Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073576.t1 | XP_024631476.1 | 91.5 | 966 | 51 | 3 | 1 | 963 | 1 | 938 | 0.00E+00 | 1592.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073576.t1 | A4FUF0 | 37.0 | 92 | 53 | 3 | 312 | 403 | 8 | 94 | 2.5e-08 | 62.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073576.t1 | A0A072VHV7 | 91.5 | 966 | 51 | 3 | 1 | 963 | 1 | 938 | 0.0e+00 | 1592.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene045232 | MS.gene073576 | PPI |
| MS.gene045233 | MS.gene073576 | PPI |
| MS.gene073576 | MS.gene037044 | PPI |
| MS.gene79130 | MS.gene073576 | PPI |
| MS.gene24697 | MS.gene073576 | PPI |
| MS.gene95527 | MS.gene073576 | PPI |
| MS.gene07741 | MS.gene073576 | PPI |
| MS.gene46640 | MS.gene073576 | PPI |
| MS.gene073576 | MS.gene007196 | PPI |
| MS.gene050299 | MS.gene073576 | PPI |
| MS.gene92710 | MS.gene073576 | PPI |
| MS.gene073576 | MS.gene55120 | PPI |
| MS.gene75575 | MS.gene073576 | PPI |
| MS.gene77911 | MS.gene073576 | PPI |
| MS.gene067033 | MS.gene073576 | PPI |
| MS.gene073576 | MS.gene045235 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073576.t1 | MTR_1g049120 | 92.627 | 963 | 46 | 2 | 1 | 963 | 1 | 938 | 0.0 | 1806 |
| MS.gene073576.t1 | MTR_4g036445 | 59.560 | 591 | 175 | 9 | 73 | 604 | 33 | 618 | 0.0 | 664 |
| MS.gene073576.t1 | MTR_1g072780 | 54.545 | 682 | 247 | 14 | 303 | 963 | 355 | 994 | 0.0 | 662 |
| MS.gene073576.t1 | MTR_2g047912 | 61.707 | 457 | 106 | 10 | 494 | 937 | 272 | 672 | 1.28e-162 | 493 |
| MS.gene073576.t1 | MTR_2g047912 | 39.016 | 305 | 115 | 8 | 1 | 266 | 1 | 273 | 1.50e-35 | 145 |
| MS.gene073576.t1 | MTR_2g104120 | 30.590 | 644 | 353 | 16 | 310 | 934 | 258 | 826 | 3.51e-84 | 290 |
| MS.gene073576.t1 | MTR_1g066890 | 31.696 | 672 | 345 | 20 | 301 | 934 | 307 | 902 | 3.14e-83 | 289 |
| MS.gene073576.t1 | MTR_2g104980 | 55.340 | 103 | 45 | 1 | 310 | 412 | 233 | 334 | 1.00e-35 | 142 |
| MS.gene073576.t1 | MTR_6g005840 | 28.667 | 450 | 263 | 16 | 92 | 493 | 14 | 453 | 1.30e-27 | 120 |
| MS.gene073576.t1 | MTR_6g005840 | 28.640 | 419 | 240 | 16 | 114 | 493 | 13 | 411 | 7.45e-27 | 118 |
| MS.gene073576.t1 | MTR_6g005960 | 35.233 | 193 | 121 | 4 | 306 | 497 | 208 | 397 | 5.83e-25 | 111 |
| MS.gene073576.t1 | MTR_7g113180 | 32.402 | 179 | 117 | 3 | 310 | 485 | 87 | 264 | 6.45e-24 | 109 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073576.t1 | AT3G09670 | 36.856 | 388 | 193 | 12 | 309 | 646 | 196 | 581 | 3.66e-60 | 219 |
| MS.gene073576.t1 | AT3G09670 | 36.856 | 388 | 193 | 12 | 309 | 646 | 196 | 581 | 3.66e-60 | 219 |
| MS.gene073576.t1 | AT5G02950 | 39.100 | 289 | 145 | 8 | 304 | 584 | 89 | 354 | 3.23e-53 | 197 |
| MS.gene073576.t1 | AT5G02950 | 53.846 | 78 | 36 | 0 | 855 | 932 | 546 | 623 | 7.25e-18 | 89.0 |
| MS.gene073576.t1 | AT5G02950 | 39.100 | 289 | 145 | 8 | 304 | 584 | 89 | 354 | 3.23e-53 | 197 |
| MS.gene073576.t1 | AT5G02950 | 53.846 | 78 | 36 | 0 | 855 | 932 | 546 | 623 | 7.25e-18 | 89.0 |
| MS.gene073576.t1 | AT3G54760 | 38.261 | 345 | 138 | 9 | 598 | 939 | 470 | 742 | 4.69e-53 | 199 |
| MS.gene073576.t1 | AT3G54760 | 38.261 | 345 | 138 | 9 | 598 | 939 | 501 | 773 | 8.47e-53 | 199 |
| MS.gene073576.t1 | AT5G40340 | 36.683 | 199 | 113 | 7 | 310 | 501 | 125 | 317 | 2.40e-25 | 114 |
| MS.gene073576.t1 | AT5G40340 | 36.683 | 199 | 113 | 7 | 310 | 501 | 125 | 317 | 2.84e-25 | 113 |
| MS.gene073576.t1 | AT5G27650 | 33.702 | 181 | 112 | 5 | 310 | 485 | 171 | 348 | 1.58e-23 | 108 |
| MS.gene073576.t1 | AT3G05430 | 27.737 | 274 | 185 | 7 | 219 | 485 | 43 | 310 | 2.27e-22 | 104 |
| MS.gene073576.t1 | AT3G05430 | 27.737 | 274 | 185 | 7 | 219 | 485 | 43 | 310 | 2.35e-22 | 104 |
| MS.gene073576.t1 | AT3G27860 | 28.283 | 297 | 176 | 14 | 307 | 593 | 58 | 327 | 3.53e-15 | 80.5 |
| MS.gene073576.t1 | AT3G27860 | 28.283 | 297 | 176 | 14 | 307 | 593 | 58 | 327 | 3.53e-15 | 80.5 |
Find 206 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTATTTCGTCGCATATTT+TGG | 0.097709 | 1.1:+34046098 | MS.gene073576:CDS |
| CCTCCACAATGTTGTATTTC+TGG | 0.135555 | 1.1:-34046533 | None:intergenic |
| GCTAAGAAGTTCAACATATT+TGG | 0.166046 | 1.1:+34047799 | MS.gene073576:CDS |
| AACAAAATGTTTAAGCGTTT+TGG | 0.179710 | 1.1:+34047679 | MS.gene073576:CDS |
| GACCATATTAACTTCAAAAT+TGG | 0.197232 | 1.1:-34047923 | None:intergenic |
| TTCTCTCTCAGATATGGTTT+GGG | 0.239508 | 1.1:+34045986 | MS.gene073576:CDS |
| TCTTCAAATTCAAATGTTTC+AGG | 0.243949 | 1.1:-34047283 | None:intergenic |
| TTTGTTAAGGTTTGCTTCTA+AGG | 0.244285 | 1.1:-34047662 | None:intergenic |
| GTCTCAAGACGAGTCGAATA+TGG | 0.258530 | 1.1:+34046248 | MS.gene073576:CDS |
| GGTGATTCTGTTGGGGTAGT+TGG | 0.264248 | 1.1:+34045049 | MS.gene073576:CDS |
| TACGGCTGGCTTTGATCGTT+TGG | 0.305489 | 1.1:+34046448 | MS.gene073576:CDS |
| TTTCTCTCTCAGATATGGTT+TGG | 0.312975 | 1.1:+34045985 | MS.gene073576:CDS |
| TGAGTTGGGTAACGTTGTTT+TGG | 0.316781 | 1.1:+34045147 | MS.gene073576:CDS |
| GTGACCCAGTTCCAACTATT+GGG | 0.320240 | 1.1:-34047261 | None:intergenic |
| GGTGACCCAGTTCCAACTAT+TGG | 0.324538 | 1.1:-34047262 | None:intergenic |
| CGATTAACTTGGGCTGGCTT+TGG | 0.335599 | 1.1:-34047511 | None:intergenic |
| TCAGGTGAAACCAGATTATC+TGG | 0.347288 | 1.1:-34046764 | None:intergenic |
| GGCTTTGGTGACTTGGAAGC+TGG | 0.350982 | 1.1:-34047496 | None:intergenic |
| ATCATGTCATAGGTGTCTTT+AGG | 0.355766 | 1.1:-34046290 | None:intergenic |
| AGTATCCGGTTGAGGAATCT+AGG | 0.358039 | 1.1:+34045080 | MS.gene073576:CDS |
| GGTGACTTGGAAGCTGGCTT+TGG | 0.358660 | 1.1:-34047490 | None:intergenic |
| TGGTTTGTGGTGATTCTGTT+GGG | 0.360124 | 1.1:+34045041 | MS.gene073576:CDS |
| AAGATATGAGCGACACATAT+TGG | 0.375633 | 1.1:+34047302 | MS.gene073576:CDS |
| AACAATCGGTGACTTCAATA+TGG | 0.380581 | 1.1:+34045219 | MS.gene073576:CDS |
| AATCACACTGCAGAGGTTAA+AGG | 0.381260 | 1.1:+34045559 | MS.gene073576:CDS |
| CCATCACCATCAGGAGAATC+TGG | 0.383648 | 1.1:-34046734 | None:intergenic |
| CGGATATATTTGGTATTAAG+AGG | 0.384275 | 1.1:+34047230 | MS.gene073576:CDS |
| TGCACTGGTTTCTGTTGCAC+TGG | 0.388524 | 1.1:-34047376 | None:intergenic |
| TTGGGCTGGCTTTGGTGACT+TGG | 0.390533 | 1.1:-34047503 | None:intergenic |
| AGAAGTCACCCATGGTGGCC+TGG | 0.392403 | 1.1:+34046017 | MS.gene073576:CDS |
| GGTGACTTAACAGCTGGCTT+TGG | 0.393998 | 1.1:-34047469 | None:intergenic |
| TTCCGTGATGGTTGTTGCAC+TGG | 0.394785 | 1.1:-34047406 | None:intergenic |
| AGAGATCGAAAACCATTTCC+TGG | 0.398045 | 1.1:-34047900 | None:intergenic |
| CCCAACTGATGAGGATGATC+AGG | 0.400132 | 1.1:+34047042 | MS.gene073576:CDS |
| CACATACCACAGACCCATCT+AGG | 0.400940 | 1.1:-34045003 | None:intergenic |
| TCACTGCGTCACCTTCTATA+AGG | 0.403119 | 1.1:+34046942 | MS.gene073576:CDS |
| TAGATGGGTCTGTGGTATGT+GGG | 0.406634 | 1.1:+34045005 | MS.gene073576:CDS |
| AACCTCTGCAGTGTGATTCA+CGG | 0.409327 | 1.1:-34045554 | None:intergenic |
| TACAATCGGTGACTTTAGTA+TGG | 0.412273 | 1.1:+34045288 | MS.gene073576:CDS |
| TGTGAGCGGTGTTTCTGCTT+TGG | 0.414830 | 1.1:+34045456 | MS.gene073576:CDS |
| TCTGTTTCAGATTCCTTAAG+TGG | 0.417444 | 1.1:-34047703 | None:intergenic |
| CTGTAGTTGTGGCTGCTGAT+TGG | 0.424377 | 1.1:+34047191 | MS.gene073576:CDS |
| GGCTTTGGTGACTTAACAGC+TGG | 0.426756 | 1.1:-34047475 | None:intergenic |
| GAAGTCACCCATGGTGGCCT+GGG | 0.429264 | 1.1:+34046018 | MS.gene073576:CDS |
| GCCGCAGTAGTTGGTAGTAC+AGG | 0.435426 | 1.1:+34045256 | MS.gene073576:CDS |
| ATTCTGTTGGGGTAGTTGGT+GGG | 0.439002 | 1.1:+34045053 | MS.gene073576:CDS |
| TCAAAGTCTCCATCTGCCTT+TGG | 0.439286 | 1.1:-34046986 | None:intergenic |
| ACAAAGTCATCGTTTAAAAT+CGG | 0.439705 | 1.1:+34046890 | MS.gene073576:CDS |
| GTGGTTTGTGGTGATTCTGT+TGG | 0.443493 | 1.1:+34045040 | MS.gene073576:CDS |
| TATCTTGTGATCTGCGACCT+CGG | 0.446561 | 1.1:-34045320 | None:intergenic |
| CTAGATGGGTCTGTGGTATG+TGG | 0.448465 | 1.1:+34045004 | MS.gene073576:CDS |
| CGAGGAGTCAAATGGTGGTC+AGG | 0.449458 | 1.1:+34045821 | MS.gene073576:CDS |
| TGGTCGGACTCCAGATAATC+TGG | 0.450902 | 1.1:+34046754 | MS.gene073576:CDS |
| AGACACATCTGATTCATTAT+CGG | 0.452049 | 1.1:-34047017 | None:intergenic |
| GTGAGAGATGAAGCAGTAGT+TGG | 0.452544 | 1.1:+34045178 | MS.gene073576:CDS |
| CTAGAACACTTCCTTATAGA+AGG | 0.452692 | 1.1:-34046953 | None:intergenic |
| GTTGGTGGTGAAACCCTAGA+TGG | 0.452873 | 1.1:+34044989 | MS.gene073576:CDS |
| GCTTTAGCAGGTAGTTCTGT+AGG | 0.454456 | 1.1:+34045364 | MS.gene073576:CDS |
| CACCTGAACATTCCAAGAAA+AGG | 0.455137 | 1.1:+34046780 | MS.gene073576:CDS |
| AGTTGGTGGGACCGAGTATC+CGG | 0.455528 | 1.1:+34045066 | MS.gene073576:CDS |
| GATTCTGTTGGGGTAGTTGG+TGG | 0.455837 | 1.1:+34045052 | MS.gene073576:CDS |
| TAGTTCAGAAATAGTTCATC+AGG | 0.456384 | 1.1:+34045923 | MS.gene073576:CDS |
| TGCACTGGTTTCTGTTGCGC+TGG | 0.460959 | 1.1:-34047361 | None:intergenic |
| GGCTTACGATTAACTTGGGC+TGG | 0.461800 | 1.1:-34047517 | None:intergenic |
| AATCTGGAGTCCCATTCATT+AGG | 0.464940 | 1.1:-34046718 | None:intergenic |
| TATAGGGCTTACGATTAACT+TGG | 0.466075 | 1.1:-34047522 | None:intergenic |
| AAAGCGTAAATATAAGTTCA+AGG | 0.468189 | 1.1:+34046655 | MS.gene073576:CDS |
| GACACATCTGATTCATTATC+GGG | 0.469147 | 1.1:-34047016 | None:intergenic |
| TATTGAGACTGAGGAAAACT+TGG | 0.469804 | 1.1:+34045713 | MS.gene073576:CDS |
| TTTGGTGACTTAGCAGAGAC+TGG | 0.474173 | 1.1:-34047451 | None:intergenic |
| TCTTAAAGACCACTCTTGCC+CGG | 0.475118 | 1.1:-34047744 | None:intergenic |
| CTCCATCTGCCTTTGGAGAT+CGG | 0.475922 | 1.1:-34046979 | None:intergenic |
| AATCGGTGATTGTATTCGTC+GGG | 0.480709 | 1.1:+34046907 | MS.gene073576:CDS |
| GAGTGCTATTAATTGTGCTT+TGG | 0.482515 | 1.1:+34046220 | MS.gene073576:CDS |
| GCAACGGCGAATGGCTCCCT+TGG | 0.483314 | 1.1:-34045776 | None:intergenic |
| ACAACCCTAGATTCCTCAAC+CGG | 0.485275 | 1.1:-34045085 | None:intergenic |
| TCTCAAGACGAGTCGAATAT+GGG | 0.485338 | 1.1:+34046249 | MS.gene073576:CDS |
| GCTGCCGAGGCCGCAGTAGT+TGG | 0.486116 | 1.1:+34045247 | MS.gene073576:CDS |
| TCCTGATCATCCTCATCAGT+TGG | 0.488623 | 1.1:-34047043 | None:intergenic |
| GTTGTAGAATTTGAAGAAGC+CGG | 0.488694 | 1.1:+34045103 | MS.gene073576:CDS |
| GCTATCTTCACTTCAGCTTG+TGG | 0.491218 | 1.1:+34047096 | MS.gene073576:CDS |
| GAAGCTTTGAACAGTGCACT+TGG | 0.493568 | 1.1:-34047856 | None:intergenic |
| ACCACCAACTTTCACACCAT+GGG | 0.493614 | 1.1:-34044975 | None:intergenic |
| CATTTCGGAGTCATCGGCGT+AGG | 0.493727 | 1.1:-34046822 | None:intergenic |
| TTGTTAAGGTTTGCTTCTAA+GGG | 0.496576 | 1.1:-34047661 | None:intergenic |
| AGGATGTCAGACCTAATGAA+TGG | 0.497931 | 1.1:+34046707 | MS.gene073576:CDS |
| TGCAACACAAGACCAGGAAA+TGG | 0.498131 | 1.1:+34047888 | MS.gene073576:CDS |
| GGAGTCCGACCATCACCATC+AGG | 0.498959 | 1.1:-34046743 | None:intergenic |
| TTCCATCACGCAACGGCGAA+TGG | 0.502072 | 1.1:-34045785 | None:intergenic |
| GAATGCGGCGGCAGTTGAGT+TGG | 0.502816 | 1.1:+34045132 | MS.gene073576:CDS |
| CTTTAGCAGGTAGTTCTGTA+GGG | 0.504598 | 1.1:+34045365 | MS.gene073576:CDS |
| AATGCGGCGGCAGTTGAGTT+GGG | 0.505664 | 1.1:+34045133 | MS.gene073576:CDS |
| ATCTTGCATTTCGGAGTCAT+CGG | 0.509912 | 1.1:-34046828 | None:intergenic |
| AGATGGGTCTGTGGTATGTG+GGG | 0.514040 | 1.1:+34045006 | MS.gene073576:CDS |
| AAACATGCGCTTGTGAAGCC+TGG | 0.515535 | 1.1:+34045900 | MS.gene073576:CDS |
| CACTGTGCATCCATCAAAGA+AGG | 0.517034 | 1.1:+34046679 | MS.gene073576:CDS |
| GGTCATAATGAAGTGGTTTG+TGG | 0.517248 | 1.1:+34045028 | MS.gene073576:CDS |
| ATTCCTATGCTCTTCAATTG+TGG | 0.519415 | 1.1:-34046180 | None:intergenic |
| TTGTAGAATTTGAAGAAGCC+GGG | 0.519547 | 1.1:+34045104 | MS.gene073576:CDS |
| CACTTGGAGTGTAATTAAGC+TGG | 0.521123 | 1.1:-34047840 | None:intergenic |
| AGCCATTCGCCGTTGCGTGA+TGG | 0.521303 | 1.1:+34045783 | MS.gene073576:CDS |
| TCAGAAAAGTATACTCTCCA+AGG | 0.523646 | 1.1:-34047129 | None:intergenic |
| GCGACACATATTGGACTGAC+AGG | 0.524575 | 1.1:+34047311 | MS.gene073576:CDS |
| CTATCCGAGTTTCCTACGGC+TGG | 0.525255 | 1.1:+34046434 | MS.gene073576:CDS |
| CCTGATCATCCTCATCAGTT+GGG | 0.525465 | 1.1:-34047042 | None:intergenic |
| AAGTTGATAGAGTAAGCAGC+CGG | 0.526372 | 1.1:+34047725 | MS.gene073576:CDS |
| AAGTTCATAACAAGCTCAGC+AGG | 0.528013 | 1.1:-34047619 | None:intergenic |
| AGCAATGATGATGCTTTAGC+AGG | 0.528080 | 1.1:+34045352 | MS.gene073576:CDS |
| ATTTCGGAGTCATCGGCGTA+GGG | 0.529828 | 1.1:-34046821 | None:intergenic |
| TTTCAGAAATTCTGTAGTTG+TGG | 0.530415 | 1.1:+34047180 | MS.gene073576:CDS |
| ACATATTCTATAAGATTCAA+AGG | 0.532546 | 1.1:-34046404 | None:intergenic |
| GGATGTCAGACCTAATGAAT+GGG | 0.533475 | 1.1:+34046708 | MS.gene073576:CDS |
| AGTAAGCAGCCGGGCAAGAG+TGG | 0.535181 | 1.1:+34047735 | MS.gene073576:CDS |
| AAACTAAGAGATAGAAAAGC+CGG | 0.536173 | 1.1:+34045876 | MS.gene073576:CDS |
| AGATTCCTCAACCGGATACT+CGG | 0.539506 | 1.1:-34045077 | None:intergenic |
| CCGCAGTAGTTGGTAGTACA+GGG | 0.543637 | 1.1:+34045257 | MS.gene073576:CDS |
| GACGGATCAAATATCTGCCC+AGG | 0.544596 | 1.1:-34046035 | None:intergenic |
| TTTGGAGCTTGTGACTGCTA+AGG | 0.547748 | 1.1:+34046466 | MS.gene073576:CDS |
| TTGGGGACAAAACATTTGCA+TGG | 0.547879 | 1.1:+34046117 | MS.gene073576:CDS |
| GTCAGACAGTAGAGAACACC+GGG | 0.548651 | 1.1:+34046318 | MS.gene073576:CDS |
| TTCGCCGTTGCGTGATGGAA+AGG | 0.548686 | 1.1:+34045788 | MS.gene073576:CDS |
| TGCCGCCGCATTCTCACTCC+CGG | 0.551666 | 1.1:-34045122 | None:intergenic |
| CTGCCAAAAGCAAAAGAAGA+AGG | 0.552516 | 1.1:+34045957 | MS.gene073576:CDS |
| TCTCTCTCAGATATGGTTTG+GGG | 0.553140 | 1.1:+34045987 | MS.gene073576:CDS |
| AACACTATCCGAGTTTCCTA+CGG | 0.556285 | 1.1:+34046430 | MS.gene073576:CDS |
| CACCACCAACTTTCACACCA+TGG | 0.558331 | 1.1:-34044976 | None:intergenic |
| GCCCTCTCAGATGCATCTGA+CGG | 0.559014 | 1.1:-34046053 | None:intergenic |
| CCAGATTCTCCTGATGGTGA+TGG | 0.559245 | 1.1:+34046734 | MS.gene073576:CDS |
| AAATCGGTGATTGTATTCGT+CGG | 0.559399 | 1.1:+34046906 | MS.gene073576:CDS |
| ATGACTCCGAAATGCAAGAT+GGG | 0.560146 | 1.1:+34046831 | MS.gene073576:CDS |
| GACACTCAAGTTACTGACCA+AGG | 0.560989 | 1.1:+34045759 | MS.gene073576:CDS |
| TGGGACCGAGTATCCGGTTG+AGG | 0.563199 | 1.1:+34045072 | MS.gene073576:CDS |
| TGAACTATTTCTGAACTACC+AGG | 0.564289 | 1.1:-34045918 | None:intergenic |
| TGACCCAGTTCCAACTATTG+GGG | 0.565841 | 1.1:-34047260 | None:intergenic |
| ATATCTGCCCAGGCCACCAT+GGG | 0.565877 | 1.1:-34046025 | None:intergenic |
| CAATATGGTGGATGCTGCCG+AGG | 0.567224 | 1.1:+34045234 | MS.gene073576:CDS |
| GATGACTCCGAAATGCAAGA+TGG | 0.571916 | 1.1:+34046830 | MS.gene073576:CDS |
| AAAGTCAACGAGGAGTCAAA+TGG | 0.574642 | 1.1:+34045813 | MS.gene073576:CDS |
| CAGAAAAGTATACTCTCCAA+GGG | 0.576757 | 1.1:-34047128 | None:intergenic |
| ACTTATTTCTTGTTGAACCC+CGG | 0.576846 | 1.1:-34046336 | None:intergenic |
| GACCGATCTCCAAAGGCAGA+TGG | 0.577314 | 1.1:+34046977 | MS.gene073576:CDS |
| AAAGCCAGCCGTAGGAAACT+CGG | 0.577817 | 1.1:-34046438 | None:intergenic |
| AATAAGTATCACACATGAGG+TGG | 0.580958 | 1.1:+34046352 | MS.gene073576:CDS |
| CCTTGAAAAGTGCAACTCAA+AGG | 0.582951 | 1.1:+34045411 | MS.gene073576:CDS |
| GGGACTCCAGATTCTCCTGA+TGG | 0.585166 | 1.1:+34046728 | MS.gene073576:CDS |
| ACAGTTGTCGAAACAACAAT+CGG | 0.585549 | 1.1:+34045205 | MS.gene073576:CDS |
| TTCTAGTGACCGATCTCCAA+AGG | 0.585712 | 1.1:+34046970 | MS.gene073576:CDS |
| GGTTTGTGGTGATTCTGTTG+GGG | 0.587388 | 1.1:+34045042 | MS.gene073576:CDS |
| TGTTGATGCAACACAAGACC+AGG | 0.588104 | 1.1:+34047882 | MS.gene073576:CDS |
| AATATCTGCCCAGGCCACCA+TGG | 0.588370 | 1.1:-34046026 | None:intergenic |
| TTCTGAAAGCAATCCTGCCG+AGG | 0.595525 | 1.1:+34047558 | MS.gene073576:CDS |
| TCTCCACAATTGAAGAGCAT+AGG | 0.596184 | 1.1:+34046177 | MS.gene073576:CDS |
| ACTACCAACTACTGCGGCCT+CGG | 0.596716 | 1.1:-34045251 | None:intergenic |
| GTGACCCATGGTGTGAAAGT+TGG | 0.597666 | 1.1:+34044971 | MS.gene073576:CDS |
| ACAGGGGTCGAAACTACAAT+CGG | 0.598602 | 1.1:+34045274 | MS.gene073576:CDS |
| TAGTATGGTGGATGCTGCCG+AGG | 0.599552 | 1.1:+34045303 | MS.gene073576:CDS |
| GTATCCGGTTGAGGAATCTA+GGG | 0.602732 | 1.1:+34045081 | MS.gene073576:CDS |
| ACATACCACAGACCCATCTA+GGG | 0.603316 | 1.1:-34045002 | None:intergenic |
| AAGCACAATTAATAGCACTC+TGG | 0.605736 | 1.1:-34046217 | None:intergenic |
| ATAGGGCTTACGATTAACTT+GGG | 0.608401 | 1.1:-34047521 | None:intergenic |
| ACCCATGGTGTGAAAGTTGG+TGG | 0.609319 | 1.1:+34044974 | MS.gene073576:CDS |
| ACATTGTGGAGGTGTTGACC+CGG | 0.610706 | 1.1:+34046544 | MS.gene073576:CDS |
| ATTCTCCTGATGGTGATGGT+CGG | 0.611694 | 1.1:+34046738 | MS.gene073576:CDS |
| AATCGGTGACTTCAATATGG+TGG | 0.618929 | 1.1:+34045222 | MS.gene073576:CDS |
| TAAGGGAACAGAATTGAGCT+CGG | 0.619176 | 1.1:-34047644 | None:intergenic |
| TAAGAAATGTGTAGATGCAG+AGG | 0.619624 | 1.1:+34047762 | MS.gene073576:CDS |
| AATCGGTGACTTTAGTATGG+TGG | 0.621137 | 1.1:+34045291 | MS.gene073576:CDS |
| AGAAATAAGTATCACACATG+AGG | 0.622833 | 1.1:+34046349 | MS.gene073576:CDS |
| TCCGTCAGATGCATCTGAGA+GGG | 0.624122 | 1.1:+34046052 | MS.gene073576:CDS |
| AGTTGATAGAGTAAGCAGCC+GGG | 0.624544 | 1.1:+34047726 | MS.gene073576:CDS |
| AACCAGTGCAACAACCATCA+CGG | 0.625880 | 1.1:+34047404 | MS.gene073576:CDS |
| TGTGTCTCTCCCAACTGATG+AGG | 0.631262 | 1.1:+34047033 | MS.gene073576:CDS |
| AAACGATCAAAGCCAGCCGT+AGG | 0.635310 | 1.1:-34046446 | None:intergenic |
| TTGGTGGTGAAACCCTAGAT+GGG | 0.636238 | 1.1:+34044990 | MS.gene073576:CDS |
| GATGGGTCTGTGGTATGTGG+GGG | 0.641914 | 1.1:+34045007 | MS.gene073576:CDS |
| GCATTGTCATCTATATAACC+AGG | 0.644206 | 1.1:-34047595 | None:intergenic |
| ATAGACGGCGACGATCAACA+AGG | 0.645880 | 1.1:+34045514 | MS.gene073576:CDS |
| CTTGTGGCACAAGAACCCCT+TGG | 0.646167 | 1.1:+34047112 | MS.gene073576:CDS |
| GTCGGTGTCTATTGAGACTG+AGG | 0.648701 | 1.1:+34045704 | MS.gene073576:CDS |
| ATCCGTCAGATGCATCTGAG+AGG | 0.653593 | 1.1:+34046051 | MS.gene073576:CDS |
| TCAACAATCTGATGTACATG+AGG | 0.653763 | 1.1:+34045483 | MS.gene073576:CDS |
| GACCCAGTTCCAACTATTGG+GGG | 0.653992 | 1.1:-34047259 | None:intergenic |
| TTTAGCAGGTAGTTCTGTAG+GGG | 0.655647 | 1.1:+34045366 | MS.gene073576:CDS |
| GCAAAGTGAGAAGTCACCCA+TGG | 0.661126 | 1.1:+34046009 | MS.gene073576:CDS |
| AGAAGCCGGGAGTGAGAATG+CGG | 0.661274 | 1.1:+34045117 | MS.gene073576:CDS |
| ACACTCAAGTTACTGACCAA+GGG | 0.665022 | 1.1:+34045760 | MS.gene073576:CDS |
| AGTCAGACAGTAGAGAACAC+CGG | 0.667248 | 1.1:+34046317 | MS.gene073576:CDS |
| CGACACATATTGGACTGACA+GGG | 0.669789 | 1.1:+34047312 | MS.gene073576:CDS |
| CATGAGGAGATACAAATAGA+CGG | 0.670281 | 1.1:+34045499 | MS.gene073576:CDS |
| GTCAACGAGGAGTCAAATGG+TGG | 0.673514 | 1.1:+34045816 | MS.gene073576:CDS |
| AGCCGGGAGTGAGAATGCGG+CGG | 0.674067 | 1.1:+34045120 | MS.gene073576:CDS |
| ACTGACAGGGTCATTGACAA+TGG | 0.674175 | 1.1:+34047325 | MS.gene073576:CDS |
| TCAGAAACCACTGTGACCCA+TGG | 0.675916 | 1.1:+34044959 | MS.gene073576:CDS |
| AAGTGAGAAGTCACCCATGG+TGG | 0.677906 | 1.1:+34046012 | MS.gene073576:CDS |
| TGAAACCCTAGATGGGTCTG+TGG | 0.684006 | 1.1:+34044997 | MS.gene073576:CDS |
| AACCGTGAATCACACTGCAG+AGG | 0.687880 | 1.1:+34045552 | MS.gene073576:CDS |
| TTTCACACCATGGGTCACAG+TGG | 0.691236 | 1.1:-34044966 | None:intergenic |
| TAGACGGCGACGATCAACAA+GGG | 0.693450 | 1.1:+34045515 | MS.gene073576:CDS |
| CGCAGTAGTTGGTAGTACAG+GGG | 0.698998 | 1.1:+34045258 | MS.gene073576:CDS |
| TTGCCAGAAATACAACATTG+TGG | 0.702327 | 1.1:+34046530 | MS.gene073576:CDS |
| TTGTCATCTATATAACCAGG+AGG | 0.713037 | 1.1:-34047592 | None:intergenic |
| CCAGAAATACAACATTGTGG+AGG | 0.718025 | 1.1:+34046533 | MS.gene073576:CDS |
| AGAAAAGTATACTCTCCAAG+GGG | 0.750501 | 1.1:-34047127 | None:intergenic |
| CCCTGTACTACCAACTACTG+CGG | 0.751957 | 1.1:-34045257 | None:intergenic |
| ATAGCTGACAACGATGTGAG+CGG | 0.753803 | 1.1:+34045442 | MS.gene073576:CDS |
| TCAGACAGTAGAGAACACCG+GGG | 0.900900 | 1.1:+34046319 | MS.gene073576:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATATTCTATAAGATTCAA+AGG | - | chr1.1:34046407-34046426 | None:intergenic | 20.0% |
| !! | ATTGAAAAAGTTAATGAAGT+TGG | + | chr1.1:34045846-34045865 | MS.gene073576:CDS | 20.0% |
| !! | TTGAAAAAGTTAATGAAGTT+GGG | + | chr1.1:34045847-34045866 | MS.gene073576:CDS | 20.0% |
| ! | AAAGCGTAAATATAAGTTCA+AGG | + | chr1.1:34046655-34046674 | MS.gene073576:CDS | 25.0% |
| ! | GACCATATTAACTTCAAAAT+TGG | - | chr1.1:34047926-34047945 | None:intergenic | 25.0% |
| ! | TCTTCAAATTCAAATGTTTC+AGG | - | chr1.1:34047286-34047305 | None:intergenic | 25.0% |
| !! | AACAAAATGTTTAAGCGTTT+TGG | + | chr1.1:34047679-34047698 | MS.gene073576:CDS | 25.0% |
| !! | AACGCTTAAACATTTTGTTA+AGG | - | chr1.1:34047678-34047697 | None:intergenic | 25.0% |
| !! | ACAAAGTCATCGTTTAAAAT+CGG | + | chr1.1:34046890-34046909 | MS.gene073576:CDS | 25.0% |
| !! | ACTTATATTTACGCTTTTGA+CGG | - | chr1.1:34046652-34046671 | None:intergenic | 25.0% |
| !!! | AGAATTGTTTTTCTTGGTAT+AGG | - | chr1.1:34047542-34047561 | None:intergenic | 25.0% |
| !!! | ATCTAAGCTAAAGCATTTTA+GGG | + | chr1.1:34046148-34046167 | MS.gene073576:CDS | 25.0% |
| !!! | CTCCAATTTTGAAGTTAATA+TGG | + | chr1.1:34047921-34047940 | MS.gene073576:CDS | 25.0% |
| !!! | CTTGCTTTTAATCGTTTTAA+GGG | + | chr1.1:34046497-34046516 | MS.gene073576:CDS | 25.0% |
| !!! | GAATTGTTTTTCTTGGTATA+GGG | - | chr1.1:34047541-34047560 | None:intergenic | 25.0% |
| AAACTAAGAGATAGAAAAGC+CGG | + | chr1.1:34045876-34045895 | MS.gene073576:CDS | 30.0% | |
| AGAAATAAGTATCACACATG+AGG | + | chr1.1:34046349-34046368 | MS.gene073576:CDS | 30.0% | |
| AGACACATCTGATTCATTAT+CGG | - | chr1.1:34047020-34047039 | None:intergenic | 30.0% | |
| ATCCATCAAAGAAGGAAAAA+AGG | + | chr1.1:34046687-34046706 | MS.gene073576:CDS | 30.0% | |
| CATCGTCAACAAAAAATGAA+TGG | - | chr1.1:34046571-34046590 | None:intergenic | 30.0% | |
| CGGATATATTTGGTATTAAG+AGG | + | chr1.1:34047230-34047249 | MS.gene073576:CDS | 30.0% | |
| GCTAAGAAGTTCAACATATT+TGG | + | chr1.1:34047799-34047818 | MS.gene073576:CDS | 30.0% | |
| TAGTTCAGAAATAGTTCATC+AGG | + | chr1.1:34045923-34045942 | MS.gene073576:CDS | 30.0% | |
| TCAACAAAAAATGAATGGTC+CGG | - | chr1.1:34046566-34046585 | None:intergenic | 30.0% | |
| TTTCAGAAATTCTGTAGTTG+TGG | + | chr1.1:34047180-34047199 | MS.gene073576:CDS | 30.0% | |
| ! | ATTTTACGCACGGATATATT+TGG | + | chr1.1:34047220-34047239 | MS.gene073576:CDS | 30.0% |
| ! | CTGACTTTTAATCATGTCAT+AGG | - | chr1.1:34046303-34046322 | None:intergenic | 30.0% |
| ! | GATTTTAAACGATGACTTTG+TGG | - | chr1.1:34046891-34046910 | None:intergenic | 30.0% |
| ! | TATATAACCAGGAGGTTTTT+CGG | - | chr1.1:34047587-34047606 | None:intergenic | 30.0% |
| ! | TTGTTAAGGTTTGCTTCTAA+GGG | - | chr1.1:34047664-34047683 | None:intergenic | 30.0% |
| ! | TTTGTTAAGGTTTGCTTCTA+AGG | - | chr1.1:34047665-34047684 | None:intergenic | 30.0% |
| !! | AAGATATCTGCTGATTTCAT+TGG | + | chr1.1:34045586-34045605 | MS.gene073576:intron | 30.0% |
| !! | CATCTAAGCTAAAGCATTTT+AGG | + | chr1.1:34046147-34046166 | MS.gene073576:CDS | 30.0% |
| !! | GCTTGCTTTTAATCGTTTTA+AGG | + | chr1.1:34046496-34046515 | MS.gene073576:CDS | 30.0% |
| !! | GCTTTCAGAATTGTTTTTCT+TGG | - | chr1.1:34047548-34047567 | None:intergenic | 30.0% |
| !!! | ATCCTTTTTTCCTTCTTTGA+TGG | - | chr1.1:34046692-34046711 | None:intergenic | 30.0% |
| AAACTACAAGCATCACTATC+TGG | - | chr1.1:34045669-34045688 | None:intergenic | 35.0% | |
| AAATCGGTGATTGTATTCGT+CGG | + | chr1.1:34046906-34046925 | MS.gene073576:CDS | 35.0% | |
| AACAATCGGTGACTTCAATA+TGG | + | chr1.1:34045219-34045238 | MS.gene073576:CDS | 35.0% | |
| AAGATATGAGCGACACATAT+TGG | + | chr1.1:34047302-34047321 | MS.gene073576:CDS | 35.0% | |
| AAGCACAATTAATAGCACTC+TGG | - | chr1.1:34046220-34046239 | None:intergenic | 35.0% | |
| AATAAGTATCACACATGAGG+TGG | + | chr1.1:34046352-34046371 | MS.gene073576:CDS | 35.0% | |
| ACAGTTGTCGAAACAACAAT+CGG | + | chr1.1:34045205-34045224 | MS.gene073576:CDS | 35.0% | |
| ATAGGGCTTACGATTAACTT+GGG | - | chr1.1:34047524-34047543 | None:intergenic | 35.0% | |
| ATCATGTCATAGGTGTCTTT+AGG | - | chr1.1:34046293-34046312 | None:intergenic | 35.0% | |
| ATTCCTATGCTCTTCAATTG+TGG | - | chr1.1:34046183-34046202 | None:intergenic | 35.0% | |
| CAACAAAAAATGAATGGTCC+GGG | - | chr1.1:34046565-34046584 | None:intergenic | 35.0% | |
| CATGAGGAGATACAAATAGA+CGG | + | chr1.1:34045499-34045518 | MS.gene073576:CDS | 35.0% | |
| CTAGAACACTTCCTTATAGA+AGG | - | chr1.1:34046956-34046975 | None:intergenic | 35.0% | |
| GACACATCTGATTCATTATC+GGG | - | chr1.1:34047019-34047038 | None:intergenic | 35.0% | |
| GCAACTCCTGTAGTTAAAAA+AGG | + | chr1.1:34046620-34046639 | MS.gene073576:CDS | 35.0% | |
| GCATTGTCATCTATATAACC+AGG | - | chr1.1:34047598-34047617 | None:intergenic | 35.0% | |
| GTTGTAGAATTTGAAGAAGC+CGG | + | chr1.1:34045103-34045122 | MS.gene073576:CDS | 35.0% | |
| TAAGAAATGTGTAGATGCAG+AGG | + | chr1.1:34047762-34047781 | MS.gene073576:CDS | 35.0% | |
| TACAATCGGTGACTTTAGTA+TGG | + | chr1.1:34045288-34045307 | MS.gene073576:CDS | 35.0% | |
| TATAGGGCTTACGATTAACT+TGG | - | chr1.1:34047525-34047544 | None:intergenic | 35.0% | |
| TATTGAGACTGAGGAAAACT+TGG | + | chr1.1:34045713-34045732 | MS.gene073576:CDS | 35.0% | |
| TCAACAATCTGATGTACATG+AGG | + | chr1.1:34045483-34045502 | MS.gene073576:CDS | 35.0% | |
| TCTGTTTCAGATTCCTTAAG+TGG | - | chr1.1:34047706-34047725 | None:intergenic | 35.0% | |
| TTCTCTCTCAGATATGGTTT+GGG | + | chr1.1:34045986-34046005 | MS.gene073576:CDS | 35.0% | |
| TTGCCAGAAATACAACATTG+TGG | + | chr1.1:34046530-34046549 | MS.gene073576:CDS | 35.0% | |
| TTGTAGAATTTGAAGAAGCC+GGG | + | chr1.1:34045104-34045123 | MS.gene073576:CDS | 35.0% | |
| TTGTCATCTATATAACCAGG+AGG | - | chr1.1:34047595-34047614 | None:intergenic | 35.0% | |
| TTTCTCTCTCAGATATGGTT+TGG | + | chr1.1:34045985-34046004 | MS.gene073576:CDS | 35.0% | |
| ! | ACTTATTTCTTGTTGAACCC+CGG | - | chr1.1:34046339-34046358 | None:intergenic | 35.0% |
| ! | AGAAAAGTATACTCTCCAAG+GGG | - | chr1.1:34047130-34047149 | None:intergenic | 35.0% |
| ! | ATATAACCAGGAGGTTTTTC+GGG | - | chr1.1:34047586-34047605 | None:intergenic | 35.0% |
| ! | CAGAAAAGTATACTCTCCAA+GGG | - | chr1.1:34047131-34047150 | None:intergenic | 35.0% |
| ! | CTATTTCGTCGCATATTTTG+GGG | + | chr1.1:34046100-34046119 | MS.gene073576:CDS | 35.0% |
| ! | GAGTGCTATTAATTGTGCTT+TGG | + | chr1.1:34046220-34046239 | MS.gene073576:CDS | 35.0% |
| ! | TCAGAAAAGTATACTCTCCA+AGG | - | chr1.1:34047132-34047151 | None:intergenic | 35.0% |
| ! | TTGGAAAGAGATTTTACGCA+CGG | + | chr1.1:34047210-34047229 | MS.gene073576:CDS | 35.0% |
| ! | TTTTCTCCCATCTTGCATTT+CGG | - | chr1.1:34046840-34046859 | None:intergenic | 35.0% |
| !! | GCTATTTCGTCGCATATTTT+GGG | + | chr1.1:34046099-34046118 | MS.gene073576:CDS | 35.0% |
| !! | GGAGAGTATACTTTTCTGAA+TGG | + | chr1.1:34047133-34047152 | MS.gene073576:CDS | 35.0% |
| !! | TGAACTATTTCTGAACTACC+AGG | - | chr1.1:34045921-34045940 | None:intergenic | 35.0% |
| !!! | AGTGATGCTTGTAGTTTTGT+TGG | + | chr1.1:34045672-34045691 | MS.gene073576:intron | 35.0% |
| !!! | GTGGTTTCTGAAACATTTTC+TGG | - | chr1.1:34044950-34044969 | None:intergenic | 35.0% |
| !!! | GTTTTTTCCAGCTTAACTAG+TGG | + | chr1.1:34045610-34045629 | MS.gene073576:intron | 35.0% |
| !!! | TGCTATTTCGTCGCATATTT+TGG | + | chr1.1:34046098-34046117 | MS.gene073576:CDS | 35.0% |
| !!! | TTGCTGCCTTTTTTAACTAC+AGG | - | chr1.1:34046629-34046648 | None:intergenic | 35.0% |
| !!! | TTTTTCTGGTTTTTCCGTGA+TGG | - | chr1.1:34047421-34047440 | None:intergenic | 35.0% |
| AAAGTCAACGAGGAGTCAAA+TGG | + | chr1.1:34045813-34045832 | MS.gene073576:CDS | 40.0% | |
| AACACTATCCGAGTTTCCTA+CGG | + | chr1.1:34046430-34046449 | MS.gene073576:CDS | 40.0% | |
| AAGTTCATAACAAGCTCAGC+AGG | - | chr1.1:34047622-34047641 | None:intergenic | 40.0% | |
| AATCACACTGCAGAGGTTAA+AGG | + | chr1.1:34045559-34045578 | MS.gene073576:CDS | 40.0% | |
| AATCGGTGACTTCAATATGG+TGG | + | chr1.1:34045222-34045241 | MS.gene073576:CDS | 40.0% | |
| AATCGGTGACTTTAGTATGG+TGG | + | chr1.1:34045291-34045310 | MS.gene073576:CDS | 40.0% | |
| AATCGGTGATTGTATTCGTC+GGG | + | chr1.1:34046907-34046926 | MS.gene073576:CDS | 40.0% | |
| ACACTCAAGTTACTGACCAA+GGG | + | chr1.1:34045760-34045779 | MS.gene073576:CDS | 40.0% | |
| AGAGATCGAAAACCATTTCC+TGG | - | chr1.1:34047903-34047922 | None:intergenic | 40.0% | |
| AGGATGTCAGACCTAATGAA+TGG | + | chr1.1:34046707-34046726 | MS.gene073576:CDS | 40.0% | |
| ATCTTGCATTTCGGAGTCAT+CGG | - | chr1.1:34046831-34046850 | None:intergenic | 40.0% | |
| ATGACTCCGAAATGCAAGAT+GGG | + | chr1.1:34046831-34046850 | MS.gene073576:CDS | 40.0% | |
| CAAGTAACCACTAGTTAAGC+TGG | - | chr1.1:34045620-34045639 | None:intergenic | 40.0% | |
| CACCTGAACATTCCAAGAAA+AGG | + | chr1.1:34046780-34046799 | MS.gene073576:CDS | 40.0% | |
| CACTTGGAGTGTAATTAAGC+TGG | - | chr1.1:34047843-34047862 | None:intergenic | 40.0% | |
| CCAGAAATACAACATTGTGG+AGG | + | chr1.1:34046533-34046552 | MS.gene073576:CDS | 40.0% | |
| CCTCCACAATGTTGTATTTC+TGG | - | chr1.1:34046536-34046555 | None:intergenic | 40.0% | |
| CTGCCAAAAGCAAAAGAAGA+AGG | + | chr1.1:34045957-34045976 | MS.gene073576:CDS | 40.0% | |
| GGATGTCAGACCTAATGAAT+GGG | + | chr1.1:34046708-34046727 | MS.gene073576:CDS | 40.0% | |
| GGTCATAATGAAGTGGTTTG+TGG | + | chr1.1:34045028-34045047 | MS.gene073576:CDS | 40.0% | |
| TAAGGGAACAGAATTGAGCT+CGG | - | chr1.1:34047647-34047666 | None:intergenic | 40.0% | |
| TCAGGTGAAACCAGATTATC+TGG | - | chr1.1:34046767-34046786 | None:intergenic | 40.0% | |
| TCTCAAGACGAGTCGAATAT+GGG | + | chr1.1:34046249-34046268 | MS.gene073576:CDS | 40.0% | |
| TCTCTCTCAGATATGGTTTG+GGG | + | chr1.1:34045987-34046006 | MS.gene073576:CDS | 40.0% | |
| TGGAAAGGAAAAAGTCAACG+AGG | + | chr1.1:34045803-34045822 | MS.gene073576:CDS | 40.0% | |
| TTGGGGACAAAACATTTGCA+TGG | + | chr1.1:34046117-34046136 | MS.gene073576:CDS | 40.0% | |
| ! | AATCTGGAGTCCCATTCATT+AGG | - | chr1.1:34046721-34046740 | None:intergenic | 40.0% |
| ! | AGCAATGATGATGCTTTAGC+AGG | + | chr1.1:34045352-34045371 | MS.gene073576:CDS | 40.0% |
| ! | CCTTGAAAAGTGCAACTCAA+AGG | + | chr1.1:34045411-34045430 | MS.gene073576:CDS | 40.0% |
| ! | CGAGTTTTCTCTCTCAGATA+TGG | + | chr1.1:34045980-34045999 | MS.gene073576:CDS | 40.0% |
| ! | CTCCTTTTCTTGGAATGTTC+AGG | - | chr1.1:34046785-34046804 | None:intergenic | 40.0% |
| ! | CTTTAGCAGGTAGTTCTGTA+GGG | + | chr1.1:34045365-34045384 | MS.gene073576:CDS | 40.0% |
| ! | TCGCCTTCTTCTTTTGCTTT+TGG | - | chr1.1:34045963-34045982 | None:intergenic | 40.0% |
| ! | TCTCCACAATTGAAGAGCAT+AGG | + | chr1.1:34046177-34046196 | MS.gene073576:CDS | 40.0% |
| ! | TGGTTTGTGGTGATTCTGTT+GGG | + | chr1.1:34045041-34045060 | MS.gene073576:CDS | 40.0% |
| ! | TTTAGCAGGTAGTTCTGTAG+GGG | + | chr1.1:34045366-34045385 | MS.gene073576:CDS | 40.0% |
| ! | TTTTCCTTTCCATCACGCAA+CGG | - | chr1.1:34045795-34045814 | None:intergenic | 40.0% |
| !! | AAGTTGATAGAGTAAGCAGC+CGG | + | chr1.1:34047725-34047744 | MS.gene073576:CDS | 40.0% |
| !! | GAGTTGGGTAACGTTGTTTT+GGG | + | chr1.1:34045148-34045167 | MS.gene073576:CDS | 40.0% |
| !! | TAAGCGTTTTGGACCACTTA+AGG | + | chr1.1:34047690-34047709 | MS.gene073576:CDS | 40.0% |
| !! | TGAGTTGGGTAACGTTGTTT+TGG | + | chr1.1:34045147-34045166 | MS.gene073576:CDS | 40.0% |
| !!! | CCTTTGAGTTGCACTTTTCA+AGG | - | chr1.1:34045414-34045433 | None:intergenic | 40.0% |
| !!! | CTGGTTGTTCGTCTTTTTTC+TGG | - | chr1.1:34047435-34047454 | None:intergenic | 40.0% |
| AAACCCCCAATAGTTGGAAC+TGG | + | chr1.1:34047256-34047275 | MS.gene073576:CDS | 45.0% | |
| AACCAGTGCAACAACCATCA+CGG | + | chr1.1:34047404-34047423 | MS.gene073576:CDS | 45.0% | |
| AACCCCCAATAGTTGGAACT+GGG | + | chr1.1:34047257-34047276 | MS.gene073576:CDS | 45.0% | |
| AACCTCTGCAGTGTGATTCA+CGG | - | chr1.1:34045557-34045576 | None:intergenic | 45.0% | |
| ACAACCCTAGATTCCTCAAC+CGG | - | chr1.1:34045088-34045107 | None:intergenic | 45.0% | |
| ACAGGGGTCGAAACTACAAT+CGG | + | chr1.1:34045274-34045293 | MS.gene073576:CDS | 45.0% | |
| ACATACCACAGACCCATCTA+GGG | - | chr1.1:34045005-34045024 | None:intergenic | 45.0% | |
| ACCACCAACTTTCACACCAT+GGG | - | chr1.1:34044978-34044997 | None:intergenic | 45.0% | |
| ACTGACAGGGTCATTGACAA+TGG | + | chr1.1:34047325-34047344 | MS.gene073576:CDS | 45.0% | |
| AGATTCCTCAACCGGATACT+CGG | - | chr1.1:34045080-34045099 | None:intergenic | 45.0% | |
| AGGAAGAAACCCCCAATAGT+TGG | + | chr1.1:34047250-34047269 | MS.gene073576:CDS | 45.0% | |
| AGTATCCGGTTGAGGAATCT+AGG | + | chr1.1:34045080-34045099 | MS.gene073576:CDS | 45.0% | |
| AGTCAGACAGTAGAGAACAC+CGG | + | chr1.1:34046317-34046336 | MS.gene073576:CDS | 45.0% | |
| ATAGCTGACAACGATGTGAG+CGG | + | chr1.1:34045442-34045461 | MS.gene073576:CDS | 45.0% | |
| ATGTGGGGGTCATAATGAAG+TGG | + | chr1.1:34045021-34045040 | MS.gene073576:CDS | 45.0% | |
| ATTCTGTTGGGGTAGTTGGT+GGG | + | chr1.1:34045053-34045072 | MS.gene073576:CDS | 45.0% | |
| CACTGTGCATCCATCAAAGA+AGG | + | chr1.1:34046679-34046698 | MS.gene073576:CDS | 45.0% | |
| CCTGATCATCCTCATCAGTT+GGG | - | chr1.1:34047045-34047064 | None:intergenic | 45.0% | |
| CGACACATATTGGACTGACA+GGG | + | chr1.1:34047312-34047331 | MS.gene073576:CDS | 45.0% | |
| GACACTCAAGTTACTGACCA+AGG | + | chr1.1:34045759-34045778 | MS.gene073576:CDS | 45.0% | |
| GATGACTCCGAAATGCAAGA+TGG | + | chr1.1:34046830-34046849 | MS.gene073576:CDS | 45.0% | |
| GCTATCTTCACTTCAGCTTG+TGG | + | chr1.1:34047096-34047115 | MS.gene073576:CDS | 45.0% | |
| GGTTTGTGGTGATTCTGTTG+GGG | + | chr1.1:34045042-34045061 | MS.gene073576:CDS | 45.0% | |
| GTATCCGGTTGAGGAATCTA+GGG | + | chr1.1:34045081-34045100 | MS.gene073576:CDS | 45.0% | |
| GTCTCAAGACGAGTCGAATA+TGG | + | chr1.1:34046248-34046267 | MS.gene073576:CDS | 45.0% | |
| GTGACCCAGTTCCAACTATT+GGG | - | chr1.1:34047264-34047283 | None:intergenic | 45.0% | |
| GTGAGAGATGAAGCAGTAGT+TGG | + | chr1.1:34045178-34045197 | MS.gene073576:CDS | 45.0% | |
| TAGATGGGTCTGTGGTATGT+GGG | + | chr1.1:34045005-34045024 | MS.gene073576:CDS | 45.0% | |
| TATCTTGTGATCTGCGACCT+CGG | - | chr1.1:34045323-34045342 | None:intergenic | 45.0% | |
| TCAAAGTCTCCATCTGCCTT+TGG | - | chr1.1:34046989-34047008 | None:intergenic | 45.0% | |
| TCACTGCGTCACCTTCTATA+AGG | + | chr1.1:34046942-34046961 | MS.gene073576:CDS | 45.0% | |
| TCCTGATCATCCTCATCAGT+TGG | - | chr1.1:34047046-34047065 | None:intergenic | 45.0% | |
| TCTTAAAGACCACTCTTGCC+CGG | - | chr1.1:34047747-34047766 | None:intergenic | 45.0% | |
| TGACCCAGTTCCAACTATTG+GGG | - | chr1.1:34047263-34047282 | None:intergenic | 45.0% | |
| TGCAACACAAGACCAGGAAA+TGG | + | chr1.1:34047888-34047907 | MS.gene073576:CDS | 45.0% | |
| TGTTGATGCAACACAAGACC+AGG | + | chr1.1:34047882-34047901 | MS.gene073576:CDS | 45.0% | |
| TTCTAGTGACCGATCTCCAA+AGG | + | chr1.1:34046970-34046989 | MS.gene073576:CDS | 45.0% | |
| ! | CTTCACAAGCGCATGTTTTC+CGG | - | chr1.1:34045898-34045917 | None:intergenic | 45.0% |
| ! | GCTTTAGCAGGTAGTTCTGT+AGG | + | chr1.1:34045364-34045383 | MS.gene073576:CDS | 45.0% |
| ! | GTGGTTTGTGGTGATTCTGT+TGG | + | chr1.1:34045040-34045059 | MS.gene073576:CDS | 45.0% |
| ! | TTTGGAGCTTGTGACTGCTA+AGG | + | chr1.1:34046466-34046485 | MS.gene073576:CDS | 45.0% |
| ! | TTTGGTGACTTAGCAGAGAC+TGG | - | chr1.1:34047454-34047473 | None:intergenic | 45.0% |
| ! | TTTTGTTGGTGCAGGTTCGT+CGG | + | chr1.1:34045686-34045705 | MS.gene073576:intron | 45.0% |
| !! | AGTTGATAGAGTAAGCAGCC+GGG | + | chr1.1:34047726-34047745 | MS.gene073576:CDS | 45.0% |
| !! | ATTCTCCTGATGGTGATGGT+CGG | + | chr1.1:34046738-34046757 | MS.gene073576:CDS | 45.0% |
| !! | GAAGCTTTGAACAGTGCACT+TGG | - | chr1.1:34047859-34047878 | None:intergenic | 45.0% |
| !! | TTGGTGGTGAAACCCTAGAT+GGG | + | chr1.1:34044990-34045009 | MS.gene073576:CDS | 45.0% |
| !!! | GCTTGTAGTTTTGTTGGTGC+AGG | + | chr1.1:34045678-34045697 | MS.gene073576:intron | 45.0% |
| !!! | TGCACTGGTTTTTGTTGCAC+TGG | - | chr1.1:34047394-34047413 | None:intergenic | 45.0% |
| !!! | TGGGTAACGTTGTTTTGGGA+GGG | + | chr1.1:34045152-34045171 | MS.gene073576:CDS | 45.0% |
| !!! | TTGGGTAACGTTGTTTTGGG+AGG | + | chr1.1:34045151-34045170 | MS.gene073576:CDS | 45.0% |
| AAACATGCGCTTGTGAAGCC+TGG | + | chr1.1:34045900-34045919 | MS.gene073576:CDS | 50.0% | |
| AAACGATCAAAGCCAGCCGT+AGG | - | chr1.1:34046449-34046468 | None:intergenic | 50.0% | |
| AAAGCCAGCCGTAGGAAACT+CGG | - | chr1.1:34046441-34046460 | None:intergenic | 50.0% | |
| AACCGTGAATCACACTGCAG+AGG | + | chr1.1:34045552-34045571 | MS.gene073576:CDS | 50.0% | |
| AAGTGAGAAGTCACCCATGG+TGG | + | chr1.1:34046012-34046031 | MS.gene073576:CDS | 50.0% | |
| ACCCATGGTGTGAAAGTTGG+TGG | + | chr1.1:34044974-34044993 | MS.gene073576:CDS | 50.0% | |
| AGATGGGTCTGTGGTATGTG+GGG | + | chr1.1:34045006-34045025 | MS.gene073576:CDS | 50.0% | |
| ATAGACGGCGACGATCAACA+AGG | + | chr1.1:34045514-34045533 | MS.gene073576:CDS | 50.0% | |
| ATCCGTCAGATGCATCTGAG+AGG | + | chr1.1:34046051-34046070 | MS.gene073576:CDS | 50.0% | |
| ATTTCGGAGTCATCGGCGTA+GGG | - | chr1.1:34046824-34046843 | None:intergenic | 50.0% | |
| CACATACCACAGACCCATCT+AGG | - | chr1.1:34045006-34045025 | None:intergenic | 50.0% | |
| CACCACCAACTTTCACACCA+TGG | - | chr1.1:34044979-34044998 | None:intergenic | 50.0% | |
| CCATCACCATCAGGAGAATC+TGG | - | chr1.1:34046737-34046756 | None:intergenic | 50.0% | |
| CCCAACTGATGAGGATGATC+AGG | + | chr1.1:34047042-34047061 | MS.gene073576:CDS | 50.0% | |
| CCCTGTACTACCAACTACTG+CGG | - | chr1.1:34045260-34045279 | None:intergenic | 50.0% | |
| CTAGATGGGTCTGTGGTATG+TGG | + | chr1.1:34045004-34045023 | MS.gene073576:CDS | 50.0% | |
| CTGTAGTTGTGGCTGCTGAT+TGG | + | chr1.1:34047191-34047210 | MS.gene073576:CDS | 50.0% | |
| GACCCAGTTCCAACTATTGG+GGG | - | chr1.1:34047262-34047281 | None:intergenic | 50.0% | |
| GACGGATCAAATATCTGCCC+AGG | - | chr1.1:34046038-34046057 | None:intergenic | 50.0% | |
| GATTCTGTTGGGGTAGTTGG+TGG | + | chr1.1:34045052-34045071 | MS.gene073576:CDS | 50.0% | |
| GCAAAGTGAGAAGTCACCCA+TGG | + | chr1.1:34046009-34046028 | MS.gene073576:CDS | 50.0% | |
| GCGACACATATTGGACTGAC+AGG | + | chr1.1:34047311-34047330 | MS.gene073576:CDS | 50.0% | |
| GGTGACCCAGTTCCAACTAT+TGG | - | chr1.1:34047265-34047284 | None:intergenic | 50.0% | |
| GGTGATTCTGTTGGGGTAGT+TGG | + | chr1.1:34045049-34045068 | MS.gene073576:CDS | 50.0% | |
| GTCAACGAGGAGTCAAATGG+TGG | + | chr1.1:34045816-34045835 | MS.gene073576:CDS | 50.0% | |
| GTCAGACAGTAGAGAACACC+GGG | + | chr1.1:34046318-34046337 | MS.gene073576:CDS | 50.0% | |
| GTGACCCATGGTGTGAAAGT+TGG | + | chr1.1:34044971-34044990 | MS.gene073576:CDS | 50.0% | |
| TAGACGGCGACGATCAACAA+GGG | + | chr1.1:34045515-34045534 | MS.gene073576:CDS | 50.0% | |
| TCAGAAACCACTGTGACCCA+TGG | + | chr1.1:34044959-34044978 | MS.gene073576:CDS | 50.0% | |
| TCAGACAGTAGAGAACACCG+GGG | + | chr1.1:34046319-34046338 | MS.gene073576:CDS | 50.0% | |
| TCCGTCAGATGCATCTGAGA+GGG | + | chr1.1:34046052-34046071 | MS.gene073576:CDS | 50.0% | |
| TGAAACCCTAGATGGGTCTG+TGG | + | chr1.1:34044997-34045016 | MS.gene073576:CDS | 50.0% | |
| TGGTCGGACTCCAGATAATC+TGG | + | chr1.1:34046754-34046773 | MS.gene073576:CDS | 50.0% | |
| TGTGTCTCTCCCAACTGATG+AGG | + | chr1.1:34047033-34047052 | MS.gene073576:CDS | 50.0% | |
| TTCCGTGATGGTTGTTGCAC+TGG | - | chr1.1:34047409-34047428 | None:intergenic | 50.0% | |
| TTTCACACCATGGGTCACAG+TGG | - | chr1.1:34044969-34044988 | None:intergenic | 50.0% | |
| ! | AGCGCTCTTGCTCCTTTTCT+TGG | - | chr1.1:34046795-34046814 | None:intergenic | 50.0% |
| ! | CCAGATTCTCCTGATGGTGA+TGG | + | chr1.1:34046734-34046753 | MS.gene073576:CDS | 50.0% |
| ! | CTCCATCTGCCTTTGGAGAT+CGG | - | chr1.1:34046982-34047001 | None:intergenic | 50.0% |
| ! | GGCTTACGATTAACTTGGGC+TGG | - | chr1.1:34047520-34047539 | None:intergenic | 50.0% |
| ! | GGCTTTGGTGACTTAACAGC+TGG | - | chr1.1:34047478-34047497 | None:intergenic | 50.0% |
| ! | GGTGACTTAACAGCTGGCTT+TGG | - | chr1.1:34047472-34047491 | None:intergenic | 50.0% |
| ! | GTCGGTGTCTATTGAGACTG+AGG | + | chr1.1:34045704-34045723 | MS.gene073576:CDS | 50.0% |
| ! | TGTGAGCGGTGTTTCTGCTT+TGG | + | chr1.1:34045456-34045475 | MS.gene073576:CDS | 50.0% |
| ! | TTCTGAAAGCAATCCTGCCG+AGG | + | chr1.1:34047558-34047577 | MS.gene073576:CDS | 50.0% |
| !! | ACATTGTGGAGGTGTTGACC+CGG | + | chr1.1:34046544-34046563 | MS.gene073576:CDS | 50.0% |
| !! | CCGCAGTAGTTGGTAGTACA+GGG | + | chr1.1:34045257-34045276 | MS.gene073576:CDS | 50.0% |
| !! | CGATTAACTTGGGCTGGCTT+TGG | - | chr1.1:34047514-34047533 | None:intergenic | 50.0% |
| !! | CGCAGTAGTTGGTAGTACAG+GGG | + | chr1.1:34045258-34045277 | MS.gene073576:CDS | 50.0% |
| !! | GTTGGTGGTGAAACCCTAGA+TGG | + | chr1.1:34044989-34045008 | MS.gene073576:CDS | 50.0% |
| !! | TACGGCTGGCTTTGATCGTT+TGG | + | chr1.1:34046448-34046467 | MS.gene073576:CDS | 50.0% |
| !! | TGCACTGGTTTCTGTTGCAC+TGG | - | chr1.1:34047379-34047398 | None:intergenic | 50.0% |
| !!! | GGGTAACGTTGTTTTGGGAG+GGG | + | chr1.1:34045153-34045172 | MS.gene073576:CDS | 50.0% |
| AATATCTGCCCAGGCCACCA+TGG | - | chr1.1:34046029-34046048 | None:intergenic | 55.0% | |
| AATGCGGCGGCAGTTGAGTT+GGG | + | chr1.1:34045133-34045152 | MS.gene073576:CDS | 55.0% | |
| ACTACCAACTACTGCGGCCT+CGG | - | chr1.1:34045254-34045273 | None:intergenic | 55.0% | |
| AGAAGCCGGGAGTGAGAATG+CGG | + | chr1.1:34045117-34045136 | MS.gene073576:CDS | 55.0% | |
| ATATCTGCCCAGGCCACCAT+GGG | - | chr1.1:34046028-34046047 | None:intergenic | 55.0% | |
| CATTTCGGAGTCATCGGCGT+AGG | - | chr1.1:34046825-34046844 | None:intergenic | 55.0% | |
| CGAGGAGTCAAATGGTGGTC+AGG | + | chr1.1:34045821-34045840 | MS.gene073576:CDS | 55.0% | |
| CTATCCGAGTTTCCTACGGC+TGG | + | chr1.1:34046434-34046453 | MS.gene073576:CDS | 55.0% | |
| CTTGTGGCACAAGAACCCCT+TGG | + | chr1.1:34047112-34047131 | MS.gene073576:CDS | 55.0% | |
| GACCGATCTCCAAAGGCAGA+TGG | + | chr1.1:34046977-34046996 | MS.gene073576:CDS | 55.0% | |
| GATGGGTCTGTGGTATGTGG+GGG | + | chr1.1:34045007-34045026 | MS.gene073576:CDS | 55.0% | |
| GCCCTCTCAGATGCATCTGA+CGG | - | chr1.1:34046056-34046075 | None:intergenic | 55.0% | |
| GGGACTCCAGATTCTCCTGA+TGG | + | chr1.1:34046728-34046747 | MS.gene073576:CDS | 55.0% | |
| TTCCATCACGCAACGGCGAA+TGG | - | chr1.1:34045788-34045807 | None:intergenic | 55.0% | |
| ! | GGCTTTGGTGACTTGGAAGC+TGG | - | chr1.1:34047499-34047518 | None:intergenic | 55.0% |
| ! | GGTGACTTGGAAGCTGGCTT+TGG | - | chr1.1:34047493-34047512 | None:intergenic | 55.0% |
| ! | TTCGCCGTTGCGTGATGGAA+AGG | + | chr1.1:34045788-34045807 | MS.gene073576:CDS | 55.0% |
| !! | AGTTGGTGGGACCGAGTATC+CGG | + | chr1.1:34045066-34045085 | MS.gene073576:CDS | 55.0% |
| !! | CAATATGGTGGATGCTGCCG+AGG | + | chr1.1:34045234-34045253 | MS.gene073576:CDS | 55.0% |
| !! | GCCGCAGTAGTTGGTAGTAC+AGG | + | chr1.1:34045256-34045275 | MS.gene073576:CDS | 55.0% |
| !! | TAGTATGGTGGATGCTGCCG+AGG | + | chr1.1:34045303-34045322 | MS.gene073576:CDS | 55.0% |
| !! | TGCACTGGTTTCTGTTGCGC+TGG | - | chr1.1:34047364-34047383 | None:intergenic | 55.0% |
| !! | TTGGGCTGGCTTTGGTGACT+TGG | - | chr1.1:34047506-34047525 | None:intergenic | 55.0% |
| !!! | AGGAGGTTTTTCGGGAGCCT+CGG | - | chr1.1:34047578-34047597 | None:intergenic | 55.0% |
| AGAAGTCACCCATGGTGGCC+TGG | + | chr1.1:34046017-34046036 | MS.gene073576:CDS | 60.0% | |
| AGCCATTCGCCGTTGCGTGA+TGG | + | chr1.1:34045783-34045802 | MS.gene073576:CDS | 60.0% | |
| AGTAAGCAGCCGGGCAAGAG+TGG | + | chr1.1:34047735-34047754 | MS.gene073576:CDS | 60.0% | |
| GAAGTCACCCATGGTGGCCT+GGG | + | chr1.1:34046018-34046037 | MS.gene073576:CDS | 60.0% | |
| GAATGCGGCGGCAGTTGAGT+TGG | + | chr1.1:34045132-34045151 | MS.gene073576:CDS | 60.0% | |
| GAGGCTCCCGAAAAACCTCC+TGG | + | chr1.1:34047577-34047596 | MS.gene073576:CDS | 60.0% | |
| GGAGTCCGACCATCACCATC+AGG | - | chr1.1:34046746-34046765 | None:intergenic | 60.0% | |
| TGGGACCGAGTATCCGGTTG+AGG | + | chr1.1:34045072-34045091 | MS.gene073576:CDS | 60.0% | |
| AGCCGGGAGTGAGAATGCGG+CGG | + | chr1.1:34045120-34045139 | MS.gene073576:CDS | 65.0% | |
| GCAACGGCGAATGGCTCCCT+TGG | - | chr1.1:34045779-34045798 | None:intergenic | 65.0% | |
| TGCCGCCGCATTCTCACTCC+CGG | - | chr1.1:34045125-34045144 | None:intergenic | 65.0% | |
| !!! | GGTTTTTCGGGAGCCTCGGC+AGG | - | chr1.1:34047574-34047593 | None:intergenic | 65.0% |
| GCTGCCGAGGCCGCAGTAGT+TGG | + | chr1.1:34045247-34045266 | MS.gene073576:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 34044938 | 34047948 | 34044938 | ID=MS.gene073576 |
| chr1.1 | mRNA | 34044938 | 34047948 | 34044938 | ID=MS.gene073576.t1;Parent=MS.gene073576 |
| chr1.1 | exon | 34044938 | 34045580 | 34044938 | ID=MS.gene073576.t1.exon1;Parent=MS.gene073576.t1 |
| chr1.1 | CDS | 34044938 | 34045580 | 34044938 | ID=cds.MS.gene073576.t1;Parent=MS.gene073576.t1 |
| chr1.1 | exon | 34045700 | 34047948 | 34045700 | ID=MS.gene073576.t1.exon2;Parent=MS.gene073576.t1 |
| chr1.1 | CDS | 34045700 | 34047948 | 34045700 | ID=cds.MS.gene073576.t1;Parent=MS.gene073576.t1 |
| Gene Sequence |
| Protein sequence |
