AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene073020

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene073020.t1 MTR_3g109030 99.174 726 6 0 1 726 1 726 0.0 1497
MS.gene073020.t1 MTR_2g460590 70.977 727 174 6 1 726 1 691 0.0 1053
MS.gene073020.t1 MTR_7g034605 62.310 658 223 7 69 720 40 678 0.0 858
MS.gene073020.t1 MTR_3g088875 59.104 670 254 8 68 725 31 692 0.0 808
MS.gene073020.t1 MTR_2g094860 57.485 668 253 7 60 722 62 703 0.0 776
MS.gene073020.t1 MTR_4g058730 62.326 576 207 4 60 633 44 611 0.0 751
MS.gene073020.t1 MTR_4g130820 55.126 673 266 9 61 725 87 731 0.0 724
MS.gene073020.t1 MTR_1g064240 53.313 664 292 6 60 720 58 706 0.0 722
MS.gene073020.t1 MTR_1g028370 53.464 664 265 10 70 720 80 712 0.0 711
MS.gene073020.t1 MTR_3g091080 49.600 750 315 14 1 724 1 713 0.0 709
MS.gene073020.t1 MTR_7g117310 49.852 676 277 11 70 722 80 716 0.0 637
MS.gene073020.t1 MTR_7g117310 49.852 676 277 11 70 722 92 728 0.0 637
MS.gene073020.t1 MTR_7g117310 49.852 676 277 11 70 722 26 662 0.0 637
MS.gene073020.t1 MTR_8g027755 47.951 659 305 8 73 719 85 717 0.0 624
MS.gene073020.t1 MTR_6g477760 40.809 593 316 12 73 646 123 699 2.50e-132 407
MS.gene073020.t1 MTR_5g007630 40.536 597 311 15 73 652 172 741 1.09e-130 405
MS.gene073020.t1 MTR_8g464570 39.562 594 316 14 74 645 63 635 1.11e-128 397
MS.gene073020.t1 MTR_6g075440 37.124 598 334 14 73 650 169 744 3.26e-126 394
MS.gene073020.t1 MTR_6g075440 37.124 598 334 14 73 650 169 744 3.91e-126 394
MS.gene073020.t1 MTR_6g075290 39.626 588 317 11 68 637 188 755 2.22e-120 379
MS.gene073020.t1 MTR_2g081110 38.031 589 333 15 71 645 61 631 1.77e-116 365
MS.gene073020.t1 MTR_7g012260 37.607 585 349 9 72 647 108 685 1.20e-112 357
MS.gene073020.t1 MTR_6g075290 39.891 549 296 11 107 637 21 553 1.38e-110 347
MS.gene073020.t1 MTR_6g075290 40.296 541 289 10 115 637 190 714 2.14e-108 346
MS.gene073020.t1 MTR_6g075390 37.057 564 320 14 72 619 114 658 3.91e-107 341
MS.gene073020.t1 MTR_6g075410 32.759 580 357 12 72 637 97 657 1.26e-93 305
MS.gene073020.t1 MTR_6g076060 36.059 477 275 12 194 654 14 476 6.96e-82 270
MS.gene073020.t1 MTR_2g094810 64.220 109 39 0 156 264 12 120 5.07e-42 149
MS.gene073020.t1 MTR_6g075320 32.520 123 79 1 72 194 148 266 1.67e-20 93.2
MS.gene073020.t1 MTR_6g075460 41.379 87 50 1 572 657 45 131 3.78e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene073020.t1 AT2G24610 68.673 731 214 5 1 722 1 725 0.0 1025
MS.gene073020.t1 AT2G24610 71.449 683 187 2 46 722 60 740 0.0 1018
MS.gene073020.t1 AT4G30360 64.092 738 234 10 1 725 1 720 0.0 959
MS.gene073020.t1 AT5G14870 59.704 675 249 6 69 725 36 705 0.0 841
MS.gene073020.t1 AT3G48010 59.940 669 244 7 70 719 41 704 0.0 813
MS.gene073020.t1 AT2G28260 56.410 663 250 6 60 722 55 678 0.0 758
MS.gene073020.t1 AT2G28260 56.410 663 250 6 60 722 15 638 0.0 758
MS.gene073020.t1 AT1G15990 55.804 672 276 11 61 722 78 738 0.0 733
MS.gene073020.t1 AT5G57940 53.502 671 274 7 61 722 69 710 0.0 715
MS.gene073020.t1 AT5G57940 53.502 671 274 7 61 722 76 717 0.0 715
MS.gene073020.t1 AT5G57940 53.502 671 274 7 61 722 76 717 0.0 715
MS.gene073020.t1 AT1G19780 55.030 676 285 9 61 726 85 751 0.0 712
MS.gene073020.t1 AT2G23980 53.314 679 276 6 61 722 91 745 0.0 708
MS.gene073020.t1 AT2G23980 53.314 679 276 6 61 722 91 745 0.0 708
MS.gene073020.t1 AT2G23980 53.314 679 276 6 61 722 64 718 0.0 708
MS.gene073020.t1 AT2G23980 53.314 679 276 6 61 722 91 745 0.0 708
MS.gene073020.t1 AT2G23980 53.314 679 276 6 61 722 91 745 0.0 708
MS.gene073020.t1 AT2G23980 53.314 679 276 6 61 722 91 745 0.0 708
MS.gene073020.t1 AT4G30560 53.869 672 268 9 61 722 91 730 0.0 706
MS.gene073020.t1 AT4G30560 53.869 672 268 9 61 722 91 730 0.0 706
MS.gene073020.t1 AT4G30560 53.869 672 268 9 61 722 65 704 0.0 704
MS.gene073020.t1 AT4G30560 53.869 672 268 9 61 722 65 704 0.0 704
MS.gene073020.t1 AT4G30560 53.869 672 268 9 61 722 65 704 0.0 704
MS.gene073020.t1 AT2G23980 51.709 702 275 7 61 722 91 768 0.0 695
MS.gene073020.t1 AT2G23980 51.709 702 275 7 61 722 91 768 0.0 695
MS.gene073020.t1 AT2G23980 51.709 702 275 7 61 722 91 768 0.0 695
MS.gene073020.t1 AT2G23980 51.709 702 275 7 61 722 91 768 0.0 695
MS.gene073020.t1 AT5G53130 52.474 667 267 7 72 722 83 715 0.0 692
MS.gene073020.t1 AT1G01340 46.631 742 348 11 1 726 1 710 0.0 668
MS.gene073020.t1 AT1G01340 48.755 683 324 7 51 726 42 705 0.0 667
MS.gene073020.t1 AT4G01010 50.379 659 290 10 70 721 65 693 0.0 667
MS.gene073020.t1 AT4G01010 50.379 659 290 10 70 721 65 693 0.0 667
MS.gene073020.t1 AT2G46430 48.182 660 307 8 72 722 71 704 0.0 626
MS.gene073020.t1 AT2G46430 48.182 660 307 8 72 722 71 704 0.0 626
MS.gene073020.t1 AT1G19780 55.166 542 232 6 193 726 2 540 0.0 576
MS.gene073020.t1 AT2G46440 43.699 611 310 9 84 689 40 621 5.05e-166 492
MS.gene073020.t1 AT2G46450 38.556 651 341 12 84 720 40 645 7.80e-148 446
MS.gene073020.t1 AT2G46450 38.556 651 341 12 84 720 40 645 7.80e-148 446
MS.gene073020.t1 AT2G46450 37.481 651 325 14 84 720 27 609 3.43e-137 417
MS.gene073020.t1 AT2G46450 37.481 651 325 14 84 720 40 622 3.80e-137 417
MS.gene073020.t1 AT2G46440 47.742 465 216 7 230 689 1 443 4.83e-136 408
MS.gene073020.t1 AT5G54250 37.604 601 344 12 64 645 68 656 5.00e-122 380
MS.gene073020.t1 AT5G54250 37.604 601 344 12 64 645 68 656 5.00e-122 380
MS.gene073020.t1 AT5G54250 37.604 601 344 12 64 645 68 656 5.00e-122 380
MS.gene073020.t1 AT3G17690 38.103 580 326 15 73 639 158 717 1.99e-119 375
MS.gene073020.t1 AT5G54250 37.105 601 342 13 64 645 68 651 3.68e-117 368
MS.gene073020.t1 AT5G15410 39.229 571 329 10 73 631 112 676 4.63e-116 366
MS.gene073020.t1 AT5G15410 39.229 571 329 10 73 631 113 677 5.01e-116 366
MS.gene073020.t1 AT3G17700 38.957 575 314 15 73 631 192 745 2.32e-114 363
MS.gene073020.t1 AT3G17690 37.854 494 284 10 73 562 158 632 7.32e-105 334
MS.gene073020.t1 AT3G17700 38.922 501 281 12 73 569 192 671 8.08e-102 327
MS.gene073020.t1 AT3G17690 36.658 371 219 8 73 439 158 516 2.47e-70 239

Find 139 sgRNAs with CRISPR-Local

Find 221 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAGAAATCACCAGGCTTTA+AGG 0.175254 3.4:+94355664 None:intergenic
TTGAAAACTTTGCTACTTTC+AGG 0.193295 3.4:+94356927 None:intergenic
ATCATCCATTTGTGAGAAAA+AGG 0.198307 3.4:+94355853 None:intergenic
TCCAGGAAGTGATATCTTTC+TGG 0.203240 3.4:-94358439 MS.gene073020:CDS
TTAACTATCTGAGAACTTAA+TGG 0.217102 3.4:+94357325 None:intergenic
GGCAAGTTGAGAGTAGATTT+TGG 0.242743 3.4:+94355611 None:intergenic
ATGGTTACTGATTTGAATTT+AGG 0.266613 3.4:-94358309 MS.gene073020:CDS
ATCCTATACTTGTAGGTCTT+AGG 0.275982 3.4:-94357122 MS.gene073020:intron
GTGGGCTGCTTGTTTCATTC+AGG 0.278581 3.4:-94355438 MS.gene073020:CDS
GCAATACTCATAGCTATCTT+AGG 0.306889 3.4:-94356600 MS.gene073020:CDS
ACCGAGAAATCTGGCTCTTC+AGG 0.315045 3.4:+94355161 None:intergenic
CTTGTTTCATTCAGGTTGCT+TGG 0.324454 3.4:-94355430 MS.gene073020:CDS
ACTTACAGGTTCTCCATTGA+TGG 0.335999 3.4:-94358642 MS.gene073020:intron
GCCTGAAGAGCCAGATTTCT+CGG 0.346000 3.4:-94355162 MS.gene073020:CDS
TCCTATACTTGTAGGTCTTA+GGG 0.348092 3.4:-94357121 MS.gene073020:intron
AAGATTATGCTTTCCATCAA+TGG 0.358305 3.4:+94358629 None:intergenic
GAATCTAGGTGTCACTATAT+TGG 0.375335 3.4:-94355258 MS.gene073020:CDS
TATTGAGCTTAATCATCTTC+AGG 0.380192 3.4:+94355134 None:intergenic
TTGAAAGGCATGCTACTTGC+TGG 0.383457 3.4:-94357076 MS.gene073020:CDS
GGTCTGTAGGGAGGCCTCTC+AGG 0.385793 3.4:+94356228 None:intergenic
TGAACATGGTCATAAAGTTT+AGG 0.386589 3.4:-94358239 MS.gene073020:CDS
CTTGAAAGCTCAACCACAAA+TGG 0.387154 3.4:-94355716 MS.gene073020:CDS
CCTTTGTGTCACCAAGTTCA+AGG 0.389502 3.4:-94358212 MS.gene073020:CDS
TCATGGGAGCTTCTAATTGC+TGG 0.396892 3.4:+94357418 None:intergenic
TTAACTGTTCTTGTAGAAGA+AGG 0.414807 3.4:+94355590 None:intergenic
TTTGTTGGCAGATTGTGATT+TGG 0.416028 3.4:-94357450 MS.gene073020:intron
GAAATGTATTCTTAACTACT+TGG 0.420344 3.4:-94357021 MS.gene073020:CDS
TGCTGCACTGCCACTTCCCC+AGG 0.420917 3.4:-94358106 MS.gene073020:intron
ATATCTTTCTGGAATGGAAA+AGG 0.422284 3.4:-94358428 MS.gene073020:CDS
GATTCAGAAAATTCTTAATC+CGG 0.425227 3.4:-94358583 MS.gene073020:CDS
TCCAGAAAGATATCACTTCC+TGG 0.429916 3.4:+94358438 None:intergenic
CGGAGAAGAGTTACTTGCTT+GGG 0.432621 3.4:-94355642 MS.gene073020:CDS
CCAATGCTCTCTTCTTGAAC+CGG 0.438239 3.4:+94355405 None:intergenic
CGGAAGGGGTGAACTTGTCA+TGG 0.438610 3.4:-94358184 MS.gene073020:CDS
TTGAAAGCTCAACCACAAAT+GGG 0.439484 3.4:-94355715 MS.gene073020:CDS
GGCAAGTAGTCTTAGCTTGA+GGG 0.446589 3.4:-94355384 MS.gene073020:CDS
TCATTCAGGTTGCTTGGCGC+CGG 0.447565 3.4:-94355424 MS.gene073020:CDS
TATTGCTTGTTCATCAATGA+AGG 0.447994 3.4:+94355352 None:intergenic
GTACCTCTATTGTTTGTGGT+GGG 0.450848 3.4:-94356844 MS.gene073020:CDS
CTTCCGAAAATCCTTGAACT+TGG 0.453966 3.4:+94358201 None:intergenic
TGAACAAGCAATATATCAAA+TGG 0.454763 3.4:-94355342 MS.gene073020:CDS
TGTTGTCACAAAGACGGCTT+GGG 0.456380 3.4:-94357293 MS.gene073020:CDS
GCGAATACTACTTCTGTGTT+TGG 0.457100 3.4:-94356960 MS.gene073020:CDS
ACTCATAGCTATCTTAGGTC+TGG 0.458025 3.4:-94356595 MS.gene073020:CDS
TCAGGCTCTACCGAGAAATC+TGG 0.461654 3.4:+94355152 None:intergenic
ACACAAGTAAAACAGAATCT+AGG 0.463470 3.4:-94355272 MS.gene073020:CDS
AGCGACGTGACACGGAAGAA+TGG 0.467271 3.4:-94356349 MS.gene073020:CDS
AACTCTATTACCTTAAAGCC+TGG 0.468634 3.4:-94355674 MS.gene073020:CDS
TCCAATGGTAAGAGTAGAAA+CGG 0.470184 3.4:+94355465 None:intergenic
AGAAGTACCTCTATTGTTTG+TGG 0.471939 3.4:-94356848 MS.gene073020:CDS
TAAAAGATTGTAAGCAGCTC+CGG 0.475216 3.4:+94357270 None:intergenic
TCAAGAATTCTCTTCTTCCA+TGG 0.476790 3.4:+94358462 None:intergenic
GTCACAAAGACGGCTTGGGC+CGG 0.477701 3.4:-94357289 MS.gene073020:CDS
CCTGCATGTTGCCGATTAAG+TGG 0.477978 3.4:+94356562 None:intergenic
TACCTCTATTGTTTGTGGTG+GGG 0.478499 3.4:-94356843 MS.gene073020:CDS
GGTCTAAGCAAAGGTGGCGT+TGG 0.478733 3.4:+94356192 None:intergenic
TTGCTGCAAACACAAGGAAA+GGG 0.481476 3.4:-94355226 MS.gene073020:CDS
TCCGTTTCTACTCTTACCAT+TGG 0.485455 3.4:-94355466 MS.gene073020:CDS
CACAGTAATAGATTGCAAAT+AGG 0.485982 3.4:+94356394 None:intergenic
TATCTTTCTGGAATGGAAAA+GGG 0.486484 3.4:-94358427 MS.gene073020:CDS
GTTTCTACTCTTACCATTGG+AGG 0.488194 3.4:-94355463 MS.gene073020:CDS
AATCAGTACAAGAGCATTGT+TGG 0.488772 3.4:+94357387 None:intergenic
ACTCTTACCATTGGAGGACG+TGG 0.489454 3.4:-94355457 MS.gene073020:CDS
AGTACCTCTATTGTTTGTGG+TGG 0.491884 3.4:-94356845 MS.gene073020:CDS
TGAATCTTGTAAACTGACAT+TGG 0.495117 3.4:+94358600 None:intergenic
GTGAACTTGTCATGGATCCT+AGG 0.499256 3.4:-94358176 MS.gene073020:CDS
TCTCAGATAGTTAAAGCTAC+TGG 0.501867 3.4:-94357316 MS.gene073020:CDS
GGTATTTGTTGTCAATTGAA+AGG 0.506989 3.4:-94357091 MS.gene073020:CDS
ACACGCTCTCTCAGAAATTG+TGG 0.507700 3.4:+94356308 None:intergenic
AAGAAGAGAATTCTTGATCC+AGG 0.518081 3.4:-94358456 MS.gene073020:CDS
CACGCTCTCTCAGAAATTGT+GGG 0.520616 3.4:+94356309 None:intergenic
ATATCTCTACGAAGGTCTGT+AGG 0.525689 3.4:+94356215 None:intergenic
ACTTGTACTGAACAAATCTT+CGG 0.526962 3.4:+94356285 None:intergenic
TGATGCAATATGCGAGCGAT+TGG 0.529832 3.4:-94355822 MS.gene073020:CDS
CAGAAAATTCTTAATCCGGA+AGG 0.532663 3.4:-94358579 MS.gene073020:CDS
GAAGTGATATCTTTCTGGAA+TGG 0.535245 3.4:-94358434 MS.gene073020:CDS
GACTACAAGCACATTTGTGT+GGG 0.537408 3.4:-94356634 MS.gene073020:CDS
CATTGTTGGTATGATCATCA+TGG 0.538295 3.4:+94357401 None:intergenic
ATCTTCTGCTCTAAGTTCAA+AGG 0.541160 3.4:+94355547 None:intergenic
GAAGATTTGTTCAGTACAAG+TGG 0.543042 3.4:-94356283 MS.gene073020:CDS
TGGCAAGTAGTCTTAGCTTG+AGG 0.544113 3.4:-94355385 MS.gene073020:CDS
CGATGGTGATCGCGTGAAGT+GGG 0.546005 3.4:-94356982 MS.gene073020:CDS
GCGGAGAAGAGTTACTTGCT+TGG 0.546677 3.4:-94355643 MS.gene073020:CDS
TTAGTTGATATTGCCACAGA+TGG 0.547059 3.4:+94358348 None:intergenic
GTGTTGTCACAAAGACGGCT+TGG 0.550466 3.4:-94357294 MS.gene073020:CDS
ATCTGGGGACATATTGAAGC+AGG 0.554038 3.4:+94357362 None:intergenic
CAAGATTTGCTGCAAACACA+AGG 0.555546 3.4:-94355232 MS.gene073020:CDS
TTTGCTGCAAACACAAGGAA+AGG 0.556128 3.4:-94355227 MS.gene073020:CDS
GTGATAGTATGCAAGAACAT+AGG 0.556281 3.4:+94358400 None:intergenic
CCACTTAATCGGCAACATGC+AGG 0.556710 3.4:-94356562 MS.gene073020:intron
TGATCTAGTACCTGGGGAAG+TGG 0.557865 3.4:+94358096 None:intergenic
TGCGAGACGGTATTTGAGAT+CGG 0.559779 3.4:-94358148 MS.gene073020:CDS
AGCCCCACCACAAACAATAG+AGG 0.561895 3.4:+94356841 None:intergenic
ACGATGGTGATCGCGTGAAG+TGG 0.566242 3.4:-94356983 MS.gene073020:CDS
GTATCATCCTTGAGTACTCA+AGG 0.567469 3.4:-94355800 MS.gene073020:CDS
CCTATACTTGTAGGTCTTAG+GGG 0.569577 3.4:-94357120 MS.gene073020:intron
TAATAAGAATTCATCATGCA+TGG 0.572982 3.4:-94358328 MS.gene073020:CDS
TAGTTAAGAATACATTTCAC+AGG 0.574590 3.4:+94357026 None:intergenic
GGTGGGGCTTGCAGAACTTG+AGG 0.575532 3.4:-94356827 MS.gene073020:intron
TATCTCTACGAAGGTCTGTA+GGG 0.575838 3.4:+94356216 None:intergenic
CTCTTACCATTGGAGGACGT+GGG 0.581384 3.4:-94355456 MS.gene073020:CDS
ATGTGCTTGTAGTCAAACTC+TGG 0.582380 3.4:+94356643 None:intergenic
TGACTACAAGCACATTTGTG+TGG 0.585890 3.4:-94356635 MS.gene073020:CDS
CTGCATGTTGCCGATTAAGT+GGG 0.588376 3.4:+94356563 None:intergenic
GAGGCTCAAGCGACGTGACA+CGG 0.589681 3.4:-94356357 MS.gene073020:CDS
TCCAAGAAAATCATGAACCA+TGG 0.593155 3.4:-94358479 MS.gene073020:CDS
GGCACATACATTGTCAGAGA+AGG 0.595209 3.4:-94355779 MS.gene073020:CDS
CCGGTTCAAGAAGAGAGCAT+TGG 0.595460 3.4:-94355405 MS.gene073020:CDS
TGCTGCAAACACAAGGAAAG+GGG 0.595619 3.4:-94355225 MS.gene073020:CDS
ATTGTTGGTATGATCATCAT+GGG 0.596867 3.4:+94357402 None:intergenic
AAGCAGCCCACGTCCTCCAA+TGG 0.597699 3.4:+94355450 None:intergenic
TCTTCTCCGCAGAAATCACC+AGG 0.602920 3.4:+94355656 None:intergenic
GTACTTCTCTATAAACATAG+AGG 0.603097 3.4:+94356863 None:intergenic
TTACTGTGAGGCTTGAAGAG+TGG 0.603544 3.4:-94356379 MS.gene073020:CDS
GAAAGGGGTTCAGAAGATCA+AGG 0.608216 3.4:-94355210 MS.gene073020:CDS
TGAAAGCTCAACCACAAATG+GGG 0.609916 3.4:-94355714 MS.gene073020:CDS
CCTTGAACTTGGTGACACAA+AGG 0.610919 3.4:+94358212 None:intergenic
ATATCAAATGGAGGAACATG+AGG 0.611454 3.4:-94355330 MS.gene073020:CDS
AGGAACATACACGTCGAACA+AGG 0.613969 3.4:+94356171 None:intergenic
CGGAAGAATGGATGAAACAT+CGG 0.618871 3.4:-94356337 MS.gene073020:CDS
CTGTGAGGCTTGAAGAGTGG+AGG 0.618962 3.4:-94356376 MS.gene073020:CDS
TTAAAGCCTGGTGATTTCTG+CGG 0.622718 3.4:-94355662 MS.gene073020:CDS
GTATGTGCCTTGAGTACTCA+AGG 0.624117 3.4:+94355793 None:intergenic
TACTGGTGTTGTCACAAAGA+CGG 0.626127 3.4:-94357299 MS.gene073020:CDS
TACAAGTGGCTTGCAACTCG+AGG 0.626694 3.4:-94356269 MS.gene073020:CDS
GTCGAACAAGGTCTAAGCAA+AGG 0.636450 3.4:+94356183 None:intergenic
TACCGTCTCGCAATCAACCT+AGG 0.642860 3.4:+94358159 None:intergenic
TATGCTGTAACTTCTTGCTG+TGG 0.643891 3.4:+94355492 None:intergenic
ATTTGCAATCTATTACTGTG+AGG 0.650720 3.4:-94356391 MS.gene073020:CDS
CTCTACGAAGGTCTGTAGGG+AGG 0.651762 3.4:+94356219 None:intergenic
ACAAGCAATATATCAAATGG+AGG 0.655329 3.4:-94355339 MS.gene073020:CDS
GAACAAGGTCTAAGCAAAGG+TGG 0.655527 3.4:+94356186 None:intergenic
GGCGTTGGATATCTCTACGA+AGG 0.660388 3.4:+94356207 None:intergenic
GAAAGCTCAACCACAAATGG+GGG 0.663599 3.4:-94355713 MS.gene073020:CDS
ATCCTAGGTTGATTGCGAGA+CGG 0.665070 3.4:-94358161 MS.gene073020:CDS
GATTGCAGTACTATAAACGA+TGG 0.665132 3.4:-94356999 MS.gene073020:CDS
TGTAGGTCTTAGGGGCATCG+TGG 0.695940 3.4:-94357112 MS.gene073020:intron
GATGAAGAAACAATCCTGAG+AGG 0.719041 3.4:-94356242 MS.gene073020:CDS
TGTTTGAATTCAACAAACTG+CGG 0.754766 3.4:+94355297 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTGATATTATTTACATAT+AGG - chr3.4:94355833-94355852 MS.gene073020:CDS 10.0%
!! ACATTGTAAATAAAATATCT+AGG + chr3.4:94356737-94356756 None:intergenic 15.0%
!! ATAAATCAAAAACAAATGAA+TGG - chr3.4:94356139-94356158 MS.gene073020:intron 15.0%
!! CAAAATCTTGTATTATATAT+TGG + chr3.4:94356068-94356087 None:intergenic 15.0%
!! TATTGTCTCAAAAAAAAAAA+GGG + chr3.4:94356044-94356063 None:intergenic 15.0%
!! TTATTGTCTCAAAAAAAAAA+AGG + chr3.4:94356045-94356064 None:intergenic 15.0%
!!! CTAGCTTTAAATTATAAAAA+AGG + chr3.4:94356696-94356715 None:intergenic 15.0%
!!! TTTTTTCTTGTTCTAATTAA+AGG - chr3.4:94355981-94356000 MS.gene073020:intron 15.0%
!! AAAAAAAATCCTATACTTGT+AGG - chr3.4:94356760-94356779 MS.gene073020:intron 20.0%
!! ATTGAGAAAGAAAAAAAACA+AGG + chr3.4:94357110-94357129 None:intergenic 20.0%
!! TTGAGAAAGAAAAAAAACAA+GGG + chr3.4:94357109-94357128 None:intergenic 20.0%
!!! TAGTTGTTTTAAAAACTTAC+AGG - chr3.4:94355233-94355252 MS.gene073020:CDS 20.0%
! AAATGTGCATTGTTTATCAA+TGG - chr3.4:94357373-94357392 MS.gene073020:CDS 25.0%
! ACCATATAACATCTCTTTAA+GGG + chr3.4:94356399-94356418 None:intergenic 25.0%
! ACTATTATAGTTCAAATGCA+AGG + chr3.4:94357960-94357979 None:intergenic 25.0%
! ACTGAACAAAGATTAATTGT+TGG + chr3.4:94357745-94357764 None:intergenic 25.0%
! ATAGATAAGTTACGTAACAT+TGG + chr3.4:94356020-94356039 None:intergenic 25.0%
! ATGAATGGAATAGTTAGAAA+TGG - chr3.4:94356154-94356173 MS.gene073020:intron 25.0%
! CATCATAAAATTTACTCAGA+GGG + chr3.4:94355951-94355970 None:intergenic 25.0%
! CTGAACAAAGATTAATTGTT+GGG + chr3.4:94357744-94357763 None:intergenic 25.0%
! GAAAAATCATATACAATCTG+GGG + chr3.4:94356545-94356564 None:intergenic 25.0%
! GAAATGTATTCTTAACTACT+TGG - chr3.4:94356868-94356887 MS.gene073020:CDS 25.0%
! GATTCAGAAAATTCTTAATC+CGG - chr3.4:94355306-94355325 MS.gene073020:CDS 25.0%
! GGAAAAATCATATACAATCT+GGG + chr3.4:94356546-94356565 None:intergenic 25.0%
! TAAGAACTGAAAATACACAA+AGG + chr3.4:94357223-94357242 None:intergenic 25.0%
! TAATAAGAATTCATCATGCA+TGG - chr3.4:94355561-94355580 MS.gene073020:CDS 25.0%
! TACCATATAACATCTCTTTA+AGG + chr3.4:94356400-94356419 None:intergenic 25.0%
! TAGTTAAGAATACATTTCAC+AGG + chr3.4:94356866-94356885 None:intergenic 25.0%
! TATTCTATCAAAGTCATGTT+TGG + chr3.4:94357921-94357940 None:intergenic 25.0%
! TCAAAAATGAGAAACTAGTA+AGG - chr3.4:94355149-94355168 MS.gene073020:CDS 25.0%
! TCATCATAAAATTTACTCAG+AGG + chr3.4:94355952-94355971 None:intergenic 25.0%
! TGAACAAGCAATATATCAAA+TGG - chr3.4:94358547-94358566 MS.gene073020:CDS 25.0%
! TGGAAAAATCATATACAATC+TGG + chr3.4:94356547-94356566 None:intergenic 25.0%
! TTAACTATCTGAGAACTTAA+TGG + chr3.4:94356567-94356586 None:intergenic 25.0%
!! ACCTTAAACTTTTCAAAAGT+TGG + chr3.4:94355388-94355407 None:intergenic 25.0%
!! GTTTTCAACTATGGAATTTT+TGG - chr3.4:94356977-94356996 MS.gene073020:CDS 25.0%
!! TGTTTAGTGTGTCTATTTTA+TGG + chr3.4:94356186-94356205 None:intergenic 25.0%
!! TTGTGTATTTTCAGTTCTTA+TGG - chr3.4:94357223-94357242 MS.gene073020:intron 25.0%
!!! ATGGTTACTGATTTGAATTT+AGG - chr3.4:94355580-94355599 MS.gene073020:CDS 25.0%
!!! TCCAACTTTTGAAAAGTTTA+AGG - chr3.4:94355384-94355403 MS.gene073020:CDS 25.0%
AACAAAGATTAATTGTTGGG+AGG + chr3.4:94357741-94357760 None:intergenic 30.0%
AAGATTATGCTTTCCATCAA+TGG + chr3.4:94355263-94355282 None:intergenic 30.0%
AATCTTATGTTATCAGTCAG+TGG - chr3.4:94356107-94356126 MS.gene073020:intron 30.0%
ACAAGCAATATATCAAATGG+AGG - chr3.4:94358550-94358569 MS.gene073020:CDS 30.0%
ACACAAGTAAAACAGAATCT+AGG - chr3.4:94358617-94358636 MS.gene073020:CDS 30.0%
ACTTGTACTGAACAAATCTT+CGG + chr3.4:94357607-94357626 None:intergenic 30.0%
ATCATCCATTTGTGAGAAAA+AGG + chr3.4:94358039-94358058 None:intergenic 30.0%
ATTGTTGGTATGATCATCAT+GGG + chr3.4:94356490-94356509 None:intergenic 30.0%
ATTTGCAATCTATTACTGTG+AGG - chr3.4:94357498-94357517 MS.gene073020:intron 30.0%
CAATACAAAACCAAGCAAAT+AGG + chr3.4:94356362-94356381 None:intergenic 30.0%
CACAGTAATAGATTGCAAAT+AGG + chr3.4:94357498-94357517 None:intergenic 30.0%
CACTAAACACAATACAAATG+CGG - chr3.4:94356266-94356285 MS.gene073020:CDS 30.0%
GAGTTATGTTTGAGAACTTA+TGG + chr3.4:94357835-94357854 None:intergenic 30.0%
GATGGTAGATAGAAAAACAA+TGG + chr3.4:94355526-94355545 None:intergenic 30.0%
GTACTTCTCTATAAACATAG+AGG + chr3.4:94357029-94357048 None:intergenic 30.0%
TATTGCTTGTTCATCAATGA+AGG + chr3.4:94358540-94358559 None:intergenic 30.0%
TCATCCATTTGTGAGAAAAA+GGG + chr3.4:94358038-94358057 None:intergenic 30.0%
TCCCTTAAAGAGATGTTATA+TGG - chr3.4:94356395-94356414 MS.gene073020:CDS 30.0%
TGAACATGGTCATAAAGTTT+AGG - chr3.4:94355650-94355669 MS.gene073020:CDS 30.0%
TGAATCTTGTAAACTGACAT+TGG + chr3.4:94355292-94355311 None:intergenic 30.0%
TGTTTGAATTCAACAAACTG+CGG + chr3.4:94358595-94358614 None:intergenic 30.0%
TTAACTGTTCTTGTAGAAGA+AGG + chr3.4:94358302-94358321 None:intergenic 30.0%
! AAGTTGCATTGACAATTGAA+AGG + chr3.4:94355199-94355218 None:intergenic 30.0%
! AGTAGCAAAGTTTTCAACTA+TGG - chr3.4:94356968-94356987 MS.gene073020:CDS 30.0%
! AGTTGCATTGACAATTGAAA+GGG + chr3.4:94355198-94355217 None:intergenic 30.0%
! GAATTGTTGTCACATGTTTT+CGG - chr3.4:94355602-94355621 MS.gene073020:CDS 30.0%
! TAGATTCTGTTTTACTTGTG+TGG + chr3.4:94358618-94358637 None:intergenic 30.0%
!! AGAACTTGAGGTTTGATTTT+AGG - chr3.4:94357074-94357093 MS.gene073020:CDS 30.0%
!! AGATGCTTTTTATCATCAGA+GGG - chr3.4:94358147-94358166 MS.gene073020:CDS 30.0%
!! ATATCTTTCTGGAATGGAAA+AGG - chr3.4:94355461-94355480 MS.gene073020:CDS 30.0%
!! GGTATTTGTTGTCAATTGAA+AGG - chr3.4:94356798-94356817 MS.gene073020:intron 30.0%
!! TAATGCTTGCTTTTCTTTGT+TGG - chr3.4:94356424-94356443 MS.gene073020:intron 30.0%
!! TATCTTTCTGGAATGGAAAA+GGG - chr3.4:94355462-94355481 MS.gene073020:CDS 30.0%
!! TCTGATGATAAAAAGCATCT+CGG + chr3.4:94358147-94358166 None:intergenic 30.0%
!! TTGAAAACTTTGCTACTTTC+AGG + chr3.4:94356965-94356984 None:intergenic 30.0%
!!! ATTTTTTGAGCCTATTTGCT+TGG - chr3.4:94356349-94356368 MS.gene073020:CDS 30.0%
AACTCTATTACCTTAAAGCC+TGG - chr3.4:94358215-94358234 MS.gene073020:CDS 35.0%
AAGAAGAGAATTCTTGATCC+AGG - chr3.4:94355433-94355452 MS.gene073020:CDS 35.0%
AGAAAAAGGGAACCTGTAAT+TGG + chr3.4:94358025-94358044 None:intergenic 35.0%
ATATCAAATGGAGGAACATG+AGG - chr3.4:94358559-94358578 MS.gene073020:CDS 35.0%
ATCCTATACTTGTAGGTCTT+AGG - chr3.4:94356767-94356786 MS.gene073020:intron 35.0%
CAGAAAATTCTTAATCCGGA+AGG - chr3.4:94355310-94355329 MS.gene073020:CDS 35.0%
CATTGTTGGTATGATCATCA+TGG + chr3.4:94356491-94356510 None:intergenic 35.0%
CTCAATATCTATAGCCTACA+TGG + chr3.4:94357418-94357437 None:intergenic 35.0%
GATTGCAGTACTATAAACGA+TGG - chr3.4:94356890-94356909 MS.gene073020:CDS 35.0%
GCAATACTCATAGCTATCTT+AGG - chr3.4:94357289-94357308 MS.gene073020:CDS 35.0%
GTGATAGTATGCAAGAACAT+AGG + chr3.4:94355492-94355511 None:intergenic 35.0%
TAAAAGATTGTAAGCAGCTC+CGG + chr3.4:94356622-94356641 None:intergenic 35.0%
TCAAGAATTCTCTTCTTCCA+TGG + chr3.4:94355430-94355449 None:intergenic 35.0%
TCCAAGAAAATCATGAACCA+TGG - chr3.4:94355410-94355429 MS.gene073020:CDS 35.0%
TCCAATGGTAAGAGTAGAAA+CGG + chr3.4:94358427-94358446 None:intergenic 35.0%
TCCTATACTTGTAGGTCTTA+GGG - chr3.4:94356768-94356787 MS.gene073020:intron 35.0%
TCTCAGATAGTTAAAGCTAC+TGG - chr3.4:94356573-94356592 MS.gene073020:CDS 35.0%
TGACTTTCTCTACCAATTAC+AGG - chr3.4:94358010-94358029 MS.gene073020:intron 35.0%
TTGAAAGCTCAACCACAAAT+GGG - chr3.4:94358174-94358193 MS.gene073020:CDS 35.0%
TTTGTTGGCAGATTGTGATT+TGG - chr3.4:94356439-94356458 MS.gene073020:intron 35.0%
! AAGTTCAAGGATTTTCGGAA+GGG - chr3.4:94355690-94355709 MS.gene073020:CDS 35.0%
! ATCTTCTGCTCTAAGTTCAA+AGG + chr3.4:94358345-94358364 None:intergenic 35.0%
! ATGCTACTAATTTTGCCTTC+CGG + chr3.4:94355328-94355347 None:intergenic 35.0%
! GAAGATTTGTTCAGTACAAG+TGG - chr3.4:94357606-94357625 MS.gene073020:intron 35.0%
! GAAGTGATATCTTTCTGGAA+TGG - chr3.4:94355455-94355474 MS.gene073020:CDS 35.0%
! GTTTTTCTATCTACCATCTG+TGG - chr3.4:94355528-94355547 MS.gene073020:CDS 35.0%
! TCACCAAGTTCAAGGATTTT+CGG - chr3.4:94355685-94355704 MS.gene073020:CDS 35.0%
! TCCATGGTTCATGATTTTCT+TGG + chr3.4:94355414-94355433 None:intergenic 35.0%
! TGTTTTCTATCTGCTGAACA+TGG - chr3.4:94355636-94355655 MS.gene073020:CDS 35.0%
! TTAGTTGATATTGCCACAGA+TGG + chr3.4:94355544-94355563 None:intergenic 35.0%
!! AATCAGTACAAGAGCATTGT+TGG + chr3.4:94356505-94356524 None:intergenic 35.0%
!! AGAAGTACCTCTATTGTTTG+TGG - chr3.4:94357041-94357060 MS.gene073020:CDS 35.0%
!! ATAAAAAGCATCTCGGTAAC+TGG + chr3.4:94358140-94358159 None:intergenic 35.0%
!! GAATCTAGGTGTCACTATAT+TGG - chr3.4:94358631-94358650 MS.gene073020:CDS 35.0%
!! GAGATGCTTTTTATCATCAG+AGG - chr3.4:94358146-94358165 MS.gene073020:CDS 35.0%
!! GGAGAGAACATTATTTTGCA+CGG + chr3.4:94357008-94357027 None:intergenic 35.0%
!!! GTTTTGTTTGCCCACTTAAT+CGG - chr3.4:94357316-94357335 MS.gene073020:CDS 35.0%
ACTCATAGCTATCTTAGGTC+TGG - chr3.4:94357294-94357313 MS.gene073020:CDS 40.0%
ACTTACAGGTTCTCCATTGA+TGG - chr3.4:94355247-94355266 MS.gene073020:CDS 40.0%
AGTACCTCTATTGTTTGTGG+TGG - chr3.4:94357044-94357063 MS.gene073020:CDS 40.0%
ATATCTCTACGAAGGTCTGT+AGG + chr3.4:94357677-94357696 None:intergenic 40.0%
ATGTGCTTGTAGTCAAACTC+TGG + chr3.4:94357249-94357268 None:intergenic 40.0%
CCTATACTTGTAGGTCTTAG+GGG - chr3.4:94356769-94356788 MS.gene073020:intron 40.0%
CGGAAGAATGGATGAAACAT+CGG - chr3.4:94357552-94357571 MS.gene073020:intron 40.0%
CTTCCGAAAATCCTTGAACT+TGG + chr3.4:94355691-94355710 None:intergenic 40.0%
CTTGAAAGCTCAACCACAAA+TGG - chr3.4:94358173-94358192 MS.gene073020:CDS 40.0%
GACTACAAGCACATTTGTGT+GGG - chr3.4:94357255-94357274 MS.gene073020:CDS 40.0%
GATGAAGAAACAATCCTGAG+AGG - chr3.4:94357647-94357666 MS.gene073020:intron 40.0%
GCGAATACTACTTCTGTGTT+TGG - chr3.4:94356929-94356948 MS.gene073020:CDS 40.0%
GCTTAGAGACAACTTCATAG+TGG - chr3.4:94355885-94355904 MS.gene073020:intron 40.0%
GTACCTCTATTGTTTGTGGT+GGG - chr3.4:94357045-94357064 MS.gene073020:CDS 40.0%
GTATCATCCTTGAGTACTCA+AGG - chr3.4:94358089-94358108 MS.gene073020:intron 40.0%
GTTTCTACTCTTACCATTGG+AGG - chr3.4:94358426-94358445 MS.gene073020:CDS 40.0%
TACCTCTATTGTTTGTGGTG+GGG - chr3.4:94357046-94357065 MS.gene073020:CDS 40.0%
TATCTCTACGAAGGTCTGTA+GGG + chr3.4:94357676-94357695 None:intergenic 40.0%
TATGCTGTAACTTCTTGCTG+TGG + chr3.4:94358400-94358419 None:intergenic 40.0%
TCAAGAACAAGCTTCCATGT+AGG - chr3.4:94357401-94357420 MS.gene073020:CDS 40.0%
TCCAGAAAGATATCACTTCC+TGG + chr3.4:94355454-94355473 None:intergenic 40.0%
TCCAGGAAGTGATATCTTTC+TGG - chr3.4:94355450-94355469 MS.gene073020:CDS 40.0%
TCCGTTTCTACTCTTACCAT+TGG - chr3.4:94358423-94358442 MS.gene073020:CDS 40.0%
TGAAAGCTCAACCACAAATG+GGG - chr3.4:94358175-94358194 MS.gene073020:CDS 40.0%
TGACTACAAGCACATTTGTG+TGG - chr3.4:94357254-94357273 MS.gene073020:CDS 40.0%
TGGTAGAGAAAGTCATGACA+TGG + chr3.4:94358005-94358024 None:intergenic 40.0%
TTAAAGCCTGGTGATTTCTG+CGG - chr3.4:94358227-94358246 MS.gene073020:CDS 40.0%
TTGCTGCAAACACAAGGAAA+GGG - chr3.4:94358663-94358682 MS.gene073020:intron 40.0%
TTTGCTGCAAACACAAGGAA+AGG - chr3.4:94358662-94358681 MS.gene073020:intron 40.0%
! AGTTCAAGGATTTTCGGAAG+GGG - chr3.4:94355691-94355710 MS.gene073020:CDS 40.0%
! CAAGTTCAAGGATTTTCGGA+AGG - chr3.4:94355689-94355708 MS.gene073020:CDS 40.0%
! CAGCTACTTACGACTTGTTT+CGG - chr3.4:94357781-94357800 MS.gene073020:intron 40.0%
! GGTTCCCTTTTTCTCACAAA+TGG - chr3.4:94358031-94358050 MS.gene073020:intron 40.0%
! TCTTCAGGCTTTTGCAACTT+GGG + chr3.4:94358716-94358735 None:intergenic 40.0%
!! CAAGATTTGCTGCAAACACA+AGG - chr3.4:94358657-94358676 MS.gene073020:intron 40.0%
!! CTTGTTTCATTCAGGTTGCT+TGG - chr3.4:94358459-94358478 MS.gene073020:CDS 40.0%
!! GGCAAGTTGAGAGTAGATTT+TGG + chr3.4:94358281-94358300 None:intergenic 40.0%
!! TACTGGTGTTGTCACAAAGA+CGG - chr3.4:94356590-94356609 MS.gene073020:CDS 40.0%
ACACGCTCTCTCAGAAATTG+TGG + chr3.4:94357584-94357603 None:intergenic 45.0%
AGGAACATACACGTCGAACA+AGG + chr3.4:94357721-94357740 None:intergenic 45.0%
AGTTGCTGATCTAGTACCTG+GGG + chr3.4:94355802-94355821 None:intergenic 45.0%
ATCTGGGGACATATTGAAGC+AGG + chr3.4:94356530-94356549 None:intergenic 45.0%
CACGCTCTCTCAGAAATTGT+GGG + chr3.4:94357583-94357602 None:intergenic 45.0%
CAGTTGCTGATCTAGTACCT+GGG + chr3.4:94355803-94355822 None:intergenic 45.0%
CCAATGCTCTCTTCTTGAAC+CGG + chr3.4:94358487-94358506 None:intergenic 45.0%
CCCCTAAGACCTACAAGTAT+AGG + chr3.4:94356772-94356791 None:intergenic 45.0%
CCTTTGTGTCACCAAGTTCA+AGG - chr3.4:94355677-94355696 MS.gene073020:CDS 45.0%
CGGAGAAGAGTTACTTGCTT+GGG - chr3.4:94358247-94358266 MS.gene073020:CDS 45.0%
GAAAGCTCAACCACAAATGG+GGG - chr3.4:94358176-94358195 MS.gene073020:CDS 45.0%
GAAAGGGGTTCAGAAGATCA+AGG - chr3.4:94358679-94358698 MS.gene073020:intron 45.0%
GAACAAGGTCTAAGCAAAGG+TGG + chr3.4:94357706-94357725 None:intergenic 45.0%
GCAGAAATCACCAGGCTTTA+AGG + chr3.4:94358228-94358247 None:intergenic 45.0%
GCAGTGCAGCAAAAAGATCT+AGG + chr3.4:94355774-94355793 None:intergenic 45.0%
GGCACATACATTGTCAGAGA+AGG - chr3.4:94358110-94358129 MS.gene073020:CDS 45.0%
GTATGTGCCTTGAGTACTCA+AGG + chr3.4:94358099-94358118 None:intergenic 45.0%
GTCGAACAAGGTCTAAGCAA+AGG + chr3.4:94357709-94357728 None:intergenic 45.0%
GTGAACTTGTCATGGATCCT+AGG - chr3.4:94355713-94355732 MS.gene073020:CDS 45.0%
TCAGTTGCTGATCTAGTACC+TGG + chr3.4:94355804-94355823 None:intergenic 45.0%
TCATGGGAGCTTCTAATTGC+TGG + chr3.4:94356474-94356493 None:intergenic 45.0%
TGATGCAATATGCGAGCGAT+TGG - chr3.4:94358067-94358086 MS.gene073020:intron 45.0%
TGCTGCAAACACAAGGAAAG+GGG - chr3.4:94358664-94358683 MS.gene073020:intron 45.0%
TGTTGTCACAAAGACGGCTT+GGG - chr3.4:94356596-94356615 MS.gene073020:CDS 45.0%
TTACTGTGAGGCTTGAAGAG+TGG - chr3.4:94357510-94357529 MS.gene073020:intron 45.0%
! CCTTGAACTTGGTGACACAA+AGG + chr3.4:94355680-94355699 None:intergenic 45.0%
! CTCTTCAGGCTTTTGCAACT+TGG + chr3.4:94358717-94358736 None:intergenic 45.0%
! CTGCATGTTGCCGATTAAGT+GGG + chr3.4:94357329-94357348 None:intergenic 45.0%
! GGCAAGTAGTCTTAGCTTGA+GGG - chr3.4:94358505-94358524 MS.gene073020:CDS 45.0%
! TGCATAAAGCTCTAGCCTAG+TGG + chr3.4:94356312-94356331 None:intergenic 45.0%
! TGCGAGACGGTATTTGAGAT+CGG - chr3.4:94355741-94355760 MS.gene073020:CDS 45.0%
! TGGCAAGTAGTCTTAGCTTG+AGG - chr3.4:94358504-94358523 MS.gene073020:CDS 45.0%
! TTGAAAGGCATGCTACTTGC+TGG - chr3.4:94356813-94356832 MS.gene073020:intron 45.0%
!! ATCCTAGGTTGATTGCGAGA+CGG - chr3.4:94355728-94355747 MS.gene073020:CDS 45.0%
ACTCTTACCATTGGAGGACG+TGG - chr3.4:94358432-94358451 MS.gene073020:CDS 50.0%
AGCCCCACCACAAACAATAG+AGG + chr3.4:94357051-94357070 None:intergenic 50.0%
CCACTTAATCGGCAACATGC+AGG - chr3.4:94357327-94357346 MS.gene073020:CDS 50.0%
CTCTTACCATTGGAGGACGT+GGG - chr3.4:94358433-94358452 MS.gene073020:CDS 50.0%
GCCTGAAGAGCCAGATTTCT+CGG - chr3.4:94358727-94358746 MS.gene073020:intron 50.0%
GCGGAGAAGAGTTACTTGCT+TGG - chr3.4:94358246-94358265 MS.gene073020:CDS 50.0%
GTGTTGTCACAAAGACGGCT+TGG - chr3.4:94356595-94356614 MS.gene073020:CDS 50.0%
TACCGTCTCGCAATCAACCT+AGG + chr3.4:94355733-94355752 None:intergenic 50.0%
TCAGGCTCTACCGAGAAATC+TGG + chr3.4:94358740-94358759 None:intergenic 50.0%
TCTTCTCCGCAGAAATCACC+AGG + chr3.4:94358236-94358255 None:intergenic 50.0%
TGATCTAGTACCTGGGGAAG+TGG + chr3.4:94355796-94355815 None:intergenic 50.0%
! CCGGTTCAAGAAGAGAGCAT+TGG - chr3.4:94358484-94358503 MS.gene073020:CDS 50.0%
! CCTGCATGTTGCCGATTAAG+TGG + chr3.4:94357330-94357349 None:intergenic 50.0%
! GGCGTTGGATATCTCTACGA+AGG + chr3.4:94357685-94357704 None:intergenic 50.0%
! GTGGGCTGCTTGTTTCATTC+AGG - chr3.4:94358451-94358470 MS.gene073020:CDS 50.0%
! TACAAGTGGCTTGCAACTCG+AGG - chr3.4:94357620-94357639 MS.gene073020:intron 50.0%
!! ACCGAGAAATCTGGCTCTTC+AGG + chr3.4:94358731-94358750 None:intergenic 50.0%
ACCACAAATGGGGGCAGAAC+TGG - chr3.4:94358185-94358204 MS.gene073020:CDS 55.0%
ACCAGTTCTGCCCCCATTTG+TGG + chr3.4:94358189-94358208 None:intergenic 55.0%
ACGATGGTGATCGCGTGAAG+TGG - chr3.4:94356906-94356925 MS.gene073020:CDS 55.0%
AGCGACGTGACACGGAAGAA+TGG - chr3.4:94357540-94357559 MS.gene073020:intron 55.0%
CCTAGTGGTCACTCGCATTC+AGG + chr3.4:94356297-94356316 None:intergenic 55.0%
CCTGAATGCGAGTGACCACT+AGG - chr3.4:94356294-94356313 MS.gene073020:CDS 55.0%
CGATGGTGATCGCGTGAAGT+GGG - chr3.4:94356907-94356926 MS.gene073020:CDS 55.0%
CGGAAGGGGTGAACTTGTCA+TGG - chr3.4:94355705-94355724 MS.gene073020:CDS 55.0%
CTCTACGAAGGTCTGTAGGG+AGG + chr3.4:94357673-94357692 None:intergenic 55.0%
CTGTGAGGCTTGAAGAGTGG+AGG - chr3.4:94357513-94357532 MS.gene073020:intron 55.0%
GGTCTAAGCAAAGGTGGCGT+TGG + chr3.4:94357700-94357719 None:intergenic 55.0%
!! TCATTCAGGTTGCTTGGCGC+CGG - chr3.4:94358465-94358484 MS.gene073020:CDS 55.0%
!! TGTAGGTCTTAGGGGCATCG+TGG - chr3.4:94356777-94356796 MS.gene073020:intron 55.0%
AAGCAGCCCACGTCCTCCAA+TGG + chr3.4:94358442-94358461 None:intergenic 60.0%
GAGGCTCAAGCGACGTGACA+CGG - chr3.4:94357532-94357551 MS.gene073020:intron 60.0%
GGTGGGGCTTGCAGAACTTG+AGG - chr3.4:94357062-94357081 MS.gene073020:CDS 60.0%
! GTCACAAAGACGGCTTGGGC+CGG - chr3.4:94356600-94356619 MS.gene073020:CDS 60.0%
GGTCTGTAGGGAGGCCTCTC+AGG + chr3.4:94357664-94357683 None:intergenic 65.0%
! TGCTGCACTGCCACTTCCCC+AGG - chr3.4:94355783-94355802 MS.gene073020:CDS 65.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 94355142 94358769 94355142 ID=MS.gene073020
chr3.4 mRNA 94355142 94358769 94355142 ID=MS.gene073020.t1;Parent=MS.gene073020
chr3.4 exon 94358741 94358769 94358741 ID=MS.gene073020.t1.exon1;Parent=MS.gene073020.t1
chr3.4 CDS 94358741 94358769 94358741 ID=cds.MS.gene073020.t1;Parent=MS.gene073020.t1
chr3.4 exon 94358107 94358656 94358107 ID=MS.gene073020.t1.exon2;Parent=MS.gene073020.t1
chr3.4 CDS 94358107 94358656 94358107 ID=cds.MS.gene073020.t1;Parent=MS.gene073020.t1
chr3.4 exon 94357249 94357461 94357249 ID=MS.gene073020.t1.exon3;Parent=MS.gene073020.t1
chr3.4 CDS 94357249 94357461 94357249 ID=cds.MS.gene073020.t1;Parent=MS.gene073020.t1
chr3.4 exon 94356828 94357129 94356828 ID=MS.gene073020.t1.exon4;Parent=MS.gene073020.t1
chr3.4 CDS 94356828 94357129 94356828 ID=cds.MS.gene073020.t1;Parent=MS.gene073020.t1
chr3.4 exon 94356563 94356674 94356563 ID=MS.gene073020.t1.exon5;Parent=MS.gene073020.t1
chr3.4 CDS 94356563 94356674 94356563 ID=cds.MS.gene073020.t1;Parent=MS.gene073020.t1
chr3.4 exon 94356181 94356417 94356181 ID=MS.gene073020.t1.exon6;Parent=MS.gene073020.t1
chr3.4 CDS 94356181 94356417 94356181 ID=cds.MS.gene073020.t1;Parent=MS.gene073020.t1
chr3.4 exon 94355142 94355879 94355142 ID=MS.gene073020.t1.exon7;Parent=MS.gene073020.t1
chr3.4 CDS 94355142 94355879 94355142 ID=cds.MS.gene073020.t1;Parent=MS.gene073020.t1
Gene Sequence

>MS.gene073020

ATGGAGCTCAAAAATGAGAAACTAGTAAGGTTATTTCTCACTCTCTCTCTTTTCCCTTTCAATTGTCAATGCAACTTTGCACTGATTTGATTAGTTGTTTTAAAAACTTACAGGTTCTCCATTGATGGAAAGCATAATCTTGAGAAACCAATGTCAGTTTACAAGATTCAGAAAATTCTTAATCCGGAAGGCAAAATTAGTAGCATTGTTGATACTGATAAGAATAGAATGAATATCAAATTTCCAACTTTTGAAAAGTTTAAGGTTTTCCAAGAAAATCATGAACCATGGAAGAAGAGAATTCTTGATCCAGGAAGTGATATCTTTCTGGAATGGAAAAGGGCTTTCCTATGTTCTTGCATACTATCACTATTTGTTGATCCATTGTTTTTCTATCTACCATCTGTGGCAATATCAACTAATAAGAATTCATCATGCATGGTTACTGATTTGAATTTAGGAATTGTTGTCACATGTTTTCGGACATTTGCTGATGTTTTCTATCTGCTGAACATGGTCATAAAGTTTAGGACAGCCTTTGTGTCACCAAGTTCAAGGATTTTCGGAAGGGGTGAACTTGTCATGGATCCTAGGTTGATTGCGAGACGGTATTTGAGATCGGAGTTTTTCCTAGATCTTTTTGCTGCACTGCCACTTCCCCAGGTACTAGATCAGCAACTGAAGATACTGTTATTGATATTATTTACATATAGGAAATTTAAAACTATCAATATTTTGTTTATGCTTAGAGACAACTTCATAGTGGCATGAATTGTGAAACAGTTTAAGTTTTAGTAGTTTTAATACCCTCTGAGTAAATTTTATGATGAAATAGATTTTTTTTTCTTGTTCTAATTAAAGGTATTAATAGAATGCCAATGTTACGTAACTTATCTATTCCCTTTTTTTTTTTGAGACAATAACCAATATATAATACAAGATTTTGTAGTAATATTTTTTTAACAAATCTTATGTTATCAGTCAGTGGCTACAAATTATAAATCAAAAACAAATGAATGGAATAGTTAGAAATGGAAGTGACCATAAAATAGACACACTAAACACAATCTTATCTTATTTTAAATTGAAACGAATATTATACAATGAATGACATAAAATAGACACACTAAACACAATACAAATGCGGATAAACCTGAATGCGAGTGACCACTAGGCTAGAGCTTTATGCAACAAGCAATTCATACACATTTTTTGAGCCTATTTGCTTGGTTTTGTATTGTCTTTATATTTTGTCCCTTAAAGAGATGTTATATGGTATTGTTAATGCTTGCTTTTCTTTGTTGGCAGATTGTGATTTGGTTTATTATGCCAGCAATTAGAAGCTCCCATGATGATCATACCAACAATGCTCTTGTACTGATTGTCCTGCTTCAATATGTCCCCAGATTGTATATGATTTTTCCATTAAGTTCTCAGATAGTTAAAGCTACTGGTGTTGTCACAAAGACGGCTTGGGCCGGAGCTGCTTACAATCTTTTACTTTACATGTTAGCAAGTCATGTATGTTGAGTTTTCTTCAATCACAAGTTTCCTTTTTTATAATTTAAAGCTAGTTCTCATCTCTCAGCATTCCTAGATATTTTATTTACAATGTTAGAAAAAAAATCCTATACTTGTAGGTCTTAGGGGCATCGTGGTATTTGTTGTCAATTGAAAGGCATGCTACTTGCTGGAAATCTGAATGCAGAAATGAAAACTTACCTGTGAAATGTATTCTTAACTACTTGGATTGCAGTACTATAAACGATGGTGATCGCGTGAAGTGGGCGAATACTACTTCTGTGTTTGGTAACTGCAATCCTGAAAGTAGCAAAGTTTTCAACTATGGAATTTTTGGAAATGCCGTGCAAAATAATGTTCTCTCCTCTATGTTTATAGAGAAGTACCTCTATTGTTTGTGGTGGGGCTTGCAGAACTTGAGGTTTGATTTTAGGATTTGTTATCCCTTGTTTTTTTTCTTTCTCAATTATCTTTCTTTAGAGATGAATACTTGACATGAAAGTTAGTTGTGCATCACATTTTTTTATTTATTCACATTCACATTTTACTAATCTCTTCCTTTGTGTATTTTCAGTTCTTATGGCCAGAGTTTGACTACAAGCACATTTGTGTGGGAAACTGCATTTGCAATACTCATAGCTATCTTAGGTCTGGTTTTGTTTGCCCACTTAATCGGCAACATGCAGGTAATTTGAATTTTCAAATCTTCAAAATGTGCATTGTTTATCAATGGTCTTGTCAAGAACAAGCTTCCATGTAGGCTATAGATATTGAGATGTTTCAATCTTATTGAAATGTTGTGTGTATATAAGCATGCTCAACTCAACGCAGACCTATTTGCAATCTATTACTGTGAGGCTTGAAGAGTGGAGGCTCAAGCGACGTGACACGGAAGAATGGATGAAACATCGGCAACTCCCACAATTTCTGAGAGAGCGTGTCCGAAGATTTGTTCAGTACAAGTGGCTTGCAACTCGAGGTGTTGATGAAGAAACAATCCTGAGAGGCCTCCCTACAGACCTTCGTAGAGATATCCAACGCCACCTTTGCTTAGACCTTGTTCGACGTGTATGTTCCTCCCAACAATTAATCTTTGTTCAGTTGATTTGTCATTTTCTCAGCTACTTACGACTTGTTTCGGAGAGCTTATGAAACAACTTATGTCATGTCCATAAGTTCTCAAACATAACTCACGAAAACAACTTATAGTTCAAAACAGTTTCTTATGCTATAAGCGATTAATTAAGTTGTTTATCCAAACATGACTTTGATAGAATAGTTGTTATAATAGTTTCCTTGCATTTGAACTATAATAGTTTATTGAAGTTTATGACACACACCATGTCATGACTTTCTCTACCAATTACAGGTTCCCTTTTTCTCACAAATGGATGATCAACTACTTGATGCAATATGCGAGCGATTGGTATCATCCTTGAGTACTCAAGGCACATACATTGTCAGAGAAGGAGATCCAGTTACCGAGATGCTTTTTATCATCAGAGGGAGACTTGAAAGCTCAACCACAAATGGGGGCAGAACTGGTTTCTTTAACTCTATTACCTTAAAGCCTGGTGATTTCTGCGGAGAAGAGTTACTTGCTTGGGCATTGCTTCCAAAATCTACTCTCAACTTGCCTTCTTCTACAAGAACAGTTAAAGCTCTTGTTGAAGTTGAAGCCTTTGAACTTAGAGCAGAAGATCTTAAATTTGTCGCAAATCAGTTTCGACGTCTCCACAGCAAGAAGTTACAGCATACATTCCGTTTCTACTCTTACCATTGGAGGACGTGGGCTGCTTGTTTCATTCAGGTTGCTTGGCGCCGGTTCAAGAAGAGAGCATTGGCAAGTAGTCTTAGCTTGAGGGAATACAAGTCCTTCATTGATGAACAAGCAATATATCAAATGGAGGAACATGAGGAAGAAGAGCACCGCAGTTTGTTGAATTCAAACACCACACAAGTAAAACAGAATCTAGGTGTCACTATATTGGCTTCAAGATTTGCTGCAAACACAAGGAAAGGGGTTCAGAAGATCAAGGATGCAGAGATGCCCAAGTTGCAAAAGCCTGAAGAGCCAGATTTCTCGGTAGAGCCTGAAGATGATTAA
Protein sequence

>MS.gene073020.t1

MELKNEKLVRFSIDGKHNLEKPMSVYKIQKILNPEGKISSIVDTDKNRMNIKFPTFEKFKVFQENHEPWKKRILDPGSDIFLEWKRAFLCSCILSLFVDPLFFYLPSVAISTNKNSSCMVTDLNLGIVVTCFRTFADVFYLLNMVIKFRTAFVSPSSRIFGRGELVMDPRLIARRYLRSEFFLDLFAALPLPQIVIWFIMPAIRSSHDDHTNNALVLIVLLQYVPRLYMIFPLSSQIVKATGVVTKTAWAGAAYNLLLYMLASHVLGASWYLLSIERHATCWKSECRNENLPVKCILNYLDCSTINDGDRVKWANTTSVFGNCNPESSKVFNYGIFGNAVQNNVLSSMFIEKYLYCLWWGLQNLSSYGQSLTTSTFVWETAFAILIAILGLVLFAHLIGNMQTYLQSITVRLEEWRLKRRDTEEWMKHRQLPQFLRERVRRFVQYKWLATRGVDEETILRGLPTDLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLVSSLSTQGTYIVREGDPVTEMLFIIRGRLESSTTNGGRTGFFNSITLKPGDFCGEELLAWALLPKSTLNLPSSTRTVKALVEVEAFELRAEDLKFVANQFRRLHSKKLQHTFRFYSYHWRTWAACFIQVAWRRFKKRALASSLSLREYKSFIDEQAIYQMEEHEEEEHRSLLNSNTTQVKQNLGVTILASRFAANTRKGVQKIKDAEMPKLQKPEEPDFSVEPEDD