Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073086.t1 | XP_013464918.1 | 99.1 | 686 | 6 | 0 | 1 | 686 | 1 | 686 | 0.00E+00 | 1226.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073086.t1 | Q3E7D0 | 72.2 | 711 | 167 | 7 | 2 | 686 | 4 | 709 | 6.6e-266 | 917.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073086.t1 | A0A072VC14 | 99.1 | 686 | 6 | 0 | 1 | 686 | 1 | 686 | 0.0e+00 | 1226.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene073086 | MS.gene065219 | PPI |
| MS.gene073086 | MS.gene027793 | PPI |
| MS.gene073086 | MS.gene069113 | PPI |
| MS.gene073086 | MS.gene070688 | PPI |
| MS.gene073086 | MS.gene046435 | PPI |
| MS.gene073086 | MS.gene008938 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073086.t1 | MTR_2g084895 | 99.125 | 686 | 6 | 0 | 1 | 686 | 1 | 686 | 0.0 | 1373 |
| MS.gene073086.t1 | MTR_4g055290 | 78.814 | 708 | 108 | 10 | 1 | 686 | 1 | 688 | 0.0 | 1049 |
| MS.gene073086.t1 | MTR_2g103510 | 68.072 | 664 | 139 | 9 | 28 | 686 | 4 | 599 | 0.0 | 844 |
| MS.gene073086.t1 | MTR_8g068550 | 58.456 | 544 | 224 | 1 | 143 | 686 | 222 | 763 | 0.0 | 689 |
| MS.gene073086.t1 | MTR_5g032020 | 48.515 | 707 | 301 | 8 | 23 | 686 | 19 | 705 | 0.0 | 651 |
| MS.gene073086.t1 | MTR_8g086520 | 36.754 | 536 | 301 | 5 | 147 | 678 | 20 | 521 | 1.87e-118 | 364 |
| MS.gene073086.t1 | MTR_3g080390 | 38.361 | 537 | 292 | 6 | 147 | 678 | 15 | 517 | 3.85e-117 | 361 |
| MS.gene073086.t1 | MTR_2g016460 | 35.261 | 536 | 309 | 5 | 147 | 678 | 20 | 521 | 2.54e-109 | 341 |
| MS.gene073086.t1 | MTR_8g086520 | 36.920 | 474 | 263 | 5 | 147 | 618 | 20 | 459 | 1.39e-103 | 324 |
| MS.gene073086.t1 | MTR_8g063220 | 34.741 | 521 | 300 | 5 | 164 | 678 | 44 | 530 | 6.94e-102 | 322 |
| MS.gene073086.t1 | MTR_1g021120 | 35.140 | 535 | 305 | 9 | 146 | 674 | 42 | 540 | 1.67e-100 | 319 |
| MS.gene073086.t1 | MTR_4g106750 | 34.549 | 521 | 301 | 5 | 164 | 678 | 43 | 529 | 4.03e-100 | 317 |
| MS.gene073086.t1 | MTR_3g078270 | 34.799 | 523 | 297 | 6 | 164 | 678 | 43 | 529 | 7.47e-99 | 314 |
| MS.gene073086.t1 | MTR_3g103230 | 33.589 | 521 | 303 | 6 | 164 | 678 | 68 | 551 | 4.01e-97 | 310 |
| MS.gene073086.t1 | MTR_4g106750 | 34.241 | 514 | 298 | 5 | 171 | 678 | 1 | 480 | 7.40e-96 | 304 |
| MS.gene073086.t1 | MTR_5g035180 | 32.759 | 522 | 310 | 5 | 164 | 678 | 48 | 535 | 2.32e-95 | 305 |
| MS.gene073086.t1 | MTR_8g086520 | 37.343 | 399 | 230 | 3 | 147 | 543 | 20 | 400 | 2.96e-89 | 285 |
| MS.gene073086.t1 | MTR_8g086520 | 36.636 | 434 | 239 | 5 | 247 | 678 | 6 | 405 | 8.05e-89 | 283 |
| MS.gene073086.t1 | MTR_1g106085 | 32.463 | 536 | 316 | 9 | 151 | 678 | 27 | 524 | 2.39e-87 | 283 |
| MS.gene073086.t1 | MTR_5g022110 | 31.972 | 563 | 334 | 8 | 122 | 678 | 25 | 544 | 2.48e-86 | 281 |
| MS.gene073086.t1 | MTR_4g106750 | 32.170 | 401 | 234 | 4 | 282 | 678 | 11 | 377 | 6.81e-64 | 217 |
| MS.gene073086.t1 | MTR_8g086535 | 33.621 | 116 | 77 | 0 | 428 | 543 | 1 | 116 | 5.67e-15 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073086.t1 | AT2G27810 | 73.410 | 692 | 156 | 7 | 21 | 686 | 20 | 709 | 0.0 | 985 |
| MS.gene073086.t1 | AT2G27810 | 70.950 | 716 | 156 | 8 | 21 | 686 | 20 | 733 | 0.0 | 973 |
| MS.gene073086.t1 | AT2G27810 | 72.203 | 572 | 131 | 7 | 21 | 566 | 20 | 589 | 0.0 | 777 |
| MS.gene073086.t1 | AT2G27810 | 70.667 | 525 | 126 | 7 | 21 | 519 | 20 | 542 | 0.0 | 693 |
| MS.gene073086.t1 | AT4G38050 | 49.561 | 684 | 307 | 7 | 15 | 678 | 39 | 704 | 0.0 | 641 |
| MS.gene073086.t1 | AT2G34190 | 36.031 | 519 | 294 | 5 | 164 | 678 | 37 | 521 | 3.24e-113 | 351 |
| MS.gene073086.t1 | AT2G05760 | 37.662 | 539 | 297 | 7 | 145 | 678 | 13 | 517 | 4.41e-113 | 350 |
| MS.gene073086.t1 | AT1G60030 | 36.660 | 521 | 290 | 5 | 164 | 678 | 49 | 535 | 6.16e-107 | 335 |
| MS.gene073086.t1 | AT5G62890 | 35.509 | 521 | 296 | 5 | 164 | 678 | 43 | 529 | 6.09e-102 | 322 |
| MS.gene073086.t1 | AT5G62890 | 35.509 | 521 | 296 | 5 | 164 | 678 | 43 | 529 | 6.09e-102 | 322 |
| MS.gene073086.t1 | AT5G62890 | 35.509 | 521 | 296 | 5 | 164 | 678 | 43 | 529 | 6.09e-102 | 322 |
| MS.gene073086.t1 | AT5G49990 | 35.125 | 521 | 298 | 5 | 164 | 678 | 39 | 525 | 6.13e-101 | 319 |
| MS.gene073086.t1 | AT5G49990 | 35.125 | 521 | 298 | 5 | 164 | 678 | 39 | 525 | 6.13e-101 | 319 |
| MS.gene073086.t1 | AT5G49990 | 35.125 | 521 | 298 | 5 | 164 | 678 | 39 | 525 | 6.13e-101 | 319 |
| MS.gene073086.t1 | AT5G49990 | 35.125 | 521 | 298 | 5 | 164 | 678 | 39 | 525 | 6.13e-101 | 319 |
| MS.gene073086.t1 | AT5G62890 | 38.955 | 421 | 237 | 3 | 164 | 582 | 43 | 445 | 3.56e-96 | 305 |
| MS.gene073086.t1 | AT2G26510 | 35.240 | 542 | 302 | 9 | 146 | 677 | 43 | 545 | 3.03e-95 | 305 |
| MS.gene073086.t1 | AT1G49960 | 35.564 | 523 | 297 | 5 | 162 | 678 | 35 | 523 | 8.53e-95 | 303 |
| MS.gene073086.t1 | AT1G10540 | 32.955 | 528 | 303 | 8 | 164 | 678 | 47 | 536 | 3.91e-94 | 302 |
| MS.gene073086.t1 | AT1G65550 | 32.358 | 547 | 317 | 7 | 147 | 678 | 30 | 538 | 3.88e-91 | 294 |
| MS.gene073086.t1 | AT1G10540 | 34.890 | 364 | 206 | 6 | 164 | 518 | 47 | 388 | 7.58e-69 | 230 |
| MS.gene073086.t1 | AT2G26510 | 36.316 | 380 | 212 | 6 | 146 | 518 | 43 | 399 | 1.31e-67 | 228 |
| MS.gene073086.t1 | AT2G26510 | 36.785 | 367 | 202 | 6 | 146 | 505 | 43 | 386 | 4.77e-66 | 224 |
| MS.gene073086.t1 | AT5G25420 | 29.773 | 440 | 217 | 8 | 147 | 582 | 42 | 393 | 4.04e-54 | 191 |
Find 211 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACAATTGCTGTTACTAAAA+TGG | 0.114020 | 2.2:+12657003 | MS.gene073086:CDS |
| CAGCATTATGTTTCTATATT+AGG | 0.169100 | 2.2:+12652794 | MS.gene073086:CDS |
| ATGAGGATGGGTTTGCTTTA+AGG | 0.185976 | 2.2:+12652458 | MS.gene073086:CDS |
| GGCACTGACAAGTTGGAATT+TGG | 0.213465 | 2.2:-12660458 | None:intergenic |
| ACCTGATTTGCAGGTTCCTT+TGG | 0.236656 | 2.2:+12655806 | MS.gene073086:intron |
| TGTTTATCTGGCTCCAGTTT+TGG | 0.253065 | 2.2:+12653099 | MS.gene073086:CDS |
| GGTCTCTGGGGTACTGGAAC+TGG | 0.268292 | 2.2:+12656953 | MS.gene073086:CDS |
| GGGTTCATTGCTTCAATTCC+TGG | 0.274645 | 2.2:+12660266 | MS.gene073086:CDS |
| CGAATCCACGGATGAGATTA+AGG | 0.274927 | 2.2:-12656084 | None:intergenic |
| GGAAGGTCTTTCTAGTGTTT+TGG | 0.275832 | 2.2:+12656928 | MS.gene073086:CDS |
| TCTCGCAATATCATAATAAT+TGG | 0.281920 | 2.2:+12660377 | MS.gene073086:CDS |
| CTTCGTAAGATATCTGTTCT+TGG | 0.293844 | 2.2:+12655652 | MS.gene073086:CDS |
| GAGACCAATGCCGGTGATTC+TGG | 0.294315 | 2.2:+12652178 | MS.gene073086:CDS |
| TTGGCTGGTCTCTGGGGTAC+TGG | 0.299524 | 2.2:+12656947 | MS.gene073086:CDS |
| CTAAGAGATTCACCTGGTTT+AGG | 0.302106 | 2.2:+12652502 | MS.gene073086:CDS |
| CCCGCATACTTTCAACAATA+TGG | 0.308753 | 2.2:+12660428 | MS.gene073086:CDS |
| GGGCTAAGAAAACCGGTTTC+AGG | 0.311969 | 2.2:+12652140 | MS.gene073086:CDS |
| TTGGTCTCGCCGGAGAATTT+TGG | 0.313765 | 2.2:-12652163 | None:intergenic |
| CATTGGCAACCCATAGTCTT+TGG | 0.316812 | 2.2:-12661566 | None:intergenic |
| TACCGAACGTTGGCGAGGTT+CGG | 0.317187 | 2.2:-12652062 | None:intergenic |
| CCTGATTTGCAGGTTCCTTT+GGG | 0.322059 | 2.2:+12655807 | MS.gene073086:intron |
| AAACATACCTGCCTCAAATA+TGG | 0.329584 | 2.2:+12655902 | MS.gene073086:CDS |
| TAAACTCATACCTTACTAAC+AGG | 0.333726 | 2.2:-12653900 | None:intergenic |
| ATTCCTGGAGTCATGGTTGC+TGG | 0.335456 | 2.2:+12660281 | MS.gene073086:CDS |
| GGGCCTTTCCAAAGCAAATA+TGG | 0.336173 | 2.2:+12660515 | MS.gene073086:CDS |
| TCCTGTATTCCACTGGAAAA+TGG | 0.341057 | 2.2:+12656040 | MS.gene073086:CDS |
| CCTGCTATTGCCAAAGACTA+TGG | 0.347150 | 2.2:+12661556 | MS.gene073086:CDS |
| AACCAGTTCCACCTTCTTCA+TGG | 0.355404 | 2.2:+12652119 | MS.gene073086:CDS |
| ACCGAACGTTGGCGAGGTTC+GGG | 0.358868 | 2.2:-12652061 | None:intergenic |
| TTTGCAGGTTCCTTTGGGTT+TGG | 0.367091 | 2.2:+12655812 | MS.gene073086:intron |
| TCAACTGCGCTCTTCGTGTC+TGG | 0.372892 | 2.2:+12653013 | MS.gene073086:CDS |
| CTTTGGGTTTGGCAATTACA+TGG | 0.373887 | 2.2:+12655823 | MS.gene073086:CDS |
| CTTAATCTCATCCGTGGATT+CGG | 0.378682 | 2.2:+12656085 | MS.gene073086:CDS |
| TTAGTTCCCATTGGTGTGTA+TGG | 0.383223 | 2.2:+12652767 | MS.gene073086:intron |
| ACTTGTCATTGTTCCTGCTA+TGG | 0.384370 | 2.2:+12652835 | MS.gene073086:CDS |
| CTGGTCTCCTCTGCTTTATG+TGG | 0.387107 | 2.2:+12660300 | MS.gene073086:CDS |
| ACAATTGCTGTTACTAAAAT+GGG | 0.389381 | 2.2:+12657004 | MS.gene073086:CDS |
| GTCACAACCTTTGTAGTTGT+AGG | 0.394524 | 2.2:-12655877 | None:intergenic |
| GCTTTCTTGCTGACCGAAGC+TGG | 0.394590 | 2.2:+12655852 | MS.gene073086:CDS |
| CGAGGTTCGGGTTCGGACAT+TGG | 0.396581 | 2.2:-12652049 | None:intergenic |
| GTCCAACTGCAGCAATGGTT+GGG | 0.397694 | 2.2:-12655448 | None:intergenic |
| ATACCCCTCCATATTTGCTT+TGG | 0.399659 | 2.2:-12660523 | None:intergenic |
| CTTGTCATTGTTCCTGCTAT+GGG | 0.400087 | 2.2:+12652836 | MS.gene073086:CDS |
| GGGGTTCTTAGTCGCGGAAT+TGG | 0.401025 | 2.2:+12656902 | MS.gene073086:CDS |
| TCTTAGTCGCGGAATTGGTC+TGG | 0.401963 | 2.2:+12656907 | MS.gene073086:CDS |
| ATTTCCCTATCCATTGCAAT+GGG | 0.414720 | 2.2:+12656013 | MS.gene073086:CDS |
| ACACGACCAGCTTCGAGATC+GGG | 0.415784 | 2.2:-12652247 | None:intergenic |
| AAGCCGCAGAGCAGTTCAAT+TGG | 0.419441 | 2.2:+12657027 | MS.gene073086:CDS |
| GCAGCGAAAATATCGTGTTT+AGG | 0.420690 | 2.2:-12661423 | None:intergenic |
| TGGGCAATGCTTACAGCATT+GGG | 0.434766 | 2.2:+12660320 | MS.gene073086:CDS |
| GCCCATGAAGAAGGTGGAAC+TGG | 0.436537 | 2.2:-12652121 | None:intergenic |
| TCAGCTTCTCTAGACTTAAC+CGG | 0.436599 | 2.2:-12652217 | None:intergenic |
| AAAATCCGACCAACTCTCAT+TGG | 0.436965 | 2.2:-12661583 | None:intergenic |
| GGTGGAACTGGTTTAGCTTC+CGG | 0.436991 | 2.2:-12652109 | None:intergenic |
| GCATCTAGACCTCCAACTCC+TGG | 0.438157 | 2.2:+12656881 | MS.gene073086:CDS |
| GTGGGCAATGCTTACAGCAT+TGG | 0.448946 | 2.2:+12660319 | MS.gene073086:CDS |
| GAGTTGATGATTGCCAAAAC+TGG | 0.449602 | 2.2:-12653112 | None:intergenic |
| TCCAGGTTGCCCTTGATACA+AGG | 0.452484 | 2.2:+12653067 | MS.gene073086:CDS |
| CCGTGAGAAGCCACAATGTA+AGG | 0.453471 | 2.2:-12660494 | None:intergenic |
| CCTTACATTGTGGCTTCTCA+CGG | 0.455086 | 2.2:+12660494 | MS.gene073086:CDS |
| TGCTTCAATTCCTGGAGTCA+TGG | 0.456853 | 2.2:+12660274 | MS.gene073086:CDS |
| TTCATTCAGTCCTTGAAACT+CGG | 0.458195 | 2.2:-12653137 | None:intergenic |
| GAATTATGTCCCTGTTAGTA+AGG | 0.461216 | 2.2:+12653890 | MS.gene073086:CDS |
| ACGTTGGCGAGGTTCGGGTT+CGG | 0.462008 | 2.2:-12652056 | None:intergenic |
| TTCACTACAGGCGGTGGAAG+CGG | 0.464149 | 2.2:-12652319 | None:intergenic |
| TCTTCATGGGCTAAGAAAAC+CGG | 0.464598 | 2.2:+12652133 | MS.gene073086:CDS |
| ATCAACTCACCCGAGTTTCA+AGG | 0.466883 | 2.2:+12653127 | MS.gene073086:CDS |
| ACCCGAACCTCGCCAACGTT+CGG | 0.469036 | 2.2:+12652060 | MS.gene073086:CDS |
| AGCCTCACTATAGCGTAGAT+TGG | 0.473513 | 2.2:-12660348 | None:intergenic |
| TCTCTCCGTTTCTTCACTAC+AGG | 0.474573 | 2.2:-12652331 | None:intergenic |
| CCCTTGTATCAAGGGCAACC+TGG | 0.474719 | 2.2:-12653068 | None:intergenic |
| CGACTAAGAACCCCAGGAGT+TGG | 0.475770 | 2.2:-12656893 | None:intergenic |
| AAAAGAAGACCCTTGTATCA+AGG | 0.477284 | 2.2:-12653077 | None:intergenic |
| GGCTCTCTTCTAGCAACATC+AGG | 0.478148 | 2.2:-12661535 | None:intergenic |
| TTCAGATGGGTGAAGTGGGT+TGG | 0.479937 | 2.2:+12661604 | MS.gene073086:CDS |
| ACTGCAGAAAGCACATTTCA+AGG | 0.482048 | 2.2:+12655934 | MS.gene073086:CDS |
| ACATATAATGAAGGAGCTGC+AGG | 0.483798 | 2.2:+12653819 | MS.gene073086:CDS |
| TCTCCGTTTGCTACCGGCGG+AGG | 0.484917 | 2.2:-12652283 | None:intergenic |
| CCATAGTCTTTGGCAATAGC+AGG | 0.484927 | 2.2:-12661556 | None:intergenic |
| CCGTTTGCTACCGGCGGAGG+AGG | 0.485109 | 2.2:-12652280 | None:intergenic |
| TGGTGCAATACAAATATTAG+TGG | 0.485741 | 2.2:+12655520 | MS.gene073086:CDS |
| ACCAGCTTCGAGATCGGGAT+TGG | 0.486403 | 2.2:-12652242 | None:intergenic |
| CCTCCTCCGCCGGTAGCAAA+CGG | 0.491924 | 2.2:+12652280 | MS.gene073086:CDS |
| ACTATATTAACAGGGAAGGT+TGG | 0.496292 | 2.2:+12660242 | MS.gene073086:intron |
| TTGTTGAAAGTATGCGGGTA+TGG | 0.498329 | 2.2:-12660423 | None:intergenic |
| GTAGTTGTAGGCTCCAGCTT+CGG | 0.499373 | 2.2:-12655865 | None:intergenic |
| CACCGCCTGTAGTGAAGAAA+CGG | 0.503007 | 2.2:+12652326 | MS.gene073086:CDS |
| TGAATACCATACACACCAAT+GGG | 0.503312 | 2.2:-12652773 | None:intergenic |
| TCTGATAGTGTTATCTCTCG+TGG | 0.504058 | 2.2:+12657060 | MS.gene073086:CDS |
| TACAGTATTATCCAAGATAA+CGG | 0.505137 | 2.2:-12661470 | None:intergenic |
| AGCCGCAGAGCAGTTCAATT+GGG | 0.506746 | 2.2:+12657028 | MS.gene073086:CDS |
| GCGAGGAATGAAGAAGTTGC+TGG | 0.508573 | 2.2:+12652415 | MS.gene073086:CDS |
| AGTCCAACTGCAGCAATGGT+TGG | 0.508809 | 2.2:-12655449 | None:intergenic |
| CCGCAGACTGTGGATGAGGA+TGG | 0.510661 | 2.2:+12652445 | MS.gene073086:CDS |
| TCCCCAACCATTGCTGCAGT+TGG | 0.510791 | 2.2:+12655446 | MS.gene073086:CDS |
| GCCAATCCCGATCTCGAAGC+TGG | 0.512032 | 2.2:+12652241 | MS.gene073086:CDS |
| TCATTCAGTCCTTGAAACTC+GGG | 0.513438 | 2.2:-12653136 | None:intergenic |
| AATTTCCCTATCCATTGCAA+TGG | 0.514239 | 2.2:+12656012 | MS.gene073086:CDS |
| CGTTTCTTCACTACAGGCGG+TGG | 0.514408 | 2.2:-12652325 | None:intergenic |
| CAAACTTTCCTTGGATACAC+TGG | 0.514705 | 2.2:+12653868 | MS.gene073086:CDS |
| AATCTACGCTATAGTGAGGC+TGG | 0.514725 | 2.2:+12660350 | MS.gene073086:CDS |
| ATAACTTGGCACTGACAAGT+TGG | 0.515363 | 2.2:-12660465 | None:intergenic |
| AAGAACGCGGAGTATACGTT+TGG | 0.515456 | 2.2:+12661506 | MS.gene073086:CDS |
| CATCTAGACCTCCAACTCCT+GGG | 0.515747 | 2.2:+12656882 | MS.gene073086:CDS |
| CCTCCATATTTGCTTTGGAA+AGG | 0.519150 | 2.2:-12660518 | None:intergenic |
| GTGCTCAGAAACCATATTTG+AGG | 0.520839 | 2.2:-12655913 | None:intergenic |
| ACCAGTTCCACCTTCTTCAT+GGG | 0.521722 | 2.2:+12652120 | MS.gene073086:CDS |
| CTAAGAACCCCAGGAGTTGG+AGG | 0.523552 | 2.2:-12656890 | None:intergenic |
| CTGACCAGAATCACCGGCAT+TGG | 0.526147 | 2.2:-12652182 | None:intergenic |
| GACACGACCAGCTTCGAGAT+CGG | 0.528251 | 2.2:-12652248 | None:intergenic |
| GTTGGCACATGTATCGAGAT+TGG | 0.528428 | 2.2:+12655500 | MS.gene073086:CDS |
| CTCAACCTTCACCTGACCAT+TGG | 0.528859 | 2.2:-12652374 | None:intergenic |
| CCGCGTTCTTGCTTACTGCC+AGG | 0.530307 | 2.2:-12661493 | None:intergenic |
| TCCAACTGCAGCAATGGTTG+GGG | 0.530330 | 2.2:-12655447 | None:intergenic |
| TTCCTCGCCGTTCTCCTCAC+CGG | 0.531151 | 2.2:-12652400 | None:intergenic |
| GGGGTACTCCTGTATTCCAC+TGG | 0.533008 | 2.2:+12656033 | MS.gene073086:CDS |
| TCAGGTGAAGGTTGAGCAGC+CGG | 0.534755 | 2.2:+12652381 | MS.gene073086:CDS |
| ATATTAACAGGGAAGGTTGG+AGG | 0.541804 | 2.2:+12660245 | MS.gene073086:intron |
| CTGATAGTGTTATCTCTCGT+GGG | 0.542089 | 2.2:+12657061 | MS.gene073086:CDS |
| GATAGGGAAATTTAAACCAT+GGG | 0.542839 | 2.2:-12656001 | None:intergenic |
| CTGCTATTGCCAAAGACTAT+GGG | 0.543700 | 2.2:+12661557 | MS.gene073086:CDS |
| GTCATTGTTCCTGCTATGGG+AGG | 0.544012 | 2.2:+12652839 | MS.gene073086:CDS |
| CAAGGTAACTCCTCCTCCGC+CGG | 0.544175 | 2.2:+12652270 | MS.gene073086:CDS |
| TTCACCTGACCATTGGTACT+CGG | 0.545845 | 2.2:-12652367 | None:intergenic |
| TGGTCTCCTCTGCTTTATGT+GGG | 0.546533 | 2.2:+12660301 | MS.gene073086:CDS |
| GGTTTCCTTAATCTCATCCG+TGG | 0.548519 | 2.2:+12656079 | MS.gene073086:CDS |
| ACATGAGATCCTCCCATAGC+AGG | 0.549471 | 2.2:-12652848 | None:intergenic |
| GGTTTCAGGCCAAAATTCTC+CGG | 0.549553 | 2.2:+12652154 | MS.gene073086:CDS |
| CTTACATTGTGGCTTCTCAC+GGG | 0.550965 | 2.2:+12660495 | MS.gene073086:CDS |
| CGCAGACTGTGGATGAGGAT+GGG | 0.552092 | 2.2:+12652446 | MS.gene073086:CDS |
| AAAGAAGACCCTTGTATCAA+GGG | 0.554159 | 2.2:-12653076 | None:intergenic |
| GGATAGGGAAATTTAAACCA+TGG | 0.554977 | 2.2:-12656002 | None:intergenic |
| TGAGCAGCCGGTGAGGAGAA+CGG | 0.556833 | 2.2:+12652393 | MS.gene073086:CDS |
| TGAAAGTCCAACTGCAGCAA+TGG | 0.557943 | 2.2:-12655453 | None:intergenic |
| CATATAATGAAGGAGCTGCA+GGG | 0.557990 | 2.2:+12653820 | MS.gene073086:CDS |
| AGACCAGCAACCATGACTCC+AGG | 0.558088 | 2.2:-12660284 | None:intergenic |
| TTCTCTCCGTTTGCTACCGG+CGG | 0.558834 | 2.2:-12652286 | None:intergenic |
| CTCGCCAACGTTCGGTACAA+TGG | 0.559635 | 2.2:+12652068 | MS.gene073086:CDS |
| GAAATTCCGACATATAATGA+AGG | 0.561093 | 2.2:+12653810 | MS.gene073086:intron |
| AGTTCCGAGTACCAATGGTC+AGG | 0.561177 | 2.2:+12652363 | MS.gene073086:CDS |
| ACATAATTCCAGTGTATCCA+AGG | 0.561306 | 2.2:-12653876 | None:intergenic |
| TATTAACAGGGAAGGTTGGA+GGG | 0.561391 | 2.2:+12660246 | MS.gene073086:intron |
| GTTGCCGCAGACTGTGGATG+AGG | 0.562028 | 2.2:+12652441 | MS.gene073086:CDS |
| GTACCCCATTGCAATGGATA+GGG | 0.562246 | 2.2:-12656017 | None:intergenic |
| TCTAGACTTAACCGGCGGTA+AGG | 0.562449 | 2.2:-12652209 | None:intergenic |
| CTCCGTTTCTTCACTACAGG+CGG | 0.564503 | 2.2:-12652328 | None:intergenic |
| TTATTGTCTTTACCTAAACC+AGG | 0.567090 | 2.2:-12652514 | None:intergenic |
| TTCTCCGGCGAGACCAATGC+CGG | 0.567124 | 2.2:+12652169 | MS.gene073086:CDS |
| TTTGGGTTTGGCAATTACAT+GGG | 0.568714 | 2.2:+12655824 | MS.gene073086:CDS |
| CTGAATACCATACACACCAA+TGG | 0.569880 | 2.2:-12652774 | None:intergenic |
| CCATATTGTTGAAAGTATGC+GGG | 0.570367 | 2.2:-12660428 | None:intergenic |
| TCTCGAAGCTGGTCGTGTCA+AGG | 0.572024 | 2.2:+12652252 | MS.gene073086:CDS |
| ATGTAAGGCTGAAAATAACT+TGG | 0.573317 | 2.2:-12660479 | None:intergenic |
| ATCACCGGCATTGGTCTCGC+CGG | 0.575281 | 2.2:-12652173 | None:intergenic |
| TTCTTAGCCCATGAAGAAGG+TGG | 0.575288 | 2.2:-12652127 | None:intergenic |
| AGTACCCCATTGCAATGGAT+AGG | 0.575630 | 2.2:-12656018 | None:intergenic |
| GCCATATTGTTGAAAGTATG+CGG | 0.580122 | 2.2:-12660429 | None:intergenic |
| TGGTCAGATAACCTTACCGC+CGG | 0.582962 | 2.2:+12652198 | MS.gene073086:CDS |
| TCAGAAACCATATTTGAGGC+AGG | 0.584266 | 2.2:-12655909 | None:intergenic |
| ATAGGAGGAAATTGCTGCAG+TGG | 0.584474 | 2.2:+12652988 | MS.gene073086:intron |
| TTTCAGGTTTATCAATCCTG+TGG | 0.587332 | 2.2:+12655418 | MS.gene073086:intron |
| CCAGGTTGCCCTTGATACAA+GGG | 0.591004 | 2.2:+12653068 | MS.gene073086:CDS |
| GATGGAGTTCCGAGTACCAA+TGG | 0.591787 | 2.2:+12652358 | MS.gene073086:CDS |
| TCGATACATGTGCCAACAAG+AGG | 0.592425 | 2.2:-12655494 | None:intergenic |
| ATTGGTACTCGGAACTCCAT+CGG | 0.593106 | 2.2:-12652356 | None:intergenic |
| ATATAATGAAGGAGCTGCAG+GGG | 0.596382 | 2.2:+12653821 | MS.gene073086:CDS |
| GGTTATCTGACCAGAATCAC+CGG | 0.597229 | 2.2:-12652188 | None:intergenic |
| TGAAGGTTGAGCAGCCGGTG+AGG | 0.598381 | 2.2:+12652386 | MS.gene073086:CDS |
| ATCTTGGATAATACTGTACC+TGG | 0.600671 | 2.2:+12661475 | MS.gene073086:CDS |
| AGTCGCGGAATTGGTCTGGA+AGG | 0.601125 | 2.2:+12656911 | MS.gene073086:CDS |
| CATGTAATTGCCAAACCCAA+AGG | 0.608401 | 2.2:-12655822 | None:intergenic |
| TGGTTCGTTGCCGCAGACTG+TGG | 0.608510 | 2.2:+12652435 | MS.gene073086:CDS |
| ACGTTCGGTACAATGGTCAC+CGG | 0.609281 | 2.2:+12652075 | MS.gene073086:CDS |
| TATGGGTTGCCAATGAGAGT+TGG | 0.609953 | 2.2:+12661574 | MS.gene073086:CDS |
| ACAGGAGTACCCCATTGCAA+TGG | 0.611535 | 2.2:-12656023 | None:intergenic |
| CTTTCCAAAGCAAATATGGA+GGG | 0.614764 | 2.2:+12660519 | MS.gene073086:CDS |
| CAGGAATCTAACCGAATCCA+CGG | 0.616676 | 2.2:-12656096 | None:intergenic |
| ACTCCTGGGGTTCTTAGTCG+CGG | 0.620983 | 2.2:+12656896 | MS.gene073086:CDS |
| GAGTACCAATGGTCAGGTGA+AGG | 0.622716 | 2.2:+12652369 | MS.gene073086:CDS |
| GCAGCTCCTTCATTATATGT+CGG | 0.622848 | 2.2:-12653816 | None:intergenic |
| ACTACAGGCGGTGGAAGCGG+TGG | 0.624345 | 2.2:-12652316 | None:intergenic |
| AACTGGTTTAGCTTCCGGCG+TGG | 0.626580 | 2.2:-12652104 | None:intergenic |
| ATGGTTGGGGATACAACCAC+AGG | 0.628708 | 2.2:-12655434 | None:intergenic |
| ATTCCGCGACTAAGAACCCC+AGG | 0.628826 | 2.2:-12656899 | None:intergenic |
| GGTTGCCAATGAGAGTTGGT+CGG | 0.630838 | 2.2:+12661578 | MS.gene073086:CDS |
| CCATCCTCATCCACAGTCTG+CGG | 0.635353 | 2.2:-12652445 | None:intergenic |
| ATGCAATCAAATCATCCCCA+TGG | 0.635438 | 2.2:+12655985 | MS.gene073086:CDS |
| CATTGTACCGAACGTTGGCG+AGG | 0.638058 | 2.2:-12652067 | None:intergenic |
| CCTTTCCAAAGCAAATATGG+AGG | 0.641808 | 2.2:+12660518 | MS.gene073086:CDS |
| AAGAAACGGAGAGACTCCGA+TGG | 0.643551 | 2.2:+12652340 | MS.gene073086:CDS |
| GCTTCCGGCGTGGATAACGC+CGG | 0.647288 | 2.2:-12652094 | None:intergenic |
| CTGCATATATTAGAAATATG+CGG | 0.650229 | 2.2:-12655678 | None:intergenic |
| ATAGCAGGAACAATGACAAG+TGG | 0.651348 | 2.2:-12652833 | None:intergenic |
| ATCTAGACCTCCAACTCCTG+GGG | 0.653295 | 2.2:+12656883 | MS.gene073086:CDS |
| TTTCCAAAGCAAATATGGAG+GGG | 0.656358 | 2.2:+12660520 | MS.gene073086:CDS |
| ACGCGGAGTATACGTTTGGT+CGG | 0.659264 | 2.2:+12661510 | MS.gene073086:CDS |
| GTGACCATTGTACCGAACGT+TGG | 0.661147 | 2.2:-12652072 | None:intergenic |
| AATGGCTCTTGTGATGTGCG+TGG | 0.663958 | 2.2:+12656058 | MS.gene073086:CDS |
| GCTGGAGCCTACAACTACAA+AGG | 0.665279 | 2.2:+12655870 | MS.gene073086:CDS |
| GTCCAATCTACGCTATAGTG+AGG | 0.677718 | 2.2:+12660346 | MS.gene073086:CDS |
| AAACTCATACCTTACTAACA+GGG | 0.679251 | 2.2:-12653899 | None:intergenic |
| GTCACCGGCGTTATCCACGC+CGG | 0.684583 | 2.2:+12652090 | MS.gene073086:CDS |
| GCATTGCCCACATAAAGCAG+AGG | 0.690220 | 2.2:-12660307 | None:intergenic |
| TATAATGAAGGAGCTGCAGG+GGG | 0.691532 | 2.2:+12653822 | MS.gene073086:CDS |
| CCTGGCAGTAAGCAAGAACG+CGG | 0.691600 | 2.2:+12661493 | MS.gene073086:CDS |
| AGCCGGTGAGGAGAACGGCG+AGG | 0.711202 | 2.2:+12652398 | MS.gene073086:CDS |
| GCTTCTCTAGACTTAACCGG+CGG | 0.711836 | 2.2:-12652214 | None:intergenic |
| TATGAACTAAGAGATTCACC+TGG | 0.712831 | 2.2:+12652496 | MS.gene073086:CDS |
| ATAGGGAAATTTAAACCATG+GGG | 0.713448 | 2.2:-12656000 | None:intergenic |
| TTTCCCTATCCATTGCAATG+GGG | 0.717290 | 2.2:+12656014 | MS.gene073086:CDS |
| CACCCAATTGAACTGCTCTG+CGG | 0.718427 | 2.2:-12657030 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 12652052 | 12661633 | 12652052 | ID=MS.gene073086 |
| chr2.2 | mRNA | 12652052 | 12661633 | 12652052 | ID=MS.gene073086.t1;Parent=MS.gene073086 |
| chr2.2 | exon | 12652052 | 12652523 | 12652052 | ID=MS.gene073086.t1.exon1;Parent=MS.gene073086.t1 |
| chr2.2 | CDS | 12652052 | 12652523 | 12652052 | ID=cds.MS.gene073086.t1;Parent=MS.gene073086.t1 |
| chr2.2 | exon | 12652771 | 12652868 | 12652771 | ID=MS.gene073086.t1.exon2;Parent=MS.gene073086.t1 |
| chr2.2 | CDS | 12652771 | 12652868 | 12652771 | ID=cds.MS.gene073086.t1;Parent=MS.gene073086.t1 |
| chr2.2 | exon | 12652992 | 12653162 | 12652992 | ID=MS.gene073086.t1.exon3;Parent=MS.gene073086.t1 |
| chr2.2 | CDS | 12652992 | 12653162 | 12652992 | ID=cds.MS.gene073086.t1;Parent=MS.gene073086.t1 |
| chr2.2 | exon | 12653811 | 12653911 | 12653811 | ID=MS.gene073086.t1.exon4;Parent=MS.gene073086.t1 |
| chr2.2 | CDS | 12653811 | 12653911 | 12653811 | ID=cds.MS.gene073086.t1;Parent=MS.gene073086.t1 |
| chr2.2 | exon | 12655424 | 12655559 | 12655424 | ID=MS.gene073086.t1.exon5;Parent=MS.gene073086.t1 |
| chr2.2 | CDS | 12655424 | 12655559 | 12655424 | ID=cds.MS.gene073086.t1;Parent=MS.gene073086.t1 |
| chr2.2 | exon | 12655649 | 12655699 | 12655649 | ID=MS.gene073086.t1.exon6;Parent=MS.gene073086.t1 |
| chr2.2 | CDS | 12655649 | 12655699 | 12655649 | ID=cds.MS.gene073086.t1;Parent=MS.gene073086.t1 |
| chr2.2 | exon | 12655819 | 12656106 | 12655819 | ID=MS.gene073086.t1.exon7;Parent=MS.gene073086.t1 |
| chr2.2 | CDS | 12655819 | 12656106 | 12655819 | ID=cds.MS.gene073086.t1;Parent=MS.gene073086.t1 |
| chr2.2 | exon | 12656848 | 12657082 | 12656848 | ID=MS.gene073086.t1.exon8;Parent=MS.gene073086.t1 |
| chr2.2 | CDS | 12656848 | 12657082 | 12656848 | ID=cds.MS.gene073086.t1;Parent=MS.gene073086.t1 |
| chr2.2 | exon | 12660255 | 12660541 | 12660255 | ID=MS.gene073086.t1.exon9;Parent=MS.gene073086.t1 |
| chr2.2 | CDS | 12660255 | 12660541 | 12660255 | ID=cds.MS.gene073086.t1;Parent=MS.gene073086.t1 |
| chr2.2 | exon | 12661412 | 12661633 | 12661412 | ID=MS.gene073086.t1.exon10;Parent=MS.gene073086.t1 |
| chr2.2 | CDS | 12661412 | 12661633 | 12661412 | ID=cds.MS.gene073086.t1;Parent=MS.gene073086.t1 |
| Gene Sequence |
| Protein sequence |