AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene073161

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene073161.t1 MTR_2g084020 98.540 274 4 0 1 274 45 318 0.0 555
MS.gene073161.t1 MTR_2g084010 91.241 274 24 0 1 274 45 318 0.0 513
MS.gene073161.t1 MTR_2g084000 83.942 274 44 0 1 274 46 319 3.82e-174 483
MS.gene073161.t1 MTR_2g084080 85.036 274 40 1 1 274 45 317 1.92e-172 479
MS.gene073161.t1 MTR_2g084110 83.942 274 43 1 1 274 45 317 6.11e-170 472
MS.gene073161.t1 MTR_2g084090 78.182 275 58 2 1 274 45 318 1.10e-155 436
MS.gene073161.t1 MTR_3g094650 70.330 273 78 3 4 274 51 322 1.83e-133 380
MS.gene073161.t1 MTR_3g094670 71.429 273 75 3 4 274 51 322 9.08e-132 376
MS.gene073161.t1 MTR_3g094630 68.116 276 85 2 1 274 48 322 2.90e-126 362
MS.gene073161.t1 MTR_5g083860 65.201 273 92 3 4 274 54 325 2.30e-125 360
MS.gene073161.t1 MTR_7g072510 62.409 274 102 1 1 274 40 312 2.87e-125 359
MS.gene073161.t1 MTR_7g072480 60.517 271 106 1 4 274 47 316 3.67e-119 343
MS.gene073161.t1 MTR_3g466200 59.489 274 107 3 4 274 48 320 1.80e-117 340
MS.gene073161.t1 MTR_3g072190 60.148 271 107 1 4 274 49 318 4.59e-112 326
MS.gene073161.t1 MTR_1g115900 60.073 273 106 2 4 274 50 321 9.10e-112 325
MS.gene073161.t1 MTR_4g029170 59.341 273 108 3 4 274 50 321 5.73e-111 323
MS.gene073161.t1 MTR_3g466180 61.993 271 102 1 4 274 54 323 3.22e-110 321
MS.gene073161.t1 MTR_5g074970 58.909 275 108 3 4 274 53 326 6.55e-110 320
MS.gene073161.t1 MTR_7g026990 57.565 271 113 2 4 274 54 322 1.02e-109 320
MS.gene073161.t1 MTR_5g074860 58.029 274 110 4 4 273 52 324 5.62e-108 316
MS.gene073161.t1 MTR_5g074760 58.273 278 111 4 1 274 45 321 6.47e-108 315
MS.gene073161.t1 MTR_4g029180 57.509 273 113 3 4 274 50 321 1.09e-107 315
MS.gene073161.t1 MTR_5g074740 58.273 278 111 4 1 274 45 321 1.19e-107 315
MS.gene073161.t1 MTR_4g083710 56.364 275 116 2 4 274 50 324 2.04e-106 311
MS.gene073161.t1 MTR_4g029200 54.745 274 123 1 1 274 66 338 3.12e-106 311
MS.gene073161.t1 MTR_5g074710 58.273 278 111 5 1 274 45 321 6.47e-106 310
MS.gene073161.t1 MTR_5g021060 53.381 281 124 1 1 274 50 330 3.25e-105 309
MS.gene073161.t1 MTR_4g029190 55.072 276 121 2 1 274 66 340 6.39e-105 308
MS.gene073161.t1 MTR_3g467600 54.348 276 122 3 3 274 49 324 7.02e-102 300
MS.gene073161.t1 MTR_8g076820 51.246 281 130 1 1 274 50 330 1.06e-100 297
MS.gene073161.t1 MTR_4g074995 54.182 275 109 3 4 274 47 308 3.15e-99 293
MS.gene073161.t1 MTR_3g072190 57.769 251 105 1 24 274 2 251 4.79e-98 288
MS.gene073161.t1 MTR_5g017860 53.191 282 122 4 1 274 47 326 9.70e-97 287
MS.gene073161.t1 MTR_5g017850 53.763 279 119 4 4 274 50 326 7.52e-96 285
MS.gene073161.t1 MTR_1g022970 52.482 282 126 2 1 274 66 347 1.23e-95 285
MS.gene073161.t1 MTR_1g054205 50.530 283 131 3 1 274 44 326 1.01e-94 282
MS.gene073161.t1 MTR_4g074990 52.000 275 112 3 4 274 47 305 2.84e-92 275
MS.gene073161.t1 MTR_4g122640 48.746 279 138 1 1 274 58 336 1.94e-91 274
MS.gene073161.t1 MTR_7g093370 48.057 283 138 3 1 274 89 371 1.17e-90 273
MS.gene073161.t1 MTR_4g125940 50.000 284 130 3 1 274 48 329 5.01e-90 270
MS.gene073161.t1 MTR_2g040000 50.000 282 128 3 4 274 52 331 1.80e-89 269
MS.gene073161.t1 MTR_4g125940 50.182 275 125 3 10 274 2 274 2.31e-87 261
MS.gene073161.t1 MTR_2g029860 47.518 282 140 2 1 274 49 330 4.70e-87 263
MS.gene073161.t1 MTR_5g014100 48.944 284 131 3 4 274 49 331 5.44e-87 263
MS.gene073161.t1 MTR_2g029815 48.727 275 133 2 8 274 56 330 4.18e-86 261
MS.gene073161.t1 MTR_5g049280 45.965 285 143 5 1 274 53 337 6.43e-85 257
MS.gene073161.t1 MTR_2g029830 46.809 282 142 2 1 274 48 329 6.70e-85 258
MS.gene073161.t1 MTR_2g029750 46.809 282 142 2 1 274 49 330 1.18e-84 257
MS.gene073161.t1 MTR_2g029740 46.809 282 142 2 1 274 49 330 5.68e-84 256
MS.gene073161.t1 MTR_2g028980 48.364 275 134 2 8 274 56 330 1.31e-83 254
MS.gene073161.t1 MTR_2g029850 48.000 275 135 2 8 274 56 330 2.02e-83 254
MS.gene073161.t1 MTR_2g029560 46.182 275 140 2 8 274 51 325 2.03e-83 254
MS.gene073161.t1 MTR_5g074860 50.000 274 93 6 4 273 52 285 2.68e-83 251
MS.gene073161.t1 MTR_2g029800 48.000 275 135 2 8 274 56 330 7.00e-83 253
MS.gene073161.t1 MTR_2g029820 46.545 275 139 2 8 274 56 330 6.24e-82 250
MS.gene073161.t1 MTR_4g074980 47.794 272 116 3 4 274 48 294 7.88e-81 245
MS.gene073161.t1 MTR_4g030890 46.619 281 139 4 1 274 120 396 1.24e-80 249
MS.gene073161.t1 MTR_2g029910 47.101 276 137 3 8 274 57 332 1.35e-80 247
MS.gene073161.t1 MTR_3g092990 44.286 280 147 3 3 274 48 326 2.57e-79 243
MS.gene073161.t1 MTR_2g029730 44.681 282 148 2 1 274 45 326 2.00e-78 241
MS.gene073161.t1 MTR_4g031140 43.416 281 148 4 1 274 48 324 8.51e-76 234
MS.gene073161.t1 MTR_2g029830 46.875 256 128 2 27 274 6 261 9.04e-76 232
MS.gene073161.t1 MTR_4g074980 54.854 206 89 2 4 205 48 253 1.43e-75 231
MS.gene073161.t1 MTR_0155s0040 42.182 275 152 6 1 274 47 315 3.83e-75 232
MS.gene073161.t1 MTR_2g088770 43.728 279 145 6 5 274 50 325 3.58e-70 219
MS.gene073161.t1 MTR_3g092990 44.531 256 133 3 27 274 61 315 1.35e-69 218
MS.gene073161.t1 MTR_4g046713 42.446 278 150 4 5 274 51 326 1.45e-69 218
MS.gene073161.t1 MTR_2g008710 42.705 281 144 6 5 274 51 325 7.28e-68 213
MS.gene073161.t1 MTR_1g101830 41.304 276 148 7 7 274 53 322 1.77e-67 212
MS.gene073161.t1 MTR_7g086820 39.929 283 151 5 1 274 40 312 2.10e-67 212
MS.gene073161.t1 MTR_1g009750 43.494 269 140 5 16 274 62 328 1.15e-66 210
MS.gene073161.t1 MTR_7g107520 42.294 279 149 4 3 274 47 320 2.99e-66 209
MS.gene073161.t1 MTR_4g114210 42.199 282 145 6 5 274 45 320 6.87e-66 208
MS.gene073161.t1 MTR_6g027440 43.123 269 143 6 11 274 51 314 8.29e-66 208
MS.gene073161.t1 MTR_8g075100 40.357 280 149 6 4 274 49 319 1.15e-65 207
MS.gene073161.t1 MTR_1g025980 41.637 281 145 8 3 273 46 317 1.83e-65 207
MS.gene073161.t1 MTR_5g074700 49.339 227 96 5 52 274 3 214 1.87e-65 204
MS.gene073161.t1 MTR_1g077000 41.026 273 154 6 3 274 61 327 1.91e-65 207
MS.gene073161.t1 MTR_5g022870 40.636 283 150 6 1 274 43 316 2.94e-65 206
MS.gene073161.t1 MTR_1g086320 40.909 286 155 5 1 274 50 333 7.03e-65 206
MS.gene073161.t1 MTR_7g086870 39.855 276 158 6 1 274 42 311 4.12e-64 203
MS.gene073161.t1 MTR_1g038680 40.767 287 154 6 1 274 49 332 8.14e-63 201
MS.gene073161.t1 MTR_7g029030 40.824 267 152 4 12 274 56 320 4.52e-62 198
MS.gene073161.t1 MTR_5g016010 41.045 268 147 4 16 273 62 328 9.69e-62 198
MS.gene073161.t1 MTR_3g072210 54.595 185 83 1 91 274 54 238 6.47e-61 193
MS.gene073161.t1 MTR_4g087965 41.758 273 146 7 12 272 73 344 1.02e-60 196
MS.gene073161.t1 MTR_4g133800 38.849 278 153 6 5 274 65 333 4.34e-60 194
MS.gene073161.t1 MTR_2g437770 38.652 282 155 7 1 274 70 341 4.79e-60 194
MS.gene073161.t1 MTR_1g086490 39.384 292 158 5 1 274 50 340 1.32e-59 192
MS.gene073161.t1 MTR_6g043280 40.288 278 156 7 1 274 61 332 2.58e-58 189
MS.gene073161.t1 MTR_4g095450 40.304 263 151 4 16 273 62 323 6.32e-57 185
MS.gene073161.t1 MTR_4g127670 41.132 265 142 5 16 270 59 319 1.95e-56 184
MS.gene073161.t1 MTR_1g090760 38.148 270 156 5 15 274 62 330 1.68e-55 182
MS.gene073161.t1 MTR_2g008160 40.727 275 143 9 13 274 56 323 8.31e-55 180
MS.gene073161.t1 MTR_7g072490 40.664 241 88 3 27 267 2 187 2.98e-54 175
MS.gene073161.t1 MTR_2g077990 36.842 304 150 9 11 274 106 407 3.25e-54 181
MS.gene073161.t1 MTR_2g008730 43.210 243 124 5 43 274 62 301 5.39e-54 177
MS.gene073161.t1 MTR_1g066710 35.401 274 170 4 6 274 52 323 6.60e-54 177
MS.gene073161.t1 MTR_2g078610 36.513 304 151 9 11 274 106 407 1.50e-53 179
MS.gene073161.t1 MTR_2g067440 34.839 310 162 7 1 273 80 386 3.82e-53 177
MS.gene073161.t1 MTR_2g099175 35.943 281 162 5 6 274 61 335 1.34e-52 174
MS.gene073161.t1 MTR_4g132490 34.307 274 171 4 8 274 56 327 1.49e-52 174
MS.gene073161.t1 MTR_6g043240 38.043 276 163 6 1 274 62 331 2.05e-52 174
MS.gene073161.t1 MTR_1g066640 35.125 279 174 4 1 274 47 323 5.08e-52 172
MS.gene073161.t1 MTR_1g009750 37.828 267 141 6 16 274 62 311 9.55e-52 171
MS.gene073161.t1 MTR_0286s0010 36.364 275 158 6 12 274 65 334 1.97e-51 171
MS.gene073161.t1 MTR_6g008075 36.364 275 158 6 12 274 65 334 1.97e-51 171
MS.gene073161.t1 MTR_6g043460 39.147 258 152 5 15 270 70 324 5.91e-51 171
MS.gene073161.t1 MTR_1g066380 34.307 274 173 4 6 274 52 323 2.53e-50 168
MS.gene073161.t1 MTR_3g105790 37.410 278 160 3 6 274 50 322 5.06e-50 167
MS.gene073161.t1 MTR_1g066680 35.273 275 167 5 7 274 52 322 2.41e-49 166
MS.gene073161.t1 MTR_2g078280 35.986 289 144 8 11 260 106 392 2.94e-48 165
MS.gene073161.t1 MTR_8g062780 36.194 268 161 5 16 274 58 324 6.75e-48 162
MS.gene073161.t1 MTR_5g033470 35.587 281 154 7 13 274 105 377 5.42e-47 161
MS.gene073161.t1 MTR_2g067450 36.742 264 154 6 20 273 49 309 2.70e-46 157
MS.gene073161.t1 MTR_4g132110 34.962 266 166 4 14 274 65 328 1.46e-45 156
MS.gene073161.t1 MTR_1g066380 33.725 255 162 4 25 274 3 255 8.49e-45 152
MS.gene073161.t1 MTR_0147s0010 32.180 289 150 6 14 273 110 381 2.06e-43 152
MS.gene073161.t1 MTR_4g132110 34.317 271 166 5 14 274 65 333 2.64e-43 150
MS.gene073161.t1 MTR_2g008160 36.803 269 127 9 13 274 56 288 1.75e-41 144
MS.gene073161.t1 MTR_2g029880 38.776 196 102 4 87 274 3 188 1.15e-39 137
MS.gene073161.t1 MTR_3g105790 36.667 240 142 2 44 274 8 246 6.37e-39 136
MS.gene073161.t1 MTR_3g072260 70.455 88 26 0 1 88 46 133 1.39e-37 130
MS.gene073161.t1 MTR_2g008160 48.921 139 67 3 12 150 55 189 4.83e-36 128
MS.gene073161.t1 MTR_2g077980 32.014 278 140 11 43 274 11 285 1.07e-25 103
MS.gene073161.t1 MTR_3g462850 41.096 146 73 7 141 274 5 149 1.34e-24 96.7
MS.gene073161.t1 MTR_7g086790 41.667 120 66 2 28 147 17 132 3.27e-24 96.7
MS.gene073161.t1 MTR_5g074770 50.000 90 43 2 185 273 20 108 1.16e-22 90.1
MS.gene073161.t1 MTR_2g078560 28.571 217 116 5 92 270 101 316 1.45e-21 92.4
MS.gene073161.t1 MTR_4g114220 49.412 85 33 2 6 90 28 102 6.75e-19 81.3
MS.gene073161.t1 MTR_4g031040 33.537 164 72 3 42 205 3 129 1.02e-18 80.5
MS.gene073161.t1 MTR_5g058120 33.974 156 94 4 117 270 7 155 1.90e-17 80.1
MS.gene073161.t1 MTR_6g048160 52.778 72 30 2 20 91 22 89 2.32e-17 75.5
MS.gene073161.t1 MTR_3g107060 25.882 255 125 7 13 253 106 310 6.27e-15 73.9
MS.gene073161.t1 MTR_1g089005 49.398 83 35 2 11 87 45 126 3.80e-14 68.9
MS.gene073161.t1 MTR_1g098320 44.304 79 43 1 196 274 47 124 8.52e-14 67.4
MS.gene073161.t1 MTR_7g107500 43.529 85 46 1 190 274 15 97 3.28e-13 64.7
MS.gene073161.t1 MTR_7g086785 29.545 132 92 1 27 158 4 134 1.35e-12 63.9
MS.gene073161.t1 MTR_2g029930 45.070 71 25 2 8 64 32 102 9.55e-12 60.8
MS.gene073161.t1 MTR_7g086810 33.333 99 40 1 1 99 26 98 1.31e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene073161.t1 AT5G05340 64.130 276 96 2 1 274 50 324 1.56e-126 363
MS.gene073161.t1 AT5G58400 58.484 277 111 3 1 274 50 325 2.71e-108 317
MS.gene073161.t1 AT5G58390 60.370 270 103 4 8 274 48 316 3.25e-107 313
MS.gene073161.t1 AT1G14550 53.846 273 124 2 4 274 49 321 6.38e-102 300
MS.gene073161.t1 AT4G36430 50.178 281 133 1 1 274 50 330 2.57e-101 299
MS.gene073161.t1 AT5G66390 51.601 281 129 1 1 274 53 333 1.45e-100 297
MS.gene073161.t1 AT1G44970 54.255 282 121 2 1 274 65 346 6.48e-99 293
MS.gene073161.t1 AT3G50990 52.158 278 126 1 4 274 64 341 1.26e-98 293
MS.gene073161.t1 AT2G18150 49.466 281 135 1 1 274 56 336 2.83e-98 291
MS.gene073161.t1 AT2G18140 49.466 281 135 1 1 274 55 335 3.80e-98 291
MS.gene073161.t1 AT1G14540 50.735 272 133 1 4 274 44 315 3.23e-95 283
MS.gene073161.t1 AT5G06720 48.582 282 137 2 1 274 52 333 6.40e-93 278
MS.gene073161.t1 AT1G49570 51.439 278 124 4 3 270 70 346 5.91e-92 276
MS.gene073161.t1 AT5G06730 46.809 282 142 2 1 274 53 334 1.44e-90 273
MS.gene073161.t1 AT4G08780 49.474 285 132 5 1 274 44 327 2.98e-90 271
MS.gene073161.t1 AT2G38390 47.703 283 139 3 1 274 51 333 4.44e-89 268
MS.gene073161.t1 AT4G08770 47.887 284 138 3 1 274 44 327 4.88e-88 266
MS.gene073161.t1 AT4G16270 49.091 275 131 3 7 274 76 348 1.43e-87 265
MS.gene073161.t1 AT3G32980 47.535 284 139 3 1 274 51 334 8.05e-87 263
MS.gene073161.t1 AT2G38380 46.643 283 142 3 1 274 51 333 1.18e-84 257
MS.gene073161.t1 AT2G35380 48.239 284 133 4 4 274 53 335 2.41e-83 253
MS.gene073161.t1 AT3G49120 46.831 284 141 3 1 274 52 335 1.14e-82 252
MS.gene073161.t1 AT5G19890 48.754 281 128 5 4 274 53 327 1.88e-82 251
MS.gene073161.t1 AT3G49110 46.127 284 143 3 1 274 53 336 2.26e-82 251
MS.gene073161.t1 AT1G68850 42.857 287 150 6 1 274 50 335 1.64e-81 249
MS.gene073161.t1 AT2G22420 43.416 281 148 4 1 274 43 319 4.35e-77 237
MS.gene073161.t1 AT5G19880 44.755 286 145 5 1 274 45 329 2.42e-74 230
MS.gene073161.t1 AT3G03670 43.431 274 146 3 8 274 50 321 1.36e-70 220
MS.gene073161.t1 AT5G15180 40.860 279 155 4 3 274 54 329 2.21e-70 220
MS.gene073161.t1 AT1G05260 40.071 282 159 4 1 274 46 325 1.56e-69 218
MS.gene073161.t1 AT5G64120 44.404 277 142 5 4 274 58 328 3.69e-69 217
MS.gene073161.t1 AT4G11290 40.071 282 161 2 1 274 45 326 6.81e-69 216
MS.gene073161.t1 AT5G17820 43.173 271 136 6 11 274 54 313 7.50e-69 216
MS.gene073161.t1 AT2G35380 47.755 245 114 4 43 274 4 247 3.42e-68 212
MS.gene073161.t1 AT5G17820 43.173 271 136 6 11 274 107 366 6.94e-68 215
MS.gene073161.t1 AT5G42180 41.071 280 152 5 1 273 43 316 1.25e-67 213
MS.gene073161.t1 AT1G05240 40.210 286 151 6 2 274 47 325 1.87e-67 213
MS.gene073161.t1 AT1G05250 40.210 286 151 6 2 274 47 325 1.87e-67 213
MS.gene073161.t1 AT3G01190 42.500 280 145 7 4 274 49 321 2.23e-66 209
MS.gene073161.t1 AT2G41480 41.489 282 147 7 5 274 53 328 2.41e-64 204
MS.gene073161.t1 AT3G21770 38.686 274 158 4 5 270 53 324 2.80e-64 204
MS.gene073161.t1 AT5G14130 42.066 271 138 6 16 274 67 330 1.37e-63 202
MS.gene073161.t1 AT5G14130 42.066 271 138 6 16 274 108 371 3.43e-63 203
MS.gene073161.t1 AT1G71695 41.606 274 154 5 1 270 64 335 3.73e-63 202
MS.gene073161.t1 AT5G40150 40.824 267 153 4 12 274 63 328 5.82e-63 201
MS.gene073161.t1 AT3G28200 40.977 266 153 4 12 274 52 316 8.93e-63 200
MS.gene073161.t1 AT5G64110 43.866 269 136 5 15 274 68 330 2.82e-62 199
MS.gene073161.t1 AT4G33420 40.441 272 155 6 4 274 60 325 9.64e-62 198
MS.gene073161.t1 AT5G51890 40.580 276 149 7 8 274 53 322 1.04e-61 197
MS.gene073161.t1 AT4G30170 41.852 270 140 7 16 274 62 325 2.41e-61 197
MS.gene073161.t1 AT4G33420 40.441 272 155 6 4 274 107 372 3.91e-61 197
MS.gene073161.t1 AT4G26010 40.977 266 147 7 11 274 52 309 9.49e-61 195
MS.gene073161.t1 AT4G26010 40.977 266 147 7 11 274 80 337 1.33e-60 195
MS.gene073161.t1 AT4G37530 40.146 274 143 6 16 274 62 329 2.07e-60 194
MS.gene073161.t1 AT2G18980 41.852 270 140 7 16 274 60 323 1.93e-59 192
MS.gene073161.t1 AT5G64100 42.007 269 139 6 15 274 71 331 2.43e-59 192
MS.gene073161.t1 AT5G39580 41.455 275 148 6 7 274 51 319 6.95e-59 190
MS.gene073161.t1 AT1G30870 38.182 275 151 7 6 270 76 341 1.43e-58 190
MS.gene073161.t1 AT4G33870 34.539 304 151 7 11 270 98 397 5.35e-58 190
MS.gene073161.t1 AT4G37520 38.491 265 152 4 16 270 62 325 1.21e-57 187
MS.gene073161.t1 AT2G34060 40.520 269 147 6 16 272 77 344 3.95e-57 186
MS.gene073161.t1 AT5G67400 38.290 269 155 4 16 274 62 329 2.18e-56 184
MS.gene073161.t1 AT2G39040 39.236 288 158 7 1 274 66 350 2.24e-56 185
MS.gene073161.t1 AT4G25980 39.636 275 147 8 13 274 58 326 3.60e-56 183
MS.gene073161.t1 AT1G77100 40.214 281 156 9 1 274 44 319 1.58e-55 182
MS.gene073161.t1 AT4G17690 35.971 278 173 4 1 274 46 322 1.65e-55 182
MS.gene073161.t1 AT3G49960 39.033 269 153 4 16 274 62 329 1.72e-55 182
MS.gene073161.t1 AT4G37520 37.918 269 153 5 16 274 62 326 2.52e-55 181
MS.gene073161.t1 AT1G34510 38.868 265 154 6 11 274 52 309 1.15e-54 179
MS.gene073161.t1 AT4G31760 35.714 280 166 3 4 274 52 326 1.47e-53 177
MS.gene073161.t1 AT5G24070 36.014 286 164 5 1 274 57 335 2.38e-53 177
MS.gene073161.t1 AT2G24800 35.664 286 159 5 4 274 54 329 3.61e-52 173
MS.gene073161.t1 AT1G24110 37.313 268 157 5 16 274 57 322 6.70e-52 172
MS.gene073161.t1 AT2G43480 35.106 282 162 6 6 274 62 335 1.19e-51 172
MS.gene073161.t1 AT5G22410 37.367 281 156 9 3 271 50 322 3.41e-51 171
MS.gene073161.t1 AT4G37530 42.396 217 115 3 16 222 62 278 3.53e-51 169
MS.gene073161.t1 AT5G47000 35.821 268 166 4 12 274 64 330 6.49e-51 170
MS.gene073161.t1 AT3G17070 37.455 275 154 9 13 274 70 339 5.01e-49 165
MS.gene073161.t1 AT2G37130 34.944 269 167 5 12 274 30 296 2.14e-48 162
MS.gene073161.t1 AT2G37130 34.944 269 167 5 12 274 61 327 6.11e-48 162
MS.gene073161.t1 AT4G21960 34.211 266 168 4 14 274 64 327 3.16e-47 160
MS.gene073161.t1 AT3G17070 36.226 265 150 10 23 274 18 276 3.74e-42 145
MS.gene073161.t1 AT4G25980 47.826 138 68 3 11 148 101 234 8.29e-36 129
MS.gene073161.t1 AT5G39580 40.571 175 95 4 7 181 51 216 6.50e-34 123
MS.gene073161.t1 AT2G24800 39.752 161 91 2 4 162 54 210 8.39e-33 120
MS.gene073161.t1 AT3G42570 37.634 93 57 1 57 148 57 149 5.06e-15 71.2
MS.gene073161.t1 AT4G35970 26.482 253 130 9 15 256 33 240 2.04e-13 68.9
MS.gene073161.t1 AT4G35970 27.727 220 104 8 15 223 33 208 2.18e-11 62.4

Find 0 sgRNAs with CRISPR-Local

Find 118 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATAAAATATTGTCTTA+TGG + 14523:66837-66856 MS.gene073161:intron 10.0%
!! CATAATATATAATATATGTA+AGG - 14523:66019-66038 MS.gene073161:intergenic 10.0%
!! TAAATAAAATAAGAAAAGAT+CGG - 14523:66455-66474 MS.gene073161:intergenic 10.0%
!! TCAATATATTAACTAATTAT+GGG - 14523:66571-66590 MS.gene073161:intergenic 10.0%
!!! TTTCTTATTTTATTTAATCA+AGG + 14523:66459-66478 MS.gene073161:intron 10.0%
!! ACTAGATACATAAATATAAT+TGG + 14523:66523-66542 MS.gene073161:intron 15.0%
!! ATATAATTAGAGAAATGTAT+TGG - 14523:66696-66715 MS.gene073161:intergenic 15.0%
!! CTCAATATATTAACTAATTA+TGG - 14523:66572-66591 MS.gene073161:intergenic 15.0%
!!! AATTAATTTATTTTGTAGCT+TGG + 14523:66915-66934 MS.gene073161:intron 15.0%
!!! ACTTAATTTGTAAATTTAGT+TGG - 14523:65824-65843 MS.gene073161:intergenic 15.0%
!!! TTTTGTACTTGTTTTTTTTT+TGG - 14523:66807-66826 MS.gene073161:intergenic 15.0%
!! AAGAAAAATGAAGAAAGAAA+TGG - 14523:65777-65796 MS.gene073161:intergenic 20.0%
!! ACACATGATCAAATTATATA+TGG + 14523:66283-66302 MS.gene073161:intron 20.0%
!! AGAAAAATGAAGAAAGAAAT+GGG - 14523:65776-65795 MS.gene073161:intergenic 20.0%
!! TGAAAAGGAAATTATCAAAA+GGG + 14523:66386-66405 MS.gene073161:intron 20.0%
!!! AAAATCAATTTCTAAGATGA+TGG + 14523:66608-66627 MS.gene073161:intron 20.0%
!!! AATCAATAACATCTCTAAAA+CGG - 14523:65921-65940 MS.gene073161:intergenic 20.0%
!!! ATTGATTTCTTTTCTTGATA+TGG + 14523:65934-65953 MS.gene073161:intron 20.0%
!!! GTTTCCTATAATTTTGTTTT+TGG + 14523:66124-66143 MS.gene073161:intron 20.0%
!!! TACTTGTTTTTTTTTTGGAA+GGG - 14523:66802-66821 MS.gene073161:intergenic 20.0%
!!! TATAATTTTGTTTTTGGCAT+GGG + 14523:66130-66149 MS.gene073161:intron 20.0%
! AATCACTCATTATACTGAAA+AGG + 14523:66371-66390 MS.gene073161:intron 25.0%
! CATGCCAAAAACAAAATTAT+AGG - 14523:66131-66150 MS.gene073161:intergenic 25.0%
! CTGAAAAGGAAATTATCAAA+AGG + 14523:66385-66404 MS.gene073161:intron 25.0%
! GATCAAAAATATGTGAAAAC+AGG - 14523:66196-66215 MS.gene073161:intergenic 25.0%
! TAATTGTTGTCAAAAGTAAC+TGG - 14523:67254-67273 MS.gene073161:intergenic 25.0%
! TATAATATATGTAAGGTCTG+TGG - 14523:66012-66031 MS.gene073161:intergenic 25.0%
! TTACATTTACAAAGCAATCA+TGG - 14523:65460-65479 MS.gene073161:intergenic 25.0%
!! TGTCTTTTTCTTTCTTACTT+TGG + 14523:66037-66056 MS.gene073161:intron 25.0%
!!! AGGACAATTTGATTTTCTTA+AGG - 14523:67186-67205 MS.gene073161:intergenic 25.0%
!!! CTATAATTTTGTTTTTGGCA+TGG + 14523:66129-66148 MS.gene073161:intron 25.0%
!!! GAGTTTTTTTTTTCTTTCTG+TGG + 14523:65974-65993 MS.gene073161:intron 25.0%
!!! GTACTTGTTTTTTTTTTGGA+AGG - 14523:66803-66822 MS.gene073161:intergenic 25.0%
!!! GTTTCCATGTTTATTTTGTA+GGG + 14523:65552-65571 MS.gene073161:intron 25.0%
!!! TAATTTATTTTGTAGCTTGG+AGG + 14523:66918-66937 MS.gene073161:intron 25.0%
!!! TGTTTCCATGTTTATTTTGT+AGG + 14523:65551-65570 MS.gene073161:intron 25.0%
AAATCAAATTGTCCTACTTC+TGG + 14523:67191-67210 MS.gene073161:CDS 30.0%
AAGCTATCAATAATGAAGCT+CGG + 14523:65405-65424 MS.gene073161:CDS 30.0%
AATAAGAAAAGATCGGACTA+AGG - 14523:66448-66467 MS.gene073161:intergenic 30.0%
AATGACCTTGTTGCTAATAA+AGG + 14523:67278-67297 MS.gene073161:CDS 30.0%
ACTACCATGTTTAGAAACAA+AGG + 14523:67044-67063 MS.gene073161:CDS 30.0%
ATGCATTATTGTGCAAAATC+TGG - 14523:66255-66274 MS.gene073161:intergenic 30.0%
ATTATTGTGCAAAATCTGGA+GGG - 14523:66251-66270 MS.gene073161:intergenic 30.0%
GGGTTCTATTATAAGATGAA+AGG + 14523:66406-66425 MS.gene073161:intron 30.0%
GTAAACTATCAACAACACAA+GGG - 14523:65802-65821 MS.gene073161:intergenic 30.0%
GTACAATAGTGTTAAACATG+AGG - 14523:66505-66524 MS.gene073161:intergenic 30.0%
TACGATAAGATTTCAATCTC+CGG + 14523:66070-66089 MS.gene073161:intron 30.0%
! AGCTTCATTATTGATAGCTT+TGG - 14523:65405-65424 MS.gene073161:intergenic 30.0%
! ATGCGATGGATCAATTTTAT+TGG + 14523:65575-65594 MS.gene073161:CDS 30.0%
! TAATTGGTAACACGATTCAT+AGG + 14523:66539-66558 MS.gene073161:intron 30.0%
! TGATCTTTTGATAAAGAGAC+TGG - 14523:66349-66368 MS.gene073161:intergenic 30.0%
!! GTCAACTCTTGTTATTGTAT+GGG + 14523:66224-66243 MS.gene073161:intron 30.0%
!! TAGACCTTTGTTTCTAAACA+TGG - 14523:67051-67070 MS.gene073161:intergenic 30.0%
!! TGTCAACTCTTGTTATTGTA+TGG + 14523:66223-66242 MS.gene073161:intron 30.0%
ACCTAACAAAAACTCAGCTA+GGG + 14523:65635-65654 MS.gene073161:CDS 35.0%
AGTAGAATTAGTCCTCTAAC+TGG + 14523:67422-67441 MS.gene073161:CDS 35.0%
ATCAATAATGAAGCTCGGAT+TGG + 14523:65410-65429 MS.gene073161:CDS 35.0%
CATTATTGTGCAAAATCTGG+AGG - 14523:66252-66271 MS.gene073161:intergenic 35.0%
GAAGTCCTTTATTAGCAACA+AGG - 14523:67286-67305 MS.gene073161:intergenic 35.0%
GCATCCCTACAAAATAAACA+TGG - 14523:65559-65578 MS.gene073161:intergenic 35.0%
GGTAAACTATCAACAACACA+AGG - 14523:65803-65822 MS.gene073161:intergenic 35.0%
GTAGAATTAGTCCTCTAACT+GGG + 14523:67423-67442 MS.gene073161:CDS 35.0%
GTTCTCAAGTTTCTTTGGTT+AGG + 14523:67339-67358 MS.gene073161:CDS 35.0%
TGCAAAGTTTGTGTCAATGT+TGG - 14523:67162-67181 MS.gene073161:intergenic 35.0%
! TCTGATCAAGCTCTTTTCAA+TGG + 14523:67311-67330 MS.gene073161:CDS 35.0%
! TTCTGGTGGTGACATAAATT+TGG + 14523:67208-67227 MS.gene073161:CDS 35.0%
!! AAGAGACTGGTTGTATTTTG+TGG - 14523:66336-66355 MS.gene073161:intergenic 35.0%
!! TGTTGGTTCTCAAGTTTCTT+TGG + 14523:67334-67353 MS.gene073161:CDS 35.0%
!!! AGCTTCAACACTGGTTTTAA+TGG - 14523:65679-65698 MS.gene073161:intergenic 35.0%
!!! TTTATTTTGTAGGGATGCGA+TGG + 14523:65561-65580 MS.gene073161:intron 35.0%
!!! TTTTTTTCTTTCTGTGGTCG+AGG + 14523:65980-65999 MS.gene073161:intron 35.0%
AATATCAGCACAAGAGACAG+TGG - 14523:65712-65731 MS.gene073161:intergenic 40.0%
AATGACCTTACTGTCCTTTC+TGG + 14523:67077-67096 MS.gene073161:CDS 40.0%
CACCTAACAAAAACTCAGCT+AGG + 14523:65634-65653 MS.gene073161:CDS 40.0%
CCTAACAAAAACTCAGCTAG+GGG + 14523:65636-65655 MS.gene073161:CDS 40.0%
GGGAGATTAGAAAGAATTGC+AGG + 14523:67453-67472 MS.gene073161:CDS 40.0%
TCAAATTGTCCTACTTCTGG+TGG + 14523:67194-67213 MS.gene073161:CDS 40.0%
TTGACATTCTGCTTGACCTA+TGG - 14523:67111-67130 MS.gene073161:intergenic 40.0%
TTTATGTCACCACCAGAAGT+AGG - 14523:67206-67225 MS.gene073161:intergenic 40.0%
! ACAGGTTAAAAGAGAGTGTG+TGG - 14523:66178-66197 MS.gene073161:intergenic 40.0%
! AGCTGAGTTTTTGTTAGGTG+CGG - 14523:65634-65653 MS.gene073161:intergenic 40.0%
! AGGTTAAAAGAGAGTGTGTG+GGG - 14523:66176-66195 MS.gene073161:intergenic 40.0%
! ATTTTTCTCACCGGTAAAGG+TGG - 14523:65610-65629 MS.gene073161:intergenic 40.0%
! CAAGCTCTTTTCAATGGTGT+TGG + 14523:67317-67336 MS.gene073161:CDS 40.0%
! CAGGTTAAAAGAGAGTGTGT+GGG - 14523:66177-66196 MS.gene073161:intergenic 40.0%
! TCTAAACATGGTAGTGAGTG+TGG - 14523:67039-67058 MS.gene073161:intergenic 40.0%
AAGAGACTTTGCAGCTGCTA+TGG + 14523:67391-67410 MS.gene073161:CDS 45.0%
ACTGGAGAGACAGAATCAAG+AGG - 14523:67236-67255 MS.gene073161:intergenic 45.0%
AGTCCTCTAACTGGGACTAA+TGG + 14523:67431-67450 MS.gene073161:CDS 45.0%
AGTGTGGATAGGTCAGAAGA+TGG - 14523:67023-67042 MS.gene073161:intergenic 45.0%
ATAGGTCAGAAGATGGTCCA+GGG - 14523:67016-67035 MS.gene073161:intergenic 45.0%
CTAGCACTTGCAACTAGAGA+TGG + 14523:65732-65751 MS.gene073161:CDS 45.0%
CTTGCATCTCTTCTTCCAAG+TGG - 14523:66960-66979 MS.gene073161:intergenic 45.0%
GTCCTCTAACTGGGACTAAT+GGG + 14523:67432-67451 MS.gene073161:CDS 45.0%
GTTACCTGCTTGAGAATGAC+CGG - 14523:66092-66111 MS.gene073161:intergenic 45.0%
TCCTCTAACTGGGACTAATG+GGG + 14523:67433-67452 MS.gene073161:CDS 45.0%
! ACATGGTAGTGAGTGTGGAT+AGG - 14523:67034-67053 MS.gene073161:intergenic 45.0%
! CCCCTAGCTGAGTTTTTGTT+AGG - 14523:65639-65658 MS.gene073161:intergenic 45.0%
! GGCATTTTTCTCACCGGTAA+AGG - 14523:65613-65632 MS.gene073161:intergenic 45.0%
! GGTTAAAAGAGAGTGTGTGG+GGG - 14523:66175-66194 MS.gene073161:intergenic 45.0%
! GTTAAAAGAGAGTGTGTGGG+GGG - 14523:66174-66193 MS.gene073161:intergenic 45.0%
ACTGCAAGCAGCTTCAACAC+TGG - 14523:65688-65707 MS.gene073161:intergenic 50.0%
ATCTCCGGTCATTCTCAAGC+AGG + 14523:66085-66104 MS.gene073161:intron 50.0%
CAGAAGATGGTCCAGGGATT+TGG - 14523:67010-67029 MS.gene073161:intergenic 50.0%
CTATGGTGTGTGCACCAGAA+AGG - 14523:67094-67113 MS.gene073161:intergenic 50.0%
GATAGGTCAGAAGATGGTCC+AGG - 14523:67017-67036 MS.gene073161:intergenic 50.0%
GATGACACTGCCACCTTTAC+CGG + 14523:65597-65616 MS.gene073161:CDS 50.0%
GTGCACCAGAAAGGACAGTA+AGG - 14523:67085-67104 MS.gene073161:intergenic 50.0%
TCCCCATTAGTCCCAGTTAG+AGG - 14523:67437-67456 MS.gene073161:intergenic 50.0%
TCTTCCAAGTGGTACTACCC+AGG - 14523:66949-66968 MS.gene073161:intergenic 50.0%
! AGGTGCGGCATTTTTCTCAC+CGG - 14523:65619-65638 MS.gene073161:intergenic 50.0%
! CTTTCTGGTGCACACACCAT+AGG + 14523:67092-67111 MS.gene073161:CDS 50.0%
CCAACCTGGGTAGTACCACT+TGG + 14523:66942-66961 MS.gene073161:CDS 55.0%
CCAAGTGGTACTACCCAGGT+TGG - 14523:66945-66964 MS.gene073161:intergenic 55.0%
GCAGCAAACAGCCAAATCCC+TGG + 14523:66996-67015 MS.gene073161:CDS 55.0%
GTAGCTTGGAGGACCAACCT+GGG + 14523:66929-66948 MS.gene073161:intron 55.0%
TGTAGCTTGGAGGACCAACC+TGG + 14523:66928-66947 MS.gene073161:intron 55.0%
! AGAGAGTGTGTGGGGGGACA+TGG - 14523:66168-66187 MS.gene073161:intergenic 60.0%


Chromosome Type Strat End Strand Name
14523 gene 65398 67487 65398 ID=MS.gene073161
14523 mRNA 65398 67487 65398 ID=MS.gene073161.t1;Parent=MS.gene073161
14523 exon 65398 65475 65398 ID=MS.gene073161.t1.exon1;Parent=MS.gene073161.t1
14523 CDS 65398 65475 65398 ID=cds.MS.gene073161.t1;Parent=MS.gene073161.t1
14523 exon 65573 65764 65573 ID=MS.gene073161.t1.exon2;Parent=MS.gene073161.t1
14523 CDS 65573 65764 65573 ID=cds.MS.gene073161.t1;Parent=MS.gene073161.t1
14523 exon 66933 67487 66933 ID=MS.gene073161.t1.exon3;Parent=MS.gene073161.t1
14523 CDS 66933 67487 66933 ID=cds.MS.gene073161.t1;Parent=MS.gene073161.t1
Gene Sequence

>MS.gene073161

ATGACCAAAGCTATCAATAATGAAGCTCGGATTGGTGCTTCTATACTTCGATTGTTCTTCCATGATTGCTTTGTAAATGTAAGCTTACTTTAAGATAGTATTAATGTTGAAAAATAATTTGTTTATTTGCATTATACATTAACATGTGAGTTTTGTTTCCATGTTTATTTTGTAGGGATGCGATGGATCAATTTTATTGGATGACACTGCCACCTTTACCGGTGAGAAAAATGCCGCACCTAACAAAAACTCAGCTAGGGGTTTTGAAGTGATTGATACCATTAAAACCAGTGTTGAAGCTGCTTGCAGTGCCACTGTCTCTTGTGCTGATATTCTAGCACTTGCAACTAGAGATGGAATTGCTCTCGTGAGTCACCCATTTCTTTCTTCATTTTTCTTTTCCCTTGTGTTGTTGATAGTTTACCAACTAAATTTACAAATTAAGTGCTAAAAAATAAAAAATTACAGATTCAAACTCGTGACACGACATATTTAAACTATACTTGCGCGATAATTCTTTCCGTTTTAGAGATGTTATTGATTTCTTTTCTTGATATGGTGTTTTTTTTTTTTGAAGAGTTTTTTTTTTCTTTCTGTGGTCGAGGTTTGAACCACAGACCTTACATATATTATATATTATGTCTTTTTCTTTCTTACTTTGGATTGAAATTATACGATAAGATTTCAATCTCCGGTCATTCTCAAGCAGGTAACTTGATGTTTATCGTTTCCTATAATTTTGTTTTTGGCATGGGCTTGTTTTCAAACCATGTCCCCCCACACACTCTCTTTTAACCTGTTTTCACATATTTTTGATCGTCATCGTGTCAACTCTTGTTATTGTATGGGACCCTCCAGATTTTGCACAATAATGCATCACATAATACACATGATCAAATTATATATGGAAAAAAAAAAAAAAAAAAACAGAAGTACCACAAAATACAACCAGTCTCTTTATCAAAAGATCACAAATCACTCATTATACTGAAAAGGAAATTATCAAAAGGGTTCTATTATAAGATGAAAGGTGTACACTTGTTTAAACCTTAGTCCGATCTTTTCTTATTTTATTTAATCAAGGACTTTCTTGATACGATAGTGCCTCATGTTTAACACTATTGTACTAGATACATAAATATAATTGGTAACACGATTCATAGGTTTATACCCATAATTAGTTAATATATTGAGTTTAATTCATTCGTATAAAATCAATTTCTAAGATGATGGACGTCACTATTTATACACTCTAATTAAATTTTATCTTTATTTTATGCAAGACTTGAGTTTTTCCAATACATTTCTCTAATTATATGATTAAATTTAATGACAAGAGAATTAGAGATGAATTTTATTTATCTTCTCTAAATTTAATTGCTAATTCTATTTTTTATATATCCCTTCCAAAAAAAAAACAAGTACAAAATACAAGTAGCAAATATAAAATATTGTCTTATGGTGTTTTATACTAGTTTTGATTCATCATAACTTTCTTAATCTCAATAATTCATTTAAATTAATTTATTTTGTAGCTTGGAGGACCAACCTGGGTAGTACCACTTGGAAGAAGAGATGCAAGAACAGCAAGTCAAAGTGCAGCAAACAGCCAAATCCCTGGACCATCTTCTGACCTATCCACACTCACTACCATGTTTAGAAACAAAGGTCTAACATTAAATGACCTTACTGTCCTTTCTGGTGCACACACCATAGGTCAAGCAGAATGTCAATTTTTCAGAACTCGTATATACAATGAAACCAACATTGACACAAACTTTGCAACCTTAAGAAAATCAAATTGTCCTACTTCTGGTGGTGACATAAATTTGGCACCTCTTGATTCTGTCTCTCCAGTTACTTTTGACAACAATTACTATAATGACCTTGTTGCTAATAAAGGACTTCTTCATTCTGATCAAGCTCTTTTCAATGGTGTTGGTTCTCAAGTTTCTTTGGTTAGGACTTATAGTAGAAATAATATTGCTTTTAAAAGAGACTTTGCAGCTGCTATGGTGAAGATGAGTAGAATTAGTCCTCTAACTGGGACTAATGGGGAGATTAGAAAGAATTGCAGGCTTGTGAACTAA
Protein sequence

>MS.gene073161.t1

MTKAINNEARIGASILRLFFHDCFVNGCDGSILLDDTATFTGEKNAAPNKNSARGFEVIDTIKTSVEAACSATVSCADILALATRDGIALLGGPTWVVPLGRRDARTASQSAANSQIPGPSSDLSTLTTMFRNKGLTLNDLTVLSGAHTIGQAECQFFRTRIYNETNIDTNFATLRKSNCPTSGGDINLAPLDSVSPVTFDNNYYNDLVANKGLLHSDQALFNGVGSQVSLVRTYSRNNIAFKRDFAAAMVKMSRISPLTGTNGEIRKNCRLVN