+AGG - chr2.4:18163498-18163517 MS.gene059842:intron 30.0%
ACTAATTTATGGGGAAAGTA+TGG - chr2.4:18161999-18162018 MS.gene059842:intron 30.0%
AGTGATGTTATGAATATTGC+AGG - chr2.4:18164680-18164699 MS.gene059842:intron 30.0%
ATATAGGTAGACTTCTACAA+TGG + chr2.4:18166017-18166036 None:intergenic 30.0%
ATTACACTGGAAGCTATATT+CGG + chr2.4:18162935-18162954 None:intergenic 30.0%
ATTTGCATGTCATGTTTACA+TGG - chr2.4:18165120-18165139 MS.gene059842:intron 30.0%
CAAATTGCATAAAAGTGATC+TGG + chr2.4:18166239-18166258 None:intergenic 30.0%
CATTAATATCCTGTGAACTA+TGG - chr2.4:18164637-18164656 MS.gene059842:intron 30.0%
GAAACGAAAAATGAAGAAGA+AGG - chr2.4:18161944-18161963 MS.gene059842:intron 30.0%
GAGACTTAAGCTAAAAAAGA+AGG + chr2.4:18166433-18166452 None:intergenic 30.0%
GATGAAAAAGGGTTATAAGA+AGG - chr2.4:18165762-18165781 MS.gene059842:intron 30.0%
TAAAACATAGGAATATGCAC+CGG - chr2.4:18163443-18163462 MS.gene059842:intron 30.0%
TAATTTCCAGTCTAATCTCT+TGG - chr2.4:18163321-18163340 MS.gene059842:intron 30.0%
TACAACCTAATGCTGTATAA+GGG - chr2.4:18163223-18163242 MS.gene059842:intron 30.0%
TAGCAGCAGAAATTAATATG+TGG - chr2.4:18163016-18163035 MS.gene059842:intron 30.0%
TATAAGTAATAACTAGGGAC+AGG - chr2.4:18162752-18162771 MS.gene059842:intron 30.0%
TGAATCATGTAAGATTGCAT+TGG - chr2.4:18163771-18163790 MS.gene059842:intron 30.0%
TGCAGTCATTATCTTGTAAT+GGG - chr2.4:18163481-18163500 MS.gene059842:intron 30.0%
TTCATAACATCACTCAAACA+AGG + chr2.4:18164674-18164693 None:intergenic 30.0%
TTGATCGAAAGATTTCAGAT+TGG - chr2.4:18162269-18162288 MS.gene059842:CDS 30.0%
TTGCAGTCATTATCTTGTAA+TGG - chr2.4:18163480-18163499 MS.gene059842:intron 30.0%
TTTATTGTAGTCGTTATCTC+AGG - chr2.4:18163088-18163107 MS.gene059842:intron 30.0%
TTTGCAAAAACTCAAACTAG+TGG - chr2.4:18164837-18164856 MS.gene059842:intron 30.0%
! ATATAGCAGTGATGATGAAT+CGG - chr2.4:18161701-18161720 MS.gene059842:intron 30.0%
! CTAATTTATGGGGAAAGTAT+GGG - chr2.4:18162000-18162019 MS.gene059842:intron 30.0%
! GCTGTAAAGAATCTCTATTT+TGG - chr2.4:18162863-18162882 MS.gene059842:intron 30.0%
! GTTTTTGCAAAAATGAACAG+AGG + chr2.4:18164828-18164847 None:intergenic 30.0%
! TAACAATCTGGAGGAATTTT+AGG + chr2.4:18163568-18163587 None:intergenic 30.0%
! TGCATATTTTTCTTGCCTAT+TGG - chr2.4:18165027-18165046 MS.gene059842:intron 30.0%
!! AATTTCTGGTTGCAGATTTA+TGG - chr2.4:18165490-18165509 MS.gene059842:intron 30.0%
!! GAAAGTGGAATTTGTTAAAG+TGG + chr2.4:18163881-18163900 None:intergenic 30.0%
!! GTTGCAAAGTGTTGTTAAAA+TGG + chr2.4:18162899-18162918 None:intergenic 30.0%
!! TATTCATTTGGGTTGACAAA+TGG - chr2.4:18165675-18165694 MS.gene059842:intron 30.0%
!!! CATTTCACTTTTTGCCTATT+TGG + chr2.4:18162801-18162820 None:intergenic 30.0%
!!! TTTCACTTTTTGTCCTGTTT+TGG + chr2.4:18163846-18163865 None:intergenic 30.0%
!!! TTTTAGGTACTTTAGGACTT+AGG + chr2.4:18163552-18163571 None:intergenic 30.0%
AAAAAGAGAGAAGGATGGAA+AGG - chr2.4:18165267-18165286 MS.gene059842:intron 35.0%
AAAAAGGAAAGAGGGAAGAA+AGG - chr2.4:18161969-18161988 MS.gene059842:intron 35.0%
AAGAAGGAGAAAAAGGAAAG+AGG - chr2.4:18161960-18161979 MS.gene059842:intron 35.0%
AATAGGGGTAGAGTAAGTTT+GGG + chr2.4:18165902-18165921 None:intergenic 35.0%
ACAATTGACATGTCATGATG+TGG - chr2.4:18162555-18162574 MS.gene059842:intron 35.0%
ACTTTCTGTTTAGAAGCTAG+AGG - chr2.4:18163144-18163163 MS.gene059842:intron 35.0%
AGAAGGAGAAAAAGGAAAGA+GGG - chr2.4:18161961-18161980 MS.gene059842:intron 35.0%
AGCAGCAGAAATTCATATCT+AGG - chr2.4:18163404-18163423 MS.gene059842:intron 35.0%
AGCATGTGATTGGATATTGA+AGG - chr2.4:18163587-18163606 MS.gene059842:intron 35.0%
AGTTAGCGATGATTTCTTCT+AGG - chr2.4:18162490-18162509 MS.gene059842:intron 35.0%
ATCGGATTGTGTGTCTATAT+CGG + chr2.4:18161589-18161608 None:intergenic 35.0%
ATGGAAAGGAACAGAAAAAG+TGG - chr2.4:18165281-18165300 MS.gene059842:intron 35.0%
ATGTAGGTAGCTAACAATAG+GGG + chr2.4:18165917-18165936 None:intergenic 35.0%
CATGTAGGTAGCTAACAATA+GGG + chr2.4:18165918-18165937 None:intergenic 35.0%
CTAAACCCTTATACAGCATT+AGG + chr2.4:18163231-18163250 None:intergenic 35.0%
CTAACTCGTGATTCAGTTTA+AGG + chr2.4:18162476-18162495 None:intergenic 35.0%
CTAATGCTGTATAAGGGTTT+AGG - chr2.4:18163229-18163248 MS.gene059842:intron 35.0%
CTTCGAAGACATTATTAGAC+TGG + chr2.4:18163985-18164004 None:intergenic 35.0%
GAAAAGAAATGCAGTCCAAT+AGG + chr2.4:18165045-18165064 None:intergenic 35.0%
GCAATTTCTCTCCTGAATAT+AGG - chr2.4:18163957-18163976 MS.gene059842:intron 35.0%
GCATGTGATTGGATATTGAA+GGG - chr2.4:18163588-18163607 MS.gene059842:intron 35.0%
GCTAAAAAAGAAGGTCCAAA+TGG + chr2.4:18166424-18166443 None:intergenic 35.0%
GCTCTAGCAGAAGTTTAATT+TGG - chr2.4:18165551-18165570 MS.gene059842:intron 35.0%
GTACAACCTAATGCTGTATA+AGG - chr2.4:18163222-18163241 MS.gene059842:intron 35.0%
GTACTGAAATATCATGGGAT+TGG - chr2.4:18162199-18162218 MS.gene059842:CDS 35.0%
GTGATTATCAGCAAGTCAAT+AGG + chr2.4:18165415-18165434 None:intergenic 35.0%
GTTAGCGATGATTTCTTCTA+GGG - chr2.4:18162491-18162510 MS.gene059842:intron 35.0%
GTTAGTATGTGACTGGATAT+TGG - chr2.4:18164239-18164258 MS.gene059842:intron 35.0%
TAAGAGAGAGCTGTTCAATT+CGG + chr2.4:18162533-18162552 None:intergenic 35.0%
TACCAAAATCCATAGTTCAC+AGG + chr2.4:18164649-18164668 None:intergenic 35.0%
TCTTTACAGCATACTGAAAC+TGG + chr2.4:18162853-18162872 None:intergenic 35.0%
TGAGCTACTATGCTTTCTAT+CGG + chr2.4:18161607-18161626 None:intergenic 35.0%
TGCAATAAACCATTAACAGC+CGG + chr2.4:18163465-18163484 None:intergenic 35.0%
TGGTTTAATGTTTATGTGGC+AGG - chr2.4:18165695-18165714 MS.gene059842:intron 35.0%
TGTAATCTCTTGGAAGATGA+AGG - chr2.4:18162949-18162968 MS.gene059842:intron 35.0%
TGTTCTCTTGACATCCAAAT+AGG - chr2.4:18162784-18162803 MS.gene059842:intron 35.0%
TTACACTGGAAGCTATATTC+GGG + chr2.4:18162934-18162953 None:intergenic 35.0%
TTAGACTGGAACCTATATTC+AGG + chr2.4:18163971-18163990 None:intergenic 35.0%
TTATAAGAAGGTTCAGCCTA+AGG - chr2.4:18165774-18165793 MS.gene059842:intron 35.0%
TTGAAAACTGTTCGTTCCTT+AGG + chr2.4:18165793-18165812 None:intergenic 35.0%
TTTGAGTACCTACGTTCTAA+AGG - chr2.4:18164541-18164560 MS.gene059842:intron 35.0%
! AAATCATCAGCCTGCATTTT+TGG - chr2.4:18164576-18164595 MS.gene059842:intron 35.0%
! AGGTGCTGTGACTAATTTAT+GGG - chr2.4:18161989-18162008 MS.gene059842:intron 35.0%
! ATATGGAGCATCTGTCTAAT+TGG - chr2.4:18165182-18165201 MS.gene059842:intron 35.0%
! ATCCTGTGAACTATGGATTT+TGG - chr2.4:18164644-18164663 MS.gene059842:intron 35.0%
! GCAAGTCAATAGGTTAGTTA+AGG + chr2.4:18165405-18165424 None:intergenic 35.0%
! GCTGTAAAGAATCGTTGTTT+TGG - chr2.4:18163906-18163925 MS.gene059842:intron 35.0%
! TATAAGGGTTTAGGAAGTGT+TGG - chr2.4:18163238-18163257 MS.gene059842:intron 35.0%
! TATGGAGCATCTGTCTAATT+GGG - chr2.4:18165183-18165202 MS.gene059842:intron 35.0%
! TTCCTTGAATCTCTTTTCGA+CGG + chr2.4:18161552-18161571 None:intergenic 35.0%
! TTCTTTTACTGCACTTCAAG+TGG - chr2.4:18166043-18166062 MS.gene059842:CDS 35.0%
! TTTCCTTGAGTTGCAAGATT+AGG + chr2.4:18165238-18165257 None:intergenic 35.0%
!! AAGGTGCTGTGACTAATTTA+TGG - chr2.4:18161988-18162007 MS.gene059842:intron 35.0%
!! ATTTAGTTTGATGGCTTGAG+TGG - chr2.4:18162342-18162361 MS.gene059842:intron 35.0%
!! GAAGTGTTTTCAGTTGCTTT+AGG + chr2.4:18164214-18164233 None:intergenic 35.0%
!! GGAGGAATTTTAGGTACTTT+AGG + chr2.4:18163559-18163578 None:intergenic 35.0%
!! TCAGTTTGTTAGTATGTGAC+TGG - chr2.4:18164232-18164251 MS.gene059842:intron 35.0%
!! TGGACTGTGAAAGTTTTTAG+TGG - chr2.4:18162219-18162238 MS.gene059842:CDS 35.0%
!! TTCTGCTAGAGCTTACTTTT+TGG + chr2.4:18165543-18165562 None:intergenic 35.0%
!! TTCTTCTAGGGTTTCTCATA+TGG - chr2.4:18162503-18162522 MS.gene059842:intron 35.0%
!!! CTAGAGCTTACTTTTTGGAA+GGG + chr2.4:18165538-18165557 None:intergenic 35.0%
AAACTAAGGTAGCCAGCAAT+AGG + chr2.4:18164320-18164339 None:intergenic 40.0%
AAGAGAGAGCTGTTCAATTC+GGG + chr2.4:18162532-18162551 None:intergenic 40.0%
AATCTCTTGGAAGATGAAGG+TGG - chr2.4:18162952-18162971 MS.gene059842:intron 40.0%
ACAGTCTTGATGCTTACTAC+AGG - chr2.4:18165722-18165741 MS.gene059842:intron 40.0%
ACCAACAAAACGGATCAATG+CGG + chr2.4:18162662-18162681 None:intergenic 40.0%
AGAGAAGAAGAGAAGGAAGA+AGG - chr2.4:18161893-18161912 MS.gene059842:intron 40.0%
AGCATGCGATTGGATATTGA+AGG - chr2.4:18163200-18163219 MS.gene059842:intron 40.0%
AGGAGAAAGAAGAAGAGAGA+AGG - chr2.4:18161913-18161932 MS.gene059842:intron 40.0%
AGTATGTGACTGGATATTGG+AGG - chr2.4:18164242-18164261 MS.gene059842:intron 40.0%
AGTGGCGTTGTTAGTGTATA+AGG - chr2.4:18162237-18162256 MS.gene059842:CDS 40.0%
ATCACATGCTAACAATCTGG+AGG + chr2.4:18163577-18163596 None:intergenic 40.0%
ATGATGTGGTCATCATCTCA+CGG - chr2.4:18162569-18162588 MS.gene059842:intron 40.0%
CAATAGGGGTAGAGTAAGTT+TGG + chr2.4:18165903-18165922 None:intergenic 40.0%
CATCTTCCAAGAGATTACAC+TGG + chr2.4:18162948-18162967 None:intergenic 40.0%
CCAATCACATGCTAACAATC+TGG + chr2.4:18163580-18163599 None:intergenic 40.0%
CCAGATTGTTAGCATGTGAT+TGG - chr2.4:18163577-18163596 MS.gene059842:intron 40.0%
CCTCTTGCAAATGCAAACTA+AGG + chr2.4:18164334-18164353 None:intergenic 40.0%
CTAATACTGTAGAGTGGTCT+AGG - chr2.4:18163616-18163635 MS.gene059842:intron 40.0%
CTAGACCACTCTACAGTATT+AGG + chr2.4:18163618-18163637 None:intergenic 40.0%
GAACAGAAAAAGTGGCACAT+AGG - chr2.4:18165289-18165308 MS.gene059842:intron 40.0%
GAAGAGTTGACAGAGTGAAA+AGG + chr2.4:18165992-18166011 None:intergenic 40.0%
GAATATGCACCAACTGTTGA+TGG - chr2.4:18164104-18164123 MS.gene059842:intron 40.0%
GACATCCTAATACTGTAGAG+TGG - chr2.4:18163610-18163629 MS.gene059842:intron 40.0%
GAGAGAAAGAGAAGAAGAGA+AGG - chr2.4:18161886-18161905 MS.gene059842:intron 40.0%
GCAAGTACGTGAAAAACAGA+AGG - chr2.4:18166158-18166177 MS.gene059842:CDS 40.0%
GCATGTAGGTAGCTAACAAT+AGG + chr2.4:18165919-18165938 None:intergenic 40.0%
GGACAACCTAATGTTATAGC+GGG - chr2.4:18164264-18164283 MS.gene059842:intron 40.0%
GGGACAACCTAATGTTATAG+CGG - chr2.4:18164263-18164282 MS.gene059842:intron 40.0%
GTATGTGACTGGATATTGGA+GGG - chr2.4:18164243-18164262 MS.gene059842:intron 40.0%
GTCTCCATGATATGTCATCA+TGG - chr2.4:18162635-18162654 MS.gene059842:intron 40.0%
TAGCTTCCAGTGTAATCTCT+TGG - chr2.4:18162939-18162958 MS.gene059842:intron 40.0%
TCACAGAACAAGGATGTACA+CGG + chr2.4:18165614-18165633 None:intergenic 40.0%
TCGAGAAACGTTAACGGTAA+TGG - chr2.4:18161477-18161496 MS.gene059842:CDS 40.0%
TCTTTACAGCATGCTGAAAG+TGG + chr2.4:18163896-18163915 None:intergenic 40.0%
TGCAACAAACCATCAACAGT+TGG + chr2.4:18164116-18164135 None:intergenic 40.0%
TGTTCACATGACACCAAAAC+AGG - chr2.4:18163830-18163849 MS.gene059842:intron 40.0%
TTAGATTGCTAGCATGCGAT+TGG - chr2.4:18163190-18163209 MS.gene059842:intron 40.0%
TTGAAGCGTGAAATGGAAAG+TGG - chr2.4:18166198-18166217 MS.gene059842:CDS 40.0%
TTGCAACATTTCTTGTCTGC+AGG + chr2.4:18166142-18166161 None:intergenic 40.0%
TTTCCAAGACTACAGTCACA+TGG - chr2.4:18164357-18164376 MS.gene059842:intron 40.0%
! ATGAGCATCCTTTTCTCTTG+TGG + chr2.4:18165363-18165382 None:intergenic 40.0%
! CAGTGATGATGAATCGGATT+CGG - chr2.4:18161707-18161726 MS.gene059842:intron 40.0%
! GGTGCTGTGACTAATTTATG+GGG - chr2.4:18161990-18162009 MS.gene059842:intron 40.0%
! TTAAAAGCATGTTCCGGACT+GGG + chr2.4:18162698-18162717 None:intergenic 40.0%
! TTAAGGTGCCACAAGAGAAA+AGG - chr2.4:18165352-18165371 MS.gene059842:intron 40.0%
! TTCCTCTTCCTTTTTCTGTG+TGG - chr2.4:18164801-18164820 MS.gene059842:intron 40.0%
! TTCTGGTTGCAGATTTATGG+AGG - chr2.4:18165493-18165512 MS.gene059842:intron 40.0%
! TTTTGCCAAAGCGTAAGTCA+CGG + chr2.4:18164148-18164167 None:intergenic 40.0%
!! CATTGATCCGTTTTGTTGGT+GGG - chr2.4:18162662-18162681 MS.gene059842:intron 40.0%
!! CCTTAGTTTGCATTTGCAAG+AGG - chr2.4:18164331-18164350 MS.gene059842:intron 40.0%
!! CTAATGTTATAGCGGGTCTA+GGG - chr2.4:18164271-18164290 MS.gene059842:intron 40.0%
!! CTGGAGTGGATTTAGTTTGA+TGG - chr2.4:18162333-18162352 MS.gene059842:intron 40.0%
!! GATAGCTTTGAAGCGTGAAA+TGG - chr2.4:18166191-18166210 MS.gene059842:CDS 40.0%
!! GTCGAGAGTGTAAGGTTTTA+GGG - chr2.4:18162435-18162454 MS.gene059842:intron 40.0%
!! TCGACCATTCACTGACTTAT+CGG + chr2.4:18162420-18162439 None:intergenic 40.0%
!! TGTTATGCTTTGTTCTGGAG+TGG - chr2.4:18162319-18162338 MS.gene059842:intron 40.0%
!!! GCTAGAGCTTACTTTTTGGA+AGG + chr2.4:18165539-18165558 None:intergenic 40.0%
ACAGAGGACCACACAGAAAA+AGG + chr2.4:18164812-18164831 None:intergenic 45.0%
ACTGTAGAGTGGTCTAGGAA+GGG - chr2.4:18163621-18163640 MS.gene059842:intron 45.0%
ATGGCTTACCAGTACAAGCT+CGG - chr2.4:18166367-18166386 MS.gene059842:CDS 45.0%
ATGGTTGGCAGAAGTTAAGC+TGG - chr2.4:18164726-18164745 MS.gene059842:intron 45.0%
CAGCTTCCAAGAGATTAGAC+TGG + chr2.4:18163330-18163349 None:intergenic 45.0%
CATCTCATCGTCACAGAACA+AGG + chr2.4:18165624-18165643 None:intergenic 45.0%
CCTAGACCCGCTATAACATT+AGG + chr2.4:18164273-18164292 None:intergenic 45.0%
CGGACCATGATGACATATCA+TGG + chr2.4:18162642-18162661 None:intergenic 45.0%
CTCCGTCGAAAAGAGATTCA+AGG - chr2.4:18161547-18161566 MS.gene059842:intron 45.0%
CTTAACTTCTGCCAACCATG+CGG + chr2.4:18164725-18164744 None:intergenic 45.0%
CTTCCATGTGACTGTAGTCT+TGG + chr2.4:18164363-18164382 None:intergenic 45.0%
CTTTACATCATCCTGCGACT+GGG - chr2.4:18164863-18164882 MS.gene059842:intron 45.0%
GAAAGAGCAAGCTCAACTCA+GGG - chr2.4:18166339-18166358 MS.gene059842:CDS 45.0%
GACCACACAGAAAAAGGAAG+AGG + chr2.4:18164806-18164825 None:intergenic 45.0%
GACGTGATTTCCTCTTCCTA+CGG + chr2.4:18161677-18161696 None:intergenic 45.0%
GATGAATCGGATTCGGATTC+CGG - chr2.4:18161714-18161733 MS.gene059842:intron 45.0%
GCAAACTCAGCCAAAAATGC+AGG + chr2.4:18164589-18164608 None:intergenic 45.0%
GCACCTAATCTTGCAACTCA+AGG - chr2.4:18165232-18165251 MS.gene059842:intron 45.0%
GCGTGAAATGGAAAGTGGAA+TGG - chr2.4:18166203-18166222 MS.gene059842:CDS 45.0%
GTAGGAAGAGGAAATCACGT+CGG - chr2.4:18161676-18161695 MS.gene059842:intron 45.0%
TACTGTAGAGTGGTCTAGGA+AGG - chr2.4:18163620-18163639 MS.gene059842:intron 45.0%
TCAATGATGAAGAACAGCGC+AGG - chr2.4:18165809-18165828 MS.gene059842:intron 45.0%
TCAGTGTCACCGACATATAC+TGG + chr2.4:18164933-18164952 None:intergenic 45.0%
TCTGCCGATAAGTCAGTGAA+TGG - chr2.4:18162413-18162432 MS.gene059842:intron 45.0%
TCTTTACATCATCCTGCGAC+TGG - chr2.4:18164862-18164881 MS.gene059842:intron 45.0%
TGAAAGAGCAAGCTCAACTC+AGG - chr2.4:18166338-18166357 MS.gene059842:CDS 45.0%
TGATGTGGTCATCATCTCAC+GGG - chr2.4:18162570-18162589 MS.gene059842:intron 45.0%
TGCTGCAATTCAGAGAAGGT+TGG - chr2.4:18166497-18166516 MS.gene059842:CDS 45.0%
TGCTTACTACAGGCGTCAAA+TGG - chr2.4:18165732-18165751 MS.gene059842:intron 45.0%
TGGAAGATGAAGGTGGTTGT+TGG - chr2.4:18162959-18162978 MS.gene059842:intron 45.0%
TTATCCCGTGACTTACGCTT+TGG - chr2.4:18164140-18164159 MS.gene059842:intron 45.0%
TTTGCCAAAGCGTAAGTCAC+GGG + chr2.4:18164147-18164166 None:intergenic 45.0%
! AGTGAATGGTCGAGAGTGTA+AGG - chr2.4:18162427-18162446 MS.gene059842:intron 45.0%
! GTTAAAAGCATGTTCCGGAC+TGG + chr2.4:18162699-18162718 None:intergenic 45.0%
!! CCTAATGTTATAGCGGGTCT+AGG - chr2.4:18164270-18164289 MS.gene059842:intron 45.0%
!! GAATATGCACCGGCTGTTAA+TGG - chr2.4:18163453-18163472 MS.gene059842:intron 45.0%
!! GAATATGCATCGGCTGTTGA+TGG - chr2.4:18163065-18163084 MS.gene059842:intron 45.0%
!! GCATTGATCCGTTTTGTTGG+TGG - chr2.4:18162661-18162680 MS.gene059842:intron 45.0%
!! GGTCGAGAGTGTAAGGTTTT+AGG - chr2.4:18162434-18162453 MS.gene059842:intron 45.0%
!! TCCGCATTGATCCGTTTTGT+TGG - chr2.4:18162658-18162677 MS.gene059842:intron 45.0%
ACCAGCTCAGAGAAAGACGA+CGG - chr2.4:18161519-18161538 MS.gene059842:intron 50.0%
ACGGCGTCGTTTATCGGAAT+CGG + chr2.4:18161658-18161677 None:intergenic 50.0%
AGAGGGAGGAAGAGAAGAGA+AGG - chr2.4:18161859-18161878 MS.gene059842:intron 50.0%
AGTCCAGCCCACCAACAAAA+CGG + chr2.4:18162672-18162691 None:intergenic 50.0%
AGTCTTGACGCAACAGTTGG+AGG + chr2.4:18164396-18164415 None:intergenic 50.0%
ATAAACGACGCCGTAGGAAG+AGG - chr2.4:18161664-18161683 MS.gene059842:CDS 50.0%
ATCCACTGCAGACCTATTGC+TGG - chr2.4:18164305-18164324 MS.gene059842:intron 50.0%
ATCGGATTCGGATTCCGGTT+CGG - chr2.4:18161719-18161738 MS.gene059842:intron 50.0%
ATGGCTTGAGTGGCTGAGTA+TGG - chr2.4:18162352-18162371 MS.gene059842:intron 50.0%
ATTCCGATAAACGACGCCGT+AGG - chr2.4:18161658-18161677 MS.gene059842:CDS 50.0%
CAAAGTTGCCGAGCTTGTAC+TGG + chr2.4:18166378-18166397 None:intergenic 50.0%
CAGAGAGCGATGAATCCGAA+CGG - chr2.4:18161751-18161770 MS.gene059842:intron 50.0%
CTGCTGCTGCAATTCAGAGA+AGG - chr2.4:18166493-18166512 MS.gene059842:CDS 50.0%
CTGTAGAGTGGTCTAGGAAG+GGG - chr2.4:18163622-18163641 MS.gene059842:intron 50.0%
CTTCCTACGGCGTCGTTTAT+CGG + chr2.4:18161664-18161683 None:intergenic 50.0%
GGAAGTCTTGACGCAACAGT+TGG + chr2.4:18164399-18164418 None:intergenic 50.0%
GTACAAGCTCGGCAACTTTG+AGG - chr2.4:18166378-18166397 MS.gene059842:CDS 50.0%
TGAATCCGAACGGTCTGGTT+CGG - chr2.4:18161761-18161780 MS.gene059842:intron 50.0%
TGGAAGCTGACAGTAGTTGC+TGG - chr2.4:18163341-18163360 MS.gene059842:intron 50.0%
! CGTTAACGGTAATGGTGCTC+CGG - chr2.4:18161485-18161504 MS.gene059842:CDS 50.0%
! TATTCGGGTTCGGAGAGTGA+AGG - chr2.4:18161792-18161811 MS.gene059842:CDS 50.0%
! TGGTTCGGAGTCGGAGTATT+CGG - chr2.4:18161776-18161795 MS.gene059842:intron 50.0%
!! CAGCACGACCTTTAGAACGT+AGG + chr2.4:18164552-18164571 None:intergenic 50.0%
!! TATAGCGGGTCTAGGGAAGA+GGG - chr2.4:18164278-18164297 MS.gene059842:intron 50.0%
!! TTATAGCGGGTCTAGGGAAG+AGG - chr2.4:18164277-18164296 MS.gene059842:intron 50.0%
!! TTCGGATTCCGGTTCGGATT+CGG - chr2.4:18161725-18161744 MS.gene059842:intron 50.0%
!!! TTTTGTTGGTGGGCTGGACT+TGG - chr2.4:18162672-18162691 MS.gene059842:intron 50.0%
AGAAGCGAAGGAGGAGAGAG+AGG - chr2.4:18161841-18161860 MS.gene059842:CDS 55.0%
AGAGCAAGCTCAACTCAGGG+AGG - chr2.4:18166342-18166361 MS.gene059842:CDS 55.0%
AGAGGAAGGAGAAGCGAAGG+AGG - chr2.4:18161832-18161851 MS.gene059842:CDS 55.0%
AGCCAGCAATAGGTCTGCAG+TGG + chr2.4:18164310-18164329 None:intergenic 55.0%
AGCGATGAATCCGAACGGTC+TGG - chr2.4:18161756-18161775 MS.gene059842:intron 55.0%
AGCTCAACTCAGGGAGGAGA+TGG - chr2.4:18166348-18166367 MS.gene059842:CDS 55.0%
ATTGAGTCTCTGGACTCGCC+TGG - chr2.4:18162597-18162616 MS.gene059842:intron 55.0%
CAAGTTCACCACCACCTCTG+TGG + chr2.4:18162386-18162405 None:intergenic 55.0%
CTCTGACTCCGAATCCGAAC+CGG + chr2.4:18161736-18161755 None:intergenic 55.0%
GAAGCGAAGGAGGAGAGAGA+GGG - chr2.4:18161842-18161861 MS.gene059842:CDS 55.0%
GAGAGAGGAAGGAGAGGAAG+AGG - chr2.4:18161814-18161833 MS.gene059842:CDS 55.0%
GAGGAAGGAGAGGAAGAGGA+AGG - chr2.4:18161818-18161837 MS.gene059842:CDS 55.0%
GCGAGTCCAGAGACTCAATC+AGG + chr2.4:18162596-18162615 None:intergenic 55.0%
GGAAAACATCTCCCAGTCGC+AGG + chr2.4:18164877-18164896 None:intergenic 55.0%
GGAAGAGGAAGGAGAAGCGA+AGG - chr2.4:18161829-18161848 MS.gene059842:CDS 55.0%
GGAGAGTGAAGGAGAGAGGA+AGG - chr2.4:18161803-18161822 MS.gene059842:CDS 55.0%
GGGAGGAAGAGAAGAGAAGG+AGG - chr2.4:18161862-18161881 MS.gene059842:intron 55.0%
GTCGTCTTTCTCTGAGCTGG+TGG + chr2.4:18161520-18161539 None:intergenic 55.0%
GTGAAGGAGAGAGGAAGGAG+AGG - chr2.4:18161808-18161827 MS.gene059842:CDS 55.0%
GTTCGGAGAGTGAAGGAGAG+AGG - chr2.4:18161799-18161818 MS.gene059842:CDS 55.0%
TAGAGTGGTCTAGGAAGGGG+CGG - chr2.4:18163625-18163644 MS.gene059842:intron 55.0%
TCCAGAGTTCACCGCATGGT+TGG - chr2.4:18164711-18164730 MS.gene059842:intron 55.0%
TGACGCAACAGTTGGAGGCT+TGG + chr2.4:18164391-18164410 None:intergenic 55.0%
TTCACCACCACCTCTGTGGA+GGG + chr2.4:18162382-18162401 None:intergenic 55.0%
TTGAGTCTCTGGACTCGCCT+GGG - chr2.4:18162598-18162617 MS.gene059842:intron 55.0%
! GGAGTCGGAGTATTCGGGTT+CGG - chr2.4:18161782-18161801 MS.gene059842:intron 55.0%
! GGTTCGGAGTCGGAGTATTC+GGG - chr2.4:18161777-18161796 MS.gene059842:intron 55.0%
!! GATCCGTTTTGTTGGTGGGC+TGG - chr2.4:18162666-18162685 MS.gene059842:intron 55.0%
AGCGTCCAGAGTTCACCGCA+TGG - chr2.4:18164707-18164726 MS.gene059842:intron 60.0%
CACGGGCCTGATTGAGTCTC+TGG - chr2.4:18162587-18162606 MS.gene059842:intron 60.0%
CGACTCCGAACCAGACCGTT+CGG + chr2.4:18161769-18161788 None:intergenic 60.0%
CTCGCCTGGGTGTGCTTCTA+TGG - chr2.4:18162611-18162630 MS.gene059842:intron 60.0%
GCCAACCATGCGGTGAACTC+TGG + chr2.4:18164715-18164734 None:intergenic 60.0%
GCCGTCGTCTTTCTCTGAGC+TGG + chr2.4:18161523-18161542 None:intergenic 60.0%
GTATGGCATCCCCTCCACAG+AGG - chr2.4:18162369-18162388 MS.gene059842:intron 60.0%
GTTCACCACCACCTCTGTGG+AGG + chr2.4:18162383-18162402 None:intergenic 60.0%
TCACCACCACCTCTGTGGAG+GGG + chr2.4:18162381-18162400 None:intergenic 60.0%
TGCGGTGAACTCTGGACGCT+TGG + chr2.4:18164707-18164726 None:intergenic 60.0%
! GACGCCATAGAAGCACACCC+AGG + chr2.4:18162618-18162637 None:intergenic 60.0%
!! CGAACGGTCTGGTTCGGAGT+CGG - chr2.4:18161767-18161786 MS.gene059842:intron 60.0%
!! GAGCTGGTGGCGATTTTCGC+CGG + chr2.4:18161507-18161526 None:intergenic 60.0%
CATCCCCTCCACAGAGGTGG+TGG - chr2.4:18162375-18162394 MS.gene059842:intron 65.0%
GCGAAGGAGGAGAGAGAGGG+AGG - chr2.4:18161845-18161864 MS.gene059842:CDS 65.0%
GCGGGTCTAGGGAAGAGGGT+AGG - chr2.4:18164282-18164301 MS.gene059842:intron 65.0%
TGGCATCCCCTCCACAGAGG+TGG - chr2.4:18162372-18162391 MS.gene059842:intron 65.0%
GGGCTGGACTTGGCCCAGTC+CGG - chr2.4:18162682-18162701 MS.gene059842:intron 70.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 18161474 18166539 18161474 ID=MS.gene059842
chr2.4 mRNA 18161474 18166539 18161474 ID=MS.gene059842.t1;Parent=MS.gene059842
chr2.4 exon 18165968 18166539 18165968 ID=MS.gene059842.t1.exon1;Parent=MS.gene059842.t1
chr2.4 CDS 18165968 18166539 18165968 ID=cds.MS.gene059842.t1;Parent=MS.gene059842.t1
chr2.4 exon 18163266 18163311 18163266 ID=MS.gene059842.t1.exon2;Parent=MS.gene059842.t1
chr2.4 CDS 18163266 18163311 18163266 ID=cds.MS.gene059842.t1;Parent=MS.gene059842.t1
chr2.4 exon 18162786 18162835 18162786 ID=MS.gene059842.t1.exon3;Parent=MS.gene059842.t1
chr2.4 CDS 18162786 18162835 18162786 ID=cds.MS.gene059842.t1;Parent=MS.gene059842.t1
chr2.4 exon 18162467 18162508 18162467 ID=MS.gene059842.t1.exon4;Parent=MS.gene059842.t1
chr2.4 CDS 18162467 18162508 18162467 ID=cds.MS.gene059842.t1;Parent=MS.gene059842.t1
chr2.4 exon 18162183 18162296 18162183 ID=MS.gene059842.t1.exon5;Parent=MS.gene059842.t1
chr2.4 CDS 18162183 18162296 18162183 ID=cds.MS.gene059842.t1;Parent=MS.gene059842.t1
chr2.4 exon 18161789 18161867 18161789 ID=MS.gene059842.t1.exon6;Parent=MS.gene059842.t1
chr2.4 CDS 18161789 18161867 18161789 ID=cds.MS.gene059842.t1;Parent=MS.gene059842.t1
chr2.4 exon 18161614 18161685 18161614 ID=MS.gene059842.t1.exon7;Parent=MS.gene059842.t1
chr2.4 CDS 18161614 18161685 18161614 ID=cds.MS.gene059842.t1;Parent=MS.gene059842.t1
chr2.4 exon 18161474 18161521 18161474 ID=MS.gene059842.t1.exon8;Parent=MS.gene059842.t1
chr2.4 CDS 18161474 18161521 18161474 ID=cds.MS.gene059842.t1;Parent=MS.gene059842.t1
Gene Sequence

>MS.gene059842

ATGTCGAGAAACGTTAACGGTAATGGTGCTCCGGCGAAAATCGCCACCAGCTCAGAGAAAGACGACGGCGAAGCTCCGTCGAAAAGAGATTCAAGGAAAACACGAGAATATTCCGATATAGACACACAATCCGATAGAAAGCATAGTAGCTCAAAGAAGAAATCGCGTGAGAGTTCAGATTCCGATTCCGATAAACGACGCCGTAGGAAGAGGAAATCACGTCGGAGATATAGCAGTGATGATGAATCGGATTCGGATTCCGGTTCGGATTCGGAGTCAGAGAGCGATGAATCCGAACGGTCTGGTTCGGAGTCGGAGTATTCGGGTTCGGAGAGTGAAGGAGAGAGGAAGGAGAGGAAGAGGAAGGAGAAGCGAAGGAGGAGAGAGAGGGAGGAAGAGAAGAGAAGGAGGAGAGAGAAAGAGAAGAAGAGAAGGAAGAAGGAGAAAGAAGAAGAGAGAAGGAAGAAAGAGAAACGAAAAATGAAGAAGAAGGAGAAAAAGGAAAGAGGGAAGAAAGGTGCTGTGACTAATTTATGGGGAAAGTATGGGATTATTAGAGAAACTGATATGTGGTAAGAATTTTTTGGTTTTGGTTTTTGAAATTTGAGTAATTTATATTTGCTTGTTGATTGAATTATTGAATTATGTGGTAGAATATAGTGTAGATTTTGAAATTCTAGGCTAATGTTTTGTTGATTTGTTTTTGTTTTGCATTTGAGTTATATGTACTGAAATATCATGGGATTGGACTGTGAAAGTTTTTAGTGGCGTTGTTAGTGTATAAGGTTGTAGATTTTGATCGAAAGATTTCAGATTGGAAAATTAACAGCATTCAAATTGATTATTGTTATGCTTTGTTCTGGAGTGGATTTAGTTTGATGGCTTGAGTGGCTGAGTATGGCATCCCCTCCACAGAGGTGGTGGTGAACTTGCAAACATTCTGCCGATAAGTCAGTGAATGGTCGAGAGTGTAAGGTTTTAGGGTTTAGAGAATGTGTACCTTAAACTGAATCACGAGTTAGCGATGATTTCTTCTAGGGTTTCTCATATGGAAGCCCGAATTGAACAGCTCTCTCTTAAGACAATTGACATGTCATGATGTGGTCATCATCTCACGGGCCTGATTGAGTCTCTGGACTCGCCTGGGTGTGCTTCTATGGCGTCTCCATGATATGTCATCATGGTCCGCATTGATCCGTTTTGTTGGTGGGCTGGACTTGGCCCAGTCCGGAACATGCTTTTAACAATTTGTATGTGAATCTTTTAAGATTGGAGAATTATAAGTAATAACTAGGGACAGGATTCAAAGTTGTTCTCTTGACATCCAAATAGGCAAAAAGTGAAATGAATGACTGACGACAACACTGAAACAAATTCCAGTTTCAGTATGCTGTAAAGAATCTCTATTTTGGAGAAGCTATACCATTTTAACAACACTTTGCAACTTTACACTCTCTCCCGAATATAGCTTCCAGTGTAATCTCTTGGAAGATGAAGGTGGTTGTTGGCAGAAGTAAGATAACTTATTTAATCTAGGGTAAATAGCAGCAGAAATTAATATGTGGATTGTAGTTGAAAGATTGAAAACATAGAATATGCATCGGCTGTTGATGGTTTATTGTAGTCGTTATCTCAGGTACACTTTAACAAGATGTTTCATCTAAGTTTGTACTTTCTGTTTAGAAGCTAGAGGCTTGAAGTAACTGAAAATGCTCATTAGATTGCTAGCATGCGATTGGATATTGAAGGTACAACCTAATGCTGTATAAGGGTTTAGGAAGTGTTGGTTTGCTGCATATCTATTGCAGAAGTAGAATTTGTTATTGCATATGTCTCTCTCCTAAATATAATTTCCAGTCTAATCTCTTGGAAGCTGACAGTAGTTGCTGGTAGAAGCAAAATAACTTGTTTAATGTATTGTAGGGTAAATAGCAGCAGAAATTCATATCTAGGTTGTAGTTGATAGAGTTAAAACATAGGAATATGCACCGGCTGTTAATGGTTTATTGCAGTCATTATCTTGTAATGGGCAAAATTTACATCTAGGTGTGTACTTTAGTGTTAAGAACTAAGGACCTAAGTCCTAAAGTACCTAAAATTCCTCCAGATTGTTAGCATGTGATTGGATATTGAAGGGACATCCTAATACTGTAGAGTGGTCTAGGAAGGGGCGGATGAATGCAAATCTATTGTAGATATTTTATTGTATAAGGTTGTAGAATTTGATTGAAATATGTTAAATTAGAACATTAACAGCATTCAGATTGAGAGTTTTTGTACTTTTAGCAATTTGCATGTGAATCATGTAAGATTGCATTGGAGAAGAATAATAATAACTAGTAACAGGATTCAAAGTTGTTCACATGACACCAAAACAGGACAAAAAGTGAAATGACTGACAACACCACTTTAACAAATTCCACTTTCAGCATGCTGTAAAGAATCGTTGTTTTGGAGAAGCTATACCATATTAACAACAATTTGCAATTTCTCTCCTGAATATAGGTTCCAGTCTAATAATGTCTTCGAAGATGAAGGTAGTTGTTGACACAAGCAAGATAACTTATTTAATGTAGGGTAAATAGCTTCAGAAATTCATGTGGATTGTAGTTGATAGAGTTTAAACATAGGAATATGCACCAACTGTTGATGGTTTGTTGCAGTCGTTATCCCGTGACTTACGCTTTGGCAAAATTTTATATCGAGTTGTGTACTTTTCCTTTTTAGAAGTTAAAGACCTAAAGCAACTGAAAACACTTCAGTTTGTTAGTATGTGACTGGATATTGGAGGGACAACCTAATGTTATAGCGGGTCTAGGGAAGAGGGTAGGATCCACTGCAGACCTATTGCTGGCTACCTTAGTTTGCATTTGCAAGAGGATGTTTCCAAGACTACAGTCACATGGAAGCAACTCCAAGCCTCCAACTGTTGCGTCAAGACTTCCATTTTAACATATTGACTTGATATTATGGTTTAATTTTTTTATGGAAGCTTCGATTTATTTTATTAAGATTTCAACTCTCAAATCATCAGAGCTTATCTGTTGTTTTCAGAAGATCTTTAATCTTTGAGTACCTACGTTCTAAAGGTCGTGCTGAAGTAAATCATCAGCCTGCATTTTTGGCTGAGTTTGCATTTATTGTCTAGCTAATTTAAATTTAGCATTAATATCCTGTGAACTATGGATTTTGGTATACCTTGTTTGAGTGATGTTATGAATATTGCAGGACCAAGCGTCCAGAGTTCACCGCATGGTTGGCAGAAGTTAAGCTGGTAATTATTTTGGTTTGCTTTTATATTAAAATCTAACATTAACACTATTATATTTCCTCTTCCTTTTTCTGTGTGGTCCTCTGTTCATTTTTGCAAAAACTCAAACTAGTGGCTTCTTTACATCATCCTGCGACTGGGAGATGTTTTCCTTGTTTTCTTTACACAGATTATTAATCTTATTTCCAGTATATGTCGGTGACACTGAGAAATCAAAGTTTTATTACTGATTAGATTGCATATTTTGACATTGAGAAATCAAACTTTTATTACTGATTAGATTGCATATTTTTCTTGCCTATTGGACTGCATTTCTTTTCTTCTCAATAGAAGTGCATAATATCTTTCACCCTTTATATTTTGGCATTCTAGTTTATTTGCATGTCATGTTTACATGGACCATATCCAATTTTAATTTGCTGTATTTTAACAGGTAAATATGGAGCATCTGTCTAATTGGGAAGAAAAACAGATGTTCAAAGAGTAAGCACCTAATCTTGCAACTCAAGGAAAAAAATTAATAAAAAGAGAGAAGGATGGAAAGGAACAGAAAAAGTGGCACATAGGTTTAGCTGTTTGATAACTACTCTTATGTTTATATTTACTCTTAAGGTGCCACAAGAGAAAAGGATGCTCATTTTAGTTCTTTCATTCTCACCTTAACTAACCTATTGACTTGCTGATAATCACTACGTCACACATTACATTTATTACTACGCTGTTGATTCAAAGTTAATTTCTCTCTAATTTCTGGTTGCAGATTTATGGAGGATCACAACACAGCTACGTTCCCTTCCAAAAAGTAAGCTCTAGCAGAAGTTTAATTTGGCTTATTTTTTGTCCTCATTTTTATGAATAGGATACGGCCGTGTACATCCTTGTTCTGTGACGATGAGATGAATTTAAGATCTTGATTGAATCATTATTGTATATTCATTTGGGTTGACAAATGGTTTAATGTTTATGTGGCAGGTATTACAGTCTTGATGCTTACTACAGGCGTCAAATGGAAAAAGAGATGAAAAAGGGTTATAAGAAGGTTCAGCCTAAGGAACGAACAGTTTTCAATGATGAAGAACAGCGCAGGTATGATTTTGATCACGCTGCTTAACTAATGTAATCTTAACTTGGTTTTCTTTTGGCAATCGTTCTTTCCCAAACTTACTCTACCCCTATTGTTAGCTACCTACATGCTTTACTATTGTTTATATTTATGATGTGCTAGATTTTTTTAATGACTTGTTCCTTTTCACTCTGTCAACTCTTCTACCATTGTAGAAGTCTACCTATATTATATTTTCTTTTACTGCACTTCAAGTGGAACTATGTTACACATAACAAATATTGTTTCTGTTGACACATGTTTCACACTTTCATGATCATTTTTCAATGGACCTGCAGACAAGAAATGTTGCAAGTACGTGAAAAACAGAAGGAAGAGCAAGTGATAGCTTTGAAGCGTGAAATGGAAAGTGGAATGGTTAGTTTTTACCAGATCACTTTTATGCAATTTGAATTTCAATCATTTTGTTAATTAATGACAAAAGGTTCTGTTCTCACATTTTTGTGCAATAATTTTGCAGGCACAAGCAATGAAAGAGCAAGCTCAACTCAGGGAGGAGATGGCTTACCAGTACAAGCTCGGCAACTTTGAGGTGAGAATTACAAATTCAACTCCATTTGGACCTTCTTTTTTAGCTTAAGTCTCAACTAAATTTGCTGCAATTTTTTTTTTTTATCACTATAGGCTGCTGCTGCAATTCAGAGAAGGTTGGACCCTGATGCTGCCGTGTAG

Protein sequence

>MS.gene059842.t1

MSRNVNGNGAPAKIATSSEKDDGEAPSKRDSRKTREYSDIDTQSDRKHSSSKKKSRESSDSDSDKRRRRKRKSRRRYSSDDESDSDSGSDSESESDESERSGSESEYSGSESEGERKERKRKEKRRRREREEEKRRRREKEKKRRKKEKEEERRKKEKRKMKKKEKKERGKKGAVTNLWGKYGIIRETDMWTKRPEFTAWLAEVKLVNMEHLSNWEEKQMFKEFMEDHNTATFPSKKYYSLDAYYRRQMEKEMKKGYKKVQPKERTVFNDEEQRRQEMLQVREKQKEEQVIALKREMESGMAQAMKEQAQLREEMAYQYKLGNFEAAAAIQRRLDPDAAV