AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene070688

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene070688.t1 MTR_5g032020 93.883 703 15 2 1 677 1 701 0.0 1337
MS.gene070688.t1 MTR_8g068550 70.451 731 153 7 8 677 31 759 0.0 1008
MS.gene070688.t1 MTR_2g084895 50.977 665 303 7 25 677 29 682 0.0 652
MS.gene070688.t1 MTR_4g055290 49.493 691 299 9 14 677 17 684 0.0 639
MS.gene070688.t1 MTR_2g103510 46.037 656 286 8 25 677 5 595 0.0 568
MS.gene070688.t1 MTR_8g086520 37.170 530 297 5 144 669 20 517 1.12e-113 352
MS.gene070688.t1 MTR_3g080390 37.594 532 295 6 143 669 14 513 7.85e-112 347
MS.gene070688.t1 MTR_2g016460 35.171 526 305 4 148 669 24 517 1.78e-107 336
MS.gene070688.t1 MTR_3g078270 35.907 518 294 4 158 669 40 525 2.37e-107 336
MS.gene070688.t1 MTR_8g063220 36.293 518 292 5 158 669 41 526 2.29e-106 333
MS.gene070688.t1 MTR_4g106750 35.328 518 297 4 158 669 40 525 2.32e-106 333
MS.gene070688.t1 MTR_8g086520 39.726 438 244 3 144 579 20 439 2.39e-103 323
MS.gene070688.t1 MTR_4g106750 35.039 508 292 4 168 669 1 476 2.45e-102 321
MS.gene070688.t1 MTR_5g035180 34.682 519 300 4 158 669 45 531 2.01e-101 320
MS.gene070688.t1 MTR_3g103230 33.398 515 302 6 161 669 68 547 8.35e-95 304
MS.gene070688.t1 MTR_1g106085 32.331 532 320 6 144 669 23 520 6.63e-92 295
MS.gene070688.t1 MTR_1g021120 32.645 533 319 5 143 669 42 540 1.14e-89 290
MS.gene070688.t1 MTR_8g086520 38.191 398 226 3 144 539 20 399 6.97e-88 281
MS.gene070688.t1 MTR_8g086520 36.449 428 238 4 244 669 6 401 9.53e-86 275
MS.gene070688.t1 MTR_5g022110 33.269 520 296 5 161 669 61 540 1.73e-85 279
MS.gene070688.t1 MTR_4g106750 32.658 395 230 3 279 669 11 373 7.61e-70 233
MS.gene070688.t1 MTR_5g032030 61.644 73 21 1 12 77 27 99 1.85e-22 93.2
MS.gene070688.t1 MTR_8g086535 41.304 92 54 0 448 539 24 115 1.96e-15 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene070688.t1 AT4G38050 65.735 680 213 8 8 673 36 709 0.0 848
MS.gene070688.t1 AT2G27810 52.562 683 289 9 25 677 28 705 0.0 638
MS.gene070688.t1 AT2G27810 50.919 707 288 10 25 677 28 729 0.0 628
MS.gene070688.t1 AT2G27810 53.792 567 229 8 25 563 28 589 1.55e-179 523
MS.gene070688.t1 AT2G27810 53.269 520 210 8 25 516 28 542 2.50e-157 465
MS.gene070688.t1 AT1G60030 38.803 518 279 4 158 669 46 531 3.90e-119 367
MS.gene070688.t1 AT2G05760 38.086 533 293 5 142 669 13 513 5.60e-112 347
MS.gene070688.t1 AT2G34190 35.849 530 304 5 144 669 20 517 5.67e-110 342
MS.gene070688.t1 AT5G62890 36.293 518 292 4 158 669 40 525 1.75e-108 338
MS.gene070688.t1 AT5G62890 36.293 518 292 4 158 669 40 525 1.75e-108 338
MS.gene070688.t1 AT5G62890 36.293 518 292 4 158 669 40 525 1.75e-108 338
MS.gene070688.t1 AT5G49990 35.460 533 306 6 143 669 21 521 8.57e-106 332
MS.gene070688.t1 AT5G49990 35.460 533 306 6 143 669 21 521 8.57e-106 332
MS.gene070688.t1 AT5G49990 35.460 533 306 6 143 669 21 521 8.57e-106 332
MS.gene070688.t1 AT5G49990 35.460 533 306 6 143 669 21 521 8.57e-106 332
MS.gene070688.t1 AT1G10540 35.305 524 294 8 158 670 44 533 6.50e-103 324
MS.gene070688.t1 AT1G49960 36.873 518 289 5 158 669 34 519 1.12e-99 315
MS.gene070688.t1 AT5G62890 37.389 452 249 3 158 607 40 459 7.03e-98 309
MS.gene070688.t1 AT2G26510 34.522 533 308 6 144 669 44 542 5.60e-89 288
MS.gene070688.t1 AT1G65550 32.203 531 313 7 152 669 38 534 3.94e-85 278
MS.gene070688.t1 AT1G10540 35.890 365 207 5 158 515 44 388 1.63e-72 240
MS.gene070688.t1 AT2G26510 36.605 377 215 4 143 515 43 399 2.29e-64 219
MS.gene070688.t1 AT2G26510 36.538 364 207 4 143 502 43 386 9.21e-61 209
MS.gene070688.t1 AT5G25420 29.691 421 208 6 161 579 59 393 3.70e-53 189

Find 192 sgRNAs with CRISPR-Local

Find 376 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGACATGACTTACTTGTTTA+AGG 0.077021 5.3:+20660310 None:intergenic
TAGTATATTGGCTGGTCTTT+GGG 0.186238 5.3:-20660878 MS.gene070688:CDS
TCTACAATGTTGTTTCTTTC+CGG 0.199188 5.3:-20662785 MS.gene070688:CDS
TTTCCAGAAGGAGTTGAATT+TGG 0.226139 5.3:-20664624 MS.gene070688:CDS
GCAGTATCTCTTATCTATTA+TGG 0.244533 5.3:-20662999 MS.gene070688:intron
GTAGTATATTGGCTGGTCTT+TGG 0.248801 5.3:-20660879 MS.gene070688:CDS
GAAGTCCTGAAGTGGAAAAT+AGG 0.249412 5.3:+20661142 None:intergenic
TGCTTCCATTCCACAGGCCT+TGG 0.253689 5.3:-20660562 MS.gene070688:CDS
TTGGCTGGTCTTTGGGGTTC+AGG 0.262793 5.3:-20660871 MS.gene070688:CDS
GGGTTTGTTTCTGATTATTC+AGG 0.269736 5.3:-20664990 MS.gene070688:CDS
TCTCCAAATTCAACTCCTTC+TGG 0.279848 5.3:+20664621 None:intergenic
CAACACCATGCAAGTTTCTT+TGG 0.280482 5.3:+20659978 None:intergenic
CCTCGTTCTTGTTTACTTCC+CGG 0.284283 5.3:+20660068 None:intergenic
CGTTCATGGGCTAAGAAAAC+TGG 0.287394 5.3:-20665011 MS.gene070688:CDS
TTCAATATTCCAATGTATCT+TGG 0.297916 5.3:-20662399 MS.gene070688:CDS
GGAACAAAAGGTGCAACTTT+TGG 0.299363 5.3:+20665062 None:intergenic
ACCGTTGGCGCAACCACAAC+AGG 0.317314 5.3:+20661819 None:intergenic
TGACACTATGACCATGATTA+TGG 0.319148 5.3:+20661120 None:intergenic
CGCATAAGGAACAAGATAAC+TGG 0.321940 5.3:+20660362 None:intergenic
CAATGTATCTTGGGATTTAG+TGG 0.331523 5.3:-20662389 MS.gene070688:CDS
TTGATCCTCTTCTCATTTGT+AGG 0.332106 5.3:-20660757 MS.gene070688:intron
ACAATCACAAGCTGGTGTTT+TGG 0.333614 5.3:-20664847 MS.gene070688:CDS
GTGGGCTCTTACCGTGGCAT+TGG 0.337955 5.3:-20660517 MS.gene070688:CDS
CTTAAAGAAAATCCGGGTTT+AGG 0.338465 5.3:-20664561 MS.gene070688:intron
GTTGGATCTATCTCTATCTT+AGG 0.353421 5.3:+20664897 None:intergenic
ACTATACTGCACTCTTACTT+TGG 0.354542 5.3:-20662755 MS.gene070688:CDS
GGTCTTTGGGGTTCAGGTAC+CGG 0.358878 5.3:-20660865 MS.gene070688:CDS
GGAGGGTTTCTGTAGTATAT+TGG 0.361128 5.3:-20660890 MS.gene070688:CDS
ATGACTGGTACCATGACTAA+TGG 0.362103 5.3:+20662933 None:intergenic
ATCAGCCCTGCAATGCTTCA+TGG 0.374512 5.3:+20661228 None:intergenic
CATATACCATGAAGCATTGC+AGG 0.376910 5.3:-20661234 MS.gene070688:CDS
GCCCATGAACGTAATTCTCT+TGG 0.376998 5.3:+20665023 None:intergenic
TCAATATTCCAATGTATCTT+GGG 0.377573 5.3:-20662398 MS.gene070688:CDS
CAGTGTAACCACCATGTTCA+TGG 0.386977 5.3:+20660121 None:intergenic
TCAAGTGGGCCATTCCATTC+AGG 0.393498 5.3:-20660333 MS.gene070688:CDS
CTTCAAGGTGCTATAATTGT+TGG 0.396001 5.3:-20662422 MS.gene070688:CDS
AGGCTGGTATTGTTGAAAAT+AGG 0.398406 5.3:+20660404 None:intergenic
TGGGCTCTTACCGTGGCATT+GGG 0.399078 5.3:-20660516 MS.gene070688:CDS
ATTCCTCGGCTCACAACTCC+TGG 0.404762 5.3:+20660919 None:intergenic
TTACTTGTTTAAGGCCTGAA+TGG 0.405824 5.3:+20660319 None:intergenic
GTGTGGACTTAAAGAAAATC+CGG 0.409950 5.3:-20664568 MS.gene070688:CDS
ACTGTTGGTGGCATTTCTAC+TGG 0.415195 5.3:-20660102 MS.gene070688:CDS
CGTCACTTCAAGTTAATTCA+AGG 0.416440 5.3:-20660951 MS.gene070688:CDS
CGTTGAGCGCAACAATAACT+TGG 0.418430 5.3:-20661360 MS.gene070688:CDS
TTCTGTCAAAGTCGTTGAAC+CGG 0.418532 5.3:+20660846 None:intergenic
CCCTGTTGTGGTTGCGCCAA+CGG 0.418704 5.3:-20661820 MS.gene070688:CDS
ATGTTTGAACTCGGTACATT+GGG 0.420675 5.3:+20661283 None:intergenic
CCACTTGACGCTGCCGCATA+AGG 0.423290 5.3:+20660348 None:intergenic
ACCATGCAAGTTTCTTTGGC+AGG 0.423585 5.3:+20659982 None:intergenic
CACTGTTCCACAAATTGCAT+TGG 0.423678 5.3:-20661733 MS.gene070688:CDS
AAACAACATTGTAGAAATTA+CGG 0.423737 5.3:+20662793 None:intergenic
TCACCATTCAAAGGCAAAAC+AGG 0.425968 5.3:+20664798 None:intergenic
ATGGTCAATCAGCTAGCTTC+AGG 0.426770 5.3:-20660476 MS.gene070688:CDS
CCCTTGCACTAAAGGAAGTC+GGG 0.431146 5.3:+20662730 None:intergenic
GGTTTAGCGTTCTTCAGTTA+CGG 0.431955 5.3:-20661786 MS.gene070688:CDS
TTATAAATGCTCAAGAATAT+CGG 0.433551 5.3:-20662673 MS.gene070688:CDS
AAGTCCTGAAGTGGAAAATA+GGG 0.433703 5.3:+20661143 None:intergenic
TGACTGGTACCATGACTAAT+GGG 0.437934 5.3:+20662934 None:intergenic
CCCACAAGCTGGTATTTGCT+TGG 0.438042 5.3:-20661760 MS.gene070688:CDS
AATAGAACCAATGCAATTTG+TGG 0.438702 5.3:+20661726 None:intergenic
ACTGGTTGCTTCTGTTGATT+CGG 0.443347 5.3:-20661098 MS.gene070688:intron
AACGAGCTCCCTTGCACTAA+AGG 0.444458 5.3:+20662722 None:intergenic
CCCATGAACGTAATTCTCTT+GGG 0.446265 5.3:+20665024 None:intergenic
TCTGATTATTCAGGTGAAGC+AGG 0.448658 5.3:-20664981 MS.gene070688:CDS
CTCGTTCTTGTTTACTTCCC+GGG 0.450845 5.3:+20660069 None:intergenic
GTCGGCGTTGCATTGTTCCT+TGG 0.453402 5.3:-20660441 MS.gene070688:CDS
TCTCCTTGCTTCCATTCCAC+AGG 0.455637 5.3:-20660568 MS.gene070688:CDS
CAGCATAAATTCGAAATAAG+TGG 0.456937 5.3:+20661491 None:intergenic
GCGCCAACGGTTGCTGCTGT+AGG 0.457783 5.3:-20661807 MS.gene070688:CDS
CCTCTTCCTCTATGATGAAA+AGG 0.458047 5.3:+20664933 None:intergenic
TGCTCCTGTGACAGAGGAAA+AGG 0.458208 5.3:-20664694 MS.gene070688:CDS
GGCCTATCGACTTTACAGTA+TGG 0.462728 5.3:-20660495 MS.gene070688:CDS
CTTACAGCACTATATATCAT+TGG 0.465141 5.3:-20662976 MS.gene070688:CDS
CTCACAACTCCTGGAGTTGG+AGG 0.475666 5.3:+20660928 None:intergenic
CCAAGCAAATACCAGCTTGT+GGG 0.476150 5.3:+20661760 None:intergenic
ATTAGTCATGGTACCAGTCA+TGG 0.477474 5.3:-20662931 MS.gene070688:CDS
CTTCGAGGAATATCTATCTC+TGG 0.481735 5.3:-20661517 MS.gene070688:CDS
TTCAGGAACATGACAATTGT+CGG 0.483776 5.3:-20660459 MS.gene070688:CDS
ACATGGTGATGGTGAAGTTA+AGG 0.487479 5.3:-20664655 MS.gene070688:CDS
CCTTATGCGGCAGCGTCAAG+TGG 0.488646 5.3:-20660348 MS.gene070688:CDS
AGTAGGAGAGTAGTGGAACT+TGG 0.490518 5.3:-20660790 MS.gene070688:CDS
GGTTTCTGTAGTATATTGGC+TGG 0.490990 5.3:-20660886 MS.gene070688:CDS
AGAAATTTAGACACATAATG+AGG 0.491899 5.3:-20662448 MS.gene070688:CDS
CGGCTCACAACTCCTGGAGT+TGG 0.492387 5.3:+20660925 None:intergenic
ACCCAAGAGAATTACGTTCA+TGG 0.493944 5.3:-20665025 MS.gene070688:CDS
AATGTTTGAACTCGGTACAT+TGG 0.497178 5.3:+20661282 None:intergenic
ATACCCCACTGTAAAGGATA+AGG 0.497905 5.3:+20661166 None:intergenic
TGTTTGTTGAAGCATCTTCG+AGG 0.502276 5.3:-20661532 MS.gene070688:intron
AATCATGGTCATAGTGTCAC+TGG 0.503235 5.3:-20661116 MS.gene070688:CDS
CGCTCTTATGTCCATGAACA+TGG 0.503641 5.3:-20660132 MS.gene070688:CDS
ATTGGTTCTATTATTCACTC+TGG 0.507159 5.3:-20661715 MS.gene070688:intron
ATTTGGAGATGGTGGATGGA+AGG 0.508885 5.3:-20664607 MS.gene070688:CDS
TTGAATTTGGAGATGGTGGA+TGG 0.508948 5.3:-20664611 MS.gene070688:CDS
TGCTATACTGTGTTTCATGT+GGG 0.512633 5.3:-20660535 MS.gene070688:CDS
CCAGCTTGTGATTGTGAAGC+TGG 0.515519 5.3:+20664855 None:intergenic
AATTCAAGGCCTCCAACTCC+AGG 0.519913 5.3:-20660937 MS.gene070688:CDS
CTTGTGATTGTGAAGCTGGT+TGG 0.522340 5.3:+20664859 None:intergenic
ATGCATTGTCTACTGCTGCA+TGG 0.523315 5.3:-20661198 MS.gene070688:CDS
CAGCACTATATATCATTGGC+TGG 0.524188 5.3:-20662972 MS.gene070688:CDS
TGGATCTCAACACCCCTAGT+TGG 0.524426 5.3:+20664879 None:intergenic
ACATCTGTTCCACCCATGAC+TGG 0.524518 5.3:+20662918 None:intergenic
CTGCTATACTGTGTTTCATG+TGG 0.524664 5.3:-20660536 MS.gene070688:CDS
TGCATTGTCTACTGCTGCAT+GGG 0.526144 5.3:-20661197 MS.gene070688:CDS
CTTCAGGACTTCCATAATCA+TGG 0.529196 5.3:-20661131 MS.gene070688:CDS
AATTCCTTATCCTTTACAGT+GGG 0.530316 5.3:-20661170 MS.gene070688:CDS
CTACTGGACAACACTGTCCC+GGG 0.530706 5.3:-20660086 MS.gene070688:CDS
GCATTTATAATGACTAAAGC+AGG 0.530879 5.3:+20662686 None:intergenic
GGAGTTGAATTTGGAGATGG+TGG 0.531975 5.3:-20664615 MS.gene070688:CDS
AGATAGAGATAGATCCAACT+AGG 0.536250 5.3:-20664893 MS.gene070688:CDS
AGTATATTGGCTGGTCTTTG+GGG 0.537211 5.3:-20660877 MS.gene070688:CDS
TTGTTGAAAATAGGATGGAA+TGG 0.537365 5.3:+20660413 None:intergenic
TCTACTGGACAACACTGTCC+CGG 0.540937 5.3:-20660087 MS.gene070688:CDS
AACCCTCCAATGCAATTCCT+CGG 0.543888 5.3:+20660905 None:intergenic
TCAGGTGAAGCAGGGACTAG+TGG 0.544152 5.3:-20664972 MS.gene070688:CDS
AGCCGAGGAATTGCATTGGA+GGG 0.544530 5.3:-20660907 MS.gene070688:CDS
CAAGTTATTGTTGCGCTCAA+CGG 0.544576 5.3:+20661361 None:intergenic
CCATGCAAGTTTCTTTGGCA+GGG 0.544812 5.3:+20659983 None:intergenic
TTTCATGTGGGCTCTTACCG+TGG 0.545169 5.3:-20660523 MS.gene070688:CDS
CACATAATGAGGGAACTTCA+AGG 0.546339 5.3:-20662437 MS.gene070688:CDS
ATAGGGATACCCCACTGTAA+AGG 0.546733 5.3:+20661160 None:intergenic
CCCAAGAGAATTACGTTCAT+GGG 0.549316 5.3:-20665024 MS.gene070688:CDS
ACCCGACTTCCTTTAGTGCA+AGG 0.549323 5.3:-20662731 MS.gene070688:CDS
CTGATTATTCAGGTGAAGCA+GGG 0.551463 5.3:-20664980 MS.gene070688:CDS
TGCAGTTGCTCCTGTGACAG+AGG 0.552907 5.3:-20664700 MS.gene070688:intron
TCCCTTGCACTAAAGGAAGT+CGG 0.553144 5.3:+20662729 None:intergenic
AAGGTTAATGTGTTTCCAGA+AGG 0.553353 5.3:-20664636 MS.gene070688:CDS
CCCGACTTCCTTTAGTGCAA+GGG 0.555144 5.3:-20662730 MS.gene070688:CDS
GTGCAGTATAGTTGTGATGC+CGG 0.555342 5.3:+20662766 None:intergenic
TGTTTAAGGCCTGAATGGAA+TGG 0.558091 5.3:+20660324 None:intergenic
CACTAAATCCCAAGATACAT+TGG 0.559536 5.3:+20662390 None:intergenic
AGTCCACACTTCAAATCAGA+TGG 0.560565 5.3:+20664582 None:intergenic
TTTGGAGATGGTGGATGGAA+GGG 0.560727 5.3:-20664606 MS.gene070688:CDS
AACTTGCATGGTGTTGCTGT+TGG 0.563081 5.3:-20659971 MS.gene070688:CDS
CTCTCACCATCACCATTCAA+AGG 0.564623 5.3:+20664789 None:intergenic
TCCAAGCAAATACCAGCTTG+TGG 0.564734 5.3:+20661759 None:intergenic
TGTATTAATCCCATTAGTCA+TGG 0.565064 5.3:-20662943 MS.gene070688:CDS
GAGCCGAGGAATTGCATTGG+AGG 0.566036 5.3:-20660908 MS.gene070688:CDS
TGTGGACTTAAAGAAAATCC+GGG 0.567139 5.3:-20664567 MS.gene070688:CDS
GATAGAGATAGATCCAACTA+GGG 0.567963 5.3:-20664892 MS.gene070688:CDS
AGCAGCCAAGGCCTGTGGAA+TGG 0.570357 5.3:+20660557 None:intergenic
AGTTACGGTTTCCCACAAGC+TGG 0.571863 5.3:-20661771 MS.gene070688:CDS
TGTGAGCCGAGGAATTGCAT+TGG 0.574624 5.3:-20660911 MS.gene070688:CDS
CAGTTATCTTGTTCCTTATG+CGG 0.574780 5.3:-20660361 MS.gene070688:CDS
TTAGTCATGGTACCAGTCAT+GGG 0.575195 5.3:-20662930 MS.gene070688:CDS
TGTGACAGAGGAAAAGGATG+AGG 0.575716 5.3:-20664688 MS.gene070688:CDS
ACACAGTATAGCAGCAGCCA+AGG 0.577141 5.3:+20660545 None:intergenic
AGGATGGAATGGACATTCCA+AGG 0.577433 5.3:+20660424 None:intergenic
GCTTGATGTCTATCCTACTC+AGG 0.579268 5.3:-20662367 MS.gene070688:intron
GGTGGCAAGTAGGAGAGTAG+TGG 0.580576 5.3:-20660797 MS.gene070688:CDS
GAAGGAGTTGAATTTGGAGA+TGG 0.582600 5.3:-20664618 MS.gene070688:CDS
CTTATGCGGCAGCGTCAAGT+GGG 0.584023 5.3:-20660347 MS.gene070688:CDS
AGATTGCAGCGAGGCATCCG+CGG 0.585119 5.3:+20660013 None:intergenic
TGGTATTGTTGAAAATAGGA+TGG 0.586767 5.3:+20660408 None:intergenic
ACATCACAAAGGTGGCAAGT+AGG 0.589236 5.3:-20660807 MS.gene070688:CDS
CTTTACCTACAAATGAGAAG+AGG 0.593632 5.3:+20660752 None:intergenic
GGAAAAGGATGAGGAGAATG+TGG 0.596041 5.3:-20664679 MS.gene070688:CDS
GTATAAGACTTGACTCAGGC+TGG 0.598503 5.3:+20660388 None:intergenic
AAACCTACAGCAGCAACCGT+TGG 0.601364 5.3:+20661804 None:intergenic
GTTCATGGGCTAAGAAAACT+GGG 0.602879 5.3:-20665010 MS.gene070688:CDS
TAGGTTAATCAACCCTGTTG+TGG 0.603357 5.3:-20661832 MS.gene070688:CDS
TGATTATGGAAGTCCTGAAG+TGG 0.603711 5.3:+20661134 None:intergenic
GAAATTTAGACACATAATGA+GGG 0.604178 5.3:-20662447 MS.gene070688:CDS
GGACCATCTGATTTGAAGTG+TGG 0.604307 5.3:-20664585 MS.gene070688:CDS
CACAATTAACATCACAAAGG+TGG 0.604324 5.3:-20660815 MS.gene070688:CDS
AGGCCTGTGGAATGGAAGCA+AGG 0.607804 5.3:+20660565 None:intergenic
AAGAACGAGGAGTGTATACA+TGG 0.615795 5.3:-20660055 MS.gene070688:CDS
AGTCGATAGGCCCAATGCCA+CGG 0.617446 5.3:+20660506 None:intergenic
GAATTCCTTATCCTTTACAG+TGG 0.622024 5.3:-20661171 MS.gene070688:CDS
CCCTGCCAAAGAAACTTGCA+TGG 0.625130 5.3:-20659983 MS.gene070688:CDS
CATGGTGGTTACACTGTTGG+TGG 0.626703 5.3:-20660114 MS.gene070688:CDS
GAACATGGTGGTTACACTGT+TGG 0.627072 5.3:-20660117 MS.gene070688:CDS
CCAGCTTCACAATCACAAGC+TGG 0.627986 5.3:-20664855 MS.gene070688:CDS
TGCAGCAGTAGACAATGCAT+CGG 0.629989 5.3:+20661201 None:intergenic
GAGAATGTGGTACATGGTGA+TGG 0.633962 5.3:-20664666 MS.gene070688:CDS
GACCATACTGTAAAGTCGAT+AGG 0.637354 5.3:+20660493 None:intergenic
GCATAAGGAACAAGATAACT+GGG 0.640702 5.3:+20660363 None:intergenic
ATAGCAGCAGCCAAGGCCTG+TGG 0.643514 5.3:+20660552 None:intergenic
AAAACAAACTAACCTAAACC+CGG 0.645422 5.3:+20664549 None:intergenic
GGCAGTATAAGACTTGACTC+AGG 0.653391 5.3:+20660384 None:intergenic
TCAGTAAGAATGTTTGAACT+CGG 0.663142 5.3:+20661274 None:intergenic
GTCATGGTACCAGTCATGGG+TGG 0.663447 5.3:-20662927 MS.gene070688:CDS
GATGAGGAGAATGTGGTACA+TGG 0.665286 5.3:-20664672 MS.gene070688:CDS
ATTCCTTATCCTTTACAGTG+GGG 0.666964 5.3:-20661169 MS.gene070688:CDS
ATATACCATGAAGCATTGCA+GGG 0.667424 5.3:-20661233 MS.gene070688:CDS
ACTCCAGGAGTTGTGAGCCG+AGG 0.668659 5.3:-20660922 MS.gene070688:CDS
CCGTTGGCGCAACCACAACA+GGG 0.681677 5.3:+20661820 None:intergenic
CCGGGAAGTAAACAAGAACG+AGG 0.685706 5.3:-20660068 MS.gene070688:CDS
GAGAGCTGAAGACATTGCCG+CGG 0.710630 5.3:-20660030 MS.gene070688:CDS
GCACACAATTAACATCACAA+AGG 0.716995 5.3:-20660818 MS.gene070688:CDS
ATAGAGATAGATCCAACTAG+GGG 0.726766 5.3:-20664891 MS.gene070688:CDS
GGAATATTCAGATTGCAGCG+AGG 0.745841 5.3:+20660004 None:intergenic
TCTTATGTCCATGAACATGG+TGG 0.757467 5.3:-20660129 MS.gene070688:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATAAAAATAATAATAAT+AGG + chr5.3:20662946-20662965 None:intergenic 0.0%
!! AAAATAATAATAATAGGAAA+AGG + chr5.3:20662940-20662959 None:intergenic 10.0%
!! AACATAAAAAATAGTTATAT+CGG - chr5.3:20661290-20661309 MS.gene070688:CDS 10.0%
!!! AAAAATGAATTATTACTTTT+TGG + chr5.3:20661999-20662018 None:intergenic 10.0%
!!! AAAATGAATTATTACTTTTT+GGG + chr5.3:20661998-20662017 None:intergenic 10.0%
!! AATTACATTTAAATATTTGC+AGG - chr5.3:20663656-20663675 MS.gene070688:intron 15.0%
!! ACATAAAAAATAGTTATATC+GGG - chr5.3:20661291-20661310 MS.gene070688:CDS 15.0%
!! ATAATATAATTCTGCAATTA+TGG + chr5.3:20664339-20664358 None:intergenic 15.0%
!! TTACAAATCACATTAAAATT+TGG - chr5.3:20662513-20662532 MS.gene070688:intron 15.0%
!!! ATCATATTTACATTTTTAGA+TGG - chr5.3:20663972-20663991 MS.gene070688:intron 15.0%
!!! ATTTTGAATTATGTTTCATA+TGG - chr5.3:20660538-20660557 MS.gene070688:CDS 15.0%
!!! ATTTTTTAAAAGAAAAATGC+TGG + chr5.3:20661849-20661868 None:intergenic 15.0%
!!! CAATATGTTATATTTTAGTT+TGG - chr5.3:20660582-20660601 MS.gene070688:CDS 15.0%
!!! TTTGTTTTAATCTAAAAAAC+AGG - chr5.3:20661618-20661637 MS.gene070688:intron 15.0%
!!! TTTTATGAACATTTGAATTT+TGG - chr5.3:20660676-20660695 MS.gene070688:intron 15.0%
!! AAACAACATTGTAGAAATTA+CGG + chr5.3:20662252-20662271 None:intergenic 20.0%
!! AAATATGCAGGATTTAATAA+GGG + chr5.3:20662573-20662592 None:intergenic 20.0%
!! AAATATTTGAACTTCAATTC+AGG + chr5.3:20664386-20664405 None:intergenic 20.0%
!! AAATGAGAAGATAATCAAAT+AGG - chr5.3:20661869-20661888 MS.gene070688:intron 20.0%
!! AATGATATGTATATAGAAAC+TGG + chr5.3:20661909-20661928 None:intergenic 20.0%
!! AATTAACATGATTATGTTCT+TGG - chr5.3:20661965-20661984 MS.gene070688:intron 20.0%
!! ATGATATGTATATAGAAACT+GGG + chr5.3:20661908-20661927 None:intergenic 20.0%
!! GGATATAAATAATTAATCCT+AGG + chr5.3:20662919-20662938 None:intergenic 20.0%
!! GTTCAAATATTTCTTTATAC+AGG - chr5.3:20664394-20664413 MS.gene070688:intron 20.0%
!! TTATAAATGCTCAAGAATAT+CGG - chr5.3:20662369-20662388 MS.gene070688:CDS 20.0%
!!! ATCTTGTTATAGAATAGATT+AGG - chr5.3:20660772-20660791 MS.gene070688:CDS 20.0%
!!! ATTGAACTTTTATCAATAAG+AGG - chr5.3:20663143-20663162 MS.gene070688:intron 20.0%
!!! ATTTTAATGTGATTTGTAAC+AGG + chr5.3:20662512-20662531 None:intergenic 20.0%
!!! TACTTAAAAACTTGTTTAGA+CGG - chr5.3:20664792-20664811 MS.gene070688:intron 20.0%
!!! TTTATTTTTGTAGGAAAAGT+GGG - chr5.3:20664448-20664467 MS.gene070688:intron 20.0%
!!! TTTTAAGTAATACTACAATG+AGG + chr5.3:20664781-20664800 None:intergenic 20.0%
!!! TTTTATTTTTGTAGGAAAAG+TGG - chr5.3:20664447-20664466 MS.gene070688:intron 20.0%
! AACAAGACAAAAAGAAGAAA+TGG + chr5.3:20663494-20663513 None:intergenic 25.0%
! AACTATTTACAATTTGTCGT+AGG - chr5.3:20663191-20663210 MS.gene070688:intron 25.0%
! AGAAATTTAGACACATAATG+AGG - chr5.3:20662594-20662613 MS.gene070688:intron 25.0%
! AGAACATATGAATATGAATG+AGG - chr5.3:20660911-20660930 MS.gene070688:CDS 25.0%
! AGACTAGTATTAGGTAAATA+AGG + chr5.3:20663003-20663022 None:intergenic 25.0%
! AGCAAAAATTCTACTTAAAG+GGG + chr5.3:20661018-20661037 None:intergenic 25.0%
! AGCGTATAATTAAATACAGT+TGG - chr5.3:20664819-20664838 MS.gene070688:CDS 25.0%
! CTGATAAAAGCAACTTAATA+AGG - chr5.3:20661771-20661790 MS.gene070688:CDS 25.0%
! CTTGATTTATAAACATGTCA+CGG - chr5.3:20663427-20663446 MS.gene070688:intron 25.0%
! GAAATATGCAGGATTTAATA+AGG + chr5.3:20662574-20662593 None:intergenic 25.0%
! GAAATTTAGACACATAATGA+GGG - chr5.3:20662595-20662614 MS.gene070688:intron 25.0%
! GAACATATGAATATGAATGA+GGG - chr5.3:20660912-20660931 MS.gene070688:CDS 25.0%
! GAGCAAAAATTCTACTTAAA+GGG + chr5.3:20661019-20661038 None:intergenic 25.0%
! TATTGACAATAAGATGATAC+TGG + chr5.3:20663048-20663067 None:intergenic 25.0%
! TCAATATTCCAATGTATCTT+GGG - chr5.3:20662644-20662663 MS.gene070688:intron 25.0%
! TGAGCAAAAATTCTACTTAA+AGG + chr5.3:20661020-20661039 None:intergenic 25.0%
! TGATACAAAAGACTAGTATT+AGG + chr5.3:20663012-20663031 None:intergenic 25.0%
! TGTTATAGAATAGATTAGGA+AGG - chr5.3:20660776-20660795 MS.gene070688:CDS 25.0%
! TTATCTTAAGATCATTTCCT+AGG - chr5.3:20662899-20662918 MS.gene070688:intron 25.0%
! TTCAATATTCCAATGTATCT+TGG - chr5.3:20662643-20662662 MS.gene070688:intron 25.0%
! TTTAAAAGAAAAATGCTGGT+TGG + chr5.3:20661845-20661864 None:intergenic 25.0%
!! AACACGAGAAAAAAATGTTT+TGG + chr5.3:20662738-20662757 None:intergenic 25.0%
!! TATAAGATGTCTAGAATTCA+AGG - chr5.3:20660945-20660964 MS.gene070688:CDS 25.0%
!! TTATCTGAATAGTTTTCTCA+TGG - chr5.3:20663383-20663402 MS.gene070688:intron 25.0%
!! TTTCTGTTTGTTAATGTAGT+AGG + chr5.3:20662417-20662436 None:intergenic 25.0%
!!! ATTTTTTTCTCGTGTTGAAT+TGG - chr5.3:20662742-20662761 MS.gene070688:CDS 25.0%
!!! GAGGATTTATTTCTAGATAA+AGG + chr5.3:20661135-20661154 None:intergenic 25.0%
!!! GATATTACTCTAGAATATCT+TGG - chr5.3:20662849-20662868 MS.gene070688:intron 25.0%
!!! GGAAACCATTTTTTTTTCTT+CGG + chr5.3:20662982-20663001 None:intergenic 25.0%
!!! TCTAAATTTCTGAAATATGC+AGG + chr5.3:20662585-20662604 None:intergenic 25.0%
!!! TGGTTTAACTTGAATTTATG+CGG - chr5.3:20660641-20660660 MS.gene070688:intron 25.0%
!!! TTTATTTCTAGATAAAGGCT+TGG + chr5.3:20661130-20661149 None:intergenic 25.0%
AAAACAAACTAACCTAAACC+CGG + chr5.3:20660496-20660515 None:intergenic 30.0%
AAGTAATAGTATTCTCGACT+AGG + chr5.3:20661486-20661505 None:intergenic 30.0%
AATAGAACCAATGCAATTTG+TGG + chr5.3:20663319-20663338 None:intergenic 30.0%
AATTCCTTATCCTTTACAGT+GGG - chr5.3:20663872-20663891 MS.gene070688:intron 30.0%
AGGATGACATGTATATTGTT+TGG - chr5.3:20660796-20660815 MS.gene070688:CDS 30.0%
ATAGAAACTGGGAAAAATCA+GGG + chr5.3:20661897-20661916 None:intergenic 30.0%
ATCGACTAGAGAGTAATAAA+TGG + chr5.3:20662169-20662188 None:intergenic 30.0%
ATGATAATTGATCAGAGACA+TGG + chr5.3:20661563-20661582 None:intergenic 30.0%
CAGCATAAATTCGAAATAAG+TGG + chr5.3:20663554-20663573 None:intergenic 30.0%
CATGTATATTGTTTGGATTC+TGG - chr5.3:20660803-20660822 MS.gene070688:CDS 30.0%
CTAGAACTCAAATCAAGTAA+TGG + chr5.3:20660837-20660856 None:intergenic 30.0%
CTATATAGACAGGATTCAAA+GGG + chr5.3:20661422-20661441 None:intergenic 30.0%
CTTAATTCATCAAACACTCA+AGG - chr5.3:20662439-20662458 MS.gene070688:CDS 30.0%
CTTACAGCACTATATATCAT+TGG - chr5.3:20662066-20662085 MS.gene070688:intron 30.0%
CTTTGAATCCTGTCTATATA+GGG - chr5.3:20661421-20661440 MS.gene070688:intron 30.0%
GAGAATATATTCAAACGAAC+AGG + chr5.3:20662546-20662565 None:intergenic 30.0%
GCAGTATCTCTTATCTATTA+TGG - chr5.3:20662043-20662062 MS.gene070688:intron 30.0%
GCATTTATAATGACTAAAGC+AGG + chr5.3:20662359-20662378 None:intergenic 30.0%
GGTTTGAATTGAAAGTAGTT+TGG - chr5.3:20660621-20660640 MS.gene070688:intron 30.0%
TAAGCAATGTGAATTGAATG+TGG - chr5.3:20660719-20660738 MS.gene070688:intron 30.0%
TACATTATTCTGATGACAGA+AGG - chr5.3:20662217-20662236 MS.gene070688:intron 30.0%
TATAGAAACTGGGAAAAATC+AGG + chr5.3:20661898-20661917 None:intergenic 30.0%
TATCATGTGTCTCTTTATCT+CGG + chr5.3:20662793-20662812 None:intergenic 30.0%
TCAGTAAGAATGTTTGAACT+CGG + chr5.3:20663771-20663790 None:intergenic 30.0%
TGCAAAGAATTCATAAGCAA+TGG + chr5.3:20660885-20660904 None:intergenic 30.0%
TGGTATTGTTGAAAATAGGA+TGG + chr5.3:20664637-20664656 None:intergenic 30.0%
TGTATTAATCCCATTAGTCA+TGG - chr5.3:20662099-20662118 MS.gene070688:intron 30.0%
TTGTATTTGCATTGTGGATT+CGG - chr5.3:20661266-20661285 MS.gene070688:CDS 30.0%
TTGTTGAAAATAGGATGGAA+TGG + chr5.3:20664632-20664651 None:intergenic 30.0%
! AAAATCAAGCTGACAAGTTT+TGG + chr5.3:20664882-20664901 None:intergenic 30.0%
! AAACTTTTTGTTACCTGAGT+AGG + chr5.3:20662691-20662710 None:intergenic 30.0%
! ATTATGAAAGTACAGAAGTG+AGG - chr5.3:20661535-20661554 MS.gene070688:intron 30.0%
! TTATGAAAGTACAGAAGTGA+GGG - chr5.3:20661536-20661555 MS.gene070688:intron 30.0%
! TTTGAACCTTTTCATCATAG+AGG - chr5.3:20660103-20660122 MS.gene070688:CDS 30.0%
!! AATATCTTGGTTTGTCCATT+AGG - chr5.3:20662862-20662881 MS.gene070688:intron 30.0%
!! ATATCTTGGTTTGTCCATTA+GGG - chr5.3:20662863-20662882 MS.gene070688:intron 30.0%
!! ATTGGTTCTATTATTCACTC+TGG - chr5.3:20663327-20663346 MS.gene070688:intron 30.0%
!! CAACTTGAAAACAGTTTTAG+AGG + chr5.3:20661594-20661613 None:intergenic 30.0%
!! GATATTCTAGAGTAATATCG+AGG + chr5.3:20662848-20662867 None:intergenic 30.0%
!! TCTACAATGTTGTTTCTTTC+CGG - chr5.3:20662257-20662276 MS.gene070688:intron 30.0%
!! TTAGTTTGGAATGCTAGTTT+TGG - chr5.3:20660596-20660615 MS.gene070688:intron 30.0%
!!! AAAATGTTTTGGTGAACACA+AGG + chr5.3:20662727-20662746 None:intergenic 30.0%
!!! AAGTTGCTTTTATCAGTGAA+TGG + chr5.3:20661767-20661786 None:intergenic 30.0%
!!! ACCATTTTTTTTTCTTCGGA+AGG + chr5.3:20662978-20662997 None:intergenic 30.0%
!!! CCATTTTTTTTTCTTCGGAA+GGG + chr5.3:20662977-20662996 None:intergenic 30.0%
!!! TAACCAGTTTTTGGAACAAA+AGG + chr5.3:20659995-20660014 None:intergenic 30.0%
!!! TGTTTTCGTTGTTTTTCTGT+TGG - chr5.3:20660510-20660529 MS.gene070688:CDS 30.0%
AAATACAATTGAGGCTGCAT+CGG + chr5.3:20661254-20661273 None:intergenic 35.0%
AAGGTTAATGTGTTTCCAGA+AGG - chr5.3:20660406-20660425 MS.gene070688:CDS 35.0%
AAGTCCTGAAGTGGAAAATA+GGG + chr5.3:20663902-20663921 None:intergenic 35.0%
AAGTTATCTAAGTCGTGTTG+AGG + chr5.3:20661515-20661534 None:intergenic 35.0%
AATGTTTGAACTCGGTACAT+TGG + chr5.3:20663763-20663782 None:intergenic 35.0%
AATTCTGCAATTATGGACGT+TGG + chr5.3:20664332-20664351 None:intergenic 35.0%
ACTATACTGCACTCTTACTT+TGG - chr5.3:20662287-20662306 MS.gene070688:intron 35.0%
ACTTCTTTCCCTATATAGAC+AGG + chr5.3:20661432-20661451 None:intergenic 35.0%
AGATAGAGATAGATCCAACT+AGG - chr5.3:20660149-20660168 MS.gene070688:CDS 35.0%
AGATTGAAAACTGACCCTAA+TGG + chr5.3:20662880-20662899 None:intergenic 35.0%
AGGCTGGTATTGTTGAAAAT+AGG + chr5.3:20664641-20664660 None:intergenic 35.0%
ATAAGTTCCAACCTGCAAAA+AGG + chr5.3:20664064-20664083 None:intergenic 35.0%
ATAGAGATAGATCCAACTAG+GGG - chr5.3:20660151-20660170 MS.gene070688:CDS 35.0%
ATGGAATGAGCTTATCATGT+TGG + chr5.3:20660990-20661009 None:intergenic 35.0%
ATGTTTGAACTCGGTACATT+GGG + chr5.3:20663762-20663781 None:intergenic 35.0%
ATTCCTTATCCTTTACAGTG+GGG - chr5.3:20663873-20663892 MS.gene070688:intron 35.0%
CAATGTATCTTGGGATTTAG+TGG - chr5.3:20662653-20662672 MS.gene070688:intron 35.0%
CACAATTAACATCACAAAGG+TGG - chr5.3:20664227-20664246 MS.gene070688:intron 35.0%
CACTAAATCCCAAGATACAT+TGG + chr5.3:20662655-20662674 None:intergenic 35.0%
CAGTTATCTTGTTCCTTATG+CGG - chr5.3:20664681-20664700 MS.gene070688:CDS 35.0%
CCACAATGCAAATACAATTG+AGG + chr5.3:20661263-20661282 None:intergenic 35.0%
CCCTTCCGAAGAAAAAAAAA+TGG - chr5.3:20662974-20662993 MS.gene070688:CDS 35.0%
CCTATATAGACAGGATTCAA+AGG + chr5.3:20661423-20661442 None:intergenic 35.0%
CCTCAATTGTATTTGCATTG+TGG - chr5.3:20661260-20661279 MS.gene070688:CDS 35.0%
CCTTTGAATCCTGTCTATAT+AGG - chr5.3:20661420-20661439 MS.gene070688:intron 35.0%
CGACATGACTTACTTGTTTA+AGG + chr5.3:20664735-20664754 None:intergenic 35.0%
CTTAAAGAAAATCCGGGTTT+AGG - chr5.3:20660481-20660500 MS.gene070688:CDS 35.0%
CTTTACCTACAAATGAGAAG+AGG + chr5.3:20664293-20664312 None:intergenic 35.0%
GAATTCCTTATCCTTTACAG+TGG - chr5.3:20663871-20663890 MS.gene070688:intron 35.0%
GATAGAGATAGATCCAACTA+GGG - chr5.3:20660150-20660169 MS.gene070688:CDS 35.0%
GCACACAATTAACATCACAA+AGG - chr5.3:20664224-20664243 MS.gene070688:intron 35.0%
GCATAAGGAACAAGATAACT+GGG + chr5.3:20664682-20664701 None:intergenic 35.0%
GTAGGTAAAGTAACAACACT+TGG - chr5.3:20664303-20664322 MS.gene070688:intron 35.0%
GTGTGGACTTAAAGAAAATC+CGG - chr5.3:20660474-20660493 MS.gene070688:CDS 35.0%
GTTGGATCTATCTCTATCTT+AGG + chr5.3:20660148-20660167 None:intergenic 35.0%
GTTGTGGGACATTAGATAAA+AGG + chr5.3:20663101-20663120 None:intergenic 35.0%
TAGAAACTGGGAAAAATCAG+GGG + chr5.3:20661896-20661915 None:intergenic 35.0%
TCTACTTAAAGGGGAAAGAA+TGG + chr5.3:20661009-20661028 None:intergenic 35.0%
TGAACTTCAATTCAGGTGTT+AGG + chr5.3:20664379-20664398 None:intergenic 35.0%
TGACACTATGACCATGATTA+TGG + chr5.3:20663925-20663944 None:intergenic 35.0%
TGCTATACTGTGTTTCATGT+GGG - chr5.3:20664507-20664526 MS.gene070688:intron 35.0%
TGGAATGAGCTTATCATGTT+GGG + chr5.3:20660989-20661008 None:intergenic 35.0%
TGTGGACTTAAAGAAAATCC+GGG - chr5.3:20660475-20660494 MS.gene070688:CDS 35.0%
TGTGGTTAACTCTGTATGTT+TGG - chr5.3:20660737-20660756 MS.gene070688:intron 35.0%
TTCAGGAACATGACAATTGT+CGG - chr5.3:20664583-20664602 MS.gene070688:CDS 35.0%
TTGATCCTCTTCTCATTTGT+AGG - chr5.3:20664285-20664304 MS.gene070688:intron 35.0%
TTTCCAGAAGGAGTTGAATT+TGG - chr5.3:20660418-20660437 MS.gene070688:CDS 35.0%
! AAAACTGGTTTAAGAGGGAA+TGG - chr5.3:20660277-20660296 MS.gene070688:intron 35.0%
! AGAGGAAAACTGGTTTAAGA+GGG - chr5.3:20660272-20660291 MS.gene070688:intron 35.0%
! ATTTCTAGATAAAGGCTTGG+AGG + chr5.3:20661127-20661146 None:intergenic 35.0%
! CATTATTTGAAACCCTACAC+GGG - chr5.3:20661335-20661354 MS.gene070688:CDS 35.0%
! CCATTATTTGAAACCCTACA+CGG - chr5.3:20661334-20661353 MS.gene070688:CDS 35.0%
! CGTCACTTCAAGTTAATTCA+AGG - chr5.3:20664091-20664110 MS.gene070688:intron 35.0%
! CTTCAAGGTGCTATAATTGT+TGG - chr5.3:20662620-20662639 MS.gene070688:intron 35.0%
! CTTTTCATCATAGAGGAAGA+GGG - chr5.3:20660110-20660129 MS.gene070688:CDS 35.0%
! TTACTTGTTTAAGGCCTGAA+TGG + chr5.3:20664726-20664745 None:intergenic 35.0%
!! ATATACCATGAAGCATTGCA+GGG - chr5.3:20663809-20663828 MS.gene070688:intron 35.0%
!! ATTGCTTTTGCTGAAGTTGT+GGG + chr5.3:20663116-20663135 None:intergenic 35.0%
!! GGGTTTGTTTCTGATTATTC+AGG - chr5.3:20660052-20660071 MS.gene070688:CDS 35.0%
!! TAGTATATTGGCTGGTCTTT+GGG - chr5.3:20664164-20664183 MS.gene070688:intron 35.0%
!!! CTTGAAAACAGTTTTAGAGG+TGG + chr5.3:20661591-20661610 None:intergenic 35.0%
!!! TTTGGAATGCTAGTTTTGGT+TGG - chr5.3:20660600-20660619 MS.gene070688:intron 35.0%
AACACTTGCAGTCATCTCAT+TGG + chr5.3:20661732-20661751 None:intergenic 40.0%
AATCATGGTCATAGTGTCAC+TGG - chr5.3:20663926-20663945 MS.gene070688:intron 40.0%
ACCCAAGAGAATTACGTTCA+TGG - chr5.3:20660017-20660036 MS.gene070688:CDS 40.0%
AGAAACTGGGAAAAATCAGG+GGG + chr5.3:20661895-20661914 None:intergenic 40.0%
AGTCCACACTTCAAATCAGA+TGG + chr5.3:20660463-20660482 None:intergenic 40.0%
ATAACTGAAGAACCCTGCAT+TGG + chr5.3:20663367-20663386 None:intergenic 40.0%
ATACCCCACTGTAAAGGATA+AGG + chr5.3:20663879-20663898 None:intergenic 40.0%
ATGACTGGTACCATGACTAA+TGG + chr5.3:20662112-20662131 None:intergenic 40.0%
ATGGTCCATGACTGTGATTT+AGG + chr5.3:20661318-20661337 None:intergenic 40.0%
ATGTGTCTCTTTATCTCGGA+TGG + chr5.3:20662789-20662808 None:intergenic 40.0%
ATTAGTCATGGTACCAGTCA+TGG - chr5.3:20662111-20662130 MS.gene070688:intron 40.0%
CAACACCATGCAAGTTTCTT+TGG + chr5.3:20665067-20665086 None:intergenic 40.0%
CAAGTTATTGTTGCGCTCAA+CGG + chr5.3:20663684-20663703 None:intergenic 40.0%
CACATAATGAGGGAACTTCA+AGG - chr5.3:20662605-20662624 MS.gene070688:intron 40.0%
CACTGTTCCACAAATTGCAT+TGG - chr5.3:20663309-20663328 MS.gene070688:intron 40.0%
CAGCACTATATATCATTGGC+TGG - chr5.3:20662070-20662089 MS.gene070688:intron 40.0%
CCCAAGAGAATTACGTTCAT+GGG - chr5.3:20660018-20660037 MS.gene070688:CDS 40.0%
CCCATGAACGTAATTCTCTT+GGG + chr5.3:20660021-20660040 None:intergenic 40.0%
CCGTGTAGGGTTTCAAATAA+TGG + chr5.3:20661337-20661356 None:intergenic 40.0%
CCTCTTCCTCTATGATGAAA+AGG + chr5.3:20660112-20660131 None:intergenic 40.0%
CGCATAAGGAACAAGATAAC+TGG + chr5.3:20664683-20664702 None:intergenic 40.0%
CTGATTATTCAGGTGAAGCA+GGG - chr5.3:20660062-20660081 MS.gene070688:CDS 40.0%
CTGCTATACTGTGTTTCATG+TGG - chr5.3:20664506-20664525 MS.gene070688:intron 40.0%
CTTCAGGACTTCCATAATCA+TGG - chr5.3:20663911-20663930 MS.gene070688:intron 40.0%
CTTCGAGGAATATCTATCTC+TGG - chr5.3:20663525-20663544 MS.gene070688:intron 40.0%
GAAGGAGTTGAATTTGGAGA+TGG - chr5.3:20660424-20660443 MS.gene070688:CDS 40.0%
GAAGTCCTGAAGTGGAAAAT+AGG + chr5.3:20663903-20663922 None:intergenic 40.0%
GACCATACTGTAAAGTCGAT+AGG + chr5.3:20664552-20664571 None:intergenic 40.0%
GAGATGACTGCAAGTGTTTA+TGG - chr5.3:20661734-20661753 MS.gene070688:CDS 40.0%
GCAACTAGAATCGAACTTGT+TGG + chr5.3:20661390-20661409 None:intergenic 40.0%
GCCTTGTCAAGTCAGATTAT+TGG - chr5.3:20661357-20661376 MS.gene070688:CDS 40.0%
GCTTCGGAATCATATTGAAG+TGG + chr5.3:20661157-20661176 None:intergenic 40.0%
GGAGGGTTTCTGTAGTATAT+TGG - chr5.3:20664152-20664171 MS.gene070688:intron 40.0%
GGTGCTAATGTGAATGGTAT+TGG - chr5.3:20660298-20660317 MS.gene070688:intron 40.0%
GGTTTAGCGTTCTTCAGTTA+CGG - chr5.3:20663256-20663275 MS.gene070688:intron 40.0%
GGTTTCTGTAGTATATTGGC+TGG - chr5.3:20664156-20664175 MS.gene070688:intron 40.0%
TAGGTTAATCAACCCTGTTG+TGG - chr5.3:20663210-20663229 MS.gene070688:intron 40.0%
TCACCATTCAAAGGCAAAAC+AGG + chr5.3:20660247-20660266 None:intergenic 40.0%
TCGGAATCATATTGAAGTGG+AGG + chr5.3:20661154-20661173 None:intergenic 40.0%
TCTCCAAATTCAACTCCTTC+TGG + chr5.3:20660424-20660443 None:intergenic 40.0%
TCTGATTATTCAGGTGAAGC+AGG - chr5.3:20660061-20660080 MS.gene070688:CDS 40.0%
TCTTATGTCCATGAACATGG+TGG - chr5.3:20664913-20664932 MS.gene070688:CDS 40.0%
TGACTGGTACCATGACTAAT+GGG + chr5.3:20662111-20662130 None:intergenic 40.0%
TGATTATGGAAGTCCTGAAG+TGG + chr5.3:20663911-20663930 None:intergenic 40.0%
TGGTGAACACAAGGAAGATA+TGG + chr5.3:20662718-20662737 None:intergenic 40.0%
TTAACCAAAACTCTCCGCAA+TGG + chr5.3:20661225-20661244 None:intergenic 40.0%
TTAGTCATGGTACCAGTCAT+GGG - chr5.3:20662112-20662131 MS.gene070688:intron 40.0%
TTCTGTCAAAGTCGTTGAAC+CGG + chr5.3:20664199-20664218 None:intergenic 40.0%
! AAAGCAAGTATCGCATTCAG+TGG - chr5.3:20664007-20664026 MS.gene070688:intron 40.0%
! AAGAACGAGGAGTGTATACA+TGG - chr5.3:20664987-20665006 MS.gene070688:CDS 40.0%
! ACAATCACAAGCTGGTGTTT+TGG - chr5.3:20660195-20660214 MS.gene070688:intron 40.0%
! ACTGGTTGCTTCTGTTGATT+CGG - chr5.3:20663944-20663963 MS.gene070688:intron 40.0%
! CCTTTTCATCATAGAGGAAG+AGG - chr5.3:20660109-20660128 MS.gene070688:CDS 40.0%
! CGAAGCCGAGTTTAAAATAG+CGG - chr5.3:20661171-20661190 MS.gene070688:CDS 40.0%
! GAACCTGTTTTGCCTTTGAA+TGG - chr5.3:20660241-20660260 MS.gene070688:intron 40.0%
! GAGAGGAAAACTGGTTTAAG+AGG - chr5.3:20660271-20660290 MS.gene070688:intron 40.0%
! GCACCTTTTGTTCCAAAAAC+TGG - chr5.3:20659989-20660008 MS.gene070688:CDS 40.0%
! GCCAATAATCTGACTTGACA+AGG + chr5.3:20661361-20661380 None:intergenic 40.0%
! GCTAATGTGAATGGTATTGG+TGG - chr5.3:20660301-20660320 MS.gene070688:intron 40.0%
! GGTTTATCCTTTTTGCAGGT+TGG - chr5.3:20664054-20664073 MS.gene070688:intron 40.0%
! GTATCCCTATTTTCCACTTC+AGG - chr5.3:20663895-20663914 MS.gene070688:intron 40.0%
! GTTCATGGGCTAAGAAAACT+GGG - chr5.3:20660032-20660051 MS.gene070688:CDS 40.0%
! GTTTTGCCTTTGAATGGTGA+TGG - chr5.3:20660247-20660266 MS.gene070688:intron 40.0%
! TGTTTAAGGCCTGAATGGAA+TGG + chr5.3:20664721-20664740 None:intergenic 40.0%
! TGTTTGTTGAAGCATCTTCG+AGG - chr5.3:20663510-20663529 MS.gene070688:intron 40.0%
! TTGCATCCCTTTTAACAGCT+GGG - chr5.3:20663709-20663728 MS.gene070688:intron 40.0%
! TTTGCATCCCTTTTAACAGC+TGG - chr5.3:20663708-20663727 MS.gene070688:intron 40.0%
!! ACATGGTGATGGTGAAGTTA+AGG - chr5.3:20660387-20660406 MS.gene070688:CDS 40.0%
!! AGTATATTGGCTGGTCTTTG+GGG - chr5.3:20664165-20664184 MS.gene070688:intron 40.0%
!! CATATACCATGAAGCATTGC+AGG - chr5.3:20663808-20663827 MS.gene070688:intron 40.0%
!! CATTGCTTTTGCTGAAGTTG+TGG + chr5.3:20663117-20663136 None:intergenic 40.0%
!! CGCTATTTTAAACTCGGCTT+CGG + chr5.3:20661173-20661192 None:intergenic 40.0%
!! CTTGGGTTGTAACCAGTTTT+TGG + chr5.3:20660004-20660023 None:intergenic 40.0%
!! GAATCGAACTTGTTGGTTTC+AGG + chr5.3:20661383-20661402 None:intergenic 40.0%
!! GGAACAAAAGGTGCAACTTT+TGG + chr5.3:20659983-20660002 None:intergenic 40.0%
!! GTAGTATATTGGCTGGTCTT+TGG - chr5.3:20664163-20664182 MS.gene070688:intron 40.0%
!! GTGAATGGTATTGGTGGTAA+TGG - chr5.3:20660307-20660326 MS.gene070688:intron 40.0%
!! TTGAATTTGGAGATGGTGGA+TGG - chr5.3:20660431-20660450 MS.gene070688:CDS 40.0%
!!! CACTGGTTTATCCTTTTTGC+AGG - chr5.3:20664050-20664069 MS.gene070688:intron 40.0%
AACCCTCCAATGCAATTCCT+CGG + chr5.3:20664140-20664159 None:intergenic 45.0%
ACATCACAAAGGTGGCAAGT+AGG - chr5.3:20664235-20664254 MS.gene070688:intron 45.0%
ACCATGCAAGTTTCTTTGGC+AGG + chr5.3:20665063-20665082 None:intergenic 45.0%
AGACATGGCAAAACTCATGC+AGG + chr5.3:20661067-20661086 None:intergenic 45.0%
AGGATGGAATGGACATTCCA+AGG + chr5.3:20664621-20664640 None:intergenic 45.0%
AGTCATGCAGTACCAATGCA+GGG - chr5.3:20663352-20663371 MS.gene070688:intron 45.0%
ATACACCCCCAGCTGTTAAA+AGG + chr5.3:20663719-20663738 None:intergenic 45.0%
ATAGGGATACCCCACTGTAA+AGG + chr5.3:20663885-20663904 None:intergenic 45.0%
ATCAAGACTCTGAGTCACAC+TGG - chr5.3:20664033-20664052 MS.gene070688:intron 45.0%
ATGCATTGTCTACTGCTGCA+TGG - chr5.3:20663844-20663863 MS.gene070688:intron 45.0%
CAGTGTAACCACCATGTTCA+TGG + chr5.3:20664924-20664943 None:intergenic 45.0%
CCAAGCAAATACCAGCTTGT+GGG + chr5.3:20663285-20663304 None:intergenic 45.0%
CCATGCAAGTTTCTTTGGCA+GGG + chr5.3:20665062-20665081 None:intergenic 45.0%
CGCTCTTATGTCCATGAACA+TGG - chr5.3:20664910-20664929 MS.gene070688:CDS 45.0%
CGTTGAGCGCAACAATAACT+TGG - chr5.3:20663682-20663701 MS.gene070688:intron 45.0%
CTCTCACCATCACCATTCAA+AGG + chr5.3:20660256-20660275 None:intergenic 45.0%
CTTGTGATTGTGAAGCTGGT+TGG + chr5.3:20660186-20660205 None:intergenic 45.0%
GAACATGGTGGTTACACTGT+TGG - chr5.3:20664925-20664944 MS.gene070688:CDS 45.0%
GACATGGCAAAACTCATGCA+GGG + chr5.3:20661066-20661085 None:intergenic 45.0%
GAGAATGTGGTACATGGTGA+TGG - chr5.3:20660376-20660395 MS.gene070688:CDS 45.0%
GATGAGGAGAATGTGGTACA+TGG - chr5.3:20660370-20660389 MS.gene070688:CDS 45.0%
GCCCATGAACGTAATTCTCT+TGG + chr5.3:20660022-20660041 None:intergenic 45.0%
GCTTGATGTCTATCCTACTC+AGG - chr5.3:20662675-20662694 MS.gene070688:CDS 45.0%
GGAAAAGGATGAGGAGAATG+TGG - chr5.3:20660363-20660382 MS.gene070688:CDS 45.0%
GGAATATTCAGATTGCAGCG+AGG + chr5.3:20665041-20665060 None:intergenic 45.0%
GGAGTTGAATTTGGAGATGG+TGG - chr5.3:20660427-20660446 MS.gene070688:CDS 45.0%
GGCAGTATAAGACTTGACTC+AGG + chr5.3:20664661-20664680 None:intergenic 45.0%
GTATAAGACTTGACTCAGGC+TGG + chr5.3:20664657-20664676 None:intergenic 45.0%
GTGCAGTATAGTTGTGATGC+CGG + chr5.3:20662279-20662298 None:intergenic 45.0%
TACACCCCCAGCTGTTAAAA+GGG + chr5.3:20663718-20663737 None:intergenic 45.0%
TCCAAGCAAATACCAGCTTG+TGG + chr5.3:20663286-20663305 None:intergenic 45.0%
TCCCTTGCACTAAAGGAAGT+CGG + chr5.3:20662316-20662335 None:intergenic 45.0%
TGCAGCAGTAGACAATGCAT+CGG + chr5.3:20663844-20663863 None:intergenic 45.0%
TGCATTGTCTACTGCTGCAT+GGG - chr5.3:20663845-20663864 MS.gene070688:intron 45.0%
TGTGACAGAGGAAAAGGATG+AGG - chr5.3:20660354-20660373 MS.gene070688:CDS 45.0%
! AGATAAAGGCTTGGAGGTGT+TGG + chr5.3:20661121-20661140 None:intergenic 45.0%
! ATGGTCAATCAGCTAGCTTC+AGG - chr5.3:20664566-20664585 MS.gene070688:CDS 45.0%
! CCTCGTTCTTGTTTACTTCC+CGG + chr5.3:20664977-20664996 None:intergenic 45.0%
! CGAGTTTAAAATAGCGGTCG+CGG - chr5.3:20661177-20661196 MS.gene070688:CDS 45.0%
! CGTTCATGGGCTAAGAAAAC+TGG - chr5.3:20660031-20660050 MS.gene070688:CDS 45.0%
! CTCGTTCTTGTTTACTTCCC+GGG + chr5.3:20664976-20664995 None:intergenic 45.0%
! GGACCATCTGATTTGAAGTG+TGG - chr5.3:20660457-20660476 MS.gene070688:CDS 45.0%
! GGGAATGGTGCTAATGTGAA+TGG - chr5.3:20660292-20660311 MS.gene070688:intron 45.0%
! GTTTTGCCATGTCTGAATGC+TGG - chr5.3:20661073-20661092 MS.gene070688:intron 45.0%
! TCATCCTTTTCCTCTGTCAC+AGG + chr5.3:20660355-20660374 None:intergenic 45.0%
! TGCATCCCTTTTAACAGCTG+GGG - chr5.3:20663710-20663729 MS.gene070688:intron 45.0%
!! AACTTGCATGGTGTTGCTGT+TGG - chr5.3:20665071-20665090 MS.gene070688:CDS 45.0%
!! ACTGTTGGTGGCATTTCTAC+TGG - chr5.3:20664940-20664959 MS.gene070688:CDS 45.0%
!! ATCACAAGCTGGTGTTTTGG+AGG - chr5.3:20660198-20660217 MS.gene070688:intron 45.0%
!! ATTTGGAGATGGTGGATGGA+AGG - chr5.3:20660435-20660454 MS.gene070688:CDS 45.0%
!! CGCGACCGCTATTTTAAACT+CGG + chr5.3:20661179-20661198 None:intergenic 45.0%
!! CTTTGAATGGTGATGGTGAG+AGG - chr5.3:20660254-20660273 MS.gene070688:intron 45.0%
!! GATAAAGGCTTGGAGGTGTT+GGG + chr5.3:20661120-20661139 None:intergenic 45.0%
!! GGCCTATCGACTTTACAGTA+TGG - chr5.3:20664547-20664566 MS.gene070688:intron 45.0%
!! GGTATTGGTGGTAATGGTCA+TGG - chr5.3:20660313-20660332 MS.gene070688:intron 45.0%
!! TTTGGAGATGGTGGATGGAA+GGG - chr5.3:20660436-20660455 MS.gene070688:CDS 45.0%
!!! GTGTTTTGGAGGAGAATGTG+AGG - chr5.3:20660209-20660228 MS.gene070688:intron 45.0%
!!! TTTTTTATTTTTATTTTTGT+AGG - chr5.3:20664439-20664458 MS.gene070688:intron 5.0%
AAACCTACAGCAGCAACCGT+TGG + chr5.3:20663241-20663260 None:intergenic 50.0%
AACGAGCTCCCTTGCACTAA+AGG + chr5.3:20662323-20662342 None:intergenic 50.0%
AATTCAAGGCCTCCAACTCC+AGG - chr5.3:20664105-20664124 MS.gene070688:intron 50.0%
ACACAGTATAGCAGCAGCCA+AGG + chr5.3:20664500-20664519 None:intergenic 50.0%
ACATCTGTTCCACCCATGAC+TGG + chr5.3:20662127-20662146 None:intergenic 50.0%
ACCCGACTTCCTTTAGTGCA+AGG - chr5.3:20662311-20662330 MS.gene070688:intron 50.0%
AGCCGAGGAATTGCATTGGA+GGG - chr5.3:20664135-20664154 MS.gene070688:intron 50.0%
AGTTACGGTTTCCCACAAGC+TGG - chr5.3:20663271-20663290 MS.gene070688:intron 50.0%
ATCAGCCCTGCAATGCTTCA+TGG + chr5.3:20663817-20663836 None:intergenic 50.0%
CAAAACTCTCCGCAATGGCA+AGG + chr5.3:20661220-20661239 None:intergenic 50.0%
CATGGTGGTTACACTGTTGG+TGG - chr5.3:20664928-20664947 MS.gene070688:CDS 50.0%
CCAGCTTCACAATCACAAGC+TGG - chr5.3:20660187-20660206 MS.gene070688:intron 50.0%
CCAGCTTGTGATTGTGAAGC+TGG + chr5.3:20660190-20660209 None:intergenic 50.0%
CCCACAAGCTGGTATTTGCT+TGG - chr5.3:20663282-20663301 MS.gene070688:intron 50.0%
CCCGACTTCCTTTAGTGCAA+GGG - chr5.3:20662312-20662331 MS.gene070688:intron 50.0%
CCCTGCCAAAGAAACTTGCA+TGG - chr5.3:20665059-20665078 MS.gene070688:CDS 50.0%
CCCTTGCACTAAAGGAAGTC+GGG + chr5.3:20662315-20662334 None:intergenic 50.0%
CCGGGAAGTAAACAAGAACG+AGG - chr5.3:20664974-20664993 MS.gene070688:CDS 50.0%
CGGGTCCTAAATCACAGTCA+TGG - chr5.3:20661310-20661329 MS.gene070688:CDS 50.0%
GAGTCATGCAGTACCAATGC+AGG - chr5.3:20663351-20663370 MS.gene070688:intron 50.0%
TCAAGTGGGCCATTCCATTC+AGG - chr5.3:20664709-20664728 MS.gene070688:intron 50.0%
TCTACTGGACAACACTGTCC+CGG - chr5.3:20664955-20664974 MS.gene070688:CDS 50.0%
TCTCCTTGCTTCCATTCCAC+AGG - chr5.3:20664474-20664493 MS.gene070688:intron 50.0%
TGCTCCTGTGACAGAGGAAA+AGG - chr5.3:20660348-20660367 MS.gene070688:CDS 50.0%
TGGATCTCAACACCCCTAGT+TGG + chr5.3:20660166-20660185 None:intergenic 50.0%
TGTGAGCCGAGGAATTGCAT+TGG - chr5.3:20664131-20664150 MS.gene070688:intron 50.0%
TTTCATGTGGGCTCTTACCG+TGG - chr5.3:20664519-20664538 MS.gene070688:intron 50.0%
! CTTGCCATTGCGGAGAGTTT+TGG - chr5.3:20661218-20661237 MS.gene070688:CDS 50.0%
! GCATCCCTTTTAACAGCTGG+GGG - chr5.3:20663711-20663730 MS.gene070688:intron 50.0%
! GGTGATGGTGAGAGGAAAAC+TGG - chr5.3:20660262-20660281 MS.gene070688:intron 50.0%
AGGCCTGTGGAATGGAAGCA+AGG + chr5.3:20664480-20664499 None:intergenic 55.0%
AGTCGATAGGCCCAATGCCA+CGG + chr5.3:20664539-20664558 None:intergenic 55.0%
ATTCCTCGGCTCACAACTCC+TGG + chr5.3:20664126-20664145 None:intergenic 55.0%
CAATGGCAAGGATCGCGACA+TGG + chr5.3:20661208-20661227 None:intergenic 55.0%
CTACTGGACAACACTGTCCC+GGG - chr5.3:20664956-20664975 MS.gene070688:CDS 55.0%
CTCACAACTCCTGGAGTTGG+AGG + chr5.3:20664117-20664136 None:intergenic 55.0%
CTTATGCGGCAGCGTCAAGT+GGG - chr5.3:20664695-20664714 MS.gene070688:CDS 55.0%
GACTTGACAAGGCCCGTGTA+GGG + chr5.3:20661350-20661369 None:intergenic 55.0%
GAGAGCTGAAGACATTGCCG+CGG - chr5.3:20665012-20665031 MS.gene070688:CDS 55.0%
GAGCCGAGGAATTGCATTGG+AGG - chr5.3:20664134-20664153 MS.gene070688:intron 55.0%
GTCATGGTACCAGTCATGGG+TGG - chr5.3:20662115-20662134 MS.gene070688:intron 55.0%
GTCGGCGTTGCATTGTTCCT+TGG - chr5.3:20664601-20664620 MS.gene070688:CDS 55.0%
TCAGGTGAAGCAGGGACTAG+TGG - chr5.3:20660070-20660089 MS.gene070688:CDS 55.0%
TGACTTGACAAGGCCCGTGT+AGG + chr5.3:20661351-20661370 None:intergenic 55.0%
TGCAGTTGCTCCTGTGACAG+AGG - chr5.3:20660342-20660361 MS.gene070688:CDS 55.0%
TGCTTCCATTCCACAGGCCT+TGG - chr5.3:20664480-20664499 MS.gene070688:intron 55.0%
TGGGCTCTTACCGTGGCATT+GGG - chr5.3:20664526-20664545 MS.gene070688:intron 55.0%
TGTCGCGATCCTTGCCATTG+CGG - chr5.3:20661208-20661227 MS.gene070688:CDS 55.0%
TGTGCGCCAGCATTCAGACA+TGG + chr5.3:20661082-20661101 None:intergenic 55.0%
! GGTGTTGGGAGGGACATACT+TGG + chr5.3:20661106-20661125 None:intergenic 55.0%
!! AAAGGCTTGGAGGTGTTGGG+AGG + chr5.3:20661117-20661136 None:intergenic 55.0%
!! AAGGCTTGGAGGTGTTGGGA+GGG + chr5.3:20661116-20661135 None:intergenic 55.0%
!! GGTCTTTGGGGTTCAGGTAC+CGG - chr5.3:20664177-20664196 MS.gene070688:intron 55.0%
!! TTGGCTGGTCTTTGGGGTTC+AGG - chr5.3:20664171-20664190 MS.gene070688:intron 55.0%
ACCGTTGGCGCAACCACAAC+AGG + chr5.3:20663226-20663245 None:intergenic 60.0%
ACTCCAGGAGTTGTGAGCCG+AGG - chr5.3:20664120-20664139 MS.gene070688:intron 60.0%
AGCAGCCAAGGCCTGTGGAA+TGG + chr5.3:20664488-20664507 None:intergenic 60.0%
ATAGCAGCAGCCAAGGCCTG+TGG + chr5.3:20664493-20664512 None:intergenic 60.0%
CCACTTGACGCTGCCGCATA+AGG + chr5.3:20664697-20664716 None:intergenic 60.0%
CCCTGTTGTGGTTGCGCCAA+CGG - chr5.3:20663222-20663241 MS.gene070688:intron 60.0%
CCGTTGGCGCAACCACAACA+GGG + chr5.3:20663225-20663244 None:intergenic 60.0%
CCTTATGCGGCAGCGTCAAG+TGG - chr5.3:20664694-20664713 MS.gene070688:CDS 60.0%
CGGCTCACAACTCCTGGAGT+TGG + chr5.3:20664120-20664139 None:intergenic 60.0%
GTGGGCTCTTACCGTGGCAT+TGG - chr5.3:20664525-20664544 MS.gene070688:intron 60.0%
! AGATTGCAGCGAGGCATCCG+CGG + chr5.3:20665032-20665051 None:intergenic 60.0%
GCGCCAACGGTTGCTGCTGT+AGG - chr5.3:20663235-20663254 MS.gene070688:intron 65.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 20659962 20665102 20659962 ID=MS.gene070688
chr5.3 mRNA 20659962 20665102 20659962 ID=MS.gene070688.t1;Parent=MS.gene070688
chr5.3 exon 20664796 20665102 20664796 ID=MS.gene070688.t1.exon1;Parent=MS.gene070688.t1
chr5.3 CDS 20664796 20665102 20664796 ID=cds.MS.gene070688.t1;Parent=MS.gene070688.t1
chr5.3 exon 20664562 20664717 20664562 ID=MS.gene070688.t1.exon2;Parent=MS.gene070688.t1
chr5.3 CDS 20664562 20664717 20664562 ID=cds.MS.gene070688.t1;Parent=MS.gene070688.t1
chr5.3 exon 20662920 20663017 20662920 ID=MS.gene070688.t1.exon3;Parent=MS.gene070688.t1
chr5.3 CDS 20662920 20663017 20662920 ID=cds.MS.gene070688.t1;Parent=MS.gene070688.t1
chr5.3 exon 20662658 20662828 20662658 ID=MS.gene070688.t1.exon4;Parent=MS.gene070688.t1
chr5.3 CDS 20662658 20662828 20662658 ID=cds.MS.gene070688.t1;Parent=MS.gene070688.t1
chr5.3 exon 20662368 20662468 20662368 ID=MS.gene070688.t1.exon5;Parent=MS.gene070688.t1
chr5.3 CDS 20662368 20662468 20662368 ID=cds.MS.gene070688.t1;Parent=MS.gene070688.t1
chr5.3 exon 20661716 20661851 20661716 ID=MS.gene070688.t1.exon6;Parent=MS.gene070688.t1
chr5.3 CDS 20661716 20661851 20661716 ID=cds.MS.gene070688.t1;Parent=MS.gene070688.t1
chr5.3 exon 20661492 20661542 20661492 ID=MS.gene070688.t1.exon7;Parent=MS.gene070688.t1
chr5.3 CDS 20661492 20661542 20661492 ID=cds.MS.gene070688.t1;Parent=MS.gene070688.t1
chr5.3 exon 20661099 20661386 20661099 ID=MS.gene070688.t1.exon8;Parent=MS.gene070688.t1
chr5.3 CDS 20661099 20661386 20661099 ID=cds.MS.gene070688.t1;Parent=MS.gene070688.t1
chr5.3 exon 20660758 20660992 20660758 ID=MS.gene070688.t1.exon9;Parent=MS.gene070688.t1
chr5.3 CDS 20660758 20660992 20660758 ID=cds.MS.gene070688.t1;Parent=MS.gene070688.t1
chr5.3 exon 20660323 20660603 20660323 ID=MS.gene070688.t1.exon10;Parent=MS.gene070688.t1
chr5.3 CDS 20660323 20660603 20660323 ID=cds.MS.gene070688.t1;Parent=MS.gene070688.t1
chr5.3 exon 20659962 20660171 20659962 ID=MS.gene070688.t1.exon11;Parent=MS.gene070688.t1
chr5.3 CDS 20659962 20660171 20659962 ID=cds.MS.gene070688.t1;Parent=MS.gene070688.t1
Gene Sequence

>MS.gene070688

ATGGAAAACAAAGCTGAACCAAAAGTTGCACCTTTTGTTCCAAAAACTGGTTACAACCCAAGAGAATTACGTTCATGGGCTAAGAAAACTGGGTTTGTTTCTGATTATTCAGGTGAAGCAGGGACTAGTGGAAGTGAAAAGTTTGAACCTTTTCATCATAGAGGAAGAGGGTCATCTTCTTCTCCTAAGATAGAGATAGATCCAACTAGGGGTGTTGAGATCCAACCAGCTTCACAATCACAAGCTGGTGTTTTGGAGGAGAATGTGAGGAAAGAGAATGAACCTGTTTTGCCTTTGAATGGTGATGGTGAGAGGAAAACTGGTTTAAGAGGGAATGGTGCTAATGTGAATGGTATTGGTGGTAATGGTCATGGTGTATCTGCAGTTGCTCCTGTGACAGAGGAAAAGGATGAGGAGAATGTGGTACATGGTGATGGTGAAGTTAAGGTTAATGTGTTTCCAGAAGGAGTTGAATTTGGAGATGGTGGATGGAAGGGACCATCTGATTTGAAGTGTGGACTTAAAGAAAATCCGGGTTTAGGTTAGTTTGTTTTCGTTGTTTTTCTGTTGGTTATGATTTTGAATTATGTTTCATATGGTTAATTTGATTCATTAAGTTACAATATGTTATATTTTAGTTTGGAATGCTAGTTTTGGTTGGTTTGAATTGAAAGTAGTTTGGTTTAACTTGAATTTATGCGGAAAAAATTGATGTTTTATGAACATTTGAATTTTGGACTGCATAATATTGTAATTTTAAGCAATGTGAATTGAATGTGGTTAACTCTGTATGTTTGGTTGATGCATATTATCTTGTTATAGAATAGATTAGGAAGGATGACATGTATATTGTTTGGATTCTGGCTCAAATACCATTACTTGATTTGAGTTCTAGTTTATTCACTACTCTTTTTTTTCAACCATTGCTTATGAATTCTTTGCATAGAAGAGAACATATGAATATGAATGAGGGAAAAAGAAGATATAAGATGTCTAGAATTCAAGGAATTAATAAAACTGCTCACCCAACATGATAAGCTCATTCCATTCTTTCCCCTTTAAGTAGAATTTTTGCTCAATAATTAGTTGATCTAACTCTTACCCTGCATGAGTTTTGCCATGTCTGAATGCTGGCGCACAACCAAGTATGTCCCTCCCAACACCTCCAAGCCTTTATCTAGAAATAAATCCTCCACTTCAATATGATTCCGAAGCCGAGTTTAAAATAGCGGTCGCGGTAATTCCATGTCGCGATCCTTGCCATTGCGGAGAGTTTTGGTTAAATGCAACCGATGCAGCCTCAATTGTATTTGCATTGTGGATTCGGCAACATAAAAAATAGTTATATCGGGTCCTAAATCACAGTCATGGACCATTATTTGAAACCCTACACGGGCCTTGTCAAGTCAGATTATTGGCCTGAAACCAACAAGTTCGATTCTAGTTGCAATATGAATCCCTTTGAATCCTGTCTATATAGGGAAAGAAGTTTTGATAGAAAGATCTAGTTGAATCACGAATCCTAGTCGAGAATACTATTACTTGACGTGCCTCAACACGACTTAGATAACTTATTATGAAAGTACAGAAGTGAGGGACCATGTCTCTGATCAATTATCATATTTTCCACCTCTAAAACTGTTTTCAAGTTGTTTTTTTGTTTTAATCTAAAAAACAGGTTTTCAAAATTGTATTGCAGAATAATATTTAAAAAGAGCAAAGCTAGATAGTCATACTTAGTATAAAAAAGTATTGAAATTCATTTGACCAATGAGATGACTGCAAGTGTTTATGGCTTCTAACCATTCACTGATAAAAGCAACTTAATAAGGATGAACACATAAGATTCGTACTATTCGTTTAAACATAATTTGTAATAACCAACCAGCATTTTTCTTTTAAAAAATAAATGAGAAGATAATCAAATAGGCCCCCTGATTTTTCCCAGTTTCTATATACATATCATTGTCTCAACTAACTACTGTCTTGTTATTAACAAGATAAATTAACATGATTATGTTCTTGGTAACTTGCCCAAAAAGTAATAATTCATTTTTACTTACACTTTTGCATCTTCAATTGCAGTATCTCTTATCTATTATGGCTTACAGCACTATATATCATTGGCTGGTTCACTTGTATTAATCCCATTAGTCATGGTACCAGTCATGGGTGGAACAGATGTAAGTGTATGATGTTATTTACCATTTATTACTCTCTAGTCGATAGTTCTTCAAATTTTTATCTATTCACATTACATTATTCTGATGACAGAAGGATACTGCTACCGTAATTTCTACAATGTTGTTTCTTTCCGGCATCACAACTATACTGCACTCTTACTTTGGCACCCGACTTCCTTTAGTGCAAGGGAGCTCGTTTGTGTATTTAGCACCTGCTTTAGTCATTATAAATGCTCAAGAATATCGGAATCTTACAGAACACGTAAGTTCCTACTACATTAACAAACAGAAAGTCTTAATTCATCAAACACTCAAGGCTTTTTTAAGCATAAATATCATTATATAAGTAACAACATTTAGATATCCTGTTACAAATCACATTAAAATTTGGTTTTTATCCTGTTCGTTTGAATATATTCTCAATTCCCTTATTAAATCCTGCATATTTCAGAAATTTAGACACATAATGAGGGAACTTCAAGGTGCTATAATTGTTGGTTCAATATTCCAATGTATCTTGGGATTTAGTGGCTTGATGTCTATCCTACTCAGGTAACAAAAAGTTTCATGCCATATCTTCCTTGTGTTCACCAAAACATTTTTTTCTCGTGTTGAATTGGTTACAATGTGTGTGTGTAGTACCATCCGAGATAAAGAGACACATGATATTCGTCAATGAAGCTGTTAGAAAAAAATAATACCTCGATATTACTCTAGAATATCTTGGTTTGTCCATTAGGGTCAGTTTTCAATCTTATCTTAAGATCATTTCCTAGGATTAATTATTTATATCCTTTTCCTATTATTATTATTTTTATTAAATTTGTTTCCCTTCCGAAGAAAAAAAAATGGTTTCCTTATTTACCTAATACTAGTCTTTTGTATCAAGCTACTATCGAGCCAGTATCATCTTATTGTCAATAATATTCAAATTCAAAGTTATTTTCTCTCTTCCTTTTATCTAATGTCCCACAACTTCAGCAAAAGCAATGAAAAATATTGAACTTTTATCAATAAGAGGTGTCACAATTTCAGTCTTGTATGTTAACTATTTACAATTTGTCGTAGGTTAATCAACCCTGTTGTGGTTGCGCCAACGGTTGCTGCTGTAGGTTTAGCGTTCTTCAGTTACGGTTTCCCACAAGCTGGTATTTGCTTGGAAATCACTGTTCCACAAATTGCATTGGTTCTATTATTCACTCTGGTGAGTCATGCAGTACCAATGCAGGGTTCTTCAGTTATCTGAATAGTTTTCTCATGGTTGTGATTTATAAAGTTACTGCTTGATTTATAAACATGTCACGGTATTTTGAAATTTTATTAAATAATTTATGTTTAGAAACTCACCATTTCTTCTTTTTGTCTTGTTTGTTGAAGCATCTTCGAGGAATATCTATCTCTGGACGCCACTTATTTCGAATTTATGCTGTAAGTATTCTTAAATTATGACGTTCTTTCTTCATTTTATATTCAGAATATATGATTATAGTCTAAAATAACAAACACTTATGAATTACATTTAAATATTTGCAGGTTCCGTTGAGCGCAACAATAACTTGGATATTTGCATCCCTTTTAACAGCTGGGGGTGTATATAATTACAAAGAATGCAATCCCAATGTACCGAGTTCAAACATTCTTACTGATGCGTGTAGAAAACATGCATATACCATGAAGCATTGCAGGGCTGATGTTTCCGATGCATTGTCTACTGCTGCATGGGTCAGAATTCCTTATCCTTTACAGTGGGGTATCCCTATTTTCCACTTCAGGACTTCCATAATCATGGTCATAGTGTCACTGGTTGCTTCTGTTGATTCGGTAAGTATCATATTTACATTTTTAGATGGATTTTCATGTTGAAAGCAAGTATCGCATTCAGTGGCGTATCAAGACTCTGAGTCACACTGGTTTATCCTTTTTGCAGGTTGGAACTTATCGTACTACGTCACTTCAAGTTAATTCAAGGCCTCCAACTCCAGGAGTTGTGAGCCGAGGAATTGCATTGGAGGGTTTCTGTAGTATATTGGCTGGTCTTTGGGGTTCAGGTACCGGTTCAACGACTTTGACAGAAAACATGCACACAATTAACATCACAAAGGTGGCAAGTAGGAGAGTAGTGGAACTTGGAGCAGTTTTCTTGATCCTCTTCTCATTTGTAGGTAAAGTAACAACACTTGGTGACCAACGTCCATAATTGCAGAATTATATTATTAACTAATATTTTGATGCCTAACACCTGAATTGAAGTTCAAATATTTCTTTATACAGGCTGAACATACATTTGAATTGTATTTTTTATTTTTATTTTTGTAGGAAAAGTGGGTGCTCTCCTTGCTTCCATTCCACAGGCCTTGGCTGCTGCTATACTGTGTTTCATGTGGGCTCTTACCGTGGCATTGGGCCTATCGACTTTACAGTATGGTCAATCAGCTAGCTTCAGGAACATGACAATTGTCGGCGTTGCATTGTTCCTTGGAATGTCCATTCCATCCTATTTTCAACAATACCAGCCTGAGTCAAGTCTTATACTGCCCAGTTATCTTGTTCCTTATGCGGCAGCGTCAAGTGGGCCATTCCATTCAGGCCTTAAACAAGTAAGTCATGTCGAATCATATTTTACTATCTTGACACCTCATTGTAGTATTACTTAAAAACTTGTTTAGACGGTGTTAGCGTATAATTAAATACAGTTGGATAATGTTAAGATGAGCTAAGCTGTCATTCTCTTTGTCCAAAACTTGTCAGCTTGATTTTGCTATCAACGCTCTTATGTCCATGAACATGGTGGTTACACTGTTGGTGGCATTTCTACTGGACAACACTGTCCCGGGAAGTAAACAAGAACGAGGAGTGTATACATGGTCGAGAGCTGAAGACATTGCCGCGGATGCCTCGCTGCAATCTGAATATTCCCTGCCAAAGAAACTTGCATGGTGTTGCTGTTGGTTGAAGTGA
Protein sequence

>MS.gene070688.t1

MENKAEPKVAPFVPKTGYNPRELRSWAKKTGFVSDYSGEAGTSGSEKFEPFHHRGRGSSSSPKIEIDPTRGVEIQPASQSQAGVLEENVRKENEPVLPLNGDVAPVTEEKDEENVVHGDGEVKVNVFPEGVEFGDGGWKGPSDLKCGLKENPGLVSLIYYGLQHYISLAGSLVLIPLVMVPVMGGTDKDTATVISTMLFLSGITTILHSYFGTRLPLVQGSSFVYLAPALVIINAQEYRNLTEHKFRHIMRELQGAIIVGSIFQCILGFSGLMSILLRLINPVVVAPTVAAVGLAFFSYGFPQAGICLEITVPQIALVLLFTLHLRGISISGRHLFRIYAVPLSATITWIFASLLTAGGVYNYKECNPNVPSSNILTDACRKHAYTMKHCRADVSDALSTAAWVRIPYPLQWGIPIFHFRTSIIMVIVSLVASVDSVGTYRTTSLQVNSRPPTPGVVSRGIALEGFCSILAGLWGSGTGSTTLTENMHTINITKVASRRVVELGAVFLILFSFVGKVGALLASIPQALAAAILCFMWALTVALGLSTLQYGQSASFRNMTIVGVALFLGMSIPSYFQQYQPESSLILPSYLVPYAAASSGPFHSGLKQLDFAINALMSMNMVVTLLVAFLLDNTVPGSKQERGVYTWSRAEDIAADASLQSEYSLPKKLAWCCCWLK