Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073797.t1 | XP_013468260.1 | 96.7 | 361 | 11 | 1 | 1 | 360 | 1 | 361 | 1.00E-147 | 533.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073797.t1 | Q0JHZ2 | 80.3 | 361 | 67 | 2 | 1 | 357 | 1 | 361 | 5.1e-116 | 419.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073797.t1 | A0A072VKH3 | 96.7 | 361 | 11 | 1 | 1 | 360 | 1 | 361 | 7.2e-148 | 533.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene073797.t1 | TF | C3H |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene31037 | MS.gene073797 | PPI |
| MS.gene073797 | MS.gene049359 | PPI |
| MS.gene073797 | MS.gene06479 | PPI |
| MS.gene073797 | MS.gene013382 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073797.t1 | MTR_1g067020 | 99.446 | 361 | 1 | 1 | 1 | 360 | 1 | 361 | 0.0 | 731 |
| MS.gene073797.t1 | MTR_6g078970 | 49.167 | 120 | 19 | 3 | 184 | 303 | 5 | 82 | 6.78e-23 | 92.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073797.t1 | AT2G20280 | 72.776 | 371 | 88 | 6 | 1 | 360 | 1 | 369 | 5.52e-160 | 453 |
Find 76 sgRNAs with CRISPR-Local
Find 283 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCTCCTGGCTCCTTAATT+TGG | 0.131430 | 1.3:+46981111 | None:intergenic |
| TTCAACAACCTTCTGCTTCT+TGG | 0.227516 | 1.3:+46985523 | None:intergenic |
| ATCTTGTTTGGGATCGGTTC+TGG | 0.237299 | 1.3:+46985418 | None:intergenic |
| TAATACCTTTGCATCTTGTT+TGG | 0.261505 | 1.3:+46985406 | None:intergenic |
| TGCCTGTTGGGCAGCCAAAC+TGG | 0.270781 | 1.3:+46983553 | None:intergenic |
| CTTAATTTGGATTGATGTCT+TGG | 0.282985 | 1.3:+46981124 | None:intergenic |
| GCCACCTGTTGCTGAGGTGC+TGG | 0.286551 | 1.3:+46981232 | None:intergenic |
| CAAGACATCAATCCAAATTA+AGG | 0.287429 | 1.3:-46981123 | MS.gene073797:CDS |
| CATTAGGTTCTGGTTCTCTT+TGG | 0.299666 | 1.3:+46983232 | None:intergenic |
| GGAAGCAATATGGTTGGTTT+TGG | 0.321181 | 1.3:-46983877 | MS.gene073797:CDS |
| CCAAATGAAGGCTTTGTTAG+AGG | 0.323021 | 1.3:-46983786 | MS.gene073797:CDS |
| CCTCTAACAAAGCCTTCATT+TGG | 0.329335 | 1.3:+46983786 | None:intergenic |
| AATACCTTTGCATCTTGTTT+GGG | 0.345954 | 1.3:+46985407 | None:intergenic |
| TGTTCAGTTTCATTAGGTTC+TGG | 0.346108 | 1.3:+46983222 | None:intergenic |
| ACATTCTGTTCAGTTTCATT+AGG | 0.355174 | 1.3:+46983216 | None:intergenic |
| TAAAACAACTCAGTAGTTAT+AGG | 0.363557 | 1.3:+46983611 | None:intergenic |
| ATACAATTCTTACCACCATT+TGG | 0.368919 | 1.3:+46983848 | None:intergenic |
| TGCCAGTTTGGCTGCCCAAC+AGG | 0.370933 | 1.3:-46983555 | MS.gene073797:CDS |
| CTTAGCCCTCTCTGCCTGTT+GGG | 0.378571 | 1.3:+46983541 | None:intergenic |
| TGATTACCAGGTGGGACTTT+AGG | 0.387712 | 1.3:+46984718 | None:intergenic |
| ACTGGGAGTGCTGCTAATAA+TGG | 0.388945 | 1.3:-46981257 | MS.gene073797:CDS |
| TGTATTCATCTTCAGGGGAC+TGG | 0.391678 | 1.3:-46981275 | MS.gene073797:intron |
| GTCCAATGCTAGCTTGTTTG+TGG | 0.394012 | 1.3:-46983280 | MS.gene073797:CDS |
| TGACGACGACGATGATGAAT+TGG | 0.394183 | 1.3:-46981183 | MS.gene073797:CDS |
| GTATTCATCTTCAGGGGACT+GGG | 0.399295 | 1.3:-46981274 | MS.gene073797:intron |
| CAGGATTAAGCTTCAGCTCC+TGG | 0.399587 | 1.3:+46981098 | None:intergenic |
| TCTTGTTTGGGATCGGTTCT+GGG | 0.408315 | 1.3:+46985419 | None:intergenic |
| CTCTAACAAAGCCTTCATTT+GGG | 0.418201 | 1.3:+46983787 | None:intergenic |
| TCTTAGCCCTCTCTGCCTGT+TGG | 0.422157 | 1.3:+46983540 | None:intergenic |
| GGACGAGAGAGATGCCAGTT+TGG | 0.425678 | 1.3:-46983567 | MS.gene073797:CDS |
| GTTGTTGAAGACAAAACTTT+CGG | 0.429860 | 1.3:-46985509 | MS.gene073797:CDS |
| ATTTGAATGTTCAGAGGAAA+GGG | 0.439404 | 1.3:-46984336 | MS.gene073797:CDS |
| CCACCTGTTGCTGAGGTGCT+GGG | 0.445150 | 1.3:+46981233 | None:intergenic |
| GGTCCCAGCACCTCAGCAAC+AGG | 0.448016 | 1.3:-46981236 | MS.gene073797:CDS |
| CTTTGCATCTTGTTTGGGAT+CGG | 0.453264 | 1.3:+46985412 | None:intergenic |
| ATCGTCGTCGTCAATGTCAT+CGG | 0.466901 | 1.3:+46981193 | None:intergenic |
| CGACGATGATGAATTGGACT+TGG | 0.483319 | 1.3:-46981177 | MS.gene073797:CDS |
| GGGATCGGTTCTGGGTTGAA+CGG | 0.484565 | 1.3:+46985427 | None:intergenic |
| CTTGGACGAGTTGAATGAAC+TGG | 0.496577 | 1.3:-46981159 | MS.gene073797:CDS |
| TAAAGTGGGTCAGTGTGCTA+AGG | 0.499067 | 1.3:-46984383 | MS.gene073797:CDS |
| AAACTCACATAATACGGACT+TGG | 0.510404 | 1.3:+46984408 | None:intergenic |
| GGGCTAAGAATGACCGTATG+AGG | 0.510546 | 1.3:-46983526 | MS.gene073797:intron |
| GCGGTAGAGAGGAAGCAATA+TGG | 0.516289 | 1.3:-46983887 | MS.gene073797:CDS |
| AACTCACATAATACGGACTT+GGG | 0.517197 | 1.3:+46984409 | None:intergenic |
| AAAGTGGGTCAGTGTGCTAA+GGG | 0.517849 | 1.3:-46984382 | MS.gene073797:CDS |
| TGTTCTAAAATCCCAAATGA+AGG | 0.519608 | 1.3:-46983798 | MS.gene073797:CDS |
| ATAAATCATACAATATCTGT+TGG | 0.520423 | 1.3:+46984113 | None:intergenic |
| TCGTCGTCGTCAATGTCATC+GGG | 0.524494 | 1.3:+46981194 | None:intergenic |
| GGCTGCCCAACAGGCAGAGA+GGG | 0.524561 | 1.3:-46983546 | MS.gene073797:CDS |
| GATTTGAATGTTCAGAGGAA+AGG | 0.525852 | 1.3:-46984337 | MS.gene073797:CDS |
| TCAAGAGACATTGGAGAAAG+TGG | 0.526557 | 1.3:-46984171 | MS.gene073797:CDS |
| CTCATGATTTGAATGTTCAG+AGG | 0.535502 | 1.3:-46984342 | MS.gene073797:CDS |
| TCAATCCAAATTAAGGAGCC+AGG | 0.536632 | 1.3:-46981116 | MS.gene073797:CDS |
| GATAATGAACATACCTCATA+CGG | 0.540126 | 1.3:+46983513 | None:intergenic |
| GTCAGATACAATGGAAGAGT+GGG | 0.540786 | 1.3:-46984195 | MS.gene073797:intron |
| TATAGACATGCACTTCCACC+TGG | 0.544388 | 1.3:-46983824 | MS.gene073797:CDS |
| TGAGGAGGAGATCGAAAAGC+AGG | 0.549446 | 1.3:-46983741 | MS.gene073797:intron |
| ATCCACAAACAAGCTAGCAT+TGG | 0.551369 | 1.3:+46983278 | None:intergenic |
| GGAAGAGAAGGCAAAAGAGA+AGG | 0.553385 | 1.3:-46984776 | MS.gene073797:CDS |
| ATCTGATAAAATGCCAATTG+AGG | 0.553676 | 1.3:-46983759 | MS.gene073797:CDS |
| GTCTGCGCCACCTGTTGCTG+AGG | 0.561741 | 1.3:+46981226 | None:intergenic |
| AGAGTGGGATCAAGAGACAT+TGG | 0.578286 | 1.3:-46984180 | MS.gene073797:CDS |
| ATCGGTTCTGGGTTGAACGG+AGG | 0.580401 | 1.3:+46985430 | None:intergenic |
| TGTCAGATACAATGGAAGAG+TGG | 0.594832 | 1.3:-46984196 | MS.gene073797:intron |
| TCTTATGTTGTCAGATACAA+TGG | 0.596224 | 1.3:-46984204 | MS.gene073797:intron |
| TAGAGAGGAAGCAATATGGT+TGG | 0.597838 | 1.3:-46983883 | MS.gene073797:CDS |
| CCCAGCACCTCAGCAACAGG+TGG | 0.602114 | 1.3:-46981233 | MS.gene073797:CDS |
| CGATCCCAAACAAGATGCAA+AGG | 0.603297 | 1.3:-46985411 | MS.gene073797:intron |
| TGATAAAATGCCAATTGAGG+AGG | 0.604474 | 1.3:-46983756 | MS.gene073797:CDS |
| AATGAAAATGATTACCAGGT+GGG | 0.607119 | 1.3:+46984710 | None:intergenic |
| TTTGAATGTTCAGAGGAAAG+GGG | 0.609926 | 1.3:-46984335 | MS.gene073797:CDS |
| TGATGTAGCCAAGAAGCAGA+AGG | 0.627538 | 1.3:-46985531 | MS.gene073797:CDS |
| AGAGACATTGGAGAAAGTGG+TGG | 0.637831 | 1.3:-46984168 | MS.gene073797:CDS |
| TACAGTGATAAGCGTGACGA+TGG | 0.639061 | 1.3:-46984298 | MS.gene073797:intron |
| TGGCTGCCCAACAGGCAGAG+AGG | 0.639365 | 1.3:-46983547 | MS.gene073797:CDS |
| AGTCAGCCTAAAGTCCCACC+TGG | 0.657066 | 1.3:-46984724 | MS.gene073797:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAATGAAAG+TGG | + | chr1.3:46982613-46982632 | None:intergenic | 10.0% |
| !! | GAAAATATTATAAATTAAAG+AGG | + | chr1.3:46985107-46985126 | None:intergenic | 10.0% |
| !!! | TAATATATCTAAATTTTGTT+AGG | - | chr1.3:46982218-46982237 | MS.gene073797:intron | 10.0% |
| !!! | TTTTTTTTACCAATAAAAAT+TGG | - | chr1.3:46983812-46983831 | MS.gene073797:CDS | 10.0% |
| !! | TTTAAAAAACTCACATAATA+CGG | + | chr1.3:46982258-46982277 | None:intergenic | 15.0% |
| !! | TTTATTGGTAAAAAAAACAT+TGG | + | chr1.3:46983809-46983828 | None:intergenic | 15.0% |
| !!! | TTTTTAAAGTGTATTACAAA+TGG | - | chr1.3:46983270-46983289 | MS.gene073797:CDS | 15.0% |
| !! | AAATTTAACAGTTGCAAATT+TGG | - | chr1.3:46983567-46983586 | MS.gene073797:CDS | 20.0% |
| !! | AGGAATTCAAAAAATGTAAT+AGG | - | chr1.3:46985039-46985058 | MS.gene073797:intron | 20.0% |
| !! | AGTTAGGAAAACAAATTATA+TGG | + | chr1.3:46985360-46985379 | None:intergenic | 20.0% |
| !! | ATAAATCATACAATATCTGT+TGG | + | chr1.3:46982547-46982566 | None:intergenic | 20.0% |
| !! | GAATTCAAAAAATGTAATAG+GGG | - | chr1.3:46985041-46985060 | MS.gene073797:intron | 20.0% |
| !! | GGAATTCAAAAAATGTAATA+GGG | - | chr1.3:46985040-46985059 | MS.gene073797:intron | 20.0% |
| !! | GTATGATTTATTAGATTTGT+TGG | - | chr1.3:46982556-46982575 | MS.gene073797:intron | 20.0% |
| !! | TAATCTACGATAAAAGAATA+TGG | + | chr1.3:46981302-46981321 | None:intergenic | 20.0% |
| !! | TTATCGTAGATTATTCAAAT+GGG | - | chr1.3:46981309-46981328 | MS.gene073797:intron | 20.0% |
| !! | TTCTAACATATTATGTAACA+TGG | - | chr1.3:46982994-46983013 | MS.gene073797:intron | 20.0% |
| !! | TTTATCGTAGATTATTCAAA+TGG | - | chr1.3:46981308-46981327 | MS.gene073797:intron | 20.0% |
| !!! | ATTATATAGATTTTTCAACC+GGG | - | chr1.3:46981546-46981565 | MS.gene073797:intron | 20.0% |
| !!! | ATTATGTGAGTTTTTTAAAG+TGG | - | chr1.3:46982259-46982278 | MS.gene073797:intron | 20.0% |
| !!! | ATTTTTTTCTGTAGTTCAAT+GGG | - | chr1.3:46982168-46982187 | MS.gene073797:intron | 20.0% |
| !!! | CATTATATAGATTTTTCAAC+CGG | - | chr1.3:46981545-46981564 | MS.gene073797:intron | 20.0% |
| !!! | GTATTGATAAAAGATGTATT+TGG | + | chr1.3:46984582-46984601 | None:intergenic | 20.0% |
| !!! | TAATTTTAATGCATTTTCCA+TGG | - | chr1.3:46983491-46983510 | MS.gene073797:intron | 20.0% |
| !!! | TATTTTTTTCTGTAGTTCAA+TGG | - | chr1.3:46982167-46982186 | MS.gene073797:intron | 20.0% |
| !!! | TTATGTGAGTTTTTTAAAGT+GGG | - | chr1.3:46982260-46982279 | MS.gene073797:intron | 20.0% |
| !!! | TTTTTTGAATTCCTTCATAT+AGG | + | chr1.3:46985033-46985052 | None:intergenic | 20.0% |
| !!! | TTTTTTTTATGGCTAATTCA+AGG | - | chr1.3:46982625-46982644 | MS.gene073797:intron | 20.0% |
| ! | ACATTGTCAATCAATCATAA+CGG | + | chr1.3:46982111-46982130 | None:intergenic | 25.0% |
| ! | ATATACTGTAACACATCTTT+AGG | - | chr1.3:46984920-46984939 | MS.gene073797:intron | 25.0% |
| ! | ATGTATCTAGAAATTTGCAA+AGG | + | chr1.3:46984545-46984564 | None:intergenic | 25.0% |
| ! | CAAAAACTAGAAAGCAATAT+AGG | - | chr1.3:46985242-46985261 | MS.gene073797:intron | 25.0% |
| ! | CCAATAAAACATAACAGATT+AGG | + | chr1.3:46981844-46981863 | None:intergenic | 25.0% |
| ! | GAAGAAAAAAAAACATGCAA+TGG | + | chr1.3:46984991-46985010 | None:intergenic | 25.0% |
| ! | GAAGATAATACAACATGATT+AGG | + | chr1.3:46983329-46983348 | None:intergenic | 25.0% |
| ! | TAAAACAACTCAGTAGTTAT+AGG | + | chr1.3:46983049-46983068 | None:intergenic | 25.0% |
| ! | TAACAAAAAAATGGCAGTTA+TGG | + | chr1.3:46983605-46983624 | None:intergenic | 25.0% |
| ! | TAACAATGAAAATGATTACC+AGG | + | chr1.3:46981954-46981973 | None:intergenic | 25.0% |
| ! | TAATAAGAGCCTTTATTGAT+TGG | + | chr1.3:46981519-46981538 | None:intergenic | 25.0% |
| ! | TACGTTGTTTATGTACTATT+AGG | - | chr1.3:46982727-46982746 | MS.gene073797:intron | 25.0% |
| ! | TATTATCTTCTTAAATGCAG+TGG | - | chr1.3:46983339-46983358 | MS.gene073797:intron | 25.0% |
| ! | TCAATGGAAGAAGAAAAAAA+TGG | - | chr1.3:46983069-46983088 | MS.gene073797:intron | 25.0% |
| ! | TGAGCATCATAACAAAAAAA+TGG | + | chr1.3:46983614-46983633 | None:intergenic | 25.0% |
| ! | TGCAAATTTGGAAAATTTGA+AGG | - | chr1.3:46983579-46983598 | MS.gene073797:CDS | 25.0% |
| ! | TGTATCTAGAAATTTGCAAA+GGG | + | chr1.3:46984544-46984563 | None:intergenic | 25.0% |
| ! | TTCATTCTTGCTTATTCAAA+TGG | - | chr1.3:46982692-46982711 | MS.gene073797:intron | 25.0% |
| ! | TTTATATTATTCAGTGTTGC+TGG | - | chr1.3:46982191-46982210 | MS.gene073797:intron | 25.0% |
| !! | CCTAATCTGTTATGTTTTAT+TGG | - | chr1.3:46981841-46981860 | MS.gene073797:intron | 25.0% |
| !! | CTTTTTGCATATACAAAGAA+AGG | + | chr1.3:46984721-46984740 | None:intergenic | 25.0% |
| !! | GTAAAAAAAACATTGGCTAT+GGG | + | chr1.3:46983802-46983821 | None:intergenic | 25.0% |
| !! | TCCTAAAAGCCAATTTTTAT+TGG | + | chr1.3:46983824-46983843 | None:intergenic | 25.0% |
| !! | TTATTGGTAACAGAAAAAGA+AGG | - | chr1.3:46981857-46981876 | MS.gene073797:intron | 25.0% |
| !! | TTTTCCTCAATTAAAAAGGA+GGG | + | chr1.3:46983214-46983233 | None:intergenic | 25.0% |
| !!! | ACCAATAAAAATTGGCTTTT+AGG | - | chr1.3:46983820-46983839 | MS.gene073797:CDS | 25.0% |
| !!! | AGAAGTTCATTTAGTTTGTA+AGG | - | chr1.3:46984790-46984809 | MS.gene073797:CDS | 25.0% |
| !!! | AGTTTTTGGAAATCAATTGA+AGG | + | chr1.3:46985230-46985249 | None:intergenic | 25.0% |
| !!! | CTATATTGCTTTCTAGTTTT+TGG | + | chr1.3:46985244-46985263 | None:intergenic | 25.0% |
| !!! | GTTTTTGGAAATCAATTGAA+GGG | + | chr1.3:46985229-46985248 | None:intergenic | 25.0% |
| !!! | TAAATTTTTTCTCCCAAACA+AGG | - | chr1.3:46985165-46985184 | MS.gene073797:intron | 25.0% |
| !!! | TCCTTTTTAATTGAGGAAAA+GGG | - | chr1.3:46983214-46983233 | MS.gene073797:intron | 25.0% |
| !!! | TGTTGTCCAAAACATTTTTT+GGG | - | chr1.3:46984401-46984420 | MS.gene073797:CDS | 25.0% |
| AACCAAAAAGCAAAGTTGAA+GGG | + | chr1.3:46983679-46983698 | None:intergenic | 30.0% | |
| AACTGTTGTATTCATCTTCA+GGG | - | chr1.3:46985376-46985395 | MS.gene073797:intron | 30.0% | |
| AAGAGATAACGTTTGTAACA+TGG | - | chr1.3:46984045-46984064 | MS.gene073797:intron | 30.0% | |
| AATACTCTACCAATTTGTCT+TGG | - | chr1.3:46984597-46984616 | MS.gene073797:intron | 30.0% | |
| AATGAAAATGATTACCAGGT+GGG | + | chr1.3:46981950-46981969 | None:intergenic | 30.0% | |
| ACATTCTGTTCAGTTTCATT+AGG | + | chr1.3:46983444-46983463 | None:intergenic | 30.0% | |
| ACCAATTTGTCTTGGAAAAT+AGG | - | chr1.3:46984605-46984624 | MS.gene073797:intron | 30.0% | |
| AGAGATAACGTTTGTAACAT+GGG | - | chr1.3:46984046-46984065 | MS.gene073797:intron | 30.0% | |
| AGGAAAAGGGATATATTGAA+GGG | - | chr1.3:46983227-46983246 | MS.gene073797:CDS | 30.0% | |
| ATACAATTCTTACCACCATT+TGG | + | chr1.3:46982812-46982831 | None:intergenic | 30.0% | |
| ATCTGATAAAATGCCAATTG+AGG | - | chr1.3:46982898-46982917 | MS.gene073797:intron | 30.0% | |
| ATTACAAAGAGACATACACT+AGG | + | chr1.3:46983475-46983494 | None:intergenic | 30.0% | |
| ATTGGATCTTAGTTTAGACA+TGG | - | chr1.3:46983700-46983719 | MS.gene073797:intron | 30.0% | |
| ATTTGAATGTTCAGAGGAAA+GGG | - | chr1.3:46982321-46982340 | MS.gene073797:intron | 30.0% | |
| CAAGACATCAATCCAAATTA+AGG | - | chr1.3:46985534-46985553 | MS.gene073797:CDS | 30.0% | |
| CATTCATTATCACACTAAGT+GGG | + | chr1.3:46985293-46985312 | None:intergenic | 30.0% | |
| GATAATGAACATACCTCATA+CGG | + | chr1.3:46983147-46983166 | None:intergenic | 30.0% | |
| GCACAAATTCATAAAACAAC+TGG | + | chr1.3:46983977-46983996 | None:intergenic | 30.0% | |
| GGGAGAAAAAATTTAAAGAG+AGG | + | chr1.3:46985160-46985179 | None:intergenic | 30.0% | |
| GTTGTTGAAGACAAAACTTT+CGG | - | chr1.3:46981148-46981167 | MS.gene073797:CDS | 30.0% | |
| GTTTAATTCTGATACACTGT+TGG | - | chr1.3:46981989-46982008 | MS.gene073797:intron | 30.0% | |
| TAACTGTTGTATTCATCTTC+AGG | - | chr1.3:46985375-46985394 | MS.gene073797:intron | 30.0% | |
| TAATACCTTTGCATCTTGTT+TGG | + | chr1.3:46981254-46981273 | None:intergenic | 30.0% | |
| TCGAATAAGCCAATCAATAA+AGG | - | chr1.3:46981507-46981526 | MS.gene073797:intron | 30.0% | |
| TCTTATGTTGTCAGATACAA+TGG | - | chr1.3:46982453-46982472 | MS.gene073797:intron | 30.0% | |
| TGAAGATGAATACAACAGTT+AGG | + | chr1.3:46985376-46985395 | None:intergenic | 30.0% | |
| TGTGCTTATAAACAAGAACT+AGG | + | chr1.3:46984892-46984911 | None:intergenic | 30.0% | |
| TTATAGCTCAAAACATGAGT+AGG | + | chr1.3:46983856-46983875 | None:intergenic | 30.0% | |
| TTCAAAAAATGTAATAGGGG+AGG | - | chr1.3:46985044-46985063 | MS.gene073797:intron | 30.0% | |
| TTGAATTCCTTCATATAGGA+GGG | + | chr1.3:46985029-46985048 | None:intergenic | 30.0% | |
| TTGCATAAAACTAGAAAAGC+AGG | + | chr1.3:46983649-46983668 | None:intergenic | 30.0% | |
| TTGGATCTTAGTTTAGACAT+GGG | - | chr1.3:46983701-46983720 | MS.gene073797:intron | 30.0% | |
| TTTCCTCAATTAAAAAGGAG+GGG | + | chr1.3:46983213-46983232 | None:intergenic | 30.0% | |
| TTTGAATTCCTTCATATAGG+AGG | + | chr1.3:46985030-46985049 | None:intergenic | 30.0% | |
| ! | AATACCTTTGCATCTTGTTT+GGG | + | chr1.3:46981253-46981272 | None:intergenic | 30.0% |
| ! | AATCAATTGAAGGGTTTGTT+TGG | + | chr1.3:46985220-46985239 | None:intergenic | 30.0% |
| ! | ACCAAATGAGTCTTATAAGT+AGG | + | chr1.3:46984495-46984514 | None:intergenic | 30.0% |
| ! | ATCAATTGAAGGGTTTGTTT+GGG | + | chr1.3:46985219-46985238 | None:intergenic | 30.0% |
| ! | CCAAATGAGTCTTATAAGTA+GGG | + | chr1.3:46984494-46984513 | None:intergenic | 30.0% |
| ! | CTTAATTTGGATTGATGTCT+TGG | + | chr1.3:46985536-46985555 | None:intergenic | 30.0% |
| ! | CTTTTCCTCAATTAAAAAGG+AGG | + | chr1.3:46983215-46983234 | None:intergenic | 30.0% |
| ! | GAAATCCCCAAAAAATGTTT+TGG | + | chr1.3:46984410-46984429 | None:intergenic | 30.0% |
| ! | GCAAATTATTCTAAAAGACG+TGG | - | chr1.3:46984831-46984850 | MS.gene073797:intron | 30.0% |
| ! | GGTAAAAAAAACATTGGCTA+TGG | + | chr1.3:46983803-46983822 | None:intergenic | 30.0% |
| ! | TCCCTTTTCCTCAATTAAAA+AGG | + | chr1.3:46983218-46983237 | None:intergenic | 30.0% |
| ! | TCCTATTTTCCAAGACAAAT+TGG | + | chr1.3:46984609-46984628 | None:intergenic | 30.0% |
| ! | TCTTGTTTATAAGCACATTG+AGG | - | chr1.3:46984895-46984914 | MS.gene073797:intron | 30.0% |
| ! | TGATAATGAATGGTTGTTGT+TGG | - | chr1.3:46985301-46985320 | MS.gene073797:intron | 30.0% |
| ! | TTAGGTATGCAAACACTTTT+TGG | - | chr1.3:46982745-46982764 | MS.gene073797:intron | 30.0% |
| !! | CTACTGAGTTGTTTTATCAA+TGG | - | chr1.3:46983053-46983072 | MS.gene073797:intron | 30.0% |
| !! | CTCCTTTTTAATTGAGGAAA+AGG | - | chr1.3:46983213-46983232 | MS.gene073797:intron | 30.0% |
| !! | GTTCATTTAGTTTGTAAGGT+AGG | - | chr1.3:46984794-46984813 | MS.gene073797:intron | 30.0% |
| !! | TGTTCTAAAATCCCAAATGA+AGG | - | chr1.3:46982859-46982878 | MS.gene073797:intron | 30.0% |
| !!! | AACTTTGCTTTTTGGTTCAT+TGG | - | chr1.3:46983682-46983701 | MS.gene073797:intron | 30.0% |
| !!! | CTGTTGTCCAAAACATTTTT+TGG | - | chr1.3:46984400-46984419 | MS.gene073797:CDS | 30.0% |
| !!! | GTTGTCCAAAACATTTTTTG+GGG | - | chr1.3:46984402-46984421 | MS.gene073797:CDS | 30.0% |
| !!! | TAAAAATTGGCTTTTAGGAG+TGG | - | chr1.3:46983825-46983844 | MS.gene073797:CDS | 30.0% |
| AAACTCACATAATACGGACT+TGG | + | chr1.3:46982252-46982271 | None:intergenic | 35.0% | |
| AAATGACGATGCTTCTTGTA+AGG | + | chr1.3:46982957-46982976 | None:intergenic | 35.0% | |
| AACTCACATAATACGGACTT+GGG | + | chr1.3:46982251-46982270 | None:intergenic | 35.0% | |
| AAGTACCCTATTAATAGGGA+CGG | - | chr1.3:46984746-46984765 | MS.gene073797:CDS | 35.0% | |
| AATGACGATGCTTCTTGTAA+GGG | + | chr1.3:46982956-46982975 | None:intergenic | 35.0% | |
| ACAAGCTGTTTAACCAAACA+GGG | + | chr1.3:46981348-46981367 | None:intergenic | 35.0% | |
| ACTGTTGTATTCATCTTCAG+GGG | - | chr1.3:46985377-46985396 | MS.gene073797:intron | 35.0% | |
| AGTACATAAACAACGTACAG+AGG | + | chr1.3:46982724-46982743 | None:intergenic | 35.0% | |
| ATTAAGCCGTTTATCCAAAC+AGG | + | chr1.3:46981586-46981605 | None:intergenic | 35.0% | |
| ATTATCACACTAAGTGGGAT+CGG | + | chr1.3:46985288-46985307 | None:intergenic | 35.0% | |
| CAATGAAAATGATTACCAGG+TGG | + | chr1.3:46981951-46981970 | None:intergenic | 35.0% | |
| CCATTCATTATCACACTAAG+TGG | + | chr1.3:46985294-46985313 | None:intergenic | 35.0% | |
| CCCTACTTATAAGACTCATT+TGG | - | chr1.3:46984491-46984510 | MS.gene073797:intron | 35.0% | |
| CTCATGATTTGAATGTTCAG+AGG | - | chr1.3:46982315-46982334 | MS.gene073797:intron | 35.0% | |
| CTCTAACAAAGCCTTCATTT+GGG | + | chr1.3:46982873-46982892 | None:intergenic | 35.0% | |
| GAACCAAAAAGCAAAGTTGA+AGG | + | chr1.3:46983680-46983699 | None:intergenic | 35.0% | |
| GAGATAACGTTTGTAACATG+GGG | - | chr1.3:46984047-46984066 | MS.gene073797:intron | 35.0% | |
| GAGGAAAAGGGATATATTGA+AGG | - | chr1.3:46983226-46983245 | MS.gene073797:CDS | 35.0% | |
| GATAAAAGCTGCAATATGAC+TGG | - | chr1.3:46983519-46983538 | MS.gene073797:intron | 35.0% | |
| GATTTGAATGTTCAGAGGAA+AGG | - | chr1.3:46982320-46982339 | MS.gene073797:intron | 35.0% | |
| GTAATTAGCGTCTCATCTTT+AGG | - | chr1.3:46983918-46983937 | MS.gene073797:intron | 35.0% | |
| TCATAAAACAACTGGCTACA+AGG | + | chr1.3:46983969-46983988 | None:intergenic | 35.0% | |
| TCATATAAGCCAATCCAGAA+AGG | - | chr1.3:46981816-46981835 | MS.gene073797:intron | 35.0% | |
| TGATAAAATGCCAATTGAGG+AGG | - | chr1.3:46982901-46982920 | MS.gene073797:intron | 35.0% | |
| TGCAAAGGGACTTGTATTTA+GGG | + | chr1.3:46984530-46984549 | None:intergenic | 35.0% | |
| TGCTGTGTGATTATTGTGTA+TGG | - | chr1.3:46984447-46984466 | MS.gene073797:intron | 35.0% | |
| TGGATCTTAGTTTAGACATG+GGG | - | chr1.3:46983702-46983721 | MS.gene073797:intron | 35.0% | |
| TGTTCAGTTTCATTAGGTTC+TGG | + | chr1.3:46983438-46983457 | None:intergenic | 35.0% | |
| TGTTTGCATGTGACAATGTA+TGG | - | chr1.3:46983894-46983913 | MS.gene073797:CDS | 35.0% | |
| TTAAGCCGTTTATCCAAACA+GGG | + | chr1.3:46981585-46981604 | None:intergenic | 35.0% | |
| TTGCAAAGGGACTTGTATTT+AGG | + | chr1.3:46984531-46984550 | None:intergenic | 35.0% | |
| TTGGGATTTATGGTGCAAAT+GGG | - | chr1.3:46983747-46983766 | MS.gene073797:CDS | 35.0% | |
| TTTGAATGTTCAGAGGAAAG+GGG | - | chr1.3:46982322-46982341 | MS.gene073797:intron | 35.0% | |
| ! | AATGTAATAGGGGAGGATTT+TGG | - | chr1.3:46985051-46985070 | MS.gene073797:intron | 35.0% |
| ! | ACACATCTTTAGGTTTCGTT+TGG | - | chr1.3:46984930-46984949 | MS.gene073797:intron | 35.0% |
| ! | AGGAATTTCTCACCTTGTTT+GGG | + | chr1.3:46985180-46985199 | None:intergenic | 35.0% |
| ! | AGGAGTTGTAGTTTTCACTT+GGG | + | chr1.3:46983029-46983048 | None:intergenic | 35.0% |
| ! | CACATCTTTAGGTTTCGTTT+GGG | - | chr1.3:46984931-46984950 | MS.gene073797:intron | 35.0% |
| ! | CCACTTAGTGTGATAATGAA+TGG | - | chr1.3:46985291-46985310 | MS.gene073797:intron | 35.0% |
| ! | GCAGCTTTTATCTATATCCA+TGG | + | chr1.3:46983511-46983530 | None:intergenic | 35.0% |
| ! | GCCAAAGTACCCTATTAATA+GGG | - | chr1.3:46984742-46984761 | MS.gene073797:CDS | 35.0% |
| ! | GTTTGTAACTTTTATGCACG+AGG | - | chr1.3:46983773-46983792 | MS.gene073797:CDS | 35.0% |
| ! | TAGGAGTTGTAGTTTTCACT+TGG | + | chr1.3:46983030-46983049 | None:intergenic | 35.0% |
| ! | TAGGTTGTGTTTGTTTGTTG+TGG | - | chr1.3:46982386-46982405 | MS.gene073797:intron | 35.0% |
| ! | TCAGTAACGTTTGGGATTTA+TGG | - | chr1.3:46983737-46983756 | MS.gene073797:intron | 35.0% |
| ! | TCCCTATTAATAGGGTACTT+TGG | + | chr1.3:46984746-46984765 | None:intergenic | 35.0% |
| ! | TGCCAAAGTACCCTATTAAT+AGG | - | chr1.3:46984741-46984760 | MS.gene073797:CDS | 35.0% |
| ! | TTGGTAACAGAAAAAGAAGG+AGG | - | chr1.3:46981860-46981879 | MS.gene073797:intron | 35.0% |
| ! | TTTGGGATTTATGGTGCAAA+TGG | - | chr1.3:46983746-46983765 | MS.gene073797:CDS | 35.0% |
| ! | TTTTCCAAAGCCATGGTTTT+GGG | + | chr1.3:46984019-46984038 | None:intergenic | 35.0% |
| ! | TTTTTCCAAAGCCATGGTTT+TGG | + | chr1.3:46984020-46984039 | None:intergenic | 35.0% |
| !! | AAAAGACGTGGAATTTGTTG+TGG | - | chr1.3:46984843-46984862 | MS.gene073797:intron | 35.0% |
| !! | ACATCAGCTTTTGATTGCTT+CGG | + | chr1.3:46981112-46981131 | None:intergenic | 35.0% |
| !! | ATGCAAACACTTTTTGGATG+CGG | - | chr1.3:46982751-46982770 | MS.gene073797:intron | 35.0% |
| !! | CAGCATGTTTGTTTTCTGTT+AGG | + | chr1.3:46984432-46984451 | None:intergenic | 35.0% |
| !! | CATTTAGTTTGTAAGGTAGG+TGG | - | chr1.3:46984797-46984816 | MS.gene073797:intron | 35.0% |
| !! | GCTGTTTTCATAAGCTATCT+TGG | - | chr1.3:46981397-46981416 | MS.gene073797:intron | 35.0% |
| !! | TACCCTTCAACTTTGCTTTT+TGG | - | chr1.3:46983674-46983693 | MS.gene073797:intron | 35.0% |
| !!! | GATTTTAGAACATATCCAGG+TGG | + | chr1.3:46982851-46982870 | None:intergenic | 35.0% |
| !!! | GTGTTTGTTTGTTGTGGTTT+TGG | - | chr1.3:46982392-46982411 | MS.gene073797:intron | 35.0% |
| !!! | TGGGATTTTAGAACATATCC+AGG | + | chr1.3:46982854-46982873 | None:intergenic | 35.0% |
| !!! | TGTACTTTTTTCCAAAGCCA+TGG | + | chr1.3:46984026-46984045 | None:intergenic | 35.0% |
| !!! | TGTTGTGGTTTTGGTTTTGA+TGG | - | chr1.3:46982401-46982420 | MS.gene073797:intron | 35.0% |
| AAATCCCAAACGTTACTGAC+TGG | + | chr1.3:46983736-46983755 | None:intergenic | 40.0% | |
| AAGGAAGGAAGGAAAATGGA+AGG | - | chr1.3:46984957-46984976 | MS.gene073797:intron | 40.0% | |
| AAGGTAGGTGGTAAGCATAT+TGG | - | chr1.3:46984809-46984828 | MS.gene073797:intron | 40.0% | |
| ACTAAGACCCTCCTATATGA+AGG | - | chr1.3:46985019-46985038 | MS.gene073797:intron | 40.0% | |
| AGGAAGGAAGGAAAATGGAA+GGG | - | chr1.3:46984958-46984977 | MS.gene073797:intron | 40.0% | |
| ATCCACAAACAAGCTAGCAT+TGG | + | chr1.3:46983382-46983401 | None:intergenic | 40.0% | |
| ATGACGATGCTTCTTGTAAG+GGG | + | chr1.3:46982955-46982974 | None:intergenic | 40.0% | |
| CAGCTTATTGTGACAAGTTC+TGG | + | chr1.3:46981714-46981733 | None:intergenic | 40.0% | |
| CCTCTAACAAAGCCTTCATT+TGG | + | chr1.3:46982874-46982893 | None:intergenic | 40.0% | |
| GAAAAAGAAGGAGGAAGAGA+AGG | - | chr1.3:46981869-46981888 | MS.gene073797:intron | 40.0% | |
| GACAAGCTGTTTAACCAAAC+AGG | + | chr1.3:46981349-46981368 | None:intergenic | 40.0% | |
| GAGGAATTTCTCACCTTGTT+TGG | + | chr1.3:46985181-46985200 | None:intergenic | 40.0% | |
| GCAAAGGGACTTGTATTTAG+GGG | + | chr1.3:46984529-46984548 | None:intergenic | 40.0% | |
| GTCAGATACAATGGAAGAGT+GGG | - | chr1.3:46982462-46982481 | MS.gene073797:intron | 40.0% | |
| GTTTGGGAATTAGGAGAAAG+AGG | + | chr1.3:46985203-46985222 | None:intergenic | 40.0% | |
| TAACAGATTAGGAGCCTTTC+TGG | + | chr1.3:46981833-46981852 | None:intergenic | 40.0% | |
| TAGAGAGGAAGCAATATGGT+TGG | - | chr1.3:46982774-46982793 | MS.gene073797:intron | 40.0% | |
| TCAAGAGACATTGGAGAAAG+TGG | - | chr1.3:46982486-46982505 | MS.gene073797:intron | 40.0% | |
| TCAATCCAAATTAAGGAGCC+AGG | - | chr1.3:46985541-46985560 | MS.gene073797:CDS | 40.0% | |
| TGTCAGATACAATGGAAGAG+TGG | - | chr1.3:46982461-46982480 | MS.gene073797:intron | 40.0% | |
| TTCAACAACCTTCTGCTTCT+TGG | + | chr1.3:46981137-46981156 | None:intergenic | 40.0% | |
| TTTGTGCCTGAATTCCTGTT+TGG | - | chr1.3:46983990-46984009 | MS.gene073797:intron | 40.0% | |
| ! | CTTTGCATCTTGTTTGGGAT+CGG | + | chr1.3:46981248-46981267 | None:intergenic | 40.0% |
| ! | GAAGGGTTTGTTTGGGAATT+AGG | + | chr1.3:46985212-46985231 | None:intergenic | 40.0% |
| ! | GGTGCAAGCTCAAAAAGTAT+AGG | + | chr1.3:46983948-46983967 | None:intergenic | 40.0% |
| ! | GTGCATGTCATTAGCTGTTT+TGG | - | chr1.3:46981746-46981765 | MS.gene073797:intron | 40.0% |
| ! | TGTTTGGAATCCCAAAACCA+TGG | - | chr1.3:46984006-46984025 | MS.gene073797:intron | 40.0% |
| ! | TTTTCGATCTCCTCCTCAAT+TGG | + | chr1.3:46982914-46982933 | None:intergenic | 40.0% |
| ! | TTTTCTGCTTATGCCCTGTT+TGG | - | chr1.3:46981332-46981351 | MS.gene073797:intron | 40.0% |
| ! | TTTTGGTCATGTCCAAATGG+TGG | - | chr1.3:46982797-46982816 | MS.gene073797:intron | 40.0% |
| !! | CATTAGGTTCTGGTTCTCTT+TGG | + | chr1.3:46983428-46983447 | None:intergenic | 40.0% |
| !! | CCAAATGAAGGCTTTGTTAG+AGG | - | chr1.3:46982871-46982890 | MS.gene073797:intron | 40.0% |
| !! | TAGCCCCTCCTTTTTAATTG+AGG | - | chr1.3:46983207-46983226 | MS.gene073797:intron | 40.0% |
| !!! | ATGGTTTTGGGATTCCAAAC+AGG | + | chr1.3:46984007-46984026 | None:intergenic | 40.0% |
| !!! | GGAAGCAATATGGTTGGTTT+TGG | - | chr1.3:46982780-46982799 | MS.gene073797:intron | 40.0% |
| !!! | TGGTTTTGGTCATGTCCAAA+TGG | - | chr1.3:46982794-46982813 | MS.gene073797:intron | 40.0% |
| !!! | TTGAAGGGCTGCATGTTTTT+TGG | - | chr1.3:46983242-46983261 | MS.gene073797:CDS | 40.0% |
| AAAGTGGGTCAGTGTGCTAA+GGG | - | chr1.3:46982275-46982294 | MS.gene073797:intron | 45.0% | |
| ACCCTATTAATAGGGACGGA+GGG | - | chr1.3:46984750-46984769 | MS.gene073797:CDS | 45.0% | |
| AGAGACATTGGAGAAAGTGG+TGG | - | chr1.3:46982489-46982508 | MS.gene073797:intron | 45.0% | |
| AGAGTGGGATCAAGAGACAT+TGG | - | chr1.3:46982477-46982496 | MS.gene073797:intron | 45.0% | |
| ATCGTCGTCGTCAATGTCAT+CGG | + | chr1.3:46985467-46985486 | None:intergenic | 45.0% | |
| CATGCCAGTCAGTAACGTTT+GGG | - | chr1.3:46983729-46983748 | MS.gene073797:intron | 45.0% | |
| CGACGATGATGAATTGGACT+TGG | - | chr1.3:46985480-46985499 | MS.gene073797:CDS | 45.0% | |
| CGATCCCAAACAAGATGCAA+AGG | - | chr1.3:46981246-46981265 | MS.gene073797:CDS | 45.0% | |
| GAATCCCAAAACCATGGCTT+TGG | - | chr1.3:46984012-46984031 | MS.gene073797:intron | 45.0% | |
| GATTAGGAGCCTTTCTGGAT+TGG | + | chr1.3:46981828-46981847 | None:intergenic | 45.0% | |
| GCGAAAGGAAGGAAGGAAAA+TGG | - | chr1.3:46984953-46984972 | MS.gene073797:intron | 45.0% | |
| GGAAGAGAAGGCAAAAGAGA+AGG | - | chr1.3:46981881-46981900 | MS.gene073797:intron | 45.0% | |
| GGGATTCCAAACAGGAATTC+AGG | + | chr1.3:46983999-46984018 | None:intergenic | 45.0% | |
| GTAGGCCCTGTTTGGATAAA+CGG | - | chr1.3:46981577-46981596 | MS.gene073797:intron | 45.0% | |
| GTATTCATCTTCAGGGGACT+GGG | - | chr1.3:46985383-46985402 | MS.gene073797:intron | 45.0% | |
| TAAAGTGGGTCAGTGTGCTA+AGG | - | chr1.3:46982274-46982293 | MS.gene073797:intron | 45.0% | |
| TAAGCGTGACGATGGTATGT+AGG | - | chr1.3:46982367-46982386 | MS.gene073797:intron | 45.0% | |
| TACAGTGATAAGCGTGACGA+TGG | - | chr1.3:46982359-46982378 | MS.gene073797:intron | 45.0% | |
| TACCCTATTAATAGGGACGG+AGG | - | chr1.3:46984749-46984768 | MS.gene073797:CDS | 45.0% | |
| TATAGACATGCACTTCCACC+TGG | - | chr1.3:46982833-46982852 | MS.gene073797:intron | 45.0% | |
| TCCCTCCGTCCCTATTAATA+GGG | + | chr1.3:46984754-46984773 | None:intergenic | 45.0% | |
| TGACGACGACGATGATGAAT+TGG | - | chr1.3:46985474-46985493 | MS.gene073797:CDS | 45.0% | |
| TGATGTAGCCAAGAAGCAGA+AGG | - | chr1.3:46981126-46981145 | MS.gene073797:CDS | 45.0% | |
| TGATTACCAGGTGGGACTTT+AGG | + | chr1.3:46981942-46981961 | None:intergenic | 45.0% | |
| TGGGAATTAGGAGAAAGAGG+AGG | + | chr1.3:46985200-46985219 | None:intergenic | 45.0% | |
| TGTATTCATCTTCAGGGGAC+TGG | - | chr1.3:46985382-46985401 | MS.gene073797:intron | 45.0% | |
| TTAGGTTTCGTTTGGGCGAA+AGG | - | chr1.3:46984938-46984957 | MS.gene073797:intron | 45.0% | |
| ! | AAACGTTACTGACTGGCATG+GGG | + | chr1.3:46983729-46983748 | None:intergenic | 45.0% |
| ! | ACTTTTTGGATGCGGTAGAG+AGG | - | chr1.3:46982759-46982778 | MS.gene073797:intron | 45.0% |
| ! | ATCTTGTTTGGGATCGGTTC+TGG | + | chr1.3:46981242-46981261 | None:intergenic | 45.0% |
| ! | CAAACGTTACTGACTGGCAT+GGG | + | chr1.3:46983730-46983749 | None:intergenic | 45.0% |
| ! | CTTGGACGAGTTGAATGAAC+TGG | - | chr1.3:46985498-46985517 | MS.gene073797:CDS | 45.0% |
| ! | TCTTGTTTGGGATCGGTTCT+GGG | + | chr1.3:46981241-46981260 | None:intergenic | 45.0% |
| !! | ACTGGGAGTGCTGCTAATAA+TGG | - | chr1.3:46985400-46985419 | MS.gene073797:intron | 45.0% |
| !! | GTCCAATGCTAGCTTGTTTG+TGG | - | chr1.3:46983377-46983396 | MS.gene073797:intron | 45.0% |
| !! | TCAGCTTTTGATTGCTTCGG+AGG | + | chr1.3:46981109-46981128 | None:intergenic | 45.0% |
| !!! | TTTCATTTTTTTTTTTTTTA+TGG | - | chr1.3:46982614-46982633 | MS.gene073797:intron | 5.0% |
| CAGCTCCTGGCTCCTTAATT+TGG | + | chr1.3:46985549-46985568 | None:intergenic | 50.0% | |
| CCATGCCAGTCAGTAACGTT+TGG | - | chr1.3:46983728-46983747 | MS.gene073797:intron | 50.0% | |
| CTCCCTCCGTCCCTATTAAT+AGG | + | chr1.3:46984755-46984774 | None:intergenic | 50.0% | |
| GCGGTAGAGAGGAAGCAATA+TGG | - | chr1.3:46982770-46982789 | MS.gene073797:intron | 50.0% | |
| GGGCTAAGAATGACCGTATG+AGG | - | chr1.3:46983131-46983150 | MS.gene073797:intron | 50.0% | |
| GTTTCGTTTGGGCGAAAGGA+AGG | - | chr1.3:46984942-46984961 | MS.gene073797:intron | 50.0% | |
| TCGTCGTCGTCAATGTCATC+GGG | + | chr1.3:46985466-46985485 | None:intergenic | 50.0% | |
| TGAGGAGGAGATCGAAAAGC+AGG | - | chr1.3:46982916-46982935 | MS.gene073797:intron | 50.0% | |
| ! | CCAAACGTTACTGACTGGCA+TGG | + | chr1.3:46983731-46983750 | None:intergenic | 50.0% |
| ! | TTCAACCGGGTTTTCTGCGT+AGG | - | chr1.3:46981559-46981578 | MS.gene073797:intron | 50.0% |
| ! | TTTTCTGCGTAGGCCCTGTT+TGG | - | chr1.3:46981569-46981588 | MS.gene073797:intron | 50.0% |
| AGTCAGCCTAAAGTCCCACC+TGG | - | chr1.3:46981933-46981952 | MS.gene073797:intron | 55.0% | |
| CGTTTGGGCGAAAGGAAGGA+AGG | - | chr1.3:46984946-46984965 | MS.gene073797:intron | 55.0% | |
| CTTAGCCCTCTCTGCCTGTT+GGG | + | chr1.3:46983119-46983138 | None:intergenic | 55.0% | |
| GGACGAGAGAGATGCCAGTT+TGG | - | chr1.3:46983090-46983109 | MS.gene073797:intron | 55.0% | |
| TCTTAGCCCTCTCTGCCTGT+TGG | + | chr1.3:46983120-46983139 | None:intergenic | 55.0% | |
| !! | ATCGGTTCTGGGTTGAACGG+AGG | + | chr1.3:46981230-46981249 | None:intergenic | 55.0% |
| !! | GGGATCGGTTCTGGGTTGAA+CGG | + | chr1.3:46981233-46981252 | None:intergenic | 55.0% |
| CAGGGCCTACGCAGAAAACC+CGG | + | chr1.3:46981567-46981586 | None:intergenic | 60.0% | |
| TGCCAGTTTGGCTGCCCAAC+AGG | - | chr1.3:46983102-46983121 | MS.gene073797:intron | 60.0% | |
| TGCCTGTTGGGCAGCCAAAC+TGG | + | chr1.3:46983107-46983126 | None:intergenic | 60.0% | |
| ! | CCACCTGTTGCTGAGGTGCT+GGG | + | chr1.3:46985427-46985446 | None:intergenic | 60.0% |
| CCCAGCACCTCAGCAACAGG+TGG | - | chr1.3:46985424-46985443 | MS.gene073797:CDS | 65.0% | |
| GCCACCTGTTGCTGAGGTGC+TGG | + | chr1.3:46985428-46985447 | None:intergenic | 65.0% | |
| GGCTGCCCAACAGGCAGAGA+GGG | - | chr1.3:46983111-46983130 | MS.gene073797:intron | 65.0% | |
| GGTCCCAGCACCTCAGCAAC+AGG | - | chr1.3:46985421-46985440 | MS.gene073797:CDS | 65.0% | |
| GTCTGCGCCACCTGTTGCTG+AGG | + | chr1.3:46985434-46985453 | None:intergenic | 65.0% | |
| TGGCTGCCCAACAGGCAGAG+AGG | - | chr1.3:46983110-46983129 | MS.gene073797:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 46981103 | 46985576 | 46981103 | ID=MS.gene073797 |
| chr1.3 | mRNA | 46981103 | 46985576 | 46981103 | ID=MS.gene073797.t1;Parent=MS.gene073797 |
| chr1.3 | exon | 46985412 | 46985576 | 46985412 | ID=MS.gene073797.t1.exon1;Parent=MS.gene073797.t1 |
| chr1.3 | CDS | 46985412 | 46985576 | 46985412 | ID=cds.MS.gene073797.t1;Parent=MS.gene073797.t1 |
| chr1.3 | exon | 46984725 | 46984809 | 46984725 | ID=MS.gene073797.t1.exon2;Parent=MS.gene073797.t1 |
| chr1.3 | CDS | 46984725 | 46984809 | 46984725 | ID=cds.MS.gene073797.t1;Parent=MS.gene073797.t1 |
| chr1.3 | exon | 46984299 | 46984439 | 46984299 | ID=MS.gene073797.t1.exon3;Parent=MS.gene073797.t1 |
| chr1.3 | CDS | 46984299 | 46984439 | 46984299 | ID=cds.MS.gene073797.t1;Parent=MS.gene073797.t1 |
| chr1.3 | exon | 46984124 | 46984212 | 46984124 | ID=MS.gene073797.t1.exon4;Parent=MS.gene073797.t1 |
| chr1.3 | CDS | 46984124 | 46984212 | 46984124 | ID=cds.MS.gene073797.t1;Parent=MS.gene073797.t1 |
| chr1.3 | exon | 46983742 | 46983930 | 46983742 | ID=MS.gene073797.t1.exon5;Parent=MS.gene073797.t1 |
| chr1.3 | CDS | 46983742 | 46983930 | 46983742 | ID=cds.MS.gene073797.t1;Parent=MS.gene073797.t1 |
| chr1.3 | exon | 46983527 | 46983657 | 46983527 | ID=MS.gene073797.t1.exon6;Parent=MS.gene073797.t1 |
| chr1.3 | CDS | 46983527 | 46983657 | 46983527 | ID=cds.MS.gene073797.t1;Parent=MS.gene073797.t1 |
| chr1.3 | exon | 46983218 | 46983320 | 46983218 | ID=MS.gene073797.t1.exon7;Parent=MS.gene073797.t1 |
| chr1.3 | CDS | 46983218 | 46983320 | 46983218 | ID=cds.MS.gene073797.t1;Parent=MS.gene073797.t1 |
| chr1.3 | exon | 46981103 | 46981282 | 46981103 | ID=MS.gene073797.t1.exon8;Parent=MS.gene073797.t1 |
| chr1.3 | CDS | 46981103 | 46981282 | 46981103 | ID=cds.MS.gene073797.t1;Parent=MS.gene073797.t1 |
| Gene Sequence |
| Protein sequence |
