Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073815.t1 | XP_013468288.1 | 94.5 | 928 | 30 | 2 | 1 | 910 | 1 | 925 | 0.00E+00 | 1573.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073815.t1 | Q9SF47 | 50.1 | 962 | 370 | 17 | 1 | 910 | 1 | 904 | 2.8e-235 | 816.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073815.t1 | A0A072VW73 | 94.5 | 928 | 30 | 2 | 1 | 910 | 1 | 925 | 0.0e+00 | 1573.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene054635 | MS.gene073815 | PPI |
| MS.gene48495 | MS.gene073815 | PPI |
| MS.gene38722 | MS.gene073815 | PPI |
| MS.gene012989 | MS.gene073815 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073815.t1 | MTR_1g067380 | 94.073 | 928 | 34 | 2 | 1 | 910 | 1 | 925 | 0.0 | 1785 |
| MS.gene073815.t1 | MTR_7g100370 | 61.283 | 935 | 269 | 19 | 1 | 910 | 1 | 867 | 0.0 | 1055 |
| MS.gene073815.t1 | MTR_3g101590 | 66.667 | 306 | 100 | 1 | 602 | 905 | 522 | 827 | 5.38e-141 | 440 |
| MS.gene073815.t1 | MTR_3g101590 | 58.268 | 127 | 43 | 1 | 1 | 117 | 1 | 127 | 4.43e-40 | 160 |
| MS.gene073815.t1 | MTR_1g019740 | 76.230 | 244 | 57 | 1 | 663 | 905 | 132 | 375 | 1.05e-134 | 408 |
| MS.gene073815.t1 | MTR_1g019740 | 76.230 | 244 | 57 | 1 | 663 | 905 | 272 | 515 | 1.05e-132 | 408 |
| MS.gene073815.t1 | MTR_1g019740 | 60.440 | 91 | 33 | 2 | 1 | 88 | 1 | 91 | 9.43e-27 | 115 |
| MS.gene073815.t1 | MTR_3g101590 | 65.596 | 218 | 73 | 1 | 602 | 817 | 522 | 739 | 1.08e-88 | 299 |
| MS.gene073815.t1 | MTR_3g101590 | 58.268 | 127 | 43 | 1 | 1 | 117 | 1 | 127 | 2.32e-40 | 160 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073815.t1 | AT3G09560 | 71.531 | 418 | 97 | 5 | 510 | 910 | 492 | 904 | 0.0 | 629 |
| MS.gene073815.t1 | AT3G09560 | 71.531 | 418 | 97 | 5 | 510 | 910 | 492 | 904 | 0.0 | 629 |
| MS.gene073815.t1 | AT3G09560 | 71.531 | 418 | 97 | 5 | 510 | 910 | 492 | 904 | 0.0 | 629 |
| MS.gene073815.t1 | AT3G09560 | 71.531 | 418 | 97 | 5 | 510 | 910 | 492 | 904 | 0.0 | 629 |
| MS.gene073815.t1 | AT5G42870 | 54.818 | 467 | 188 | 8 | 452 | 909 | 477 | 929 | 6.32e-166 | 508 |
| MS.gene073815.t1 | AT5G42870 | 61.458 | 96 | 37 | 0 | 1 | 96 | 1 | 96 | 5.09e-34 | 141 |
| MS.gene073815.t1 | AT5G42870 | 53.961 | 467 | 187 | 9 | 452 | 909 | 477 | 924 | 2.66e-160 | 493 |
| MS.gene073815.t1 | AT5G42870 | 51.538 | 130 | 58 | 1 | 1 | 130 | 1 | 125 | 5.22e-34 | 141 |
| MS.gene073815.t1 | AT5G42870 | 54.306 | 418 | 168 | 8 | 452 | 860 | 477 | 880 | 3.13e-140 | 440 |
| MS.gene073815.t1 | AT5G42870 | 51.538 | 130 | 58 | 1 | 1 | 130 | 1 | 125 | 4.54e-34 | 141 |
Find 215 sgRNAs with CRISPR-Local
Find 377 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTATTTCAATACCTGTTTC+AGG | 0.195193 | 1.3:-47199425 | None:intergenic |
| GATCATAGTATTTCGGATTC+TGG | 0.200059 | 1.3:+47196702 | MS.gene073815:CDS |
| ATTCTGAAGTTGGAGATTTA+TGG | 0.208971 | 1.3:-47197595 | None:intergenic |
| CATGTTTCCACCAACTTCTT+TGG | 0.239861 | 1.3:+47200842 | MS.gene073815:CDS |
| CATATGTATCTTGATAATTC+CGG | 0.245852 | 1.3:+47196576 | MS.gene073815:CDS |
| TTGGATTAATGTCAGGAAAA+TGG | 0.251410 | 1.3:+47199333 | MS.gene073815:intron |
| ACTACAACTCATGGAATTAT+TGG | 0.260148 | 1.3:+47200969 | MS.gene073815:CDS |
| AGTATCGGTGTCGCATTGTC+TGG | 0.267399 | 1.3:-47197123 | None:intergenic |
| AATCCATTCTATGCGGGATT+TGG | 0.279917 | 1.3:+47200589 | MS.gene073815:CDS |
| GAAGTACCCCTTGGTATGTT+AGG | 0.283434 | 1.3:+47196475 | MS.gene073815:CDS |
| AGAATCAAAATCTTGTTATC+AGG | 0.284268 | 1.3:+47198099 | MS.gene073815:CDS |
| AAATTTCAAGGTGTTCTTAA+AGG | 0.290532 | 1.3:+47196504 | MS.gene073815:CDS |
| GTTGTTAGAATAAGTGTTAA+TGG | 0.298990 | 1.3:+47196537 | MS.gene073815:CDS |
| AAGGAGGCGGATGAGGATAA+AGG | 0.302738 | 1.3:+47196615 | MS.gene073815:CDS |
| TAGACTTGATCATAGTATTT+CGG | 0.316398 | 1.3:+47196695 | MS.gene073815:CDS |
| ATCATAGTATTTCGGATTCT+GGG | 0.332106 | 1.3:+47196703 | MS.gene073815:CDS |
| GACCAAATCCATTCTGGTTT+GGG | 0.332198 | 1.3:+47197842 | MS.gene073815:CDS |
| AAAGGTGACCAAATCCATTC+TGG | 0.332792 | 1.3:+47197836 | MS.gene073815:CDS |
| TGCCTTTAGTTGGCAAAGAT+TGG | 0.332891 | 1.3:+47198921 | MS.gene073815:CDS |
| AATTCATACGGGACTTTAGA+TGG | 0.334398 | 1.3:+47196846 | MS.gene073815:CDS |
| GTCACCTTTACTTGAAGTTT+CGG | 0.339502 | 1.3:-47197822 | None:intergenic |
| GTTCTAGGAATGGCTGCATT+TGG | 0.343203 | 1.3:+47198164 | MS.gene073815:CDS |
| TACCCAAACCAGAATGGATT+TGG | 0.346923 | 1.3:-47197844 | None:intergenic |
| TCCACAGGAATTGCATCTTT+CGG | 0.348332 | 1.3:-47198206 | None:intergenic |
| TTTGATGATTTATCGGAATA+CGG | 0.351594 | 1.3:+47196819 | MS.gene073815:CDS |
| TTGATGCTCATATATACTTA+TGG | 0.355928 | 1.3:+47198638 | MS.gene073815:CDS |
| ATGAATGTAGTTGGGAAAGT+TGG | 0.356341 | 1.3:+47196351 | MS.gene073815:CDS |
| GAACTTAGTTACAGAAAGAT+TGG | 0.358190 | 1.3:+47200628 | MS.gene073815:CDS |
| TTGACCATCTTTAAGATTCA+AGG | 0.360096 | 1.3:-47198468 | None:intergenic |
| GTATTTCTAGATTCCGAGTC+TGG | 0.360338 | 1.3:+47198350 | MS.gene073815:CDS |
| TCAAAAGTGCCTCACCTTCT+CGG | 0.362301 | 1.3:-47199571 | None:intergenic |
| ATATGTATCTTGATAATTCC+GGG | 0.366297 | 1.3:+47196577 | MS.gene073815:CDS |
| CAGGTTAAGTAGGAAGTTCC+TGG | 0.368225 | 1.3:-47199406 | None:intergenic |
| ACAAATAGTCCTGCTTCTTC+TGG | 0.368912 | 1.3:+47197569 | MS.gene073815:CDS |
| TGACCAAATCCATTCTGGTT+TGG | 0.372114 | 1.3:+47197841 | MS.gene073815:CDS |
| AAGGCTGCTCCTCTTGTTCT+AGG | 0.373703 | 1.3:+47198149 | MS.gene073815:CDS |
| CAAGGATGCTATCTGTTCAT+TGG | 0.383147 | 1.3:-47198450 | None:intergenic |
| GAAATAACAACAGGTCCATT+AGG | 0.385877 | 1.3:-47199521 | None:intergenic |
| TTGACCCTTCGAAAAGGATT+AGG | 0.387862 | 1.3:-47198287 | None:intergenic |
| ATGGGTTTGGTAGCTGCTGC+TGG | 0.398274 | 1.3:+47198014 | MS.gene073815:CDS |
| GGCAATGGAGAGTTTAGTTC+CGG | 0.400673 | 1.3:+47197038 | MS.gene073815:CDS |
| ACCCCTTGGTATGTTAGGTT+TGG | 0.403585 | 1.3:+47196480 | MS.gene073815:CDS |
| TGAAGTCCTGATTCTGAAGT+TGG | 0.404508 | 1.3:-47197605 | None:intergenic |
| ACACTCACCAAGACCATCTC+TGG | 0.405325 | 1.3:-47196900 | None:intergenic |
| GTTAGGTTTGGTAAATTTCA+AGG | 0.406463 | 1.3:+47196492 | MS.gene073815:CDS |
| ATTGCATCTTTCGGCTCAAC+AGG | 0.408265 | 1.3:-47198197 | None:intergenic |
| AAATCTCCAACTTCAGAATC+AGG | 0.408685 | 1.3:+47197599 | MS.gene073815:CDS |
| TTCTGCTCTGATTCCGAGAT+AGG | 0.409037 | 1.3:-47196945 | None:intergenic |
| ATCTAGAAATACATCTTCAT+TGG | 0.414020 | 1.3:-47198339 | None:intergenic |
| AGTTTGTTTGTTATTCTGTT+CGG | 0.414097 | 1.3:-47197699 | None:intergenic |
| CAATTCCTGTGGAATATTCC+AGG | 0.414250 | 1.3:+47198216 | MS.gene073815:CDS |
| ATAAATCATCAAAAGAATCT+TGG | 0.418398 | 1.3:-47196809 | None:intergenic |
| CTTCTCGAATTTCGACCTCC+AGG | 0.419917 | 1.3:-47197226 | None:intergenic |
| CGCTGATTATATTAGCAAGC+TGG | 0.421106 | 1.3:+47197076 | MS.gene073815:CDS |
| CCTCTGTGGTCATGAACTTA+AGG | 0.422266 | 1.3:+47197986 | MS.gene073815:CDS |
| AGGAGGCGGATGAGGATAAA+GGG | 0.423802 | 1.3:+47196616 | MS.gene073815:CDS |
| TGGTTATGGTTGTACCGCTT+TGG | 0.424119 | 1.3:+47197148 | MS.gene073815:CDS |
| TTTCGGATTCTGGGGTGCTT+CGG | 0.425911 | 1.3:+47196712 | MS.gene073815:CDS |
| GGCAAAGATTGGACACAATC+TGG | 0.426891 | 1.3:+47198932 | MS.gene073815:CDS |
| GCACCACCAAATGGATGAAA+AGG | 0.426945 | 1.3:-47196411 | None:intergenic |
| CTTCCTACTTAACCTGAAAC+AGG | 0.429313 | 1.3:+47199413 | MS.gene073815:CDS |
| TAGTTCCGGCGAAACTGCTT+GGG | 0.432847 | 1.3:+47197052 | MS.gene073815:CDS |
| TGAATGTAGTTGGGAAAGTT+GGG | 0.435349 | 1.3:+47196352 | MS.gene073815:CDS |
| CCTATAAATTAGTCGACATC+TGG | 0.437927 | 1.3:-47201004 | None:intergenic |
| GTCCAATCTTTGCCAACTAA+AGG | 0.443917 | 1.3:-47198923 | None:intergenic |
| CTTCTTGACAAACTTTGAGT+GGG | 0.446006 | 1.3:-47197172 | None:intergenic |
| TTGCCAAATCCCGCATAGAA+TGG | 0.455784 | 1.3:-47200592 | None:intergenic |
| TTAGTTCCGGCGAAACTGCT+TGG | 0.456179 | 1.3:+47197051 | MS.gene073815:CDS |
| CTGGACGCAGATGGAGACTT+TGG | 0.458111 | 1.3:+47198264 | MS.gene073815:CDS |
| TGTTCGGTATAATCAGCAAT+AGG | 0.461473 | 1.3:-47197683 | None:intergenic |
| ATGGTCTTGGTGAGTGTTGA+TGG | 0.461897 | 1.3:+47196906 | MS.gene073815:CDS |
| CTCATATATACTTATGGAAG+TGG | 0.463033 | 1.3:+47198644 | MS.gene073815:CDS |
| TCATGAACTTAAGGCAGGTA+TGG | 0.463748 | 1.3:+47197995 | MS.gene073815:CDS |
| GGACAGTTCATGCCTTTAGT+TGG | 0.463774 | 1.3:+47198911 | MS.gene073815:CDS |
| ACCAACTTCTTTGGTCGAGC+AGG | 0.464848 | 1.3:+47200851 | MS.gene073815:CDS |
| CTTATTATCTTCAACTGAAG+TGG | 0.473559 | 1.3:-47197765 | None:intergenic |
| GATGCTATCTGTTCATTGGT+TGG | 0.473752 | 1.3:-47198446 | None:intergenic |
| TTGATGATTTATCGGAATAC+GGG | 0.474307 | 1.3:+47196820 | MS.gene073815:CDS |
| ATGAAGAGGATTCGTCGGTT+GGG | 0.475265 | 1.3:+47196742 | MS.gene073815:CDS |
| TCCTCAATTTCATCTAGGTC+CGG | 0.478482 | 1.3:+47196992 | MS.gene073815:CDS |
| TCTTCTTGACAAACTTTGAG+TGG | 0.479754 | 1.3:-47197173 | None:intergenic |
| ACTTAAGGCAGGTATGGGTT+TGG | 0.479885 | 1.3:+47198001 | MS.gene073815:CDS |
| GATGTACTTGACGTGGGAAA+AGG | 0.482711 | 1.3:+47198130 | MS.gene073815:CDS |
| AGGATTCGTCGGTTGGGCCT+CGG | 0.484270 | 1.3:+47196748 | MS.gene073815:CDS |
| TGAGTACTCGATGTTGGAGT+TGG | 0.484391 | 1.3:-47198386 | None:intergenic |
| CAATGCGACACCGATACTAA+TGG | 0.484513 | 1.3:+47197128 | MS.gene073815:CDS |
| GAGGTTGAGAAGGATTCATC+AGG | 0.484529 | 1.3:+47197635 | MS.gene073815:CDS |
| GTTTGAAGCCCATCGAATAT+CGG | 0.487032 | 1.3:+47198040 | MS.gene073815:CDS |
| TATATTGACGGCTCCTATCT+CGG | 0.488621 | 1.3:+47196932 | MS.gene073815:CDS |
| CACCACCAAATGGATGAAAA+GGG | 0.491241 | 1.3:-47196410 | None:intergenic |
| TCGAGAAGATCTTTCGCAGC+AGG | 0.493532 | 1.3:+47197241 | MS.gene073815:CDS |
| CCTGTTGTTATTTCACCCGA+TGG | 0.494608 | 1.3:+47199530 | MS.gene073815:CDS |
| CGGGCTTACCCAAACCAGAA+TGG | 0.495211 | 1.3:-47197850 | None:intergenic |
| ATACCTGTTTCAGGTTAAGT+AGG | 0.495257 | 1.3:-47199416 | None:intergenic |
| GACACCGATACTAATGGTTA+TGG | 0.497528 | 1.3:+47197134 | MS.gene073815:CDS |
| TGCTCCTCTTGTTCTAGGAA+TGG | 0.497537 | 1.3:+47198154 | MS.gene073815:CDS |
| AGAGAATTCTGTCGACTCGC+AGG | 0.499664 | 1.3:+47196869 | MS.gene073815:CDS |
| GATTATAATCCATTCTATGC+GGG | 0.501076 | 1.3:+47200583 | MS.gene073815:CDS |
| ATCGTGATTTCAGACGTTGA+TGG | 0.501083 | 1.3:+47198676 | MS.gene073815:CDS |
| TAACCTTCAGTTTCTCTACA+AGG | 0.502045 | 1.3:+47198498 | MS.gene073815:CDS |
| AGAAGAAGCAGGACTATTTG+TGG | 0.502356 | 1.3:-47197567 | None:intergenic |
| TAATAATTCAAGTGAGGTGG+TGG | 0.502796 | 1.3:+47197790 | MS.gene073815:CDS |
| CTCCATCTGCGTCCAGGCGA+GGG | 0.503360 | 1.3:-47198257 | None:intergenic |
| ACATCAACAGCACCACCAAA+TGG | 0.504876 | 1.3:-47196420 | None:intergenic |
| GTATCGGTGTCGCATTGTCT+GGG | 0.506944 | 1.3:-47197122 | None:intergenic |
| AACAACAGGTCCATTAGGTA+AGG | 0.509268 | 1.3:-47199516 | None:intergenic |
| TTACTTGAAGTTTCGGCTTG+CGG | 0.509381 | 1.3:-47197815 | None:intergenic |
| ATTGTCTTGACCCTTCGAAA+AGG | 0.509842 | 1.3:-47198293 | None:intergenic |
| AATCCTCTGCCGATATTCGA+TGG | 0.510384 | 1.3:-47198049 | None:intergenic |
| ATAATCAGCAATAGGAGAGC+AGG | 0.512498 | 1.3:-47197675 | None:intergenic |
| GATGAAGAGGATTCGTCGGT+TGG | 0.513362 | 1.3:+47196741 | MS.gene073815:CDS |
| AGAAATCCTCAATTTCATCT+AGG | 0.514893 | 1.3:+47196987 | MS.gene073815:CDS |
| CAAAGTCTCCATCTGCGTCC+AGG | 0.514955 | 1.3:-47198263 | None:intergenic |
| GAAGATCTTTCGCAGCAGGC+TGG | 0.518383 | 1.3:+47197245 | MS.gene073815:CDS |
| AGTGAAGGAAATAATCCATC+GGG | 0.522392 | 1.3:-47199545 | None:intergenic |
| CATTCTGGTTTGGGTAAGCC+CGG | 0.523523 | 1.3:+47197851 | MS.gene073815:CDS |
| GATCAACAATCACCCTCGCC+TGG | 0.524657 | 1.3:+47198245 | MS.gene073815:CDS |
| TTCTCGAATTTCGACCTCCA+GGG | 0.525306 | 1.3:-47197225 | None:intergenic |
| AAGAGATGCTAGTTCGTCAC+TGG | 0.525309 | 1.3:+47197280 | MS.gene073815:CDS |
| CATATGTCGGTCTCCTCAGC+CGG | 0.526383 | 1.3:-47197011 | None:intergenic |
| CCATCGGGTGAAATAACAAC+AGG | 0.526401 | 1.3:-47199530 | None:intergenic |
| CACCCTCGCCTGGACGCAGA+TGG | 0.526617 | 1.3:+47198255 | MS.gene073815:CDS |
| AGTTCCTGGTCAAATATGCC+TGG | 0.527570 | 1.3:-47199392 | None:intergenic |
| TAGAATGGATTATAATCAGA+AGG | 0.530145 | 1.3:-47200577 | None:intergenic |
| CATGAACTTAAGGCAGGTAT+GGG | 0.531651 | 1.3:+47197996 | MS.gene073815:CDS |
| GCTGATTATATTAGCAAGCT+GGG | 0.534908 | 1.3:+47197077 | MS.gene073815:CDS |
| TGCAGGAAGACTACAACTCA+TGG | 0.536596 | 1.3:+47200960 | MS.gene073815:intron |
| TTCTCATCCAGAGATGGTCT+TGG | 0.537691 | 1.3:+47196893 | MS.gene073815:CDS |
| CGGTTGGGCCTCGGATTCAA+AGG | 0.540380 | 1.3:+47196757 | MS.gene073815:CDS |
| ACCTGCTCGACCAAAGAAGT+TGG | 0.540794 | 1.3:-47200852 | None:intergenic |
| ATTCAAAGGACGGAATCTGA+TGG | 0.541125 | 1.3:+47196771 | MS.gene073815:CDS |
| TCAAGATCAAGAGGTTGAGA+AGG | 0.541589 | 1.3:+47197625 | MS.gene073815:CDS |
| TCTCCATCTGCGTCCAGGCG+AGG | 0.542422 | 1.3:-47198258 | None:intergenic |
| TCCATTGCCTTCGCATATGT+CGG | 0.543783 | 1.3:-47197024 | None:intergenic |
| AACTCCAACATCGAGTACTC+AGG | 0.548772 | 1.3:+47198388 | MS.gene073815:CDS |
| TGATTGTTGATCACCATCCC+TGG | 0.549997 | 1.3:-47198234 | None:intergenic |
| GTTGGGAGTTTGATAAGTCA+AGG | 0.551287 | 1.3:+47196369 | MS.gene073815:CDS |
| AGAAAGATTGGAATCCCAAA+GGG | 0.552573 | 1.3:+47200640 | MS.gene073815:CDS |
| GTGGCTATTAGTCAACGTAT+TGG | 0.556400 | 1.3:+47200780 | MS.gene073815:CDS |
| TGCTCGACCAAAGAAGTTGG+TGG | 0.556711 | 1.3:-47200849 | None:intergenic |
| AGCGGCCCAAGCAGTTTCGC+CGG | 0.560082 | 1.3:-47197057 | None:intergenic |
| AACCTTCAGTTTCTCTACAA+GGG | 0.560610 | 1.3:+47198499 | MS.gene073815:CDS |
| CTTCACAAAATAAGCCTCCC+CGG | 0.566704 | 1.3:-47196595 | None:intergenic |
| GAGTGCGCGTGCAATTGTCC+AGG | 0.566883 | 1.3:+47199374 | MS.gene073815:CDS |
| ACTCAAAGTTTGTCAAGAAG+AGG | 0.568849 | 1.3:+47197175 | MS.gene073815:CDS |
| CAAGCCGAAACTTCAAGTAA+AGG | 0.570423 | 1.3:+47197818 | MS.gene073815:CDS |
| GCATCCTTGAATCTTAAAGA+TGG | 0.570712 | 1.3:+47198464 | MS.gene073815:CDS |
| TTCTAAAAGAGTTCCAGACT+CGG | 0.570867 | 1.3:-47198363 | None:intergenic |
| GCAGCCATTCCTAGAACAAG+AGG | 0.571366 | 1.3:-47198158 | None:intergenic |
| ATCCTCTGCCGATATTCGAT+GGG | 0.572162 | 1.3:-47198048 | None:intergenic |
| GATCCCTGAGTACTCGATGT+TGG | 0.572537 | 1.3:-47198392 | None:intergenic |
| TTCAAAGGACGGAATCTGAT+GGG | 0.573920 | 1.3:+47196772 | MS.gene073815:CDS |
| CTCGGAATCAGAGCAGAATG+AGG | 0.574005 | 1.3:+47196950 | MS.gene073815:CDS |
| TGTGGTCATGAACTTAAGGC+AGG | 0.574969 | 1.3:+47197990 | MS.gene073815:CDS |
| TTGTCCAGGCATATTTGACC+AGG | 0.577217 | 1.3:+47199388 | MS.gene073815:CDS |
| ACCGACATATGCGAAGGCAA+TGG | 0.577830 | 1.3:+47197023 | MS.gene073815:CDS |
| GCCGGACCTAGATGAAATTG+AGG | 0.581165 | 1.3:-47196993 | None:intergenic |
| CCATCCCTGGAATATTCCAC+AGG | 0.583110 | 1.3:-47198221 | None:intergenic |
| GATTCCGTCCTTTGAATCCG+AGG | 0.583634 | 1.3:-47196765 | None:intergenic |
| GCGCACTCAGAAACAATAGT+TGG | 0.583699 | 1.3:-47199359 | None:intergenic |
| GAATACGGGTCTAATTCATA+CGG | 0.586339 | 1.3:+47196834 | MS.gene073815:CDS |
| AAGTGAAGGAAATAATCCAT+CGG | 0.586577 | 1.3:-47199546 | None:intergenic |
| GTTCAAAATTGCTTGTCTAG+AGG | 0.588437 | 1.3:+47200435 | MS.gene073815:CDS |
| TACCAAACCTAACATACCAA+GGG | 0.590463 | 1.3:-47196482 | None:intergenic |
| GAGAATTCTGTCGACTCGCA+GGG | 0.591012 | 1.3:+47196870 | MS.gene073815:CDS |
| TTCTTGACAAACTTTGAGTG+GGG | 0.591743 | 1.3:-47197171 | None:intergenic |
| GGAGGCGGATGAGGATAAAG+GGG | 0.593652 | 1.3:+47196617 | MS.gene073815:CDS |
| AATAGTCCTGCTTCTTCTGG+TGG | 0.594001 | 1.3:+47197572 | MS.gene073815:CDS |
| AATATTCATCATTAACCCGA+AGG | 0.596230 | 1.3:+47200666 | MS.gene073815:CDS |
| TTATGGCCACCAGAAGAAGC+AGG | 0.598102 | 1.3:-47197578 | None:intergenic |
| TCACCTTCTCGGAAAAGTGA+AGG | 0.598769 | 1.3:-47199560 | None:intergenic |
| ATCAGGACTTCAAGATCAAG+AGG | 0.598812 | 1.3:+47197616 | MS.gene073815:CDS |
| GGACACAATCTGGTGTGGCA+AGG | 0.599007 | 1.3:+47198942 | MS.gene073815:CDS |
| GAATAATAATTCAAGTGAGG+TGG | 0.599747 | 1.3:+47197787 | MS.gene073815:CDS |
| GCAGGGTTCTCATCCAGAGA+TGG | 0.601147 | 1.3:+47196887 | MS.gene073815:CDS |
| CTTAAGTTCATGACCACAGA+GGG | 0.601364 | 1.3:-47197985 | None:intergenic |
| GAAAGATGAAGAGGATTCGT+CGG | 0.604588 | 1.3:+47196737 | MS.gene073815:CDS |
| TAAGAATAATAATTCAAGTG+AGG | 0.607755 | 1.3:+47197784 | MS.gene073815:CDS |
| TCATAGTATTTCGGATTCTG+GGG | 0.608364 | 1.3:+47196704 | MS.gene073815:CDS |
| GCTTCGGTTGAAAGATGAAG+AGG | 0.609083 | 1.3:+47196728 | MS.gene073815:CDS |
| TAAAGAGATGTACTTGACGT+GGG | 0.616671 | 1.3:+47198124 | MS.gene073815:CDS |
| GTACATTTAGAAGTACCCCT+TGG | 0.616851 | 1.3:+47196466 | MS.gene073815:CDS |
| ATTTCATCTAGGTCCGGCTG+AGG | 0.617666 | 1.3:+47196998 | MS.gene073815:CDS |
| CCTGTGGAATATTCCAGGGA+TGG | 0.618027 | 1.3:+47198221 | MS.gene073815:CDS |
| AATTCCTGTGGAATATTCCA+GGG | 0.618544 | 1.3:+47198217 | MS.gene073815:CDS |
| AGCCCATCGAATATCGGCAG+AGG | 0.618776 | 1.3:+47198046 | MS.gene073815:CDS |
| TTAAAGAGATGTACTTGACG+TGG | 0.623862 | 1.3:+47198123 | MS.gene073815:CDS |
| TTACCAAACCTAACATACCA+AGG | 0.625890 | 1.3:-47196483 | None:intergenic |
| AGAATGGATTATAATCAGAA+GGG | 0.627237 | 1.3:-47200576 | None:intergenic |
| ATTGTTGTTCAGCAACAAGA+TGG | 0.627892 | 1.3:+47196444 | MS.gene073815:CDS |
| ACAACCATAACCATTAGTAT+CGG | 0.628845 | 1.3:-47197138 | None:intergenic |
| CAGAAAGATTGGAATCCCAA+AGG | 0.628924 | 1.3:+47200639 | MS.gene073815:CDS |
| TGGGCCTCGGATTCAAAGGA+CGG | 0.630389 | 1.3:+47196761 | MS.gene073815:CDS |
| AGATGCTAGTTCGTCACTGG+AGG | 0.630996 | 1.3:+47197283 | MS.gene073815:CDS |
| AATACGGGTCTAATTCATAC+GGG | 0.631102 | 1.3:+47196835 | MS.gene073815:CDS |
| AATTAGTCGACATCTGGCAA+TGG | 0.632372 | 1.3:-47200998 | None:intergenic |
| TATGTATCTTGATAATTCCG+GGG | 0.634354 | 1.3:+47196578 | MS.gene073815:CDS |
| ACTCCAACATCGAGTACTCA+GGG | 0.639208 | 1.3:+47198389 | MS.gene073815:CDS |
| GCCGAAAGATGCAATTCCTG+TGG | 0.644290 | 1.3:+47198205 | MS.gene073815:CDS |
| GGATTGGAGATCTCCCTCTG+TGG | 0.647021 | 1.3:+47197972 | MS.gene073815:intron |
| AACTTTGAGTGGGGCCAAAG+CGG | 0.647796 | 1.3:-47197162 | None:intergenic |
| TGATTATAATCCATTCTATG+CGG | 0.649806 | 1.3:+47200582 | MS.gene073815:CDS |
| GACATGTCAGTATCAAATGA+CGG | 0.651466 | 1.3:+47197722 | MS.gene073815:CDS |
| AACCCTTGTAGAGAAACTGA+AGG | 0.651797 | 1.3:-47198501 | None:intergenic |
| GAGGAGACCGACATATGCGA+AGG | 0.656528 | 1.3:+47197017 | MS.gene073815:CDS |
| ACCACCAAATGGATGAAAAG+GGG | 0.657193 | 1.3:-47196409 | None:intergenic |
| TGTTGATGGTCATATATTGA+CGG | 0.659029 | 1.3:+47196920 | MS.gene073815:CDS |
| AGATTGGACACAATCTGGTG+TGG | 0.664917 | 1.3:+47198937 | MS.gene073815:CDS |
| CAGCTTGCTAATATAATCAG+CGG | 0.667836 | 1.3:-47197075 | None:intergenic |
| GTGGAAACATGTCATTGACG+AGG | 0.671751 | 1.3:-47200830 | None:intergenic |
| AGAAGCAGGACTATTTGTGG+AGG | 0.675554 | 1.3:-47197564 | None:intergenic |
| GTATCTTGATAATTCCGGGG+AGG | 0.679242 | 1.3:+47196581 | MS.gene073815:CDS |
| TGGAAACATGTCATTGACGA+GGG | 0.689709 | 1.3:-47200829 | None:intergenic |
| ACCAAACCTAACATACCAAG+GGG | 0.693606 | 1.3:-47196481 | None:intergenic |
| CCTTAAGTTCATGACCACAG+AGG | 0.761472 | 1.3:-47197986 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAATTGAATGT+TGG | - | chr1.3:47200527-47200546 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTTTTTTGC+AGG | + | chr1.3:47200537-47200556 | MS.gene073815:intron | 10.0% |
| !! | AAAATAAAAACTGATTATGA+TGG | - | chr1.3:47199927-47199946 | None:intergenic | 15.0% |
| !! | AAATAAAAACTGATTATGAT+GGG | - | chr1.3:47199926-47199945 | None:intergenic | 15.0% |
| !! | TAATCTTAACAAAATTGATT+TGG | + | chr1.3:47199837-47199856 | MS.gene073815:intron | 15.0% |
| !! | TTAATATTTAATGCTTAACT+TGG | + | chr1.3:47199314-47199333 | MS.gene073815:intron | 15.0% |
| !!! | AAATATAGAGGTTTTAATAT+TGG | - | chr1.3:47199482-47199501 | None:intergenic | 15.0% |
| !!! | TTATTCATCTTATAATTTTC+AGG | + | chr1.3:47197951-47197970 | MS.gene073815:intron | 15.0% |
| !!! | TTCCTAAATTTTACAATATT+TGG | + | chr1.3:47199717-47199736 | MS.gene073815:intron | 15.0% |
| !!! | TTTTATGTATTTATTTATGC+AGG | + | chr1.3:47198992-47199011 | MS.gene073815:intron | 15.0% |
| !! | AAAATATGTTAGTAAGTAGT+AGG | + | chr1.3:47200011-47200030 | MS.gene073815:intron | 20.0% |
| !! | AATAAGTAATAATGCTTCTT+AGG | + | chr1.3:47198722-47198741 | MS.gene073815:intron | 20.0% |
| !! | AGTGGAAAATTTCTTTAATT+AGG | - | chr1.3:47199622-47199641 | None:intergenic | 20.0% |
| !! | ATAAAAACGTATAAACACAA+AGG | - | chr1.3:47200314-47200333 | None:intergenic | 20.0% |
| !! | ATAAATCATCAAAAGAATCT+TGG | - | chr1.3:47196812-47196831 | None:intergenic | 20.0% |
| !! | ATTAAAACCTCTATATTTAC+AGG | + | chr1.3:47199484-47199503 | MS.gene073815:intron | 20.0% |
| !! | ATTATCAAACAAGTAATTAC+TGG | - | chr1.3:47197911-47197930 | None:intergenic | 20.0% |
| !! | CATGACTTAACAAAAATAAT+GGG | - | chr1.3:47199866-47199885 | None:intergenic | 20.0% |
| !! | GACCAAATATTGTAAAATTT+AGG | - | chr1.3:47199722-47199741 | None:intergenic | 20.0% |
| !! | TAAGAATAATAATTCAAGTG+AGG | + | chr1.3:47197784-47197803 | MS.gene073815:CDS | 20.0% |
| !! | TCATGACTTAACAAAAATAA+TGG | - | chr1.3:47199867-47199886 | None:intergenic | 20.0% |
| !! | TGAAAATATGTTCTTAGTAA+TGG | + | chr1.3:47200211-47200230 | MS.gene073815:intron | 20.0% |
| !!! | AGATTCTTTTGATGATTTAT+CGG | + | chr1.3:47196812-47196831 | MS.gene073815:CDS | 20.0% |
| !!! | AGTGATAATTTTTTGAGTAA+TGG | + | chr1.3:47196669-47196688 | MS.gene073815:CDS | 20.0% |
| !!! | GACTTGATATATTGTATTTT+TGG | + | chr1.3:47200372-47200391 | MS.gene073815:intron | 20.0% |
| !!! | TATGAACAAATGGTATTTTA+AGG | + | chr1.3:47199694-47199713 | MS.gene073815:intron | 20.0% |
| !!! | TATTTACTTTTTCATTCTAG+TGG | - | chr1.3:47199189-47199208 | None:intergenic | 20.0% |
| !!! | TTTTTATTTGTGAATATTGC+AGG | + | chr1.3:47200943-47200962 | MS.gene073815:intron | 20.0% |
| ! | AAATGATGCAAAAACTAACA+GGG | + | chr1.3:47200753-47200772 | MS.gene073815:intron | 25.0% |
| ! | ATAAAAAATACGCACCTTAA+TGG | - | chr1.3:47198978-47198997 | None:intergenic | 25.0% |
| ! | ATCTAGAAATACATCTTCAT+TGG | - | chr1.3:47198342-47198361 | None:intergenic | 25.0% |
| ! | CCAAAATGCAATTAGTTAAA+TGG | + | chr1.3:47199053-47199072 | MS.gene073815:intron | 25.0% |
| ! | GAAAAAGTAAATACACGAAA+TGG | + | chr1.3:47199196-47199215 | MS.gene073815:intron | 25.0% |
| ! | GATTGCAAATTATGAACAAA+TGG | + | chr1.3:47199684-47199703 | MS.gene073815:intron | 25.0% |
| ! | GTTGTTAGAATAAGTGTTAA+TGG | + | chr1.3:47196537-47196556 | MS.gene073815:CDS | 25.0% |
| ! | TAAATGATGCAAAAACTAAC+AGG | + | chr1.3:47200752-47200771 | MS.gene073815:intron | 25.0% |
| ! | TAGACTTGATCATAGTATTT+CGG | + | chr1.3:47196695-47196714 | MS.gene073815:CDS | 25.0% |
| ! | TCAAACTTGTCATTAAAATG+TGG | - | chr1.3:47200899-47200918 | None:intergenic | 25.0% |
| ! | TCATTAAAATGTGGAATTTG+TGG | - | chr1.3:47200890-47200909 | None:intergenic | 25.0% |
| ! | TGATTATAATCCATTCTATG+CGG | + | chr1.3:47200582-47200601 | MS.gene073815:CDS | 25.0% |
| ! | TTGATATTCATCTACTGTTT+AGG | + | chr1.3:47198542-47198561 | MS.gene073815:intron | 25.0% |
| ! | TTGATGCTCATATATACTTA+TGG | + | chr1.3:47198638-47198657 | MS.gene073815:CDS | 25.0% |
| !! | AAATTTCAAGGTGTTCTTAA+AGG | + | chr1.3:47196504-47196523 | MS.gene073815:CDS | 25.0% |
| !! | AGAATCAAAATCTTGTTATC+AGG | + | chr1.3:47198099-47198118 | MS.gene073815:CDS | 25.0% |
| !! | ATATGTATCTTGATAATTCC+GGG | + | chr1.3:47196577-47196596 | MS.gene073815:CDS | 25.0% |
| !! | CATATGTATCTTGATAATTC+CGG | + | chr1.3:47196576-47196595 | MS.gene073815:CDS | 25.0% |
| !! | CCATTTAACTAATTGCATTT+TGG | - | chr1.3:47199056-47199075 | None:intergenic | 25.0% |
| !! | CTACTTACTAACATATTTTC+AGG | - | chr1.3:47200010-47200029 | None:intergenic | 25.0% |
| !! | GAAGTTCAAATGTTTTATGT+AGG | + | chr1.3:47199885-47199904 | MS.gene073815:intron | 25.0% |
| !! | TAGTTTTTGCATCATTTAGT+TGG | - | chr1.3:47200750-47200769 | None:intergenic | 25.0% |
| !! | TGAAATAACCAAGTGTTTTA+TGG | + | chr1.3:47199439-47199458 | MS.gene073815:intron | 25.0% |
| !! | TGTTCATTTTCATATACAAC+AGG | - | chr1.3:47197398-47197417 | None:intergenic | 25.0% |
| !! | TTTGATGATTTATCGGAATA+CGG | + | chr1.3:47196819-47196838 | MS.gene073815:CDS | 25.0% |
| !!! | AGAATGGATTATAATCAGAA+GGG | - | chr1.3:47200579-47200598 | None:intergenic | 25.0% |
| !!! | AGTTTGTTTGTTATTCTGTT+CGG | - | chr1.3:47197702-47197721 | None:intergenic | 25.0% |
| !!! | ATCTTACAAGCCAATTTTTT+AGG | + | chr1.3:47200042-47200061 | MS.gene073815:intron | 25.0% |
| !!! | CATCTTATAATTTTCAGGAT+TGG | + | chr1.3:47197956-47197975 | MS.gene073815:intron | 25.0% |
| !!! | TAGAATGGATTATAATCAGA+AGG | - | chr1.3:47200580-47200599 | None:intergenic | 25.0% |
| !!! | TCTTACAAGCCAATTTTTTA+GGG | + | chr1.3:47200043-47200062 | MS.gene073815:intron | 25.0% |
| !!! | TGAGTTTTGTTTATTAAGAG+AGG | + | chr1.3:47198595-47198614 | MS.gene073815:intron | 25.0% |
| !!! | TTCTTTTTTTCGCTTCTTTT+AGG | + | chr1.3:47198876-47198895 | MS.gene073815:intron | 25.0% |
| !!! | TTTTGATTCTTAAGTATTGC+CGG | - | chr1.3:47198089-47198108 | None:intergenic | 25.0% |
| AAACCTCTATATTTACAGGA+TGG | + | chr1.3:47199488-47199507 | MS.gene073815:intron | 30.0% | |
| AAGTGAAGGAAATAATCCAT+CGG | - | chr1.3:47199549-47199568 | None:intergenic | 30.0% | |
| AATATTCATCATTAACCCGA+AGG | + | chr1.3:47200666-47200685 | MS.gene073815:CDS | 30.0% | |
| AATTGTTAAGATTCCCACAT+TGG | + | chr1.3:47199973-47199992 | MS.gene073815:intron | 30.0% | |
| ACAACCATAACCATTAGTAT+CGG | - | chr1.3:47197141-47197160 | None:intergenic | 30.0% | |
| ACCATCTTAGAATTTGGATT+GGG | - | chr1.3:47200080-47200099 | None:intergenic | 30.0% | |
| ACTACAACTCATGGAATTAT+TGG | + | chr1.3:47200969-47200988 | MS.gene073815:CDS | 30.0% | |
| ACTCATACCATCTTAGAATT+TGG | - | chr1.3:47200086-47200105 | None:intergenic | 30.0% | |
| AGAAATCCTCAATTTCATCT+AGG | + | chr1.3:47196987-47197006 | MS.gene073815:CDS | 30.0% | |
| AGATAAATCACCACAACTAT+AGG | - | chr1.3:47199286-47199305 | None:intergenic | 30.0% | |
| AGGTATTTCAATTACACAAC+AGG | + | chr1.3:47198615-47198634 | MS.gene073815:intron | 30.0% | |
| ATAAACACAAAGGTAATGCA+TGG | - | chr1.3:47200304-47200323 | None:intergenic | 30.0% | |
| ATATGTTAGTAAGTAGTAGG+AGG | + | chr1.3:47200014-47200033 | MS.gene073815:intron | 30.0% | |
| ATCATAGTATTTCGGATTCT+GGG | + | chr1.3:47196703-47196722 | MS.gene073815:CDS | 30.0% | |
| CTCATATATACTTATGGAAG+TGG | + | chr1.3:47198644-47198663 | MS.gene073815:CDS | 30.0% | |
| CTTATTATCTTCAACTGAAG+TGG | - | chr1.3:47197768-47197787 | None:intergenic | 30.0% | |
| GAACTTAGTTACAGAAAGAT+TGG | + | chr1.3:47200628-47200647 | MS.gene073815:CDS | 30.0% | |
| GAATAATAATTCAAGTGAGG+TGG | + | chr1.3:47197787-47197806 | MS.gene073815:CDS | 30.0% | |
| GACAATTACCATAAAACACT+TGG | - | chr1.3:47199450-47199469 | None:intergenic | 30.0% | |
| GATGGAACTATTACAAAGTA+AGG | + | chr1.3:47198694-47198713 | MS.gene073815:intron | 30.0% | |
| GATTATAATCCATTCTATGC+GGG | + | chr1.3:47200583-47200602 | MS.gene073815:CDS | 30.0% | |
| TACCATCTTAGAATTTGGAT+TGG | - | chr1.3:47200081-47200100 | None:intergenic | 30.0% | |
| TCAAAAGCAAAATACAGCTA+TGG | + | chr1.3:47199243-47199262 | MS.gene073815:intron | 30.0% | |
| TTGGATTAATGTCAGGAAAA+TGG | + | chr1.3:47199333-47199352 | MS.gene073815:intron | 30.0% | |
| TTTCCATCCTGTAAATATAG+AGG | - | chr1.3:47199494-47199513 | None:intergenic | 30.0% | |
| ! | AAGAAATTTTCCACTTGCTT+TGG | + | chr1.3:47199627-47199646 | MS.gene073815:intron | 30.0% |
| ! | AGAAATTTTCCACTTGCTTT+GGG | + | chr1.3:47199628-47199647 | MS.gene073815:intron | 30.0% |
| ! | AGTGACATAATTTTGTGTTC+GGG | - | chr1.3:47200467-47200486 | None:intergenic | 30.0% |
| ! | ATGATGAATATTTTGCCCTT+TGG | - | chr1.3:47200658-47200677 | None:intergenic | 30.0% |
| ! | CAGTGACATAATTTTGTGTT+CGG | - | chr1.3:47200468-47200487 | None:intergenic | 30.0% |
| ! | GTTAGGTTTGGTAAATTTCA+AGG | + | chr1.3:47196492-47196511 | MS.gene073815:CDS | 30.0% |
| ! | GTTATTTCAATACCTGTTTC+AGG | - | chr1.3:47199428-47199447 | None:intergenic | 30.0% |
| ! | TAACTGGAGTAGGATTTTTA+AGG | + | chr1.3:47199030-47199049 | MS.gene073815:intron | 30.0% |
| ! | TATGTATCTTGATAATTCCG+GGG | + | chr1.3:47196578-47196597 | MS.gene073815:CDS | 30.0% |
| ! | TGATGAATATTTTGCCCTTT+GGG | - | chr1.3:47200657-47200676 | None:intergenic | 30.0% |
| ! | TGTTCATTTTCATCAACTAC+AGG | - | chr1.3:47197344-47197363 | None:intergenic | 30.0% |
| ! | TTATTCATCGATTGTGGATT+GGG | - | chr1.3:47200281-47200300 | None:intergenic | 30.0% |
| ! | TTGATGATTTATCGGAATAC+GGG | + | chr1.3:47196820-47196839 | MS.gene073815:CDS | 30.0% |
| ! | TTGTTCATTTTCGTCAACTA+CGG | - | chr1.3:47197507-47197526 | None:intergenic | 30.0% |
| !! | AGAGCACTTTTCTCAAAAAT+CGG | - | chr1.3:47198830-47198849 | None:intergenic | 30.0% |
| !! | ATTCTGAAGTTGGAGATTTA+TGG | - | chr1.3:47197598-47197617 | None:intergenic | 30.0% |
| !! | TGTTGATGGTCATATATTGA+CGG | + | chr1.3:47196920-47196939 | MS.gene073815:CDS | 30.0% |
| !! | TTGACCATCTTTAAGATTCA+AGG | - | chr1.3:47198471-47198490 | None:intergenic | 30.0% |
| !!! | CTTACAAGCCAATTTTTTAG+GGG | + | chr1.3:47200044-47200063 | MS.gene073815:intron | 30.0% |
| !!! | GGTTTTTTGTGATTGACAAA+TGG | - | chr1.3:47197207-47197226 | None:intergenic | 30.0% |
| AAAAACAACTTCTCAGCACA+GGG | - | chr1.3:47197881-47197900 | None:intergenic | 35.0% | |
| AAATCCTACTCCAGTTAAAC+TGG | - | chr1.3:47199027-47199046 | None:intergenic | 35.0% | |
| AAATCGGCAATAATAGCTTC+TGG | - | chr1.3:47198814-47198833 | None:intergenic | 35.0% | |
| AAATCTCCAACTTCAGAATC+AGG | + | chr1.3:47197599-47197618 | MS.gene073815:CDS | 35.0% | |
| AACCTTCAGTTTCTCTACAA+GGG | + | chr1.3:47198499-47198518 | MS.gene073815:CDS | 35.0% | |
| AATACGGGTCTAATTCATAC+GGG | + | chr1.3:47196835-47196854 | MS.gene073815:CDS | 35.0% | |
| AATCGGCAATAATAGCTTCT+GGG | - | chr1.3:47198813-47198832 | None:intergenic | 35.0% | |
| AATGCTTCTTAGGCTACAAA+GGG | + | chr1.3:47198732-47198751 | MS.gene073815:intron | 35.0% | |
| AATTCATACGGGACTTTAGA+TGG | + | chr1.3:47196846-47196865 | MS.gene073815:CDS | 35.0% | |
| AATTCCTGTGGAATATTCCA+GGG | + | chr1.3:47198217-47198236 | MS.gene073815:CDS | 35.0% | |
| ACAGTAGAAGATGCTTCTTA+AGG | - | chr1.3:47199102-47199121 | None:intergenic | 35.0% | |
| ACTCAAAGTTTGTCAAGAAG+AGG | + | chr1.3:47197175-47197194 | MS.gene073815:CDS | 35.0% | |
| AGAAAGATTGGAATCCCAAA+GGG | + | chr1.3:47200640-47200659 | MS.gene073815:CDS | 35.0% | |
| AGCTATGGATGATCTTATTG+CGG | + | chr1.3:47199258-47199277 | MS.gene073815:intron | 35.0% | |
| AGTGAAGGAAATAATCCATC+GGG | - | chr1.3:47199548-47199567 | None:intergenic | 35.0% | |
| ATGAATGTAGTTGGGAAAGT+TGG | + | chr1.3:47196351-47196370 | MS.gene073815:CDS | 35.0% | |
| CTTCTTGACAAACTTTGAGT+GGG | - | chr1.3:47197175-47197194 | None:intergenic | 35.0% | |
| GAAATAACAACAGGTCCATT+AGG | - | chr1.3:47199524-47199543 | None:intergenic | 35.0% | |
| GAATACGGGTCTAATTCATA+CGG | + | chr1.3:47196834-47196853 | MS.gene073815:CDS | 35.0% | |
| GACATGTCAGTATCAAATGA+CGG | + | chr1.3:47197722-47197741 | MS.gene073815:CDS | 35.0% | |
| GATCATAGTATTTCGGATTC+TGG | + | chr1.3:47196702-47196721 | MS.gene073815:CDS | 35.0% | |
| GATGGAAAAACCTTACCTAA+TGG | + | chr1.3:47199506-47199525 | MS.gene073815:CDS | 35.0% | |
| GCATCCTTGAATCTTAAAGA+TGG | + | chr1.3:47198464-47198483 | MS.gene073815:CDS | 35.0% | |
| GCTGATTATATTAGCAAGCT+GGG | + | chr1.3:47197077-47197096 | MS.gene073815:CDS | 35.0% | |
| GTCACCTTTACTTGAAGTTT+CGG | - | chr1.3:47197825-47197844 | None:intergenic | 35.0% | |
| GTCCTTAAAAATTGCTTCTG+AGG | - | chr1.3:47198419-47198438 | None:intergenic | 35.0% | |
| GTCTAACTATCCAGTTTAAC+TGG | + | chr1.3:47199014-47199033 | MS.gene073815:intron | 35.0% | |
| GTTCAAAATTGCTTGTCTAG+AGG | + | chr1.3:47200435-47200454 | MS.gene073815:CDS | 35.0% | |
| TAAAGAGATGTACTTGACGT+GGG | + | chr1.3:47198124-47198143 | MS.gene073815:CDS | 35.0% | |
| TAACCTTCAGTTTCTCTACA+AGG | + | chr1.3:47198498-47198517 | MS.gene073815:CDS | 35.0% | |
| TAATAATTCAAGTGAGGTGG+TGG | + | chr1.3:47197790-47197809 | MS.gene073815:CDS | 35.0% | |
| TAATGCTTCTTAGGCTACAA+AGG | + | chr1.3:47198731-47198750 | MS.gene073815:intron | 35.0% | |
| TACCAAACCTAACATACCAA+GGG | - | chr1.3:47196485-47196504 | None:intergenic | 35.0% | |
| TCACTCAACCCCTAAAAAAT+TGG | - | chr1.3:47200055-47200074 | None:intergenic | 35.0% | |
| TCAGAGACTTGAAATATCCA+GGG | - | chr1.3:47200354-47200373 | None:intergenic | 35.0% | |
| TCATAGTATTTCGGATTCTG+GGG | + | chr1.3:47196704-47196723 | MS.gene073815:CDS | 35.0% | |
| TCTTCTTGACAAACTTTGAG+TGG | - | chr1.3:47197176-47197195 | None:intergenic | 35.0% | |
| TGAATGTAGTTGGGAAAGTT+GGG | + | chr1.3:47196352-47196371 | MS.gene073815:CDS | 35.0% | |
| TGTTCGGTATAATCAGCAAT+AGG | - | chr1.3:47197686-47197705 | None:intergenic | 35.0% | |
| TTAAAGAGATGTACTTGACG+TGG | + | chr1.3:47198123-47198142 | MS.gene073815:CDS | 35.0% | |
| TTACCAAACCTAACATACCA+AGG | - | chr1.3:47196486-47196505 | None:intergenic | 35.0% | |
| TTCTTGACAAACTTTGAGTG+GGG | - | chr1.3:47197174-47197193 | None:intergenic | 35.0% | |
| TTGTCAATCACAAAAAACCC+TGG | + | chr1.3:47197208-47197227 | MS.gene073815:CDS | 35.0% | |
| ! | AAATTTTCCACTTGCTTTGG+GGG | + | chr1.3:47199630-47199649 | MS.gene073815:intron | 35.0% |
| ! | AGTTTCTCTACAAGGGTTTT+AGG | + | chr1.3:47198506-47198525 | MS.gene073815:CDS | 35.0% |
| ! | ATTGTTGTTCAGCAACAAGA+TGG | + | chr1.3:47196444-47196463 | MS.gene073815:CDS | 35.0% |
| ! | CAAGCAATTTTGAACTCATG+TGG | - | chr1.3:47200430-47200449 | None:intergenic | 35.0% |
| ! | CTCCTCAGAAGCAATTTTTA+AGG | + | chr1.3:47198414-47198433 | MS.gene073815:CDS | 35.0% |
| ! | GAAATTTTCCACTTGCTTTG+GGG | + | chr1.3:47199629-47199648 | MS.gene073815:intron | 35.0% |
| ! | GCTTAACTTGGATTAATGTC+AGG | + | chr1.3:47199326-47199345 | MS.gene073815:intron | 35.0% |
| ! | GTTATTCATCGATTGTGGAT+TGG | - | chr1.3:47200282-47200301 | None:intergenic | 35.0% |
| ! | TAATCAAGAAAGCACACCTT+CGG | - | chr1.3:47200685-47200704 | None:intergenic | 35.0% |
| ! | TGTTCATTTTCGTCAACTAC+GGG | - | chr1.3:47197506-47197525 | None:intergenic | 35.0% |
| ! | TTCTAAAAGAGTTCCAGACT+CGG | - | chr1.3:47198366-47198385 | None:intergenic | 35.0% |
| !! | AAGTGCTCTAAACAGTTTTG+AGG | + | chr1.3:47198841-47198860 | MS.gene073815:intron | 35.0% |
| !! | ACCTTACAAACCAGTTTTGT+AGG | + | chr1.3:47200243-47200262 | MS.gene073815:intron | 35.0% |
| !! | ATACCTGTTTCAGGTTAAGT+AGG | - | chr1.3:47199419-47199438 | None:intergenic | 35.0% |
| !! | CAGCTTGCTAATATAATCAG+CGG | - | chr1.3:47197078-47197097 | None:intergenic | 35.0% |
| !! | CCTTACAAACCAGTTTTGTA+GGG | + | chr1.3:47200244-47200263 | MS.gene073815:intron | 35.0% |
| !! | CTTACAAACCAGTTTTGTAG+GGG | + | chr1.3:47200245-47200264 | MS.gene073815:intron | 35.0% |
| !! | TCTTTTAGGTCTGACGTTTT+GGG | + | chr1.3:47198890-47198909 | MS.gene073815:intron | 35.0% |
| !! | TGAGCTATTTGCTTGCTATT+GGG | + | chr1.3:47200121-47200140 | MS.gene073815:intron | 35.0% |
| !! | TTCTTTTAGGTCTGACGTTT+TGG | + | chr1.3:47198889-47198908 | MS.gene073815:intron | 35.0% |
| !! | TTGAGCTATTTGCTTGCTAT+TGG | + | chr1.3:47200120-47200139 | MS.gene073815:intron | 35.0% |
| !!! | AATTTTTTAGGGGTTGAGTG+AGG | + | chr1.3:47200054-47200073 | MS.gene073815:intron | 35.0% |
| !!! | TATTTTGTCTAGTTCTTCCC+AGG | + | chr1.3:47200722-47200741 | MS.gene073815:intron | 35.0% |
| !!! | TGCTGAGAAGTTGTTTTTCT+TGG | + | chr1.3:47197883-47197902 | MS.gene073815:intron | 35.0% |
| AAAGGTGACCAAATCCATTC+TGG | + | chr1.3:47197836-47197855 | MS.gene073815:CDS | 40.0% | |
| AACAACAGGTCCATTAGGTA+AGG | - | chr1.3:47199519-47199538 | None:intergenic | 40.0% | |
| AACCCTTGTAGAGAAACTGA+AGG | - | chr1.3:47198504-47198523 | None:intergenic | 40.0% | |
| AATCCATTCTATGCGGGATT+TGG | + | chr1.3:47200589-47200608 | MS.gene073815:CDS | 40.0% | |
| ACAAATAGTCCTGCTTCTTC+TGG | + | chr1.3:47197569-47197588 | MS.gene073815:CDS | 40.0% | |
| ACCAAACCTAACATACCAAG+GGG | - | chr1.3:47196484-47196503 | None:intergenic | 40.0% | |
| ACCACCAAATGGATGAAAAG+GGG | - | chr1.3:47196412-47196431 | None:intergenic | 40.0% | |
| AGAAGAAGCAGGACTATTTG+TGG | - | chr1.3:47197570-47197589 | None:intergenic | 40.0% | |
| AGCTCAGAAATGCTCTTACA+AGG | + | chr1.3:47200491-47200510 | MS.gene073815:intron | 40.0% | |
| AGGTCATATCTCATCCAATG+TGG | - | chr1.3:47199990-47200009 | None:intergenic | 40.0% | |
| ATAATCAGCAATAGGAGAGC+AGG | - | chr1.3:47197678-47197697 | None:intergenic | 40.0% | |
| ATCAGGACTTCAAGATCAAG+AGG | + | chr1.3:47197616-47197635 | MS.gene073815:CDS | 40.0% | |
| ATCGGCAATAATAGCTTCTG+GGG | - | chr1.3:47198812-47198831 | None:intergenic | 40.0% | |
| ATCGTGATTTCAGACGTTGA+TGG | + | chr1.3:47198676-47198695 | MS.gene073815:CDS | 40.0% | |
| ATTCAAAGGACGGAATCTGA+TGG | + | chr1.3:47196771-47196790 | MS.gene073815:CDS | 40.0% | |
| ATTGTCTTGACCCTTCGAAA+AGG | - | chr1.3:47198296-47198315 | None:intergenic | 40.0% | |
| CAAAAACTAACAGGGTGAAG+TGG | + | chr1.3:47200761-47200780 | MS.gene073815:intron | 40.0% | |
| CAAGCCGAAACTTCAAGTAA+AGG | + | chr1.3:47197818-47197837 | MS.gene073815:CDS | 40.0% | |
| CAAGGATGCTATCTGTTCAT+TGG | - | chr1.3:47198453-47198472 | None:intergenic | 40.0% | |
| CAATTCCTGTGGAATATTCC+AGG | + | chr1.3:47198216-47198235 | MS.gene073815:CDS | 40.0% | |
| CACCACCAAATGGATGAAAA+GGG | - | chr1.3:47196413-47196432 | None:intergenic | 40.0% | |
| CAGAAAGATTGGAATCCCAA+AGG | + | chr1.3:47200639-47200658 | MS.gene073815:CDS | 40.0% | |
| CATGAACTTAAGGCAGGTAT+GGG | + | chr1.3:47197996-47198015 | MS.gene073815:CDS | 40.0% | |
| CATGTTTCCACCAACTTCTT+TGG | + | chr1.3:47200842-47200861 | MS.gene073815:CDS | 40.0% | |
| CTATCCAGTTTAACTGGAGT+AGG | + | chr1.3:47199020-47199039 | MS.gene073815:intron | 40.0% | |
| CTTAAGTTCATGACCACAGA+GGG | - | chr1.3:47197988-47198007 | None:intergenic | 40.0% | |
| CTTCCTACTTAACCTGAAAC+AGG | + | chr1.3:47199413-47199432 | MS.gene073815:CDS | 40.0% | |
| GAAAAACAACTTCTCAGCAC+AGG | - | chr1.3:47197882-47197901 | None:intergenic | 40.0% | |
| GAAAGATGAAGAGGATTCGT+CGG | + | chr1.3:47196737-47196756 | MS.gene073815:CDS | 40.0% | |
| GACACCGATACTAATGGTTA+TGG | + | chr1.3:47197134-47197153 | MS.gene073815:CDS | 40.0% | |
| GATGCTATCTGTTCATTGGT+TGG | - | chr1.3:47198449-47198468 | None:intergenic | 40.0% | |
| GCAAATAGCTCAACAGATCT+TGG | - | chr1.3:47200113-47200132 | None:intergenic | 40.0% | |
| GGTCATATCTCATCCAATGT+GGG | - | chr1.3:47199989-47200008 | None:intergenic | 40.0% | |
| GTAAGCGCACTCATCAAATA+AGG | + | chr1.3:47199758-47199777 | MS.gene073815:intron | 40.0% | |
| GTCAGAGACTTGAAATATCC+AGG | - | chr1.3:47200355-47200374 | None:intergenic | 40.0% | |
| GTCCAATCTTTGCCAACTAA+AGG | - | chr1.3:47198926-47198945 | None:intergenic | 40.0% | |
| GTGGCTATTAGTCAACGTAT+TGG | + | chr1.3:47200780-47200799 | MS.gene073815:CDS | 40.0% | |
| GTTGGGAGTTTGATAAGTCA+AGG | + | chr1.3:47196369-47196388 | MS.gene073815:CDS | 40.0% | |
| TAACTCAACCCCTACAAAAC+TGG | - | chr1.3:47200256-47200275 | None:intergenic | 40.0% | |
| TATATTGACGGCTCCTATCT+CGG | + | chr1.3:47196932-47196951 | MS.gene073815:CDS | 40.0% | |
| TATTGCGGTACCTATAGTTG+TGG | + | chr1.3:47199273-47199292 | MS.gene073815:intron | 40.0% | |
| TCAAGATCAAGAGGTTGAGA+AGG | + | chr1.3:47197625-47197644 | MS.gene073815:CDS | 40.0% | |
| TCAATCACAAAAAACCCTGG+AGG | + | chr1.3:47197211-47197230 | MS.gene073815:CDS | 40.0% | |
| TCATGAACTTAAGGCAGGTA+TGG | + | chr1.3:47197995-47198014 | MS.gene073815:CDS | 40.0% | |
| TCCACAGGAATTGCATCTTT+CGG | - | chr1.3:47198209-47198228 | None:intergenic | 40.0% | |
| TCCTCAATTTCATCTAGGTC+CGG | + | chr1.3:47196992-47197011 | MS.gene073815:CDS | 40.0% | |
| TCTTATCACTTCCATCCGAA+CGG | - | chr1.3:47200401-47200420 | None:intergenic | 40.0% | |
| TGCCTTTAGTTGGCAAAGAT+TGG | + | chr1.3:47198921-47198940 | MS.gene073815:CDS | 40.0% | |
| TGGAAACATGTCATTGACGA+GGG | - | chr1.3:47200832-47200851 | None:intergenic | 40.0% | |
| TTCAAAGGACGGAATCTGAT+GGG | + | chr1.3:47196772-47196791 | MS.gene073815:CDS | 40.0% | |
| TTGACCCTTCGAAAAGGATT+AGG | - | chr1.3:47198290-47198309 | None:intergenic | 40.0% | |
| ! | AATCAAGAAAGCACACCTTC+GGG | - | chr1.3:47200684-47200703 | None:intergenic | 40.0% |
| ! | CGCTGATTATATTAGCAAGC+TGG | + | chr1.3:47197076-47197095 | MS.gene073815:CDS | 40.0% |
| ! | GCATGGTTATTCATCGATTG+TGG | - | chr1.3:47200287-47200306 | None:intergenic | 40.0% |
| ! | GCCCAATCCAAATTCTAAGA+TGG | + | chr1.3:47200076-47200095 | MS.gene073815:intron | 40.0% |
| ! | GTTTGAAGCCCATCGAATAT+CGG | + | chr1.3:47198040-47198059 | MS.gene073815:CDS | 40.0% |
| ! | TACCCAAACCAGAATGGATT+TGG | - | chr1.3:47197847-47197866 | None:intergenic | 40.0% |
| ! | TAGCTTCTGGGGAAAACTAA+AGG | - | chr1.3:47198801-47198820 | None:intergenic | 40.0% |
| ! | TGACCAAATCCATTCTGGTT+TGG | + | chr1.3:47197841-47197860 | MS.gene073815:CDS | 40.0% |
| ! | TTACTTGAAGTTTCGGCTTG+CGG | - | chr1.3:47197818-47197837 | None:intergenic | 40.0% |
| ! | TTGGCCTAATCCTTTTCGAA+GGG | + | chr1.3:47198283-47198302 | MS.gene073815:CDS | 40.0% |
| ! | TTTGGCCTAATCCTTTTCGA+AGG | + | chr1.3:47198282-47198301 | MS.gene073815:CDS | 40.0% |
| !! | AAGGCTTTTCTGTGCCATTA+AGG | + | chr1.3:47198961-47198980 | MS.gene073815:CDS | 40.0% |
| !! | AATTTTCCACTTGCTTTGGG+GGG | + | chr1.3:47199631-47199650 | MS.gene073815:intron | 40.0% |
| !! | CCCTACAAAACTGGTTTGTA+AGG | - | chr1.3:47200247-47200266 | None:intergenic | 40.0% |
| !! | GACCAAATCCATTCTGGTTT+GGG | + | chr1.3:47197842-47197861 | MS.gene073815:CDS | 40.0% |
| !! | GTACATTTAGAAGTACCCCT+TGG | + | chr1.3:47196466-47196485 | MS.gene073815:CDS | 40.0% |
| !! | GTATTTCTAGATTCCGAGTC+TGG | + | chr1.3:47198350-47198369 | MS.gene073815:CDS | 40.0% |
| !! | TGAAGTCCTGATTCTGAAGT+TGG | - | chr1.3:47197608-47197627 | None:intergenic | 40.0% |
| !! | TTTCCTTCACTTTTCCGAGA+AGG | + | chr1.3:47199557-47199576 | MS.gene073815:CDS | 40.0% |
| !!! | AAGGGTTTTAGGAACACAAC+AGG | + | chr1.3:47198517-47198536 | MS.gene073815:CDS | 40.0% |
| !!! | TTGTATTTTTGGTCCCCGTT+CGG | + | chr1.3:47200383-47200402 | MS.gene073815:intron | 40.0% |
| AACTCCAACATCGAGTACTC+AGG | + | chr1.3:47198388-47198407 | MS.gene073815:CDS | 45.0% | |
| AAGAGATGCTAGTTCGTCAC+TGG | + | chr1.3:47197280-47197299 | MS.gene073815:CDS | 45.0% | |
| AAGCATATCTCATCCAACGC+CGG | - | chr1.3:47200191-47200210 | None:intergenic | 45.0% | |
| AATAGTCCTGCTTCTTCTGG+TGG | + | chr1.3:47197572-47197591 | MS.gene073815:CDS | 45.0% | |
| AATCCTCTGCCGATATTCGA+TGG | - | chr1.3:47198052-47198071 | None:intergenic | 45.0% | |
| ACATCAACAGCACCACCAAA+TGG | - | chr1.3:47196423-47196442 | None:intergenic | 45.0% | |
| ACCCCTTGGTATGTTAGGTT+TGG | + | chr1.3:47196480-47196499 | MS.gene073815:CDS | 45.0% | |
| ACTCCAACATCGAGTACTCA+GGG | + | chr1.3:47198389-47198408 | MS.gene073815:CDS | 45.0% | |
| ACTTAAGGCAGGTATGGGTT+TGG | + | chr1.3:47198001-47198020 | MS.gene073815:CDS | 45.0% | |
| AGAAGCAGGACTATTTGTGG+AGG | - | chr1.3:47197567-47197586 | None:intergenic | 45.0% | |
| AGATTGGACACAATCTGGTG+TGG | + | chr1.3:47198937-47198956 | MS.gene073815:CDS | 45.0% | |
| AGTTCCTGGTCAAATATGCC+TGG | - | chr1.3:47199395-47199414 | None:intergenic | 45.0% | |
| ATCCTCTGCCGATATTCGAT+GGG | - | chr1.3:47198051-47198070 | None:intergenic | 45.0% | |
| ATTGCATCTTTCGGCTCAAC+AGG | - | chr1.3:47198200-47198219 | None:intergenic | 45.0% | |
| CAATGCGACACCGATACTAA+TGG | + | chr1.3:47197128-47197147 | MS.gene073815:CDS | 45.0% | |
| CAGCGACTGATGATAAATGG+AGG | + | chr1.3:47199782-47199801 | MS.gene073815:intron | 45.0% | |
| CAGGTTAAGTAGGAAGTTCC+TGG | - | chr1.3:47199409-47199428 | None:intergenic | 45.0% | |
| CCATCGGGTGAAATAACAAC+AGG | - | chr1.3:47199533-47199552 | None:intergenic | 45.0% | |
| CCTCTGTGGTCATGAACTTA+AGG | + | chr1.3:47197986-47198005 | MS.gene073815:CDS | 45.0% | |
| CCTTAAGTTCATGACCACAG+AGG | - | chr1.3:47197989-47198008 | None:intergenic | 45.0% | |
| CTCCATTTATCATCAGTCGC+TGG | - | chr1.3:47199784-47199803 | None:intergenic | 45.0% | |
| CTTATCACTTCCATCCGAAC+GGG | - | chr1.3:47200400-47200419 | None:intergenic | 45.0% | |
| CTTCACAAAATAAGCCTCCC+CGG | - | chr1.3:47196598-47196617 | None:intergenic | 45.0% | |
| GAGGTTGAGAAGGATTCATC+AGG | + | chr1.3:47197635-47197654 | MS.gene073815:CDS | 45.0% | |
| GATGTACTTGACGTGGGAAA+AGG | + | chr1.3:47198130-47198149 | MS.gene073815:CDS | 45.0% | |
| GCACCACCAAATGGATGAAA+AGG | - | chr1.3:47196414-47196433 | None:intergenic | 45.0% | |
| GCGCACTCAGAAACAATAGT+TGG | - | chr1.3:47199362-47199381 | None:intergenic | 45.0% | |
| GCTTCGGTTGAAAGATGAAG+AGG | + | chr1.3:47196728-47196747 | MS.gene073815:CDS | 45.0% | |
| GGACAGTTCATGCCTTTAGT+TGG | + | chr1.3:47198911-47198930 | MS.gene073815:CDS | 45.0% | |
| GGCAAAGATTGGACACAATC+TGG | + | chr1.3:47198932-47198951 | MS.gene073815:CDS | 45.0% | |
| GTCTTAACACACACCCCTAA+AGG | - | chr1.3:47200167-47200186 | None:intergenic | 45.0% | |
| GTGGAAACATGTCATTGACG+AGG | - | chr1.3:47200833-47200852 | None:intergenic | 45.0% | |
| TCACCTTCTCGGAAAAGTGA+AGG | - | chr1.3:47199563-47199582 | None:intergenic | 45.0% | |
| TCCAGATGTCCAGTCCTTTA+GGG | + | chr1.3:47200150-47200169 | MS.gene073815:intron | 45.0% | |
| TCCATTGCCTTCGCATATGT+CGG | - | chr1.3:47197027-47197046 | None:intergenic | 45.0% | |
| TGAGTACTCGATGTTGGAGT+TGG | - | chr1.3:47198389-47198408 | None:intergenic | 45.0% | |
| TGATTGTTGATCACCATCCC+TGG | - | chr1.3:47198237-47198256 | None:intergenic | 45.0% | |
| TGCAGGAAGACTACAACTCA+TGG | + | chr1.3:47200960-47200979 | MS.gene073815:intron | 45.0% | |
| TGGTTATGGTTGTACCGCTT+TGG | + | chr1.3:47197148-47197167 | MS.gene073815:CDS | 45.0% | |
| TGTGGTCATGAACTTAAGGC+AGG | + | chr1.3:47197990-47198009 | MS.gene073815:CDS | 45.0% | |
| TTATCACTTCCATCCGAACG+GGG | - | chr1.3:47200399-47200418 | None:intergenic | 45.0% | |
| TTCTCATCCAGAGATGGTCT+TGG | + | chr1.3:47196893-47196912 | MS.gene073815:CDS | 45.0% | |
| TTCTCGAATTTCGACCTCCA+GGG | - | chr1.3:47197228-47197247 | None:intergenic | 45.0% | |
| TTCTGCTCTGATTCCGAGAT+AGG | - | chr1.3:47196948-47196967 | None:intergenic | 45.0% | |
| TTGCCAAATCCCGCATAGAA+TGG | - | chr1.3:47200595-47200614 | None:intergenic | 45.0% | |
| TTGTCCAGGCATATTTGACC+AGG | + | chr1.3:47199388-47199407 | MS.gene073815:CDS | 45.0% | |
| ! | ACCCCTTTTCATCCATTTGG+TGG | + | chr1.3:47196408-47196427 | MS.gene073815:CDS | 45.0% |
| ! | ATGAAGAGGATTCGTCGGTT+GGG | + | chr1.3:47196742-47196761 | MS.gene073815:CDS | 45.0% |
| ! | GAAGTACCCCTTGGTATGTT+AGG | + | chr1.3:47196475-47196494 | MS.gene073815:CDS | 45.0% |
| ! | GCATCATTTAGTTGGTGCCT+GGG | - | chr1.3:47200742-47200761 | None:intergenic | 45.0% |
| ! | GCTACCCCTTTTCATCCATT+TGG | + | chr1.3:47196405-47196424 | MS.gene073815:CDS | 45.0% |
| ! | GGATTTTGCAAACTCTGCAC+CGG | + | chr1.3:47198067-47198086 | MS.gene073815:CDS | 45.0% |
| ! | GGCAATGGAGAGTTTAGTTC+CGG | + | chr1.3:47197038-47197057 | MS.gene073815:CDS | 45.0% |
| ! | GTATCTTGATAATTCCGGGG+AGG | + | chr1.3:47196581-47196600 | MS.gene073815:CDS | 45.0% |
| ! | TGCATCATTTAGTTGGTGCC+TGG | - | chr1.3:47200743-47200762 | None:intergenic | 45.0% |
| !! | ATGGTCTTGGTGAGTGTTGA+TGG | + | chr1.3:47196906-47196925 | MS.gene073815:CDS | 45.0% |
| !! | CCTGTTGTTATTTCACCCGA+TGG | + | chr1.3:47199530-47199549 | MS.gene073815:CDS | 45.0% |
| !! | GTTCTAGGAATGGCTGCATT+TGG | + | chr1.3:47198164-47198183 | MS.gene073815:CDS | 45.0% |
| !! | TCAAAAGTGCCTCACCTTCT+CGG | - | chr1.3:47199574-47199593 | None:intergenic | 45.0% |
| !! | TGCTCCTCTTGTTCTAGGAA+TGG | + | chr1.3:47198154-47198173 | MS.gene073815:CDS | 45.0% |
| !! | TTCACTTTTCCGAGAAGGTG+AGG | + | chr1.3:47199562-47199581 | MS.gene073815:intron | 45.0% |
| !!! | GGAGGCTTATTTTGTGAAGG+AGG | + | chr1.3:47196599-47196618 | MS.gene073815:CDS | 45.0% |
| !!! | GGCTTATTTTGTGAAGGAGG+CGG | + | chr1.3:47196602-47196621 | MS.gene073815:CDS | 45.0% |
| !!! | ATAAAAATTTTAAAATTCTT+CGG | - | chr1.3:47200930-47200949 | None:intergenic | 5.0% |
| AACACACACCCCTAAAGGAC+TGG | - | chr1.3:47200162-47200181 | None:intergenic | 50.0% | |
| AACTTTGAGTGGGGCCAAAG+CGG | - | chr1.3:47197165-47197184 | None:intergenic | 50.0% | |
| AAGGAGGCGGATGAGGATAA+AGG | + | chr1.3:47196615-47196634 | MS.gene073815:CDS | 50.0% | |
| AAGGCTGCTCCTCTTGTTCT+AGG | + | chr1.3:47198149-47198168 | MS.gene073815:CDS | 50.0% | |
| ACACTCACCAAGACCATCTC+TGG | - | chr1.3:47196903-47196922 | None:intergenic | 50.0% | |
| ACCAACTTCTTTGGTCGAGC+AGG | + | chr1.3:47200851-47200870 | MS.gene073815:CDS | 50.0% | |
| ACCGACATATGCGAAGGCAA+TGG | + | chr1.3:47197023-47197042 | MS.gene073815:CDS | 50.0% | |
| ACCTGCTCGACCAAAGAAGT+TGG | - | chr1.3:47200855-47200874 | None:intergenic | 50.0% | |
| AGATGCTAGTTCGTCACTGG+AGG | + | chr1.3:47197283-47197302 | MS.gene073815:CDS | 50.0% | |
| AGGAGGCGGATGAGGATAAA+GGG | + | chr1.3:47196616-47196635 | MS.gene073815:CDS | 50.0% | |
| ATTTCATCTAGGTCCGGCTG+AGG | + | chr1.3:47196998-47197017 | MS.gene073815:CDS | 50.0% | |
| CCAGATGTCCAGTCCTTTAG+GGG | + | chr1.3:47200151-47200170 | MS.gene073815:intron | 50.0% | |
| CCATCCCTGGAATATTCCAC+AGG | - | chr1.3:47198224-47198243 | None:intergenic | 50.0% | |
| CCTGTGGAATATTCCAGGGA+TGG | + | chr1.3:47198221-47198240 | MS.gene073815:CDS | 50.0% | |
| CTCCAGATGTCCAGTCCTTT+AGG | + | chr1.3:47200149-47200168 | MS.gene073815:intron | 50.0% | |
| CTCGGAATCAGAGCAGAATG+AGG | + | chr1.3:47196950-47196969 | MS.gene073815:CDS | 50.0% | |
| CTTCTCGAATTTCGACCTCC+AGG | - | chr1.3:47197229-47197248 | None:intergenic | 50.0% | |
| GATCCCTGAGTACTCGATGT+TGG | - | chr1.3:47198395-47198414 | None:intergenic | 50.0% | |
| GATGAAGAGGATTCGTCGGT+TGG | + | chr1.3:47196741-47196760 | MS.gene073815:CDS | 50.0% | |
| GATTCCGTCCTTTGAATCCG+AGG | - | chr1.3:47196768-47196787 | None:intergenic | 50.0% | |
| GCAGCCATTCCTAGAACAAG+AGG | - | chr1.3:47198161-47198180 | None:intergenic | 50.0% | |
| GCCGAAAGATGCAATTCCTG+TGG | + | chr1.3:47198205-47198224 | MS.gene073815:CDS | 50.0% | |
| GCCGGACCTAGATGAAATTG+AGG | - | chr1.3:47196996-47197015 | None:intergenic | 50.0% | |
| GGCCAGCGACTGATGATAAA+TGG | + | chr1.3:47199779-47199798 | MS.gene073815:intron | 50.0% | |
| TAGTTCCGGCGAAACTGCTT+GGG | + | chr1.3:47197052-47197071 | MS.gene073815:CDS | 50.0% | |
| TCGAGAAGATCTTTCGCAGC+AGG | + | chr1.3:47197241-47197260 | MS.gene073815:CDS | 50.0% | |
| TGCTCGACCAAAGAAGTTGG+TGG | - | chr1.3:47200852-47200871 | None:intergenic | 50.0% | |
| TTAGTTCCGGCGAAACTGCT+TGG | + | chr1.3:47197051-47197070 | MS.gene073815:CDS | 50.0% | |
| TTATGGCCACCAGAAGAAGC+AGG | - | chr1.3:47197581-47197600 | None:intergenic | 50.0% | |
| ! | AGGGGTGTGTGTTAAGACTC+CGG | + | chr1.3:47200169-47200188 | MS.gene073815:intron | 50.0% |
| ! | TTTTGTGAAGGAGGCGGATG+AGG | + | chr1.3:47196608-47196627 | MS.gene073815:CDS | 50.0% |
| !! | AGAGAATTCTGTCGACTCGC+AGG | + | chr1.3:47196869-47196888 | MS.gene073815:CDS | 50.0% |
| !! | AGTATCGGTGTCGCATTGTC+TGG | - | chr1.3:47197126-47197145 | None:intergenic | 50.0% |
| !! | CATTCTGGTTTGGGTAAGCC+CGG | + | chr1.3:47197851-47197870 | MS.gene073815:CDS | 50.0% |
| !! | GAGAATTCTGTCGACTCGCA+GGG | + | chr1.3:47196870-47196889 | MS.gene073815:CDS | 50.0% |
| !! | GTATCGGTGTCGCATTGTCT+GGG | - | chr1.3:47197125-47197144 | None:intergenic | 50.0% |
| !! | TTTCGGATTCTGGGGTGCTT+CGG | + | chr1.3:47196712-47196731 | MS.gene073815:CDS | 50.0% |
| !!! | ATTTTTGGTCCCCGTTCGGA+TGG | + | chr1.3:47200387-47200406 | MS.gene073815:intron | 50.0% |
| !!! | CGGGGAGGCTTATTTTGTGA+AGG | + | chr1.3:47196596-47196615 | MS.gene073815:CDS | 50.0% |
| AGCCCATCGAATATCGGCAG+AGG | + | chr1.3:47198046-47198065 | MS.gene073815:CDS | 55.0% | |
| CAAAGTCTCCATCTGCGTCC+AGG | - | chr1.3:47198266-47198285 | None:intergenic | 55.0% | |
| CATATGTCGGTCTCCTCAGC+CGG | - | chr1.3:47197014-47197033 | None:intergenic | 55.0% | |
| CCCCTAAAGGACTGGACATC+TGG | - | chr1.3:47200154-47200173 | None:intergenic | 55.0% | |
| CGGGCTTACCCAAACCAGAA+TGG | - | chr1.3:47197853-47197872 | None:intergenic | 55.0% | |
| CTGGACGCAGATGGAGACTT+TGG | + | chr1.3:47198264-47198283 | MS.gene073815:CDS | 55.0% | |
| CTTCTCAGCACAGGGCTTAC+CGG | - | chr1.3:47197873-47197892 | None:intergenic | 55.0% | |
| GAAGATCTTTCGCAGCAGGC+TGG | + | chr1.3:47197245-47197264 | MS.gene073815:CDS | 55.0% | |
| GAGGAGACCGACATATGCGA+AGG | + | chr1.3:47197017-47197036 | MS.gene073815:CDS | 55.0% | |
| GATCAACAATCACCCTCGCC+TGG | + | chr1.3:47198245-47198264 | MS.gene073815:CDS | 55.0% | |
| GCAGGGTTCTCATCCAGAGA+TGG | + | chr1.3:47196887-47196906 | MS.gene073815:CDS | 55.0% | |
| GGACACAATCTGGTGTGGCA+AGG | + | chr1.3:47198942-47198961 | MS.gene073815:CDS | 55.0% | |
| GGAGGCGGATGAGGATAAAG+GGG | + | chr1.3:47196617-47196636 | MS.gene073815:CDS | 55.0% | |
| GGATTGGAGATCTCCCTCTG+TGG | + | chr1.3:47197972-47197991 | MS.gene073815:intron | 55.0% | |
| GTGTGTTAAGACTCCGGCGT+TGG | + | chr1.3:47200175-47200194 | MS.gene073815:intron | 55.0% | |
| TGGGCCTCGGATTCAAAGGA+CGG | + | chr1.3:47196761-47196780 | MS.gene073815:CDS | 55.0% | |
| TTCTCAGCACAGGGCTTACC+GGG | - | chr1.3:47197872-47197891 | None:intergenic | 55.0% | |
| ! | ATGGGTTTGGTAGCTGCTGC+TGG | + | chr1.3:47198014-47198033 | MS.gene073815:CDS | 55.0% |
| !! | TCCACTTGCTTTGGGGGGTA+GGG | + | chr1.3:47199636-47199655 | MS.gene073815:intron | 55.0% |
| !! | TTCCACTTGCTTTGGGGGGT+AGG | + | chr1.3:47199635-47199654 | MS.gene073815:intron | 55.0% |
| ACCCTACCCCCCAAAGCAAG+TGG | - | chr1.3:47199640-47199659 | None:intergenic | 60.0% | |
| CGGTTGGGCCTCGGATTCAA+AGG | + | chr1.3:47196757-47196776 | MS.gene073815:CDS | 60.0% | |
| GAGTGCGCGTGCAATTGTCC+AGG | + | chr1.3:47199374-47199393 | MS.gene073815:CDS | 60.0% | |
| ! | AGGATTCGTCGGTTGGGCCT+CGG | + | chr1.3:47196748-47196767 | MS.gene073815:CDS | 60.0% |
| AGCGGCCCAAGCAGTTTCGC+CGG | - | chr1.3:47197060-47197079 | None:intergenic | 65.0% | |
| CTCCATCTGCGTCCAGGCGA+GGG | - | chr1.3:47198260-47198279 | None:intergenic | 65.0% | |
| TCTCCATCTGCGTCCAGGCG+AGG | - | chr1.3:47198261-47198280 | None:intergenic | 65.0% | |
| CACCCTCGCCTGGACGCAGA+TGG | + | chr1.3:47198255-47198274 | MS.gene073815:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 47196351 | 47201018 | 47196351 | ID=MS.gene073815 |
| chr1.3 | mRNA | 47196351 | 47201018 | 47196351 | ID=MS.gene073815.t1;Parent=MS.gene073815 |
| chr1.3 | exon | 47196351 | 47197872 | 47196351 | ID=MS.gene073815.t1.exon1;Parent=MS.gene073815.t1 |
| chr1.3 | CDS | 47196351 | 47197872 | 47196351 | ID=cds.MS.gene073815.t1;Parent=MS.gene073815.t1 |
| chr1.3 | exon | 47197973 | 47198538 | 47197973 | ID=MS.gene073815.t1.exon2;Parent=MS.gene073815.t1 |
| chr1.3 | CDS | 47197973 | 47198538 | 47197973 | ID=cds.MS.gene073815.t1;Parent=MS.gene073815.t1 |
| chr1.3 | exon | 47198637 | 47198710 | 47198637 | ID=MS.gene073815.t1.exon3;Parent=MS.gene073815.t1 |
| chr1.3 | CDS | 47198637 | 47198710 | 47198637 | ID=cds.MS.gene073815.t1;Parent=MS.gene073815.t1 |
| chr1.3 | exon | 47198898 | 47198982 | 47198898 | ID=MS.gene073815.t1.exon4;Parent=MS.gene073815.t1 |
| chr1.3 | CDS | 47198898 | 47198982 | 47198898 | ID=cds.MS.gene073815.t1;Parent=MS.gene073815.t1 |
| chr1.3 | exon | 47199348 | 47199434 | 47199348 | ID=MS.gene073815.t1.exon5;Parent=MS.gene073815.t1 |
| chr1.3 | CDS | 47199348 | 47199434 | 47199348 | ID=cds.MS.gene073815.t1;Parent=MS.gene073815.t1 |
| chr1.3 | exon | 47199506 | 47199578 | 47199506 | ID=MS.gene073815.t1.exon6;Parent=MS.gene073815.t1 |
| chr1.3 | CDS | 47199506 | 47199578 | 47199506 | ID=cds.MS.gene073815.t1;Parent=MS.gene073815.t1 |
| chr1.3 | exon | 47200413 | 47200456 | 47200413 | ID=MS.gene073815.t1.exon7;Parent=MS.gene073815.t1 |
| chr1.3 | CDS | 47200413 | 47200456 | 47200413 | ID=cds.MS.gene073815.t1;Parent=MS.gene073815.t1 |
| chr1.3 | exon | 47200559 | 47200687 | 47200559 | ID=MS.gene073815.t1.exon8;Parent=MS.gene073815.t1 |
| chr1.3 | CDS | 47200559 | 47200687 | 47200559 | ID=cds.MS.gene073815.t1;Parent=MS.gene073815.t1 |
| chr1.3 | exon | 47200774 | 47200872 | 47200774 | ID=MS.gene073815.t1.exon9;Parent=MS.gene073815.t1 |
| chr1.3 | CDS | 47200774 | 47200872 | 47200774 | ID=cds.MS.gene073815.t1;Parent=MS.gene073815.t1 |
| chr1.3 | exon | 47200965 | 47201018 | 47200965 | ID=MS.gene073815.t1.exon10;Parent=MS.gene073815.t1 |
| chr1.3 | CDS | 47200965 | 47201018 | 47200965 | ID=cds.MS.gene073815.t1;Parent=MS.gene073815.t1 |
| Gene Sequence |
| Protein sequence |
