AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene05364


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene05364.t1 MTR_6g082620 92.308 364 15 3 1 355 1 360 0.0 628
MS.gene05364.t1 MTR_8g106240 58.939 358 119 11 7 354 14 353 3.43e-133 384
MS.gene05364.t1 MTR_8g106240 54.135 266 94 11 7 262 14 261 1.35e-74 232
MS.gene05364.t1 MTR_8g106240 51.502 233 87 10 7 231 14 228 1.18e-56 184
MS.gene05364.t1 MTR_3g108808 49.107 112 51 2 247 352 422 533 4.18e-29 118
MS.gene05364.t1 MTR_1g019200 50.000 102 50 1 247 348 602 702 4.19e-29 119
MS.gene05364.t1 MTR_1g066430 47.009 117 56 4 238 352 585 697 1.62e-28 117
MS.gene05364.t1 MTR_7g100950 44.275 131 68 3 224 352 422 549 1.17e-27 114
MS.gene05364.t1 MTR_2g078440 49.057 106 50 3 247 352 197 298 2.17e-27 110
MS.gene05364.t1 MTR_2g078450 41.525 118 62 1 243 353 400 517 3.69e-27 112
MS.gene05364.t1 MTR_1g009680 46.789 109 52 2 247 349 362 470 5.68e-27 111
MS.gene05364.t1 MTR_7g100950 45.528 123 62 3 232 352 428 547 8.17e-27 111
MS.gene05364.t1 MTR_4g085630 48.598 107 54 1 247 353 451 556 8.56e-26 108
MS.gene05364.t1 MTR_1g066400 45.872 109 54 3 246 353 426 530 8.10e-25 105
MS.gene05364.t1 MTR_2g076290 41.228 114 58 3 247 352 217 329 1.97e-22 96.7
MS.gene05364.t1 MTR_3g088100 44.211 95 50 2 257 351 111 202 8.06e-19 84.3
MS.gene05364.t1 MTR_3g025940 39.583 96 57 1 254 349 348 442 7.36e-18 84.7
MS.gene05364.t1 MTR_8g037150 37.755 98 60 1 254 351 144 240 1.17e-16 79.0
MS.gene05364.t1 MTR_5g016960 40.404 99 57 2 255 352 499 596 2.44e-16 80.5
MS.gene05364.t1 MTR_2g076240 38.053 113 42 4 247 352 89 180 7.97e-16 75.1
MS.gene05364.t1 MTR_1g114240 39.130 115 55 3 242 351 228 332 1.50e-15 77.0
MS.gene05364.t1 MTR_1g114240 39.130 115 55 3 242 351 222 326 1.57e-15 77.0
MS.gene05364.t1 MTR_4g065670 34.711 121 76 2 235 353 123 242 4.33e-15 74.3
MS.gene05364.t1 MTR_5g016980 43.373 83 43 3 274 354 254 334 7.62e-15 75.1
MS.gene05364.t1 MTR_4g065670 37.000 100 62 1 254 353 151 249 1.19e-14 73.2
MS.gene05364.t1 MTR_5g016920 42.857 77 41 2 277 352 71 145 2.14e-14 70.5
MS.gene05364.t1 MTR_5g016940 43.836 73 35 1 277 349 275 341 7.57e-14 72.0
MS.gene05364.t1 MTR_5g079050 39.744 78 46 1 275 352 282 358 1.58e-13 71.2
MS.gene05364.t1 MTR_8g036640 36.364 88 55 1 254 341 142 228 1.61e-13 70.5
MS.gene05364.t1 MTR_5g078900 40.000 75 44 1 275 349 282 355 5.78e-13 69.7
MS.gene05364.t1 MTR_4g017500 32.990 97 42 2 254 350 3 76 9.77e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene05364.t1 AT1G73760 41.799 378 155 14 4 348 15 360 3.08e-75 237
MS.gene05364.t1 AT1G17970 37.958 382 188 12 4 355 6 368 6.82e-60 197
MS.gene05364.t1 AT1G73760 38.014 292 119 13 4 262 15 277 2.37e-37 136
MS.gene05364.t1 AT4G31450 42.690 171 68 5 208 348 319 489 2.83e-34 132
MS.gene05364.t1 AT4G31450 42.690 171 68 5 208 348 319 489 2.83e-34 132
MS.gene05364.t1 AT2G15530 51.786 112 52 1 246 355 593 704 4.68e-31 124
MS.gene05364.t1 AT2G15530 51.786 112 52 1 246 355 593 704 4.68e-31 124
MS.gene05364.t1 AT2G15530 51.786 112 52 1 246 355 593 704 4.68e-31 124
MS.gene05364.t1 AT2G15530 51.786 112 52 1 246 355 593 704 4.68e-31 124
MS.gene05364.t1 AT2G15530 51.786 112 52 1 246 355 593 704 4.68e-31 124
MS.gene05364.t1 AT2G15530 51.786 112 52 1 246 355 571 682 5.24e-31 124
MS.gene05364.t1 AT4G34040 53.922 102 46 1 247 348 560 660 1.06e-30 123
MS.gene05364.t1 AT5G10650 46.226 106 53 1 247 348 411 516 1.26e-29 119
MS.gene05364.t1 AT5G10650 46.226 106 53 1 247 348 411 516 1.26e-29 119
MS.gene05364.t1 AT5G24870 47.368 114 54 2 247 355 404 516 9.58e-29 117
MS.gene05364.t1 AT5G24870 47.368 114 54 2 247 355 404 516 9.58e-29 117
MS.gene05364.t1 AT5G24870 47.368 114 54 2 247 355 404 516 9.58e-29 117
MS.gene05364.t1 AT5G42940 43.802 121 65 2 229 348 560 678 2.59e-28 116
MS.gene05364.t1 AT5G42940 43.802 121 65 2 229 348 560 678 2.59e-28 116
MS.gene05364.t1 AT2G15530 51.923 104 48 1 247 348 594 697 1.28e-27 114
MS.gene05364.t1 AT1G53190 38.346 133 72 2 231 353 356 488 3.02e-27 112
MS.gene05364.t1 AT1G53190 38.346 133 72 2 231 353 356 488 3.02e-27 112
MS.gene05364.t1 AT1G45180 47.107 121 61 2 229 348 467 585 1.48e-26 111
MS.gene05364.t1 AT3G15070 42.727 110 60 1 247 353 365 474 1.98e-26 110
MS.gene05364.t1 AT3G15070 42.727 110 60 1 247 353 365 474 1.98e-26 110
MS.gene05364.t1 AT1G45180 47.107 121 61 2 229 348 515 633 2.04e-26 110
MS.gene05364.t1 AT1G45180 47.107 121 61 2 229 348 515 633 2.04e-26 110
MS.gene05364.t1 AT1G45180 47.107 121 61 2 229 348 515 633 2.04e-26 110
MS.gene05364.t1 AT2G37150 44.167 120 59 3 234 352 426 538 1.20e-20 93.6
MS.gene05364.t1 AT2G37150 44.167 120 59 3 234 352 426 538 1.20e-20 93.6
MS.gene05364.t1 AT2G37150 44.167 120 59 3 234 352 426 538 1.20e-20 93.6
MS.gene05364.t1 AT2G37150 44.167 120 59 3 234 352 426 538 1.20e-20 93.6
MS.gene05364.t1 AT2G37150 44.167 120 59 3 234 352 426 538 1.20e-20 93.6
MS.gene05364.t1 AT2G37150 44.167 120 59 3 234 352 426 538 1.20e-20 93.6
MS.gene05364.t1 AT2G37150 44.167 120 59 3 234 352 426 538 1.20e-20 93.6
MS.gene05364.t1 AT2G37150 44.167 120 59 3 234 352 426 538 1.20e-20 93.6
MS.gene05364.t1 AT2G37150 44.167 120 59 3 234 352 426 538 1.20e-20 93.6
MS.gene05364.t1 AT2G37150 44.167 120 59 3 234 352 426 538 1.20e-20 93.6
MS.gene05364.t1 AT2G37150 44.167 120 59 3 234 352 426 538 1.20e-20 93.6
MS.gene05364.t1 AT2G37150 44.167 120 59 3 234 352 442 554 1.30e-20 93.6
MS.gene05364.t1 AT2G37150 44.167 120 59 3 234 352 442 554 1.30e-20 93.6
MS.gene05364.t1 AT2G37150 44.167 120 59 3 234 352 442 554 1.30e-20 93.6
MS.gene05364.t1 AT2G37150 44.167 120 59 3 234 352 479 591 2.36e-20 92.8
MS.gene05364.t1 AT3G63530 36.275 102 64 1 254 355 145 245 2.40e-16 78.2
MS.gene05364.t1 AT3G63530 36.275 102 64 1 254 355 145 245 2.40e-16 78.2
MS.gene05364.t1 AT5G67120 37.500 96 56 1 257 352 181 272 5.35e-16 77.4
MS.gene05364.t1 AT3G19910 37.374 99 59 1 253 351 237 332 6.05e-16 78.2
MS.gene05364.t1 AT1G36950 34.286 105 61 2 247 349 24 122 1.27e-14 72.8
MS.gene05364.t1 AT4G00070 35.052 97 55 2 247 341 88 178 3.13e-14 70.5
MS.gene05364.t1 AT3G47180 37.755 98 57 3 257 353 115 209 1.50e-13 69.3
MS.gene05364.t1 AT1G17970 32.099 243 123 9 4 219 6 233 4.46e-12 66.2
MS.gene05364.t1 AT5G52140 33.333 111 53 2 255 351 175 278 1.37e-11 64.7

Find 65 sgRNAs with CRISPR-Local

Find 283 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGAAGTGGATTGGATTAA+AGG 0.127262 6.3:+75752849 None:intergenic
GGGGTGCCTTGATTTGTTTC+TGG 0.157620 6.3:+75752905 None:intergenic
ATGACAAACTTTCTTGATTT+AGG 0.185666 6.3:+75750221 None:intergenic
TTGAAGATAATGAAATTTAA+AGG 0.218139 6.3:-75749156 MS.gene05364:intron
CGTCGTGGATTAGAGTCTTT+TGG 0.281440 6.3:-75750166 MS.gene05364:CDS
GGGTGCCTTGATTTGTTTCT+GGG 0.293271 6.3:+75752906 None:intergenic
GGAAAAGAGAGTGGAGATAC+TGG 0.302656 6.3:+75752821 None:intergenic
TGGCAGCGTTCATCTTATTT+TGG 0.312818 6.3:-75750259 MS.gene05364:intron
TCAAGAGGAAAACTTGATAA+TGG 0.337233 6.3:-75752459 MS.gene05364:CDS
TTTAAAGGAGCTAGACTAAT+GGG 0.372266 6.3:-75749141 MS.gene05364:CDS
GTATGAATCAGATGATGAAT+TGG 0.374695 6.3:-75748315 MS.gene05364:CDS
TTCATGTGTCCTGTGATAAC+AGG 0.376347 6.3:+75752939 None:intergenic
AGAATTGGTTATGTGAAAAC+TGG 0.378566 6.3:-75748559 MS.gene05364:CDS
GTTTGGTGTGGACCTGGAAC+TGG 0.389369 6.3:-75752546 MS.gene05364:CDS
CAGGATGTTTGGTGTGGACC+TGG 0.408347 6.3:-75752552 MS.gene05364:CDS
AGTTTGATCAGTTTCTGAAA+TGG 0.416654 6.3:+75752884 None:intergenic
ACTATCATGTGTGGTTTCAT+TGG 0.416786 6.3:+75752779 None:intergenic
CTTGAGCTGGGAGAGAGAAT+TGG 0.417630 6.3:-75748574 MS.gene05364:CDS
GTTTGATCAGTTTCTGAAAT+GGG 0.427276 6.3:+75752885 None:intergenic
GGATGTGTTGTTTGAGAAAG+TGG 0.430164 6.3:+75752800 None:intergenic
TTGCAAACTCACTTGACAAA+TGG 0.433202 6.3:+75748444 None:intergenic
TCAGATAAGAATCCAGTTCC+AGG 0.441033 6.3:+75752534 None:intergenic
TGGATTTGCAAGAAGTGGAT+TGG 0.441489 6.3:+75752841 None:intergenic
GCTTCGAATGTTTCTTCTGA+TGG 0.448426 6.3:-75750121 MS.gene05364:CDS
ATTTAAAGGAGCTAGACTAA+TGG 0.453341 6.3:-75749142 MS.gene05364:CDS
TATGAATCAGATGATGAATT+GGG 0.460080 6.3:-75748314 MS.gene05364:CDS
GTAACAGCAATTGCTTGAGC+TGG 0.470112 6.3:-75748587 MS.gene05364:intron
ATTGGCAAGGGAAGAAGAAC+AGG 0.472226 6.3:-75752629 MS.gene05364:CDS
CACCGCCGGTACATCACAAC+AGG 0.474074 6.3:-75752685 MS.gene05364:CDS
AGAAAGAATGTTTCTTCAAG+AGG 0.474714 6.3:-75752474 MS.gene05364:CDS
CGACTTCTTGCTTACAGACT+GGG 0.478209 6.3:+75748222 None:intergenic
TTATCACAGGACACATGAAA+TGG 0.480387 6.3:-75752935 MS.gene05364:CDS
GATACTGGATTTGCAAGAAG+TGG 0.481405 6.3:+75752836 None:intergenic
ACGACTTCTTGCTTACAGAC+TGG 0.490694 6.3:+75748221 None:intergenic
CACGTGATCAATTTAGAGAC+TGG 0.496333 6.3:-75749110 MS.gene05364:CDS
AGAGGACTCGGTTGCACCGC+CGG 0.517678 6.3:-75752699 MS.gene05364:CDS
CTTCCCTTGCCAATCTGCAG+AGG 0.521246 6.3:+75752638 None:intergenic
TGAGAAAGTGGAAAAGAGAG+TGG 0.536359 6.3:+75752812 None:intergenic
TGCTGCTGCTGATGTTTCTG+TGG 0.541957 6.3:-75752511 MS.gene05364:CDS
TGATTCGATCCTCTGCAGAT+TGG 0.544628 6.3:-75752647 MS.gene05364:CDS
ATCACAACAGGTGTCTGTAC+CGG 0.545837 6.3:-75752673 MS.gene05364:CDS
TTCTTCTGATGGTATTGCTG+AGG 0.549937 6.3:-75750110 MS.gene05364:intron
AGACACCTGTTGTGATGTAC+CGG 0.549972 6.3:+75752680 None:intergenic
CGATCCTCTGCAGATTGGCA+AGG 0.563656 6.3:-75752642 MS.gene05364:CDS
TTTACTGCATCAACCTTCAG+AGG 0.568041 6.3:-75752717 MS.gene05364:CDS
GAAAACTTGATAATGGTGAA+AGG 0.574739 6.3:-75752452 MS.gene05364:CDS
TAACAGCAATTGCTTGAGCT+GGG 0.576297 6.3:-75748586 MS.gene05364:intron
GGTGCAACCGAGTCCTCTGA+AGG 0.578158 6.3:+75752704 None:intergenic
TAAACCATGCCTGTTATCAC+AGG 0.578283 6.3:-75752948 None:intergenic
GAAGTCCCAGAAACAAATCA+AGG 0.581530 6.3:-75752911 MS.gene05364:CDS
AGAAGGAACAAAACATGTCA+TGG 0.588257 6.3:-75752594 MS.gene05364:CDS
GATCCTCTGCAGATTGGCAA+GGG 0.591294 6.3:-75752641 MS.gene05364:CDS
ATGTCATGGTGTTGATGATG+TGG 0.591462 6.3:-75752580 MS.gene05364:CDS
TTTGATCAGTTTCTGAAATG+GGG 0.598291 6.3:+75752886 None:intergenic
TAAAGGAGCTAGACTAATGG+GGG 0.604237 6.3:-75749139 MS.gene05364:CDS
ACTTTCAGTGTATAAAACAA+TGG 0.605990 6.3:-75748265 MS.gene05364:CDS
GCATCAACCTTCAGAGGACT+CGG 0.610375 6.3:-75752711 MS.gene05364:CDS
TTAAAGGAGCTAGACTAATG+GGG 0.619391 6.3:-75749140 MS.gene05364:CDS
GCAGAGGATCGAATCACTGC+CGG 0.636222 6.3:+75752654 None:intergenic
TGAAAGGATAACACATAGAG+AGG 0.638029 6.3:-75752436 MS.gene05364:intron
GTGTCCTGTGATAACAGGCA+TGG 0.666826 6.3:+75752944 None:intergenic
AGTCTGTAAGCAAGAAGTCG+TGG 0.680527 6.3:-75748219 MS.gene05364:CDS
CACCTGTTGTGATGTACCGG+CGG 0.715490 6.3:+75752683 None:intergenic
AAAGGAGCTAGACTAATGGG+GGG 0.733126 6.3:-75749138 MS.gene05364:CDS
TGTTGATAATATGTCATACG+AGG 0.781009 6.3:-75749079 MS.gene05364:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAATATGAAACTTTAATT+TGG + chr6.3:75752735-75752754 None:intergenic 10.0%
!!! ATTTTTTTTCTTTCTATTTT+TGG - chr6.3:75751802-75751821 MS.gene05364:intron 10.0%
!!! TTATAAAATTTTATATGTGT+TGG - chr6.3:75750871-75750890 MS.gene05364:intron 10.0%
!! AAACTAATAATCAAAATCAA+AGG + chr6.3:75749615-75749634 None:intergenic 15.0%
!! AAATAAAAAACTTAACATCT+AGG + chr6.3:75751181-75751200 None:intergenic 15.0%
!! ATCAATTAATCAAATAATCA+TGG + chr6.3:75749508-75749527 None:intergenic 15.0%
!! TTGAAGATAATGAAATTTAA+AGG - chr6.3:75751994-75752013 MS.gene05364:intron 15.0%
!!! AAAATACGAAATTTGAAATA+TGG - chr6.3:75751209-75751228 MS.gene05364:intron 15.0%
!!! ATTGATTTTTATGCATTATA+TGG - chr6.3:75749522-75749541 MS.gene05364:intron 15.0%
!!! ATTTTGATTATTAGTTTTGT+AGG - chr6.3:75749618-75749637 MS.gene05364:intron 15.0%
!!! TTTGCATACTTATTTTATTT+TGG - chr6.3:75751749-75751768 MS.gene05364:intron 15.0%
!! AAAAATGTCATTATTGCAAA+GGG + chr6.3:75749982-75750001 None:intergenic 20.0%
!! ACTAAAGACATTCTAATATT+TGG + chr6.3:75751725-75751744 None:intergenic 20.0%
!! TAAAAATGTCATTATTGCAA+AGG + chr6.3:75749983-75750002 None:intergenic 20.0%
!! TAATATTGCCATAATTATCA+AGG - chr6.3:75752131-75752150 MS.gene05364:intron 20.0%
!! TAATATTGTAATCTTCACTA+TGG - chr6.3:75750361-75750380 MS.gene05364:intron 20.0%
!! TGAGTTATTCATATCATTAT+AGG - chr6.3:75751409-75751428 MS.gene05364:intron 20.0%
!!! AAATTTTGGAAACAATCTAT+TGG - chr6.3:75752209-75752228 MS.gene05364:intron 20.0%
!!! AATTTTATCTTTAGTGCTTT+AGG - chr6.3:75751500-75751519 MS.gene05364:intron 20.0%
!!! AGTTCTGGTTTATTATAAAA+TGG - chr6.3:75751864-75751883 MS.gene05364:intron 20.0%
!!! ATACGGTTAACATTATTTTT+TGG - chr6.3:75749562-75749581 MS.gene05364:intron 20.0%
!!! ATTATAGGTTATTTGTTGTT+TGG - chr6.3:75751424-75751443 MS.gene05364:intron 20.0%
!!! CATAAACTTTTTCTGATTTT+AGG + chr6.3:75751597-75751616 None:intergenic 20.0%
!!! GTCTTTTATTAATTCCATTT+TGG - chr6.3:75749668-75749687 MS.gene05364:intron 20.0%
!!! TAAAAAATAGAGAGCATTAA+TGG + chr6.3:75752109-75752128 None:intergenic 20.0%
!!! TCTTTTCATTTCTTTGAATT+CGG - chr6.3:75751082-75751101 MS.gene05364:intron 20.0%
!!! TTATTTTAATTTGAGTGCTA+TGG - chr6.3:75751619-75751638 MS.gene05364:intron 20.0%
!!! TTCTTTCTATTTTTGGATTA+TGG - chr6.3:75751809-75751828 MS.gene05364:intron 20.0%
!!! TTTTCTTGATTGATTTATTG+TGG - chr6.3:75750649-75750668 MS.gene05364:intron 20.0%
! AACAATCTATTGGATTTCTA+AGG - chr6.3:75752219-75752238 MS.gene05364:intron 25.0%
! AAGCTATATTCAAAAGCTTA+GGG - chr6.3:75750054-75750073 MS.gene05364:intron 25.0%
! AATTCAATGAGAAACAACAA+AGG + chr6.3:75749151-75749170 None:intergenic 25.0%
! ACATGATCTAAATAGATAGA+TGG + chr6.3:75752378-75752397 None:intergenic 25.0%
! ACTTTCAGTGTATAAAACAA+TGG - chr6.3:75752885-75752904 MS.gene05364:CDS 25.0%
! ATCTATCACTCATAACAAAA+AGG - chr6.3:75750417-75750436 MS.gene05364:intron 25.0%
! ATCTATCTATTTAGATCATG+TGG - chr6.3:75752377-75752396 MS.gene05364:intron 25.0%
! ATGACAAACTTTCTTGATTT+AGG + chr6.3:75750932-75750951 None:intergenic 25.0%
! ATGACATACATGTTAATGAT+TGG - chr6.3:75750774-75750793 MS.gene05364:intron 25.0%
! ATGAGATGAAAAACAACATA+AGG - chr6.3:75752625-75752644 MS.gene05364:CDS 25.0%
! ATGTAACATGTAACGAAATT+CGG + chr6.3:75750482-75750501 None:intergenic 25.0%
! CACAAATTTCTATGAACATA+TGG + chr6.3:75752536-75752555 None:intergenic 25.0%
! CACTATGGTATATAAATACA+AGG - chr6.3:75750376-75750395 MS.gene05364:intron 25.0%
! CATATGTTCATAGAAATTTG+TGG - chr6.3:75752534-75752553 MS.gene05364:CDS 25.0%
! GAATTCAAAGAAATGAAAAG+AGG + chr6.3:75751083-75751102 None:intergenic 25.0%
! TAAAAGACCATAATCTATCA+AGG + chr6.3:75749656-75749675 None:intergenic 25.0%
! TAAATTTACATCGTACAAGT+CGG - chr6.3:75750335-75750354 MS.gene05364:intron 25.0%
! TAAGCTATATTCAAAAGCTT+AGG - chr6.3:75750053-75750072 MS.gene05364:intron 25.0%
! TATGAATCAGATGATGAATT+GGG - chr6.3:75752836-75752855 MS.gene05364:CDS 25.0%
! TTGTTATGAGTGATAGATTA+GGG + chr6.3:75750415-75750434 None:intergenic 25.0%
! TTTGTTCAATTTAAGCTAGT+AGG - chr6.3:75749939-75749958 MS.gene05364:intron 25.0%
!! AAGCTTTTGAATATAGCTTA+TGG + chr6.3:75750053-75750072 None:intergenic 25.0%
!! ATCCTTGACATTTTTATATC+GGG + chr6.3:75750207-75750226 None:intergenic 25.0%
!! GATCCTTGACATTTTTATAT+CGG + chr6.3:75750208-75750227 None:intergenic 25.0%
!! TTTGTTATGAGTGATAGATT+AGG + chr6.3:75750416-75750435 None:intergenic 25.0%
!!! ATCACTAGACTTATTTTCAA+GGG + chr6.3:75750677-75750696 None:intergenic 25.0%
!!! CGTTGATTCATTATAATAGA+GGG - chr6.3:75750170-75750189 MS.gene05364:CDS 25.0%
!!! GTTATTTGTTGTTTGGAATT+TGG - chr6.3:75751431-75751450 MS.gene05364:intron 25.0%
!!! TACGTATGACTTTTAGAAAT+TGG + chr6.3:75750623-75750642 None:intergenic 25.0%
!!! TCAAGAAAGTTTGTCATTTT+TGG - chr6.3:75750935-75750954 MS.gene05364:intron 25.0%
!!! TCGTTGATTCATTATAATAG+AGG - chr6.3:75750169-75750188 MS.gene05364:CDS 25.0%
!!! TGTTCTTTTTTGTTCTGTTT+TGG + chr6.3:75748399-75748418 None:intergenic 25.0%
!!! TTTTTTTGGACTTTTTTGTC+TGG - chr6.3:75749275-75749294 MS.gene05364:intron 25.0%
AAAAAATGCATTCACACACA+CGG - chr6.3:75749706-75749725 MS.gene05364:intron 30.0%
AAAATTATGAGGGACCAAAA+TGG - chr6.3:75750272-75750291 MS.gene05364:intron 30.0%
AAAGTCTAATGTTGATGTGA+TGG - chr6.3:75749869-75749888 MS.gene05364:intron 30.0%
AAATTTACATCGTACAAGTC+GGG - chr6.3:75750336-75750355 MS.gene05364:intron 30.0%
ACTAACAAGCCTTAGTTAAT+CGG + chr6.3:75751841-75751860 None:intergenic 30.0%
ACTATATATTGCAAGGAATC+CGG + chr6.3:75752268-75752287 None:intergenic 30.0%
ACTTCTAGCAGATTAGTATA+TGG - chr6.3:75751689-75751708 MS.gene05364:intron 30.0%
AGAAAGAATGTTTCTTCAAG+AGG - chr6.3:75748676-75748695 MS.gene05364:intron 30.0%
AGAATACAAGGTAACAACTT+TGG + chr6.3:75752174-75752193 None:intergenic 30.0%
AGAATTGGTTATGTGAAAAC+TGG - chr6.3:75752591-75752610 MS.gene05364:CDS 30.0%
ATTTAAAGGAGCTAGACTAA+TGG - chr6.3:75752008-75752027 MS.gene05364:intron 30.0%
CATCGAATATTTCACAAACA+TGG - chr6.3:75749094-75749113 MS.gene05364:CDS 30.0%
CTTATGCTGGAATTGTAATA+CGG - chr6.3:75749545-75749564 MS.gene05364:intron 30.0%
GAATATTTCACAAACATGGA+TGG - chr6.3:75749098-75749117 MS.gene05364:CDS 30.0%
GGTAACAAAACATATGTCTT+CGG - chr6.3:75752240-75752259 MS.gene05364:intron 30.0%
GTATGAATCAGATGATGAAT+TGG - chr6.3:75752835-75752854 MS.gene05364:CDS 30.0%
GTTTGTGAAATATTCGATGT+GGG + chr6.3:75749093-75749112 None:intergenic 30.0%
TCAAGAGGAAAACTTGATAA+TGG - chr6.3:75748691-75748710 MS.gene05364:intron 30.0%
TCATGTCTTAGTGTCATATT+CGG + chr6.3:75749735-75749754 None:intergenic 30.0%
TGTATCTTTCTTGTGTGTTT+AGG - chr6.3:75752808-75752827 MS.gene05364:CDS 30.0%
TGTTTGTGAAATATTCGATG+TGG + chr6.3:75749094-75749113 None:intergenic 30.0%
TTCCCGATATAAAAATGTCA+AGG - chr6.3:75750202-75750221 MS.gene05364:CDS 30.0%
TTCGCAACTTTGAATGAATT+CGG - chr6.3:75748843-75748862 MS.gene05364:intron 30.0%
TTCTCTTTAACAAGCCAAAA+TGG + chr6.3:75749685-75749704 None:intergenic 30.0%
TTTAAAGGAGCTAGACTAAT+GGG - chr6.3:75752009-75752028 MS.gene05364:intron 30.0%
! AGTTTGATCAGTTTCTGAAA+TGG + chr6.3:75748269-75748288 None:intergenic 30.0%
! CATTGTTGTTGTTGACAAAA+TGG - chr6.3:75751361-75751380 MS.gene05364:intron 30.0%
! GAGATGACATTTTCATACTA+GGG - chr6.3:75750137-75750156 MS.gene05364:CDS 30.0%
! TGAGATGACATTTTCATACT+AGG - chr6.3:75750136-75750155 MS.gene05364:CDS 30.0%
! TTTATCTTTAGTGCTTTAGG+AGG - chr6.3:75751503-75751522 MS.gene05364:intron 30.0%
!! GAAAACTTGATAATGGTGAA+AGG - chr6.3:75748698-75748717 MS.gene05364:intron 30.0%
!! GATCACTAGACTTATTTTCA+AGG + chr6.3:75750678-75750697 None:intergenic 30.0%
!! GTTTGATCAGTTTCTGAAAT+GGG + chr6.3:75748268-75748287 None:intergenic 30.0%
!! TCACTAGACTTATTTTCAAG+GGG + chr6.3:75750676-75750695 None:intergenic 30.0%
!! TGTTGATAATATGTCATACG+AGG - chr6.3:75752071-75752090 MS.gene05364:intron 30.0%
!! TTAGAGTCTTTTGGAAATAG+TGG - chr6.3:75750993-75751012 MS.gene05364:intron 30.0%
!! TTTGATCAGTTTCTGAAATG+GGG + chr6.3:75748267-75748286 None:intergenic 30.0%
!! TTTTTGTTTCGTGGTTGTTT+TGG - chr6.3:75750826-75750845 MS.gene05364:intron 30.0%
!!! AGTAGGACCCATTTTTTTTT+GGG - chr6.3:75749956-75749975 MS.gene05364:intron 30.0%
!!! CTGTTCTAGCTGATTTTTTT+TGG - chr6.3:75751664-75751683 MS.gene05364:intron 30.0%
!!! TAGTAGGACCCATTTTTTTT+TGG - chr6.3:75749955-75749974 MS.gene05364:intron 30.0%
AACTTAACATCTAGGCCATA+TGG + chr6.3:75751173-75751192 None:intergenic 35.0%
AATTGCTTCTCAAGAGTCAT+TGG - chr6.3:75749236-75749255 MS.gene05364:intron 35.0%
AATTTACATCGTACAAGTCG+GGG - chr6.3:75750337-75750356 MS.gene05364:intron 35.0%
ACCATAATCTATCAAGGACA+AGG + chr6.3:75749650-75749669 None:intergenic 35.0%
ACTAGTTGAACCTACTGATA+TGG - chr6.3:75749034-75749053 MS.gene05364:intron 35.0%
ACTATCATGTGTGGTTTCAT+TGG + chr6.3:75748374-75748393 None:intergenic 35.0%
AGAAGGAACAAAACATGTCA+TGG - chr6.3:75748556-75748575 MS.gene05364:CDS 35.0%
ATCTTTCTTGTGTGTTTAGG+AGG - chr6.3:75752811-75752830 MS.gene05364:CDS 35.0%
ATGCATTATATGGCTTATGC+TGG - chr6.3:75749532-75749551 MS.gene05364:intron 35.0%
CAAAGGGCCCAAAAAAAAAT+GGG + chr6.3:75749966-75749985 None:intergenic 35.0%
CGTGGAAACTATATATTGCA+AGG + chr6.3:75752275-75752294 None:intergenic 35.0%
CTATATATTGCAAGGAATCC+GGG + chr6.3:75752267-75752286 None:intergenic 35.0%
GAGCCGTCAAAAAATTATGA+GGG - chr6.3:75750262-75750281 MS.gene05364:intron 35.0%
TATACATAGTCGGTACGTTT+GGG - chr6.3:75748877-75748896 MS.gene05364:intron 35.0%
TATATAGTTTCCACGCAGTA+AGG - chr6.3:75752280-75752299 MS.gene05364:intron 35.0%
TCAATGAGAAACAACAAAGG+AGG + chr6.3:75749148-75749167 None:intergenic 35.0%
TCCTTGTCCTTGATAGATTA+TGG - chr6.3:75749646-75749665 MS.gene05364:intron 35.0%
TGAAAGGATAACACATAGAG+AGG - chr6.3:75748714-75748733 MS.gene05364:intron 35.0%
TGACACTAAGACATGAACAT+TGG - chr6.3:75749739-75749758 MS.gene05364:intron 35.0%
TGAGCCGTCAAAAAATTATG+AGG - chr6.3:75750261-75750280 MS.gene05364:intron 35.0%
TGGATGTAACCGATTAACTA+AGG - chr6.3:75751829-75751848 MS.gene05364:intron 35.0%
TTAAAGGAGCTAGACTAATG+GGG - chr6.3:75752010-75752029 MS.gene05364:intron 35.0%
TTATCACAGGACACATGAAA+TGG - chr6.3:75748215-75748234 MS.gene05364:CDS 35.0%
TTGCAAACTCACTTGACAAA+TGG + chr6.3:75752709-75752728 None:intergenic 35.0%
TTGGAAAGCTAAAGAATCAC+TGG + chr6.3:75749210-75749229 None:intergenic 35.0%
TTTGAATGAATTCGGTACGT+GGG - chr6.3:75748851-75748870 MS.gene05364:intron 35.0%
TTTGTTGGATCAAGACCATA+TGG - chr6.3:75751155-75751174 MS.gene05364:intron 35.0%
! TTGTGAGTGAAGAACCATTT+TGG + chr6.3:75750289-75750308 None:intergenic 35.0%
!! AGTGATTCTTTAGCTTTCCA+AGG - chr6.3:75749209-75749228 MS.gene05364:intron 35.0%
!! ATGTGGATTTTCAGGATGTT+TGG - chr6.3:75748587-75748606 MS.gene05364:intron 35.0%
!! CAAGAAGTGGATTGGATTAA+AGG + chr6.3:75748304-75748323 None:intergenic 35.0%
!! GATTAACTAAGGCTTGTTAG+TGG - chr6.3:75751840-75751859 MS.gene05364:intron 35.0%
!! GTGTTTGTGTTTTTGTTTCG+TGG - chr6.3:75750817-75750836 MS.gene05364:intron 35.0%
!!! AGCGTTCATCTTATTTTGGA+AGG - chr6.3:75750895-75750914 MS.gene05364:intron 35.0%
!!! GGTCCCTCATAATTTTTTGA+CGG + chr6.3:75750268-75750287 None:intergenic 35.0%
!!! GTTTTGGTTACTATCATGTG+TGG + chr6.3:75748383-75748402 None:intergenic 35.0%
!!! TGTTGATGATGTGGATTTTC+AGG - chr6.3:75748579-75748598 MS.gene05364:CDS 35.0%
AAAACATATGTCTTCGGACC+CGG - chr6.3:75752246-75752265 MS.gene05364:intron 40.0%
AATTGTGTCTACTTCTCCGA+CGG + chr6.3:75750457-75750476 None:intergenic 40.0%
ACACAATTCGCAATTCGCTT+CGG - chr6.3:75748794-75748813 MS.gene05364:intron 40.0%
ACACGAATTCAGATTGTCTG+TGG + chr6.3:75751296-75751315 None:intergenic 40.0%
ACAGGAAAAAGAAGAGCAGA+AGG - chr6.3:75748539-75748558 MS.gene05364:CDS 40.0%
ATGTGGCTAATACGGAATGT+GGG - chr6.3:75751261-75751280 MS.gene05364:intron 40.0%
ATTTACATCGTACAAGTCGG+GGG - chr6.3:75750338-75750357 MS.gene05364:intron 40.0%
CAAAGCAACAATGTCACGAA+GGG + chr6.3:75752492-75752511 None:intergenic 40.0%
CACGTGATCAATTTAGAGAC+TGG - chr6.3:75752040-75752059 MS.gene05364:intron 40.0%
CATATGGATCACGATGCAAA+CGG + chr6.3:75752520-75752539 None:intergenic 40.0%
CTCGTGATCTTCAGAATACA+AGG + chr6.3:75752186-75752205 None:intergenic 40.0%
CTTTGAATGAATTCGGTACG+TGG - chr6.3:75748850-75748869 MS.gene05364:intron 40.0%
GAACCCGGTTCATGAAAATT+CGG + chr6.3:75749349-75749368 None:intergenic 40.0%
GAAGTCCCAGAAACAAATCA+AGG - chr6.3:75748239-75748258 MS.gene05364:CDS 40.0%
GAATTCAGATTGTCTGTGGT+CGG + chr6.3:75751292-75751311 None:intergenic 40.0%
GACTATCGATGTGGCTAATA+CGG - chr6.3:75751253-75751272 MS.gene05364:intron 40.0%
GAGACATTCATGATCATGCA+TGG - chr6.3:75751326-75751345 MS.gene05364:intron 40.0%
GATACTGGATTTGCAAGAAG+TGG + chr6.3:75748317-75748336 None:intergenic 40.0%
GCAAAGGGCCCAAAAAAAAA+TGG + chr6.3:75749967-75749986 None:intergenic 40.0%
GCAACACAACAACATACATG+TGG + chr6.3:75749797-75749816 None:intergenic 40.0%
GCTTCGAATGTTTCTTCTGA+TGG - chr6.3:75751029-75751048 MS.gene05364:intron 40.0%
GGAAAGTAGATGTACGAAGA+TGG + chr6.3:75752428-75752447 None:intergenic 40.0%
GTATACATAGTCGGTACGTT+TGG - chr6.3:75748876-75748895 MS.gene05364:intron 40.0%
GTCAATGCTTCCATATCAGT+AGG + chr6.3:75749047-75749066 None:intergenic 40.0%
GTCGTTGGATCAAAATTGCA+CGG + chr6.3:75751236-75751255 None:intergenic 40.0%
GTTGTGTTGCACACACATAT+CGG - chr6.3:75749807-75749826 MS.gene05364:intron 40.0%
TAAAGGAGCTAGACTAATGG+GGG - chr6.3:75752011-75752030 MS.gene05364:intron 40.0%
TAACAGCAATTGCTTGAGCT+GGG - chr6.3:75752564-75752583 MS.gene05364:CDS 40.0%
TCAGATAAGAATCCAGTTCC+AGG + chr6.3:75748619-75748638 None:intergenic 40.0%
TGAGAAAGTGGAAAAGAGAG+TGG + chr6.3:75748341-75748360 None:intergenic 40.0%
TGGATTTGCAAGAAGTGGAT+TGG + chr6.3:75748312-75748331 None:intergenic 40.0%
TTCATGTGTCCTGTGATAAC+AGG + chr6.3:75748214-75748233 None:intergenic 40.0%
TTCTTCTGATGGTATTGCTG+AGG - chr6.3:75751040-75751059 MS.gene05364:intron 40.0%
TTGAATGAATTCGGTACGTG+GGG - chr6.3:75748852-75748871 MS.gene05364:intron 40.0%
TTTACTGCATCAACCTTCAG+AGG - chr6.3:75748433-75748452 MS.gene05364:intron 40.0%
! AGGCTCGTCCTTGATAATTA+TGG + chr6.3:75752142-75752161 None:intergenic 40.0%
! ATTGGAAGCGTGTACGTATA+TGG + chr6.3:75750605-75750624 None:intergenic 40.0%
! CCTACCGAATTTTCATGAAC+CGG - chr6.3:75749342-75749361 MS.gene05364:intron 40.0%
! CTACCGAATTTTCATGAACC+GGG - chr6.3:75749343-75749362 MS.gene05364:intron 40.0%
! GATATTTTCACAACTCGTCG+TGG - chr6.3:75750969-75750988 MS.gene05364:intron 40.0%
!! ATGTCATGGTGTTGATGATG+TGG - chr6.3:75748570-75748589 MS.gene05364:CDS 40.0%
!! ATTCTTTAGCTTTCCAAGGC+TGG - chr6.3:75749213-75749232 MS.gene05364:intron 40.0%
!! CTTCGTGACATTGTTGCTTT+GGG - chr6.3:75752491-75752510 MS.gene05364:CDS 40.0%
!! GATTTTCAGGATGTTTGGTG+TGG - chr6.3:75748592-75748611 MS.gene05364:intron 40.0%
!! GGATGTGTTGTTTGAGAAAG+TGG + chr6.3:75748353-75748372 None:intergenic 40.0%
!! TGGCAGCGTTCATCTTATTT+TGG - chr6.3:75750891-75750910 MS.gene05364:intron 40.0%
!! TTCGTGACATTGTTGCTTTG+GGG - chr6.3:75752492-75752511 MS.gene05364:CDS 40.0%
!!! ACTTTTTTGTCTGGTTCGCT+GGG - chr6.3:75749284-75749303 MS.gene05364:intron 40.0%
AAAGGAGCTAGACTAATGGG+GGG - chr6.3:75752012-75752031 MS.gene05364:intron 45.0%
ACGACTTCTTGCTTACAGAC+TGG + chr6.3:75752932-75752951 None:intergenic 45.0%
AGACACCTGTTGTGATGTAC+CGG + chr6.3:75748473-75748492 None:intergenic 45.0%
AGCTAAGATTCCTTACTGCG+TGG + chr6.3:75752293-75752312 None:intergenic 45.0%
AGTCTGTAAGCAAGAAGTCG+TGG - chr6.3:75752931-75752950 MS.gene05364:CDS 45.0%
ATCACAACAGGTGTCTGTAC+CGG - chr6.3:75748477-75748496 MS.gene05364:CDS 45.0%
ATTGGCAAGGGAAGAAGAAC+AGG - chr6.3:75748521-75748540 MS.gene05364:CDS 45.0%
CCAAAGCAACAATGTCACGA+AGG + chr6.3:75752493-75752512 None:intergenic 45.0%
CCGGTTCATGAAAATTCGGT+AGG + chr6.3:75749345-75749364 None:intergenic 45.0%
CGACTTCTTGCTTACAGACT+GGG + chr6.3:75752931-75752950 None:intergenic 45.0%
CTCACATCTTACCACCTTGT+GGG - chr6.3:75752447-75752466 MS.gene05364:CDS 45.0%
CTTGATCCAACAAACGCTGA+CGG + chr6.3:75751149-75751168 None:intergenic 45.0%
GAATTCGGATTGTCTGCAGT+CGG - chr6.3:75751097-75751116 MS.gene05364:intron 45.0%
GATGTGGCTAATACGGAATG+TGG - chr6.3:75751260-75751279 MS.gene05364:intron 45.0%
GCAGGCGAATTATGTGACTA+TGG - chr6.3:75749421-75749440 MS.gene05364:intron 45.0%
GGAAAAGAGAGTGGAGATAC+TGG + chr6.3:75748332-75748351 None:intergenic 45.0%
GTAACAGCAATTGCTTGAGC+TGG - chr6.3:75752563-75752582 MS.gene05364:CDS 45.0%
GTCGAGATCTGTAACTGTGT+GGG - chr6.3:75752399-75752418 MS.gene05364:intron 45.0%
GTCGGAGAAGTAGACACAAT+TGG - chr6.3:75750456-75750475 MS.gene05364:intron 45.0%
TCTGATGGTATTGCTGAGGT+TGG - chr6.3:75751044-75751063 MS.gene05364:intron 45.0%
TGAATGAATTCGGTACGTGG+GGG - chr6.3:75748853-75748872 MS.gene05364:intron 45.0%
TGATCCAACGACTATCGATG+TGG - chr6.3:75751244-75751263 MS.gene05364:intron 45.0%
TGATTCGATCCTCTGCAGAT+TGG - chr6.3:75748503-75748522 MS.gene05364:CDS 45.0%
TGTGGCTAATACGGAATGTG+GGG - chr6.3:75751262-75751281 MS.gene05364:intron 45.0%
TTAGCCACATCGATAGTCGT+TGG + chr6.3:75751251-75751270 None:intergenic 45.0%
TTGAGAAGCAATTCCAGCCT+TGG + chr6.3:75749229-75749248 None:intergenic 45.0%
TTGATCCAACAAACGCTGAC+GGG + chr6.3:75751148-75751167 None:intergenic 45.0%
! CCTTCGTGACATTGTTGCTT+TGG - chr6.3:75752490-75752509 MS.gene05364:CDS 45.0%
!! AGGCTTGTTAGTGGAAGTTC+TGG - chr6.3:75751849-75751868 MS.gene05364:intron 45.0%
!! GGGTGCCTTGATTTGTTTCT+GGG + chr6.3:75748247-75748266 None:intergenic 45.0%
!! TACCGACTCTTAAGACCTGA+AGG + chr6.3:75749845-75749864 None:intergenic 45.0%
!! TTCGCAAAAGTACCGCGAAT+CGG - chr6.3:75749366-75749385 MS.gene05364:intron 45.0%
!!! CGTCGTGGATTAGAGTCTTT+TGG - chr6.3:75750984-75751003 MS.gene05364:intron 45.0%
!!! GACTTTTTTGTCTGGTTCGC+TGG - chr6.3:75749283-75749302 MS.gene05364:intron 45.0%
!!! ATTAGTTTAATTTTTTTTTT+TGG - chr6.3:75749261-75749280 MS.gene05364:intron 5.0%
AAGTTTCCCGTGCCTGTGAT+GGG - chr6.3:75749179-75749198 MS.gene05364:intron 50.0%
ACCCCTCGCATTTCTGTAGT+TGG - chr6.3:75751122-75751141 MS.gene05364:intron 50.0%
ATTCGCTTCGGTACGTGGTA+CGG - chr6.3:75748806-75748825 MS.gene05364:intron 50.0%
CCACAAGGTGGTAAGATGTG+AGG + chr6.3:75752449-75752468 None:intergenic 50.0%
CCTCACATCTTACCACCTTG+TGG - chr6.3:75752446-75752465 MS.gene05364:CDS 50.0%
CGCCTTCAGGTCTTAAGAGT+CGG - chr6.3:75749840-75749859 MS.gene05364:intron 50.0%
CTTGAGCTGGGAGAGAGAAT+TGG - chr6.3:75752576-75752595 MS.gene05364:CDS 50.0%
GAATGAATTCGGTACGTGGG+GGG - chr6.3:75748854-75748873 MS.gene05364:intron 50.0%
GATCCTCTGCAGATTGGCAA+GGG - chr6.3:75748509-75748528 MS.gene05364:CDS 50.0%
GCATCAACCTTCAGAGGACT+CGG - chr6.3:75748439-75748458 MS.gene05364:intron 50.0%
GCCAACTACAGAAATGCGAG+GGG + chr6.3:75751126-75751145 None:intergenic 50.0%
GGCCAACTACAGAAATGCGA+GGG + chr6.3:75751127-75751146 None:intergenic 50.0%
GGTCGAGATCTGTAACTGTG+TGG - chr6.3:75752398-75752417 MS.gene05364:intron 50.0%
GTGGCTAATACGGAATGTGG+GGG - chr6.3:75751263-75751282 MS.gene05364:intron 50.0%
! ACGTGGGGGGTATACATAGT+CGG - chr6.3:75748867-75748886 MS.gene05364:intron 50.0%
! TGCTGCTGCTGATGTTTCTG+TGG - chr6.3:75748639-75748658 MS.gene05364:intron 50.0%
!! GGGGTGCCTTGATTTGTTTC+TGG + chr6.3:75748248-75748267 None:intergenic 50.0%
AACAACTTTGGCGTGCGTCG+AGG + chr6.3:75752162-75752181 None:intergenic 55.0%
CAAGTTTCCCGTGCCTGTGA+TGG - chr6.3:75749178-75749197 MS.gene05364:intron 55.0%
CACATAATTCGCCTGCCAGC+TGG + chr6.3:75749417-75749436 None:intergenic 55.0%
CACCTGTTGTGATGTACCGG+CGG + chr6.3:75748470-75748489 None:intergenic 55.0%
CATCACAGGCACGGGAAACT+TGG + chr6.3:75749180-75749199 None:intergenic 55.0%
CGATCCTCTGCAGATTGGCA+AGG - chr6.3:75748508-75748527 MS.gene05364:CDS 55.0%
CGGACATCAAACACGCCTTC+AGG - chr6.3:75749827-75749846 MS.gene05364:intron 55.0%
CTTCCCTTGCCAATCTGCAG+AGG + chr6.3:75748515-75748534 None:intergenic 55.0%
GCAGAGGATCGAATCACTGC+CGG + chr6.3:75748499-75748518 None:intergenic 55.0%
GGGCCAACTACAGAAATGCG+AGG + chr6.3:75751128-75751147 None:intergenic 55.0%
TCGCAATTCGCTTCGGTACG+TGG - chr6.3:75748801-75748820 MS.gene05364:intron 55.0%
TCTACTTCTCCGACGGCAGA+GGG + chr6.3:75750450-75750469 None:intergenic 55.0%
TTCGCTTCGGTACGTGGTAC+GGG - chr6.3:75748807-75748826 MS.gene05364:intron 55.0%
TTCGGTACGTGGTACGGGTT+CGG - chr6.3:75748812-75748831 MS.gene05364:intron 55.0%
! AGTCGGTACGTTTGGGTTCG+TGG - chr6.3:75748884-75748903 MS.gene05364:intron 55.0%
! TCGCGGTACTTTTGCGAACC+CGG + chr6.3:75749364-75749383 None:intergenic 55.0%
! TTGTCTGGTTCGCTGGGTAC+TGG - chr6.3:75749290-75749309 MS.gene05364:intron 55.0%
!! CAGGATGTTTGGTGTGGACC+TGG - chr6.3:75748598-75748617 MS.gene05364:intron 55.0%
!! GTACTGGTTCGCTGGGTACT+GGG - chr6.3:75749306-75749325 MS.gene05364:intron 55.0%
!! GTTTGGTGTGGACCTGGAAC+TGG - chr6.3:75748604-75748623 MS.gene05364:intron 55.0%
!! TCACTGGTTCCACCCATCAC+AGG + chr6.3:75749194-75749213 None:intergenic 55.0%
CACCGCCGGTACATCACAAC+AGG - chr6.3:75748465-75748484 MS.gene05364:CDS 60.0%
CAGTGCACGATGCTCCCACA+AGG + chr6.3:75752464-75752483 None:intergenic 60.0%
GGTGCAACCGAGTCCTCTGA+AGG + chr6.3:75748449-75748468 None:intergenic 60.0%
GGTTCCACCCATCACAGGCA+CGG + chr6.3:75749189-75749208 None:intergenic 60.0%
GTCTACTTCTCCGACGGCAG+AGG + chr6.3:75750451-75750470 None:intergenic 60.0%
GTTCCACCCATCACAGGCAC+GGG + chr6.3:75749188-75749207 None:intergenic 60.0%
GTTGGCCCGTCAGCGTTTGT+TGG - chr6.3:75751140-75751159 MS.gene05364:intron 60.0%
TCGGTACGTGGTACGGGTTC+GGG - chr6.3:75748813-75748832 MS.gene05364:intron 60.0%
TGCACGATGCTCCCACAAGG+TGG + chr6.3:75752461-75752480 None:intergenic 60.0%
! TTTCCCGTGCCTGTGATGGG+TGG - chr6.3:75749182-75749201 MS.gene05364:intron 60.0%
!! GCGAATCGGTTCGTGCGAAC+CGG - chr6.3:75749380-75749399 MS.gene05364:intron 60.0%
!! GGTACTGGTTCGCTGGGTAC+TGG - chr6.3:75749305-75749324 MS.gene05364:intron 60.0%
!! GGTTCGCACGAACCGATTCG+CGG + chr6.3:75749381-75749400 None:intergenic 60.0%
!! TCGCTGGGTACTGGTTCGCT+GGG - chr6.3:75749299-75749318 MS.gene05364:intron 60.0%
!! TTCGCTGGGTACTGGTTCGC+TGG - chr6.3:75749298-75749317 MS.gene05364:intron 60.0%
CCAGCTGGAGAACCGCGAAC+CGG + chr6.3:75749402-75749421 None:intergenic 65.0%
GGAACTGCTCCCTCTGCCGT+CGG - chr6.3:75750438-75750457 MS.gene05364:intron 65.0%
GTGGTACGGGTTCGGGTACG+CGG - chr6.3:75748820-75748839 MS.gene05364:intron 65.0%
TTCGCGGTTCTCCAGCTGGC+AGG - chr6.3:75749403-75749422 MS.gene05364:intron 65.0%
! AGAGGACTCGGTTGCACCGC+CGG - chr6.3:75748451-75748470 MS.gene05364:intron 65.0%
!! GGTTCGTGCGAACCGGTTCG+CGG - chr6.3:75749387-75749406 MS.gene05364:intron 65.0%
! CCGGTTCGCGGTTCTCCAGC+TGG - chr6.3:75749399-75749418 MS.gene05364:intron 70.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 75748208 75752964 75748208 ID=MS.gene05364
chr6.3 mRNA 75748208 75752964 75748208 ID=MS.gene05364.t1;Parent=MS.gene05364
chr6.3 exon 75752437 75752964 75752437 ID=MS.gene05364.t1.exon1;Parent=MS.gene05364.t1
chr6.3 CDS 75752437 75752964 75752437 ID=cds.MS.gene05364.t1;Parent=MS.gene05364.t1
chr6.3 exon 75750111 75750275 75750111 ID=MS.gene05364.t1.exon2;Parent=MS.gene05364.t1
chr6.3 CDS 75750111 75750275 75750111 ID=cds.MS.gene05364.t1;Parent=MS.gene05364.t1
chr6.3 exon 75749080 75749172 75749080 ID=MS.gene05364.t1.exon3;Parent=MS.gene05364.t1
chr6.3 CDS 75749080 75749172 75749080 ID=cds.MS.gene05364.t1;Parent=MS.gene05364.t1
chr6.3 exon 75748456 75748602 75748456 ID=MS.gene05364.t1.exon4;Parent=MS.gene05364.t1
chr6.3 CDS 75748456 75748602 75748456 ID=cds.MS.gene05364.t1;Parent=MS.gene05364.t1
chr6.3 exon 75748208 75748342 75748208 ID=MS.gene05364.t1.exon5;Parent=MS.gene05364.t1
chr6.3 CDS 75748208 75748342 75748208 ID=cds.MS.gene05364.t1;Parent=MS.gene05364.t1
Gene Sequence

>MS.gene05364

ATGCCTGTTATCACAGGACACATGAAATGGAGAAGTCCCAGAAACAAATCAAGGCACCCCATTTCAGAAACTGATCAAACTTCACAACTTTCTCCTTTAATCCAATCCACTTCTTGCAAATCCAGTATCTCCACTCTCTTTTCCACTTTCTCAAACAACACATCCAATGAAACCACACATGATAGTAACCAAAACAGAACAAAAAAGAACAACAACAATAGCAACTTTACTGCATCAACCTTCAGAGGACTCGGTTGCACCGCCGGTACATCACAACAGGTGTCTGTACCGGCAGTGATTCGATCCTCTGCAGATTGGCAAGGGAAGAAGAACAGGAAAAAGAAGAGCAGAAGGAACAAAACATGTCATGGTGTTGATGATGTGGATTTTCAGGATGTTTGGTGTGGACCTGGAACTGGATTCTTATCTGATGCTGCTGCTGATGTTTCTGTGGATTGTGTTGTTGCTAGAAAGAATGTTTCTTCAAGAGGAAAACTTGATAATGGTGAAAGGATAACACATAGAGAGGTATATTTCGTCATTCTTGATCAATTTTTAGTTCTCTTGAATAGTTTCATGCATAGTCACACAATTCGCAATTCGCTTCGGTACGTGGTACGGGTTCGGGTACGCGGTTCGCAACTTTGAATGAATTCGGTACGTGGGGGGTATACATAGTCGGTACGTTTGGGTTCGTGGCACTTCAAATATAGTAATCATACACTATAAATAACAATTTTTTTTCAATAAAAATATAAATAAACAATGAAAATATTAATGCTATCAATAGAAATAATAAAATTTTTGAAAAAATTTAGAGACATGTACTAGTTGAACCTACTGATATGGAAGCATTGACATATATTAGTTGAACTAGCTAGTCCCACATCGAATATTTCACAAACATGGATGGAAAGCTCTCTTATAAATAAAGCAGCCTCCTTTGTTGTTTCTCATTGAATTGAATTACCAAGTTTCCCGTGCCTGTGATGGGTGGAACCAGTGATTCTTTAGCTTTCCAAGGCTGGAATTGCTTCTCAAGAGTCATTGGTAATTAGTTTAATTTTTTTTTTTGGACTTTTTTGTCTGGTTCGCTGGGTACTGGTTCGCTGGGTACTGGGTTCTAAACGAATTCCTACCGAATTTTCATGAACCGGGTTCGCAAAAGTACCGCGAATCGGTTCGTGCGAACCGGTTCGCGGTTCTCCAGCTGGCAGGCGAATTATGTGACTATGGTTTCATGTCTCAAACTGTTGACTTTTGATTCTTTGTTATCTTGTGTGTTCAATTTTATAGACCATGATTATTTGATTAATTGATTTTTATGCATTATATGGCTTATGCTGGAATTGTAATACGGTTAACATTATTTTTTGGTTTTGTTTTTAATTGCACTCACACTTACCTTTGATTTTGATTATTAGTTTTGTAGGTTTATTCCTTGTCCTTGATAGATTATGGTCTTTTATTAATTCCATTTTGGCTTGTTAAAGAGAAAAAAAAATGCATTCACACACACGGACACCGAATATGACACTAAGACATGAACATTGGTATAATTTGAGAAAATGATATATTAAATATAACCACATGTATGTTGTTGTGTTGCACACACATATCGGACATCAAACACGCCTTCAGGTCTTAAGAGTCGGTAGCAGAAAGTCTAATGTTGATGTGATGGTTCAAACAAGTGAATGTATAGAATTCATTTATGAAGAGATGAAGTCTTTTGTTCAATTTAAGCTAGTAGGACCCATTTTTTTTTGGGCCCTTTGCAATAATGACATTTTTAGATTAAATTATTTGAGTTTATCTCTTGAAATATTTCGTATGACATATCCATAAGCTATATTCAAAAGCTTAGGGAGCACTGCTTATCAAAACAAATTAACTTTATTTATTTTTATATATATAAGTAACTTTTTTGAGATGACATTTTCATACTAGGGACAAATTAGTCGTTGATTCATTATAATAGAGGGACTAATATGTTCCCGATATAAAAATGTCAAGGATCAATTTGAGTTTTATTTTTGTCAGAGATTTGAATTGAGCCGTCAAAAAATTATGAGGGACCAAAATGGTTCTTCACTCACAAATTTATTAGAAAAATAAATAAATAAATAAATTTACATCGTACAAGTCGGGGGTAATATTGTAATCTTCACTATGGTATATAAATACAAGGTGCTAACTACAAACCCTAATCTATCACTCATAACAAAAAGGAACTGCTCCCTCTGCCGTCGGAGAAGTAGACACAATTGGCCGAATTTCGTTACATGTTACATTACATGTGTGTTCTTTCTTTATCATTTCTTTACTCTTTCGATGATGTTTACTGTTCTAACAAAAATCATTATATAGTAACAGCGACTATACAACTTTTCTCCATATACGTACACGCTTCCAATTTCTAAAAGTCATACGTATAACAATTTTCTTGATTGATTTATTGTGGACCCCTTGAAAATAAGTCTAGTGATCATAGACTTTGAAATTATGTATCATTTCTATTATAATTATATAGCTTTGTTTTATTTTTGTTTTATTCTATTGTTGCATGACATACATGTTAATGATTGGTTATAGTTTTTGATTCATGTGTGTTTGTGTTTTTGTTTCGTGGTTGTTTTGGTTACTACTTGTTCTTAGATATGTTATAAAATTTTATATGTGTTGGCAGCGTTCATCTTATTTTGGAAGGCGCAGTGTAAACCTAAATCAAGAAAGTTTGTCATTTTTGGAAGATAATTCTGATATTTTCACAACTCGTCGTGGATTAGAGTCTTTTGGAAATAGTGGATTTTGTCGTAATGCTTCGAATGTTTCTTCTGATGGTATTGCTGAGGTTGGTTCTTACTATTATCCTCTTTTCATTTCTTTGAATTCGGATTGTCTGCAGTCGGTAACCCCTCGCATTTCTGTAGTTGGCCCGTCAGCGTTTGTTGGATCAAGACCATATGGCCTAGATGTTAAGTTTTTTATTTTAAAACTTAAAATACGAAATTTGAAATATGGACCGTGCAATTTTGATCCAACGACTATCGATGTGGCTAATACGGAATGTGGGGGTTGCCGACCACAGACAATCTGAATTCGTGTTGCTTTGTTTGAGACATTCATGATCATGCATGGTTCATAGAAACACATTGTTGTTGTTGACAAAATGGTGATAGAAATATTGATGAGTTAAAATGAGTTATTCATATCATTATAGGTTATTTGTTGTTTGGAATTTGGTTTGTCATTGAATTTAATTTGATTAAAAATGTTAAATTTGTTGTATAATTTTATCTTTAGTGCTTTAGGAGGATTTGAAGTTTATCATTTATGTGCTTTACTTATAAATTTGTGACATCAAAGTTTTATCTCATTTAAAACCTAAAATCAGAAAAAGTTTATGTGTTATTTTAATTTGAGTGCTATGGACTTGTAACTATTTTGAGCTCACTGTTCTAGCTGATTTTTTTTGGTAACTTCTAGCAGATTAGTATATGGTATTATTTAACCAAATATTAGAATGTCTTTAGTTAGATTTGCATACTTATTTTATTTTGGCTATATTGTTTATATATTTATGTTTATCATATTTTTTTTCTTTCTATTTTTGGATTATGGATGTAACCGATTAACTAAGGCTTGTTAGTGGAAGTTCTGGTTTATTATAAAATGGAACAAACAAACATGTGTGCTTAAGAGCATTGTGTTACATACATAATACTAATTTTTATTGTATTCTTTCGTTCAAGAGATAATATATTTATTAGCTTGATTGTTGCTTTGAAGATAATGAAATTTAAAGGAGCTAGACTAATGGGGGGACGATCACGTGATCAATTTAGAGACTGGAGACTTGATGTTGATAATATGTCATACGAGGTGAGTTCTTTATCCATTAATGCTCTCTATTTTTTACTTAATATTGCCATAATTATCAAGGACGAGCCTCGACGCACGCCAAAGTTGTTACCTTGTATTCTGAAGATCACGAGTTCAAATTTTGGAAACAATCTATTGGATTTCTAAGGTAACAAAACATATGTCTTCGGACCCGGATTCCTTGCAATATATAGTTTCCACGCAGTAAGGAATCTTAGCTCTTGATTTCAGATCAGATGACTTAGATTACACAAGTAGTAAGTTAATTTCAAATGATCTCGACCATCTATCTATTTAGATCATGTGGTCGAGATCTGTAACTGTGTGGGTGTCCATCTTCGTACATCTACTTTCCTCACATCTTACCACCTTGTGGGAGCATCGTGCACTGAGCTGCCCTTCGTGACATTGTTGCTTTGGGGTACCGTTTGCATCGTGATCCATATGTTCATAGAAATTTGTGGTTTTATGTAACAGCAATTGCTTGAGCTGGGAGAGAGAATTGGTTATGTGAAAACTGGACTTAAAGAAGATGAGATGAAAAACAACATAAGGAAAATTAAGCTTTTGATTTCAAATGATTCATCAAAGCATCAAATAGACAAAAAGTGCACCATTTGTCAAGTGAGTTTGCAAAATCCAAATTAAAGTTTCATATTTAAAAAGTTCATATCATCACTTTATATCATTCATTTGCTATATAGTATAATGTTTATGTATCTTTCTTGTGTGTTTAGGAGGAGTATGAATCAGATGATGAATTGGGTAGATTACACTGTGAACACAGCTATCACTTTCAGTGTATAAAACAATGGCTTGTGCTTAAGAACTTCTGCCCAGTCTGTAAGCAAGAAGTCGTGGTTCGACCTTGA

Protein sequence

>MS.gene05364.t1

MPVITGHMKWRSPRNKSRHPISETDQTSQLSPLIQSTSCKSSISTLFSTFSNNTSNETTHDSNQNRTKKNNNNSNFTASTFRGLGCTAGTSQQVSVPAVIRSSADWQGKKNRKKKSRRNKTCHGVDDVDFQDVWCGPGTGFLSDAAADVSVDCVVARKNVSSRGKLDNGERITHRERSSYFGRRSVNLNQESLSFLEDNSDIFTTRRGLESFGNSGFCRNASNVSSDGIAEIMKFKGARLMGGRSRDQFRDWRLDVDNMSYEQLLELGERIGYVKTGLKEDEMKNNIRKIKLLISNDSSKHQIDKKCTICQEEYESDDELGRLHCEHSYHFQCIKQWLVLKNFCPVCKQEVVVRP