Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45237.t1 | XP_003621352.1 | 99.3 | 711 | 4 | 1 | 1 | 711 | 1 | 710 | 0.00E+00 | 1429.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45237.t1 | O65718 | 76.3 | 723 | 145 | 9 | 9 | 711 | 10 | 726 | 0.0e+00 | 1081.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45237.t1 | G7L453 | 99.3 | 711 | 4 | 1 | 1 | 711 | 1 | 710 | 0.0e+00 | 1429.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049356 | MS.gene45237 | 0.860353 | 2.19E-63 | -1.69E-46 |
MS.gene049369 | MS.gene45237 | 0.856565 | 2.95E-62 | -1.69E-46 |
MS.gene049396 | MS.gene45237 | 0.811431 | 7.03E-51 | -1.69E-46 |
MS.gene050128 | MS.gene45237 | 0.858946 | 5.81E-63 | -1.69E-46 |
MS.gene051521 | MS.gene45237 | 0.80417 | 2.46E-49 | -1.69E-46 |
MS.gene052188 | MS.gene45237 | 0.836031 | 1.19E-56 | -1.69E-46 |
MS.gene052340 | MS.gene45237 | 0.805519 | 1.28E-49 | -1.69E-46 |
MS.gene05316 | MS.gene45237 | 0.866869 | 2.08E-65 | -1.69E-46 |
MS.gene053449 | MS.gene45237 | 0.839302 | 1.72E-57 | -1.69E-46 |
MS.gene053813 | MS.gene45237 | 0.818629 | 1.77E-52 | -1.69E-46 |
MS.gene053912 | MS.gene45237 | 0.826751 | 2.28E-54 | -1.69E-46 |
MS.gene056422 | MS.gene45237 | 0.873378 | 1.54E-67 | -1.69E-46 |
MS.gene056609 | MS.gene45237 | 0.812764 | 3.60E-51 | -1.69E-46 |
MS.gene057086 | MS.gene45237 | 0.804242 | 2.37E-49 | -1.69E-46 |
MS.gene057124 | MS.gene45237 | 0.802404 | 5.70E-49 | -1.69E-46 |
MS.gene05735 | MS.gene45237 | 0.836876 | 7.23E-57 | -1.69E-46 |
MS.gene057448 | MS.gene45237 | 0.857887 | 1.20E-62 | -1.69E-46 |
MS.gene057449 | MS.gene45237 | 0.869781 | 2.39E-66 | -1.69E-46 |
MS.gene057450 | MS.gene45237 | 0.855976 | 4.39E-62 | -1.69E-46 |
MS.gene057537 | MS.gene45237 | 0.980206 | 1.09E-149 | -1.69E-46 |
MS.gene057734 | MS.gene45237 | 0.802656 | 5.06E-49 | -1.69E-46 |
MS.gene057927 | MS.gene45237 | 0.862234 | 5.85E-64 | -1.69E-46 |
MS.gene058459 | MS.gene45237 | 0.851824 | 6.90E-61 | -1.69E-46 |
MS.gene05858 | MS.gene45237 | 0.81716 | 3.81E-52 | -1.69E-46 |
MS.gene058928 | MS.gene45237 | 0.827873 | 1.23E-54 | -1.69E-46 |
MS.gene059366 | MS.gene45237 | 0.859307 | 4.53E-63 | -1.69E-46 |
MS.gene059368 | MS.gene45237 | 0.811151 | 8.08E-51 | -1.69E-46 |
MS.gene059674 | MS.gene45237 | 0.806689 | 7.28E-50 | -1.69E-46 |
MS.gene059676 | MS.gene45237 | 0.820031 | 8.50E-53 | -1.69E-46 |
MS.gene059711 | MS.gene45237 | 0.830514 | 2.81E-55 | -1.69E-46 |
MS.gene059807 | MS.gene45237 | 0.852995 | 3.20E-61 | -1.69E-46 |
MS.gene05986 | MS.gene45237 | 0.832046 | 1.18E-55 | -1.69E-46 |
MS.gene059974 | MS.gene45237 | 0.803353 | 3.63E-49 | -1.69E-46 |
MS.gene060495 | MS.gene45237 | 0.808398 | 3.16E-50 | -1.69E-46 |
MS.gene060799 | MS.gene45237 | 0.813044 | 3.12E-51 | -1.69E-46 |
MS.gene060800 | MS.gene45237 | 0.810909 | 9.12E-51 | -1.69E-46 |
MS.gene060801 | MS.gene45237 | 0.803511 | 3.37E-49 | -1.69E-46 |
MS.gene060818 | MS.gene45237 | 0.832728 | 8.01E-56 | -1.69E-46 |
MS.gene060837 | MS.gene45237 | 0.829262 | 5.68E-55 | -1.69E-46 |
MS.gene061051 | MS.gene45237 | -0.857407 | 1.67E-62 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene40376 | MS.gene45237 | PPI |
MS.gene073020 | MS.gene45237 | PPI |
MS.gene014719 | MS.gene45237 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45237.t1 | MTR_7g012260 | 99.297 | 711 | 4 | 1 | 1 | 711 | 1 | 710 | 0.0 | 1457 |
MS.gene45237.t1 | MTR_8g464570 | 51.876 | 613 | 273 | 9 | 110 | 708 | 63 | 667 | 0.0 | 661 |
MS.gene45237.t1 | MTR_2g081110 | 49.353 | 618 | 285 | 11 | 106 | 708 | 59 | 663 | 0.0 | 611 |
MS.gene45237.t1 | MTR_4g130820 | 39.442 | 573 | 326 | 10 | 108 | 673 | 98 | 656 | 8.91e-131 | 404 |
MS.gene45237.t1 | MTR_2g460590 | 38.176 | 592 | 339 | 10 | 108 | 687 | 42 | 618 | 1.59e-129 | 399 |
MS.gene45237.t1 | MTR_1g028370 | 36.102 | 590 | 351 | 13 | 94 | 676 | 69 | 639 | 8.60e-129 | 398 |
MS.gene45237.t1 | MTR_3g109030 | 37.778 | 585 | 349 | 8 | 108 | 686 | 72 | 647 | 1.16e-127 | 396 |
MS.gene45237.t1 | MTR_3g091080 | 36.014 | 572 | 345 | 8 | 107 | 673 | 79 | 634 | 4.41e-125 | 389 |
MS.gene45237.t1 | MTR_7g034605 | 36.395 | 577 | 347 | 10 | 108 | 676 | 43 | 607 | 5.60e-120 | 374 |
MS.gene45237.t1 | MTR_1g064240 | 35.897 | 585 | 352 | 9 | 109 | 687 | 71 | 638 | 3.04e-119 | 373 |
MS.gene45237.t1 | MTR_4g058730 | 35.172 | 580 | 349 | 12 | 108 | 679 | 58 | 618 | 4.70e-119 | 370 |
MS.gene45237.t1 | MTR_2g094860 | 34.347 | 658 | 396 | 18 | 41 | 687 | 12 | 644 | 8.68e-118 | 369 |
MS.gene45237.t1 | MTR_3g088875 | 36.256 | 593 | 357 | 9 | 91 | 676 | 21 | 599 | 8.55e-117 | 366 |
MS.gene45237.t1 | MTR_7g117310 | 34.615 | 598 | 360 | 12 | 90 | 673 | 6 | 586 | 8.72e-111 | 350 |
MS.gene45237.t1 | MTR_7g117310 | 34.375 | 608 | 368 | 12 | 80 | 673 | 50 | 640 | 2.13e-110 | 350 |
MS.gene45237.t1 | MTR_7g117310 | 34.375 | 608 | 368 | 12 | 80 | 673 | 62 | 652 | 4.01e-110 | 350 |
MS.gene45237.t1 | MTR_8g027755 | 33.950 | 595 | 368 | 12 | 91 | 676 | 69 | 647 | 1.55e-108 | 346 |
MS.gene45237.t1 | MTR_6g477760 | 35.714 | 588 | 350 | 13 | 109 | 681 | 123 | 697 | 3.79e-100 | 323 |
MS.gene45237.t1 | MTR_6g075290 | 35.385 | 585 | 341 | 11 | 108 | 676 | 192 | 755 | 6.63e-97 | 316 |
MS.gene45237.t1 | MTR_5g007630 | 34.192 | 582 | 342 | 11 | 109 | 676 | 172 | 726 | 7.59e-96 | 313 |
MS.gene45237.t1 | MTR_6g075440 | 30.853 | 645 | 381 | 13 | 71 | 676 | 113 | 731 | 1.22e-94 | 310 |
MS.gene45237.t1 | MTR_6g075440 | 30.698 | 645 | 382 | 14 | 71 | 676 | 113 | 731 | 1.54e-94 | 310 |
MS.gene45237.t1 | MTR_6g075290 | 35.675 | 541 | 322 | 9 | 147 | 676 | 28 | 553 | 7.27e-90 | 292 |
MS.gene45237.t1 | MTR_6g075290 | 35.609 | 542 | 313 | 10 | 151 | 676 | 193 | 714 | 3.11e-89 | 295 |
MS.gene45237.t1 | MTR_6g075390 | 30.769 | 546 | 340 | 13 | 108 | 638 | 114 | 636 | 1.14e-74 | 254 |
MS.gene45237.t1 | MTR_6g075410 | 29.382 | 599 | 387 | 12 | 94 | 678 | 83 | 659 | 6.48e-72 | 247 |
MS.gene45237.t1 | MTR_6g076060 | 33.556 | 450 | 244 | 12 | 252 | 675 | 38 | 458 | 2.16e-58 | 206 |
MS.gene45237.t1 | MTR_6g075320 | 40.984 | 122 | 69 | 2 | 108 | 229 | 148 | 266 | 2.75e-21 | 95.5 |
MS.gene45237.t1 | MTR_2g094810 | 36.036 | 111 | 68 | 2 | 192 | 302 | 15 | 122 | 6.49e-16 | 75.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45237.t1 | AT5G15410 | 78.477 | 683 | 132 | 7 | 42 | 711 | 45 | 725 | 0.0 | 1042 |
MS.gene45237.t1 | AT5G15410 | 78.477 | 683 | 132 | 7 | 42 | 711 | 46 | 726 | 0.0 | 1040 |
MS.gene45237.t1 | AT5G54250 | 50.394 | 635 | 287 | 10 | 92 | 707 | 62 | 687 | 0.0 | 643 |
MS.gene45237.t1 | AT5G54250 | 50.394 | 635 | 287 | 10 | 92 | 707 | 62 | 687 | 0.0 | 643 |
MS.gene45237.t1 | AT5G54250 | 50.394 | 635 | 287 | 10 | 92 | 707 | 62 | 687 | 0.0 | 643 |
MS.gene45237.t1 | AT5G54250 | 49.764 | 635 | 286 | 11 | 92 | 707 | 62 | 682 | 0.0 | 629 |
MS.gene45237.t1 | AT2G24610 | 37.422 | 644 | 379 | 13 | 42 | 676 | 6 | 634 | 3.11e-131 | 405 |
MS.gene45237.t1 | AT2G24610 | 37.821 | 624 | 367 | 12 | 59 | 676 | 41 | 649 | 9.60e-131 | 404 |
MS.gene45237.t1 | AT1G15990 | 36.581 | 585 | 337 | 9 | 108 | 676 | 89 | 655 | 1.27e-128 | 399 |
MS.gene45237.t1 | AT2G23980 | 37.069 | 580 | 344 | 9 | 108 | 678 | 75 | 642 | 3.50e-128 | 397 |
MS.gene45237.t1 | AT4G30560 | 36.915 | 577 | 348 | 8 | 108 | 678 | 76 | 642 | 6.60e-128 | 396 |
MS.gene45237.t1 | AT4G30560 | 36.915 | 577 | 348 | 8 | 108 | 678 | 76 | 642 | 6.60e-128 | 396 |
MS.gene45237.t1 | AT4G30560 | 36.915 | 577 | 348 | 8 | 108 | 678 | 76 | 642 | 6.60e-128 | 396 |
MS.gene45237.t1 | AT2G23980 | 37.069 | 580 | 344 | 9 | 108 | 678 | 102 | 669 | 6.84e-128 | 397 |
MS.gene45237.t1 | AT2G23980 | 37.069 | 580 | 344 | 9 | 108 | 678 | 102 | 669 | 6.84e-128 | 397 |
MS.gene45237.t1 | AT2G23980 | 37.069 | 580 | 344 | 9 | 108 | 678 | 102 | 669 | 6.84e-128 | 397 |
MS.gene45237.t1 | AT2G23980 | 37.069 | 580 | 344 | 9 | 108 | 678 | 102 | 669 | 6.84e-128 | 397 |
MS.gene45237.t1 | AT2G23980 | 37.069 | 580 | 344 | 9 | 108 | 678 | 102 | 669 | 6.84e-128 | 397 |
MS.gene45237.t1 | AT4G30560 | 36.915 | 577 | 348 | 8 | 108 | 678 | 102 | 668 | 1.47e-127 | 396 |
MS.gene45237.t1 | AT4G30560 | 36.915 | 577 | 348 | 8 | 108 | 678 | 102 | 668 | 1.47e-127 | 396 |
MS.gene45237.t1 | AT1G19780 | 36.581 | 585 | 336 | 10 | 108 | 676 | 96 | 661 | 2.48e-127 | 396 |
MS.gene45237.t1 | AT1G01340 | 36.824 | 573 | 345 | 7 | 108 | 676 | 62 | 621 | 2.77e-127 | 394 |
MS.gene45237.t1 | AT1G01340 | 36.824 | 573 | 345 | 7 | 108 | 676 | 67 | 626 | 5.25e-127 | 394 |
MS.gene45237.t1 | AT5G53130 | 35.174 | 634 | 386 | 12 | 47 | 673 | 21 | 636 | 3.01e-126 | 392 |
MS.gene45237.t1 | AT5G57940 | 36.364 | 583 | 343 | 10 | 108 | 678 | 80 | 646 | 9.77e-125 | 388 |
MS.gene45237.t1 | AT5G57940 | 36.364 | 583 | 343 | 10 | 108 | 678 | 87 | 653 | 1.01e-124 | 388 |
MS.gene45237.t1 | AT5G57940 | 36.364 | 583 | 343 | 10 | 108 | 678 | 87 | 653 | 1.01e-124 | 388 |
MS.gene45237.t1 | AT4G30360 | 37.456 | 574 | 343 | 10 | 109 | 676 | 71 | 634 | 1.50e-124 | 387 |
MS.gene45237.t1 | AT2G28260 | 36.106 | 601 | 347 | 12 | 92 | 676 | 5 | 584 | 4.23e-124 | 384 |
MS.gene45237.t1 | AT5G14870 | 35.993 | 589 | 358 | 8 | 108 | 689 | 39 | 615 | 5.14e-124 | 385 |
MS.gene45237.t1 | AT2G28260 | 36.106 | 601 | 347 | 12 | 92 | 676 | 45 | 624 | 2.33e-123 | 383 |
MS.gene45237.t1 | AT2G23980 | 35.821 | 603 | 343 | 10 | 108 | 678 | 102 | 692 | 4.39e-123 | 385 |
MS.gene45237.t1 | AT2G23980 | 35.821 | 603 | 343 | 10 | 108 | 678 | 102 | 692 | 4.39e-123 | 385 |
MS.gene45237.t1 | AT2G23980 | 35.821 | 603 | 343 | 10 | 108 | 678 | 102 | 692 | 4.39e-123 | 385 |
MS.gene45237.t1 | AT2G23980 | 35.821 | 603 | 343 | 10 | 108 | 678 | 102 | 692 | 4.39e-123 | 385 |
MS.gene45237.t1 | AT4G01010 | 34.790 | 618 | 365 | 12 | 108 | 703 | 67 | 668 | 7.22e-122 | 380 |
MS.gene45237.t1 | AT4G01010 | 34.790 | 618 | 365 | 12 | 108 | 703 | 67 | 668 | 7.22e-122 | 380 |
MS.gene45237.t1 | AT3G48010 | 37.306 | 579 | 342 | 8 | 108 | 676 | 43 | 610 | 3.79e-121 | 378 |
MS.gene45237.t1 | AT2G46430 | 34.843 | 574 | 353 | 10 | 108 | 676 | 71 | 628 | 3.11e-110 | 350 |
MS.gene45237.t1 | AT2G46430 | 34.843 | 574 | 353 | 10 | 108 | 676 | 71 | 628 | 3.11e-110 | 350 |
MS.gene45237.t1 | AT3G17690 | 34.732 | 596 | 351 | 14 | 93 | 676 | 146 | 715 | 2.22e-103 | 332 |
MS.gene45237.t1 | AT1G19780 | 37.358 | 439 | 250 | 6 | 251 | 676 | 24 | 450 | 1.20e-99 | 317 |
MS.gene45237.t1 | AT3G17700 | 34.448 | 598 | 340 | 14 | 93 | 670 | 180 | 745 | 1.49e-98 | 320 |
MS.gene45237.t1 | AT3G17690 | 35.352 | 512 | 302 | 11 | 93 | 600 | 146 | 632 | 1.49e-93 | 304 |
MS.gene45237.t1 | AT3G17700 | 34.924 | 524 | 299 | 12 | 93 | 606 | 180 | 671 | 1.83e-89 | 294 |
MS.gene45237.t1 | AT2G46450 | 31.308 | 642 | 386 | 17 | 87 | 703 | 1 | 612 | 8.72e-89 | 291 |
MS.gene45237.t1 | AT2G46450 | 31.308 | 642 | 386 | 17 | 87 | 703 | 1 | 612 | 8.72e-89 | 291 |
MS.gene45237.t1 | AT2G46450 | 30.841 | 642 | 366 | 19 | 87 | 703 | 1 | 589 | 1.84e-81 | 271 |
MS.gene45237.t1 | AT2G46450 | 30.583 | 618 | 361 | 17 | 104 | 703 | 9 | 576 | 1.39e-80 | 269 |
MS.gene45237.t1 | AT2G46440 | 31.336 | 584 | 371 | 12 | 104 | 676 | 22 | 586 | 4.74e-78 | 262 |
MS.gene45237.t1 | AT3G17690 | 34.103 | 390 | 235 | 8 | 93 | 479 | 146 | 516 | 1.33e-64 | 223 |
MS.gene45237.t1 | AT2G46440 | 33.333 | 396 | 249 | 7 | 287 | 676 | 22 | 408 | 1.51e-60 | 210 |
MS.gene45237.t1 | AT4G22200 | 25.322 | 233 | 168 | 4 | 371 | 601 | 242 | 470 | 4.44e-13 | 73.2 |
MS.gene45237.t1 | AT4G22200 | 25.322 | 233 | 168 | 4 | 371 | 601 | 242 | 470 | 6.85e-13 | 72.8 |
Find 191 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCTCTTCTCTTATCAATTT+TGG | 0.079415 | 7.3:-85594182 | None:intergenic |
ACTAATTCTTGCAGCACTTT+TGG | 0.238112 | 7.3:+85595382 | MS.gene45237:intron |
TATTGGATGCAATCTTTCTT+TGG | 0.239216 | 7.3:+85594765 | MS.gene45237:CDS |
GCCGAACTCTTTGTCTTAAT+CGG | 0.243695 | 7.3:-85595957 | None:intergenic |
GGCACCATTTGGTGGGGATT+TGG | 0.246313 | 7.3:+85594320 | MS.gene45237:CDS |
TTGCCTAAAACTCCCCAATT+TGG | 0.255455 | 7.3:-85587691 | None:intergenic |
GGTAAACCTTAGGGAGAAAT+TGG | 0.263094 | 7.3:-85594247 | None:intergenic |
CACTCCACCATGCTGATTAC+TGG | 0.271370 | 7.3:-85587520 | None:intergenic |
GTTGACGGACCGTACAAATA+TGG | 0.279588 | 7.3:+85594892 | MS.gene45237:CDS |
AATTGCACGCGCTTGCTTCT+TGG | 0.279881 | 7.3:-85587724 | None:intergenic |
GTGCCTCCATTATCCCTTAC+AGG | 0.286550 | 7.3:-85596928 | None:intergenic |
GGTACATAACCGATCATTTC+CGG | 0.286930 | 7.3:+85596776 | MS.gene45237:CDS |
GAGCAGTATCAAAGCCAAAT+TGG | 0.306208 | 7.3:+85587677 | MS.gene45237:CDS |
GGTCAATAAACGGACGTCTT+AGG | 0.308093 | 7.3:-85596678 | None:intergenic |
GTGGATTGGTGGAAAATTCT+TGG | 0.308729 | 7.3:+85587417 | MS.gene45237:CDS |
TGCTATAATTTATAGGTTGC+TGG | 0.318815 | 7.3:+85594676 | MS.gene45237:intron |
TTGCTTGGACCTCATCAAAA+AGG | 0.331377 | 7.3:+85596080 | MS.gene45237:CDS |
CCGGCGGACGCTTCCCATTC+GGG | 0.347149 | 7.3:-85587610 | None:intergenic |
CTGCAATGTTCATGTCAATT+AGG | 0.348025 | 7.3:+85596974 | MS.gene45237:CDS |
ACCGGCGGACGCTTCCCATT+CGG | 0.349643 | 7.3:-85587611 | None:intergenic |
CAATGCCTTTGCTTAGACTT+TGG | 0.354479 | 7.3:-85596597 | None:intergenic |
TAGGCGATGAACTACTTTCT+TGG | 0.358512 | 7.3:+85596653 | MS.gene45237:CDS |
CAGCAGTGTGAAAGAACTAT+TGG | 0.359069 | 7.3:+85594748 | MS.gene45237:CDS |
CGGTGCATTTGTTTCATGTT+TGG | 0.361294 | 7.3:+85587902 | MS.gene45237:CDS |
GGATTTCCAATCGTTCCTTC+TGG | 0.367798 | 7.3:-85594823 | None:intergenic |
GTGACTCCTGTAAGGGATAA+TGG | 0.371039 | 7.3:+85596922 | MS.gene45237:CDS |
AAAGTCACAGGCTACATCTT+TGG | 0.371386 | 7.3:+85594299 | MS.gene45237:CDS |
ATCCAACCGCGCGTTGTTGT+TGG | 0.373879 | 7.3:+85587747 | MS.gene45237:CDS |
AGCAGTATCAAAGCCAAATT+GGG | 0.374364 | 7.3:+85587678 | MS.gene45237:CDS |
CTTGACAGCCAAGGAATTGC+TGG | 0.385081 | 7.3:-85594944 | None:intergenic |
AACTTGCTTATAGACGTTAC+AGG | 0.387453 | 7.3:+85596881 | MS.gene45237:CDS |
GATATGCTATGGTAAACCTT+AGG | 0.389660 | 7.3:-85594257 | None:intergenic |
TTCTTTCACACTGCTGTTGA+AGG | 0.390085 | 7.3:-85594741 | None:intergenic |
ATCTTGAACCCACAAGTAAC+TGG | 0.395487 | 7.3:+85595410 | MS.gene45237:CDS |
CGAGATACTACTCGTCGAAT+TGG | 0.400059 | 7.3:+85596833 | MS.gene45237:CDS |
TGTTATTCTTCCTGTTCCTC+AGG | 0.400526 | 7.3:+85588053 | MS.gene45237:CDS |
GCTACATCTTTGGCACCATT+TGG | 0.400815 | 7.3:+85594309 | MS.gene45237:CDS |
CGCGCGTTGTTGTTGGCGCG+TGG | 0.414532 | 7.3:+85587754 | MS.gene45237:CDS |
GGTACCATTGTTTCACAACT+TGG | 0.414666 | 7.3:+85596320 | MS.gene45237:intron |
CATCAAGCGCCACCTTTGCT+TGG | 0.417719 | 7.3:+85596065 | MS.gene45237:CDS |
AGGGTCGCCGTGTTTGTATA+TGG | 0.421162 | 7.3:+85587831 | MS.gene45237:CDS |
TCTGCTGAGACGGCAACTCC+AGG | 0.421930 | 7.3:-85587490 | None:intergenic |
AAGACTTACCTGAGGGTTTG+AGG | 0.427919 | 7.3:+85596037 | MS.gene45237:CDS |
TGGTTTAGCGGCGGTTGTTA+CGG | 0.428496 | 7.3:+85587858 | MS.gene45237:CDS |
TGTCATATCCAGCAATTCCT+TGG | 0.429530 | 7.3:+85594936 | MS.gene45237:CDS |
GTGACAACTGTCTGCACAGC+TGG | 0.429618 | 7.3:-85587584 | None:intergenic |
ACAAATGTGGCCGAGGAAGC+TGG | 0.430790 | 7.3:-85596706 | None:intergenic |
CTCGAACCAGGAGGTTTCTT+AGG | 0.431143 | 7.3:+85596634 | MS.gene45237:CDS |
TTTGTTTGCAGGTTGTGTTT+TGG | 0.431192 | 7.3:+85594150 | MS.gene45237:intron |
TTTGTTCCAATTTCTCCCTA+AGG | 0.438542 | 7.3:+85594241 | MS.gene45237:CDS |
AAATTTCTAACCTGAGGAAC+AGG | 0.441776 | 7.3:-85588063 | None:intergenic |
CCGAACTCTTTGTCTTAATC+GGG | 0.442264 | 7.3:-85595956 | None:intergenic |
CATCTTTGGCACCATTTGGT+GGG | 0.442499 | 7.3:+85594313 | MS.gene45237:CDS |
ACATCTTTGGCACCATTTGG+TGG | 0.449923 | 7.3:+85594312 | MS.gene45237:CDS |
CCCGATTAAGACAAAGAGTT+CGG | 0.451229 | 7.3:+85595956 | MS.gene45237:CDS |
GAATCGCTTGTTGTTGGATG+TGG | 0.452041 | 7.3:+85587955 | MS.gene45237:CDS |
GAGGTCCGGTGACTCCTGTA+AGG | 0.454750 | 7.3:+85596914 | MS.gene45237:CDS |
TGGATTGGTGGAAAATTCTT+GGG | 0.458229 | 7.3:+85587418 | MS.gene45237:CDS |
TTCTTGACAACATCTGTGAC+AGG | 0.460022 | 7.3:+85596352 | MS.gene45237:CDS |
TTGACGGACCGTACAAATAT+GGG | 0.461139 | 7.3:+85594893 | MS.gene45237:CDS |
CACTTCTAGCCAGTTACTTG+TGG | 0.461652 | 7.3:-85595419 | None:intergenic |
GCGCGTTGTTGTTGGCGCGT+GGG | 0.462346 | 7.3:+85587755 | MS.gene45237:CDS |
CTTGAATCAACTGAAGCATT+CGG | 0.467071 | 7.3:+85596733 | MS.gene45237:CDS |
GAGAGAGGAGAAGGTGGGCA+TGG | 0.467830 | 7.3:-85586821 | None:intergenic |
CAAATATGGGATTTACCAAT+GGG | 0.468155 | 7.3:+85594906 | MS.gene45237:CDS |
TCATCTCGAGAGAAGACTAA+AGG | 0.472290 | 7.3:-85596381 | None:intergenic |
GATTGGAACTAGATAGGAAC+CGG | 0.475356 | 7.3:-85587629 | None:intergenic |
ATCTTTGGCACCATTTGGTG+GGG | 0.476964 | 7.3:+85594314 | MS.gene45237:CDS |
AGTCTTCTCTCGAGATGAAA+AGG | 0.477345 | 7.3:+85596386 | MS.gene45237:CDS |
ACTTCTAGCCAGTTACTTGT+GGG | 0.480880 | 7.3:-85595418 | None:intergenic |
CTTATAGACGTTACAGGCAG+AGG | 0.484790 | 7.3:+85596887 | MS.gene45237:CDS |
ACGTCAGAGATGGGCGGCCA+TGG | 0.485284 | 7.3:+85595987 | MS.gene45237:CDS |
TTTGGGGTTTGATGACCCTC+AGG | 0.486459 | 7.3:+85594983 | MS.gene45237:CDS |
ATATGCTATGGTAAACCTTA+GGG | 0.486563 | 7.3:-85594256 | None:intergenic |
AGCATATGCATTGTACTCGC+TGG | 0.487171 | 7.3:+85595448 | MS.gene45237:CDS |
CGAACAATGAACACCATCCT+TGG | 0.487181 | 7.3:-85596556 | None:intergenic |
CCCGAATGGGAAGCGTCCGC+CGG | 0.493251 | 7.3:+85587610 | MS.gene45237:CDS |
CGCGTTGTTGTTGGCGCGTG+GGG | 0.494097 | 7.3:+85587756 | MS.gene45237:CDS |
ATGGGCGGCCATGGGAGGAG+AGG | 0.495829 | 7.3:+85595996 | MS.gene45237:CDS |
GGTTGTTACGGTGGCGCGTA+CGG | 0.497452 | 7.3:+85587870 | MS.gene45237:CDS |
CCACCTTCTCCTCTCTCCCT+AGG | 0.501836 | 7.3:+85586827 | MS.gene45237:CDS |
CGCCAACAACAACGCGCGGT+TGG | 0.503704 | 7.3:-85587749 | None:intergenic |
CATCTCATCCTCTCCTCCCA+TGG | 0.505028 | 7.3:-85596004 | None:intergenic |
TCGAGAGAATCGCTTGTTGT+TGG | 0.506065 | 7.3:+85587949 | MS.gene45237:CDS |
GCTGGAAGCCGGTCAATAAA+CGG | 0.507628 | 7.3:-85596688 | None:intergenic |
ATCGTTGAGTTTCCACCACA+TGG | 0.509992 | 7.3:-85594844 | None:intergenic |
ATACCTAGGGAGAGAGGAGA+AGG | 0.515734 | 7.3:-85586830 | None:intergenic |
CAGTTGTCACCAACCCGAAT+GGG | 0.516483 | 7.3:+85587597 | MS.gene45237:CDS |
TGACCGGCTTCCAGCTTCCT+CGG | 0.516912 | 7.3:+85596696 | MS.gene45237:CDS |
ACTCCACCATGCTGATTACT+GGG | 0.517503 | 7.3:-85587519 | None:intergenic |
GTATATGGATGGTGGTTTAG+CGG | 0.518430 | 7.3:+85587846 | MS.gene45237:CDS |
CGTCAGAGATGGGCGGCCAT+GGG | 0.522711 | 7.3:+85595988 | MS.gene45237:CDS |
TGGAATGGTGGATGAGGAGG+AGG | 0.523089 | 7.3:+85595923 | MS.gene45237:CDS |
TCTCATTTGCAAATTTGTAC+CGG | 0.523525 | 7.3:-85596795 | None:intergenic |
TAAGACGTCCGTTTATTGAC+CGG | 0.524457 | 7.3:+85596680 | MS.gene45237:CDS |
ACAAATATGGGATTTACCAA+TGG | 0.526887 | 7.3:+85594905 | MS.gene45237:CDS |
TTTGTTGATCGGAAACATCC+AGG | 0.527636 | 7.3:+85595486 | MS.gene45237:CDS |
CCTATGTGTTTAGATGTTGA+CGG | 0.528827 | 7.3:+85594877 | MS.gene45237:CDS |
CTAAGAAACCTCCTGGTTCG+AGG | 0.530685 | 7.3:-85596633 | None:intergenic |
TTCTCATCATAGATATGCTA+TGG | 0.530876 | 7.3:-85594268 | None:intergenic |
TGGCCGAGGAAGCTGGAAGC+CGG | 0.532343 | 7.3:-85596699 | None:intergenic |
GAGTCCAAATCCCCACCAAA+TGG | 0.533365 | 7.3:-85594324 | None:intergenic |
CCTAGGGAGAGAGGAGAAGG+TGG | 0.533903 | 7.3:-85586827 | None:intergenic |
TATAGGTTGCTGGAGGGTGT+TGG | 0.535254 | 7.3:+85594686 | MS.gene45237:intron |
TTGTTACCAGAAGGAACGAT+TGG | 0.535755 | 7.3:+85594817 | MS.gene45237:CDS |
TGGTAAATCCCATATTTGTA+CGG | 0.545024 | 7.3:-85594901 | None:intergenic |
TCATCGCCTAAGAAACCTCC+TGG | 0.546060 | 7.3:-85596640 | None:intergenic |
GCAACTAGTGTCCTCGAACC+AGG | 0.546742 | 7.3:+85596622 | MS.gene45237:CDS |
ATGTCTCTCCTCAAACCCTC+AGG | 0.547362 | 7.3:-85596045 | None:intergenic |
TTCTTTGGCATGTTCAGAGG+AGG | 0.550810 | 7.3:+85594780 | MS.gene45237:CDS |
CGCTGTCTATAGGGAGAGAA+GGG | 0.551121 | 7.3:+85587812 | MS.gene45237:CDS |
AGGATGGTGTTCATTGTTCG+CGG | 0.551595 | 7.3:+85596559 | MS.gene45237:CDS |
ATGAACACCATCCTTGGTAC+AGG | 0.552013 | 7.3:-85596550 | None:intergenic |
TCTTTCTTTGGCATGTTCAG+AGG | 0.552414 | 7.3:+85594777 | MS.gene45237:CDS |
ACTCGTCGAATTGGAGAACA+TGG | 0.552999 | 7.3:+85596842 | MS.gene45237:CDS |
CGGACGCTTCCCATTCGGGT+TGG | 0.553468 | 7.3:-85587606 | None:intergenic |
CAGCTGGTGGAGTGGAACAC+TGG | 0.556792 | 7.3:-85587568 | None:intergenic |
TCTTTGCCATGACTGCATGT+AGG | 0.558556 | 7.3:-85595870 | None:intergenic |
CAGGCAGAGGACTAGAGGTC+CGG | 0.559424 | 7.3:+85596900 | MS.gene45237:CDS |
CTGCTGAGACGGCAACTCCA+GGG | 0.563137 | 7.3:-85587489 | None:intergenic |
TGGGTTGTCGTCTGCTGAGA+CGG | 0.563719 | 7.3:-85587500 | None:intergenic |
GTTCCAATCCAAAACCGTCC+CGG | 0.565425 | 7.3:+85587643 | MS.gene45237:CDS |
AAGGAATTGCTGGATATGAC+AGG | 0.571022 | 7.3:-85594934 | None:intergenic |
CAGAGATGGGCGGCCATGGG+AGG | 0.571124 | 7.3:+85595991 | MS.gene45237:CDS |
GCGCTGTCTATAGGGAGAGA+AGG | 0.576916 | 7.3:+85587811 | MS.gene45237:CDS |
AAGACAAACAAATGTGGCCG+AGG | 0.578636 | 7.3:-85596713 | None:intergenic |
ACAGTTGTCACCAACCCGAA+TGG | 0.580011 | 7.3:+85587596 | MS.gene45237:CDS |
TATAAGTCTTTGTTACCAGA+AGG | 0.580998 | 7.3:+85594808 | MS.gene45237:CDS |
GGTATTCCTACATGCAGTCA+TGG | 0.581719 | 7.3:+85595864 | MS.gene45237:intron |
ACGTTGTTGATTGTGTTGCT+AGG | 0.583661 | 7.3:-85587448 | None:intergenic |
GTCTTGATGCTCAAAACTTG+AGG | 0.585851 | 7.3:+85596755 | MS.gene45237:CDS |
CATTATATGAGATCTTTCAA+AGG | 0.586227 | 7.3:+85588012 | MS.gene45237:CDS |
CGTTACAGGCAGAGGACTAG+AGG | 0.586315 | 7.3:+85596895 | MS.gene45237:CDS |
AGGTGATCCTGTACCAAGGA+TGG | 0.586464 | 7.3:+85596543 | MS.gene45237:CDS |
TTGGTGGAAAATTCTTGGGA+AGG | 0.587898 | 7.3:+85587422 | MS.gene45237:CDS |
TCTCATATAATGAGAAGCAA+TGG | 0.588285 | 7.3:-85588001 | None:intergenic |
ACAACTGTCTGCACAGCTGG+TGG | 0.588412 | 7.3:-85587581 | None:intergenic |
CCGTGTTTGTATATGGATGG+TGG | 0.588479 | 7.3:+85587838 | MS.gene45237:CDS |
GGTACAAATTTGCAAATGAG+AGG | 0.592078 | 7.3:+85596797 | MS.gene45237:CDS |
TGTTACGGTGGCGCGTACGG+TGG | 0.595042 | 7.3:+85587873 | MS.gene45237:CDS |
TTGATGATACCTAGGGAGAG+AGG | 0.597070 | 7.3:-85586836 | None:intergenic |
AAATTTGTACCGGAAATGAT+CGG | 0.599973 | 7.3:-85596785 | None:intergenic |
TATAATTTATAGGTTGCTGG+AGG | 0.602212 | 7.3:+85594679 | MS.gene45237:intron |
TGATGAGGTCCAAGCAAAGG+TGG | 0.605075 | 7.3:-85596074 | None:intergenic |
CATGGGAGGAGAGGATGAGA+TGG | 0.605094 | 7.3:+85596005 | MS.gene45237:CDS |
TCATCCAAGTTGTGAAACAA+TGG | 0.606915 | 7.3:-85596324 | None:intergenic |
ACTCTTTGTCTTAATCGGGA+AGG | 0.608162 | 7.3:-85595952 | None:intergenic |
ATAAAGAATCTTGACAGCCA+AGG | 0.609534 | 7.3:-85594953 | None:intergenic |
ACGATTGGAAATCCATGTGG+TGG | 0.610145 | 7.3:+85594832 | MS.gene45237:CDS |
TCGCCGTGTTTGTATATGGA+TGG | 0.612064 | 7.3:+85587835 | MS.gene45237:CDS |
ACATGGAATGGTGGATGAGG+AGG | 0.614255 | 7.3:+85595920 | MS.gene45237:CDS |
TTATCCCTTACAGGAGTCAC+CGG | 0.615827 | 7.3:-85596919 | None:intergenic |
TGTCTGCACAGCTGGTGGAG+TGG | 0.617877 | 7.3:-85587576 | None:intergenic |
TTGGATGTGGGAAACTCGTG+TGG | 0.619126 | 7.3:+85587968 | MS.gene45237:CDS |
TTTAGCGGCGGTTGTTACGG+TGG | 0.620430 | 7.3:+85587861 | MS.gene45237:CDS |
TATCATTCAAGATGATCATG+TGG | 0.620994 | 7.3:-85596997 | None:intergenic |
TGAGATGTCGTGACATGGAA+TGG | 0.621051 | 7.3:+85595908 | MS.gene45237:CDS |
GGCGCGTACGGTGGTTGATG+CGG | 0.621889 | 7.3:+85587882 | MS.gene45237:CDS |
CGAAACCAAAGTCTAAGCAA+AGG | 0.623581 | 7.3:+85596592 | MS.gene45237:CDS |
AAATGAGAGGCTAAAGAGAA+CGG | 0.624073 | 7.3:+85596810 | MS.gene45237:CDS |
CACGCGCCAACAACAACGCG+CGG | 0.624375 | 7.3:-85587753 | None:intergenic |
GTGAAACAGATAATTAGAGA+AGG | 0.624615 | 7.3:+85596523 | MS.gene45237:intron |
ATATGACAGGAAGTGCCCAT+TGG | 0.625889 | 7.3:-85594921 | None:intergenic |
ATAATGGAGGCACTGAGCGT+AGG | 0.626496 | 7.3:+85596938 | MS.gene45237:CDS |
ATAATTTATAGGTTGCTGGA+GGG | 0.628248 | 7.3:+85594680 | MS.gene45237:intron |
AATCGCTTGTTGTTGGATGT+GGG | 0.629974 | 7.3:+85587956 | MS.gene45237:CDS |
AGGTCCGGTGACTCCTGTAA+GGG | 0.632405 | 7.3:+85596915 | MS.gene45237:CDS |
CCGTCAACATCTAAACACAT+AGG | 0.632629 | 7.3:-85594877 | None:intergenic |
CCACCATCCATATACAAACA+CGG | 0.632835 | 7.3:-85587838 | None:intergenic |
GTGACATGGAATGGTGGATG+AGG | 0.635573 | 7.3:+85595917 | MS.gene45237:CDS |
GCAGCTGAGATGTCGTGACA+TGG | 0.637860 | 7.3:+85595903 | MS.gene45237:CDS |
CTGATCAAAGACTTACCTGA+GGG | 0.638121 | 7.3:+85596030 | MS.gene45237:CDS |
CTAGGGAGAGAGGAGAAGGT+GGG | 0.651532 | 7.3:-85586826 | None:intergenic |
TGTTACGCATGCACACAAGT+TGG | 0.659954 | 7.3:+85587541 | MS.gene45237:CDS |
AGCAACACAATCAACAACGT+TGG | 0.660753 | 7.3:+85587451 | MS.gene45237:CDS |
TCTTGACAACATCTGTGACA+GGG | 0.672297 | 7.3:+85596353 | MS.gene45237:CDS |
TGATTCAAGACAAACAAATG+TGG | 0.676291 | 7.3:-85596719 | None:intergenic |
TATGGATGGTGGTTTAGCGG+CGG | 0.688411 | 7.3:+85587849 | MS.gene45237:CDS |
CGACAACCCAGTAATCAGCA+TGG | 0.695371 | 7.3:+85587513 | MS.gene45237:CDS |
GAGAAGGTGATCCTGTACCA+AGG | 0.698618 | 7.3:+85596539 | MS.gene45237:CDS |
GCAGTATCAAAGCCAAATTG+GGG | 0.708168 | 7.3:+85587679 | MS.gene45237:CDS |
ACTGATCAAAGACTTACCTG+AGG | 0.709178 | 7.3:+85596029 | MS.gene45237:CDS |
CTCGTCGAATTGGAGAACAT+GGG | 0.715220 | 7.3:+85596843 | MS.gene45237:CDS |
GGTGACAGCAGTGATGACCC+TGG | 0.715870 | 7.3:+85587472 | MS.gene45237:CDS |
CAACCCAGTAATCAGCATGG+TGG | 0.718534 | 7.3:+85587516 | MS.gene45237:CDS |
GATGTCGTGACATGGAATGG+TGG | 0.720965 | 7.3:+85595911 | MS.gene45237:CDS |
TGGATGTGGGAAACTCGTGT+GGG | 0.728221 | 7.3:+85587969 | MS.gene45237:CDS |
TGGAACTAGATAGGAACCGG+CGG | 0.730012 | 7.3:-85587626 | None:intergenic |
ACTCCTGTAAGGGATAATGG+AGG | 0.737690 | 7.3:+85596925 | MS.gene45237:CDS |
GGAACGATTGGAAATCCATG+TGG | 0.744870 | 7.3:+85594829 | MS.gene45237:CDS |
ACTAGTGTCCTCGAACCAGG+AGG | 0.746623 | 7.3:+85596625 | MS.gene45237:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 85586823 | 85597017 | 85586823 | ID=MS.gene45237 |
chr7.3 | mRNA | 85586823 | 85597017 | 85586823 | ID=MS.gene45237.t1;Parent=MS.gene45237 |
chr7.3 | exon | 85586823 | 85586848 | 85586823 | ID=MS.gene45237.t1.exon1;Parent=MS.gene45237.t1 |
chr7.3 | CDS | 85586823 | 85586848 | 85586823 | ID=cds.MS.gene45237.t1;Parent=MS.gene45237.t1 |
chr7.3 | exon | 85587417 | 85588074 | 85587417 | ID=MS.gene45237.t1.exon2;Parent=MS.gene45237.t1 |
chr7.3 | CDS | 85587417 | 85588074 | 85587417 | ID=cds.MS.gene45237.t1;Parent=MS.gene45237.t1 |
chr7.3 | exon | 85594161 | 85594376 | 85594161 | ID=MS.gene45237.t1.exon3;Parent=MS.gene45237.t1 |
chr7.3 | CDS | 85594161 | 85594376 | 85594161 | ID=cds.MS.gene45237.t1;Parent=MS.gene45237.t1 |
chr7.3 | exon | 85594691 | 85595004 | 85594691 | ID=MS.gene45237.t1.exon4;Parent=MS.gene45237.t1 |
chr7.3 | CDS | 85594691 | 85595004 | 85594691 | ID=cds.MS.gene45237.t1;Parent=MS.gene45237.t1 |
chr7.3 | exon | 85595396 | 85595507 | 85595396 | ID=MS.gene45237.t1.exon5;Parent=MS.gene45237.t1 |
chr7.3 | CDS | 85595396 | 85595507 | 85595396 | ID=cds.MS.gene45237.t1;Parent=MS.gene45237.t1 |
chr7.3 | exon | 85595865 | 85596101 | 85595865 | ID=MS.gene45237.t1.exon6;Parent=MS.gene45237.t1 |
chr7.3 | CDS | 85595865 | 85596101 | 85595865 | ID=cds.MS.gene45237.t1;Parent=MS.gene45237.t1 |
chr7.3 | exon | 85596321 | 85596407 | 85596321 | ID=MS.gene45237.t1.exon7;Parent=MS.gene45237.t1 |
chr7.3 | CDS | 85596321 | 85596407 | 85596321 | ID=cds.MS.gene45237.t1;Parent=MS.gene45237.t1 |
chr7.3 | exon | 85596532 | 85597017 | 85596532 | ID=MS.gene45237.t1.exon8;Parent=MS.gene45237.t1 |
chr7.3 | CDS | 85596532 | 85597017 | 85596532 | ID=cds.MS.gene45237.t1;Parent=MS.gene45237.t1 |
Gene Sequence |
Protein sequence |