AlfalfaGEDB | MS.gene073878

M. sativa cultivar XinJiangDaYe / MS.gene073878

KEGG: -
GO: GO:0003674 GO:0003676 GO:0005488 GO:0008270 GO:0043167 GO:0043169 GO:0046872 GO:0046914 GO:0097159 GO:1901363
PFAM: PF13917.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene073878.t1	AFK37246.1	98.6	141	2	0	1	141	1	141	1.20E-72	283.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene073878.t1	Q84Y18	62.5	128	45	2	1	128	1	125	1.5e-37	158.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene073878.t1	B7FHQ7	98.6	141	2	0	1	141	1	141	9.0e-73	283.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049411	MS.gene073878	0.829517	4.92E-55	-1.69E-46
MS.gene054004	MS.gene073878	0.821515	3.88E-53	-1.69E-46
MS.gene054638	MS.gene073878	-0.800517	1.39E-48	-1.69E-46
MS.gene055339	MS.gene073878	0.806937	6.45E-50	-1.69E-46
MS.gene059802	MS.gene073878	0.864431	1.22E-64	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene073878.t1	MTR_4g036620	79.293	198	24	3	116	313	1	181	2.10e-40	140
MS.gene073878.t1	MTR_4g036620	85.938	128	16	1	186	313	47	172	1.61e-27	106

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene073878.t1	AT2G28910	60.714	168	60	3	1	168	1	162	1.49e-53	179
MS.gene073878.t1	AT2G28910	60.714	168	60	3	1	168	1	162	1.49e-53	179
MS.gene073878.t1	AT2G28910	60.714	168	60	3	1	168	1	162	1.49e-53	179

Find 96 sgRNAs with CRISPR-Local

Find 100 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCATCCTTGTCATCCTTATT+AGG	0.271429	1.3:+26523180	None:intergenic
ACCATGGAGACGATGATTAA+AGG	0.292874	1.3:-26522336	None:intergenic
TGACCCTTATGCACCTAATA+AGG	0.299489	1.3:-26523193	MS.gene073878:CDS
TTCGCATGCCTGCGAACAAC+AGG	0.319189	1.3:-26523272	MS.gene073878:CDS
AAGGGCTGAGAAGGTGGATA+AGG	0.352316	1.3:-26522908	MS.gene073878:CDS
TCATCCTTATTAGGTGCATA+AGG	0.362970	1.3:+26523189	None:intergenic
TCTGCATCGGGCCCTGCATT+TGG	0.368781	1.3:+26523144	None:intergenic
TCTGCCATATGCCATGGGTT+TGG	0.371612	1.3:+26523229	None:intergenic
ATCATCAACTGACAGTGATT+CGG	0.382705	1.3:-26522425	MS.gene073878:CDS
TCATCAACTGACAGTGATTC+GGG	0.386672	1.3:-26522424	MS.gene073878:CDS
GGACACATCCACTTCAGAAT+TGG	0.389713	1.3:+26523074	None:intergenic
AGAGCTATTGCTAAAAGGTC+TGG	0.393009	1.3:-26522808	MS.gene073878:CDS
TTGAGAGAGCTATTGCTAAA+AGG	0.406535	1.3:-26522813	MS.gene073878:CDS
CAGATGACAGTGATGAATAT+AGG	0.408636	1.3:-26522567	MS.gene073878:CDS
AGGGCTGAGAAGGTGGATAA+GGG	0.420977	1.3:-26522907	MS.gene073878:CDS
GCAAGAAGTGTGGCCGTGTT+GGG	0.427555	1.3:-26523041	MS.gene073878:CDS
GCCATATGCCATGGGTTTGG+AGG	0.428657	1.3:+26523232	None:intergenic
CCCTCCAAACCCATGGCATA+TGG	0.432489	1.3:-26523233	MS.gene073878:CDS
AGAGGGAGCACAGGAGAAGC+AGG	0.433789	1.3:-26522603	MS.gene073878:CDS
ACACTTCTTGCAAGCTCCAC+GGG	0.452494	1.3:+26523053	None:intergenic
GCATATGCATTATCTGCATC+GGG	0.453124	1.3:+26523132	None:intergenic
AAAGGAGTGTTAAGACTAAG+AGG	0.453153	1.3:-26522675	MS.gene073878:CDS
GAGAGGTTCTTATAGAAAGA+AGG	0.453802	1.3:-26522767	MS.gene073878:CDS
GGCATATGCATTATCTGCAT+CGG	0.454933	1.3:+26523131	None:intergenic
CTATATTCATCACTGTCATC+TGG	0.458876	1.3:+26522568	None:intergenic
GTTGAAGGGAAGGGCTGAGA+AGG	0.461223	1.3:-26522917	MS.gene073878:CDS
CATCCTTATTAGGTGCATAA+GGG	0.464636	1.3:+26523190	None:intergenic
GTAGGAAGGAGAAGAGGAGA+AGG	0.468769	1.3:-26522528	MS.gene073878:CDS
AATGCATATGCCAGCTTCCA+AGG	0.472754	1.3:-26523120	MS.gene073878:CDS
TCCTTTAATCATCGTCTCCA+TGG	0.473522	1.3:+26522335	None:intergenic
GGTTCGAATGGATAGGTTGA+AGG	0.476783	1.3:-26522932	MS.gene073878:CDS
CTTCCTCCTCCTCCTTTCAA+CGG	0.477757	1.3:+26522630	None:intergenic
GAAGGGAAGGGCTGAGAAGG+TGG	0.480781	1.3:-26522914	MS.gene073878:CDS
TCTCAAAGTCAGCCAAATGC+AGG	0.481457	1.3:-26523156	MS.gene073878:CDS
GTCACTGGGGTTGGTTCGAA+TGG	0.482815	1.3:-26522944	MS.gene073878:CDS
ACTGACAGTGATTCGGGTGA+TGG	0.486358	1.3:-26522418	MS.gene073878:CDS
TAGCAAGCTGTAGAAGTCCT+TGG	0.490240	1.3:+26523103	None:intergenic
GGCATATGGCAGAGTGCCAT+TGG	0.492212	1.3:-26523219	MS.gene073878:CDS
ATGAATATAGGCACAAGAAA+AGG	0.494769	1.3:-26522555	MS.gene073878:CDS
TGGATATGATGGTTCAAGGA+AGG	0.495433	1.3:-26522398	MS.gene073878:CDS
CTGTAGAAGTCCTTGGAAGC+TGG	0.496883	1.3:+26523110	None:intergenic
TGCAAGAAGTGTGGCCGTGT+TGG	0.503344	1.3:-26523042	MS.gene073878:CDS
CAAAGATGACAAGGAGGAGA+AGG	0.506036	1.3:-26522983	MS.gene073878:CDS
GGAAGAGTAGGAAGGAGAAG+AGG	0.509538	1.3:-26522534	MS.gene073878:CDS
CTTAAGATGCCGGCTACAGC+AGG	0.510845	1.3:-26523300	None:intergenic
TTTGATGCAATGCAGTCACT+GGG	0.513459	1.3:-26522958	MS.gene073878:CDS
GAGCTATTGCTAAAAGGTCT+GGG	0.516028	1.3:-26522807	MS.gene073878:CDS
AGAGAGGTAGGGAAAAGAAA+AGG	0.516059	1.3:-26522693	MS.gene073878:CDS
TGCAATGCAGTCACTGGGGT+TGG	0.522857	1.3:-26522953	MS.gene073878:CDS
GTGATGGATATGATGGTTCA+AGG	0.523675	1.3:-26522402	MS.gene073878:CDS
CACACTTCTTGCAAGCTCCA+CGG	0.529458	1.3:+26523052	None:intergenic
GGATATGATGGTTCAAGGAA+GGG	0.532761	1.3:-26522397	MS.gene073878:CDS
ATGATGGTTCAAGGAAGGGT+AGG	0.535208	1.3:-26522393	MS.gene073878:CDS
TGGCACTCTGCCATATGCCA+TGG	0.538082	1.3:+26523223	None:intergenic
CCATATGCCATGGGTTTGGA+GGG	0.538353	1.3:+26523233	None:intergenic
TTTCAGATGATTCCGTTGAA+AGG	0.540800	1.3:-26522642	MS.gene073878:CDS
AAGAAAGTTAGTGAGAAGAG+AGG	0.546996	1.3:-26522784	MS.gene073878:CDS
TGATGGTTCAAGGAAGGGTA+GGG	0.549960	1.3:-26522392	MS.gene073878:CDS
CAGATGATTCCGTTGAAAGG+AGG	0.552094	1.3:-26522639	MS.gene073878:CDS
ATGATTCCGTTGAAAGGAGG+AGG	0.553371	1.3:-26522636	MS.gene073878:CDS
GGCACAAGAAAAGGAAGAGT+AGG	0.560603	1.3:-26522546	MS.gene073878:CDS
TGTTGAGAGCTCAGAAGAGG+AGG	0.561377	1.3:-26522878	MS.gene073878:CDS
CTGTGAACCCTGTTGTTCGC+AGG	0.564502	1.3:+26523264	None:intergenic
TGGGGTTGGTTCGAATGGAT+AGG	0.573310	1.3:-26522939	MS.gene073878:CDS
GAATGGATAGGTTGAAGGGA+AGG	0.573691	1.3:-26522927	MS.gene073878:CDS
GGCACTCTGCCATATGCCAT+GGG	0.575450	1.3:+26523224	None:intergenic
GTTCGAATGGATAGGTTGAA+GGG	0.583350	1.3:-26522931	MS.gene073878:CDS
GGGAGCACAGGAGAAGCAGG+AGG	0.583388	1.3:-26522600	MS.gene073878:CDS
GATGCCGGCTACAGCAGGTA+GGG	0.587055	1.3:-26523295	MS.gene073878:CDS
CAAGAAAAGGAAGAGTAGGA+AGG	0.588243	1.3:-26522542	MS.gene073878:CDS
CAATGTTGAGAGCTCAGAAG+AGG	0.592360	1.3:-26522881	MS.gene073878:CDS
AAGAGGAAGAGACGCCACCA+TGG	0.594257	1.3:-26522352	MS.gene073878:CDS
ATTCCGTTGAAAGGAGGAGG+AGG	0.595082	1.3:-26522633	MS.gene073878:CDS
TAAGATAACCAATTCTGAAG+TGG	0.602004	1.3:-26523082	MS.gene073878:CDS
ATGCCGCGAAGTAGAATCCT+CGG	0.602845	1.3:+26522471	None:intergenic
GATTCGGGTGATGGATATGA+TGG	0.604978	1.3:-26522409	MS.gene073878:CDS
CGAACCCTACCTGCTGTAGC+CGG	0.605040	1.3:+26523291	None:intergenic
AATGGATAGGTTGAAGGGAA+GGG	0.608564	1.3:-26522926	MS.gene073878:CDS
TGCATAAGGGTCATAGCCAA+TGG	0.608888	1.3:+26523203	None:intergenic
AGATGCCGGCTACAGCAGGT+AGG	0.611700	1.3:-26523296	MS.gene073878:CDS
TTCTGATTCTGAAACATCCG+AGG	0.615461	1.3:-26522488	MS.gene073878:CDS
CATCCGAGGATTCTACTTCG+CGG	0.620003	1.3:-26522474	MS.gene073878:CDS
GGAGCACAGGAGAAGCAGGA+GGG	0.620957	1.3:-26522599	MS.gene073878:CDS
CGTGGAGCTTGCAAGAAGTG+TGG	0.622651	1.3:-26523051	MS.gene073878:CDS
TGTTCTTGCACTGAAACTTG+AGG	0.624243	1.3:+26523016	None:intergenic
CTCAAAGTCAGCCAAATGCA+GGG	0.628373	1.3:-26523155	MS.gene073878:CDS
TGCACCTAATAAGGATGACA+AGG	0.631127	1.3:-26523184	MS.gene073878:CDS
AAGGAGTGTTAAGACTAAGA+GGG	0.642202	1.3:-26522674	MS.gene073878:CDS
AGTGCAGCCCTCCAAACCCA+TGG	0.642591	1.3:-26523240	MS.gene073878:CDS
GAAACTTGAGGTGCCCAACA+CGG	0.656694	1.3:+26523028	None:intergenic
TGTGAAAATCAAAGATGACA+AGG	0.663600	1.3:-26522992	MS.gene073878:CDS
TTTAATCATCGTCTCCATGG+TGG	0.666454	1.3:+26522338	None:intergenic
GAAAATCAAAGATGACAAGG+AGG	0.668843	1.3:-26522989	MS.gene073878:CDS
TCTGAAGTGGATGTGTCCCG+TGG	0.679307	1.3:-26523069	MS.gene073878:CDS
TCGCATGCCTGCGAACAACA+GGG	0.684833	1.3:-26523271	MS.gene073878:CDS
TTGATGCAATGCAGTCACTG+GGG	0.760393	1.3:-26522957	MS.gene073878:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATATAAAAAAATCAGAGAAG+AGG	-	chr1.3:26523264-26523283	MS.gene073878:CDS	20.0%
	AAAGAGAAAAAAGAGAGGTA+GGG	-	chr1.3:26522929-26522948	MS.gene073878:CDS	30.0%
	ATGAATATAGGCACAAGAAA+AGG	-	chr1.3:26523078-26523097	MS.gene073878:CDS	30.0%
	TGTGAAAATCAAAGATGACA+AGG	-	chr1.3:26522641-26522660	MS.gene073878:CDS	30.0%
!	TAAGATAACCAATTCTGAAG+TGG	-	chr1.3:26522551-26522570	MS.gene073878:CDS	30.0%
!!!	TACCTCTCTTTTTTCTCTTT+CGG	+	chr1.3:26522929-26522948	None:intergenic	30.0%
	AAGAAAGTTAGTGAGAAGAG+AGG	-	chr1.3:26522849-26522868	MS.gene073878:CDS	35.0%
	ATCATCAACTGACAGTGATT+CGG	-	chr1.3:26523208-26523227	MS.gene073878:CDS	35.0%
	CAGATGACAGTGATGAATAT+AGG	-	chr1.3:26523066-26523085	MS.gene073878:CDS	35.0%
	CATCCTTATTAGGTGCATAA+GGG	+	chr1.3:26522446-26522465	None:intergenic	35.0%
	CTATATTCATCACTGTCATC+TGG	+	chr1.3:26523068-26523087	None:intergenic	35.0%
	GAAAATCAAAGATGACAAGG+AGG	-	chr1.3:26522644-26522663	MS.gene073878:CDS	35.0%
	GAAAGAGAAAAAAGAGAGGT+AGG	-	chr1.3:26522928-26522947	MS.gene073878:CDS	35.0%
	GAGAGGTTCTTATAGAAAGA+AGG	-	chr1.3:26522866-26522885	MS.gene073878:CDS	35.0%
	TCATCCTTATTAGGTGCATA+AGG	+	chr1.3:26522447-26522466	None:intergenic	35.0%
	TTGAGAGAGCTATTGCTAAA+AGG	-	chr1.3:26522820-26522839	MS.gene073878:CDS	35.0%
	TTTCAGATGATTCCGTTGAA+AGG	-	chr1.3:26522991-26523010	MS.gene073878:CDS	35.0%
!!	AAAGGAGTGTTAAGACTAAG+AGG	-	chr1.3:26522958-26522977	MS.gene073878:CDS	35.0%
!!	AAGGAGTGTTAAGACTAAGA+GGG	-	chr1.3:26522959-26522978	MS.gene073878:CDS	35.0%
	AGAGAGGTAGGGAAAAGAAA+AGG	-	chr1.3:26522940-26522959	MS.gene073878:CDS	40.0%
	AGAGCTATTGCTAAAAGGTC+TGG	-	chr1.3:26522825-26522844	MS.gene073878:CDS	40.0%
	CAAGAAAAGGAAGAGTAGGA+AGG	-	chr1.3:26523091-26523110	MS.gene073878:CDS	40.0%
	GACCGAAAGAGAAAAAAGAG+AGG	-	chr1.3:26522924-26522943	MS.gene073878:CDS	40.0%
	GAGCTATTGCTAAAAGGTCT+GGG	-	chr1.3:26522826-26522845	MS.gene073878:CDS	40.0%
	GCATATGCATTATCTGCATC+GGG	+	chr1.3:26522504-26522523	None:intergenic	40.0%
	GCATCCTTGTCATCCTTATT+AGG	+	chr1.3:26522456-26522475	None:intergenic	40.0%
	GGATATGATGGTTCAAGGAA+GGG	-	chr1.3:26523236-26523255	MS.gene073878:CDS	40.0%
	GGCATATGCATTATCTGCAT+CGG	+	chr1.3:26522505-26522524	None:intergenic	40.0%
	TCATCAACTGACAGTGATTC+GGG	-	chr1.3:26523209-26523228	MS.gene073878:CDS	40.0%
	TGACCCTTATGCACCTAATA+AGG	-	chr1.3:26522440-26522459	MS.gene073878:CDS	40.0%
	TGCACCTAATAAGGATGACA+AGG	-	chr1.3:26522449-26522468	MS.gene073878:CDS	40.0%
	TGGATATGATGGTTCAAGGA+AGG	-	chr1.3:26523235-26523254	MS.gene073878:CDS	40.0%
	TGTTCTTGCACTGAAACTTG+AGG	+	chr1.3:26522620-26522639	None:intergenic	40.0%
	TTTGATGCAATGCAGTCACT+GGG	-	chr1.3:26522675-26522694	MS.gene073878:CDS	40.0%
!	AATGGATAGGTTGAAGGGAA+GGG	-	chr1.3:26522707-26522726	MS.gene073878:CDS	40.0%
!	GTTCGAATGGATAGGTTGAA+GGG	-	chr1.3:26522702-26522721	MS.gene073878:CDS	40.0%
!	TTTTGATGCAATGCAGTCAC+TGG	-	chr1.3:26522674-26522693	MS.gene073878:CDS	40.0%
!!	GTGATGGATATGATGGTTCA+AGG	-	chr1.3:26523231-26523250	MS.gene073878:CDS	40.0%
!!	TTCTGATTCTGAAACATCCG+AGG	-	chr1.3:26523145-26523164	MS.gene073878:CDS	40.0%
	AATGCATATGCCAGCTTCCA+AGG	-	chr1.3:26522513-26522532	MS.gene073878:CDS	45.0%
	ATGATGGTTCAAGGAAGGGT+AGG	-	chr1.3:26523240-26523259	MS.gene073878:CDS	45.0%
	ATGATTCCGTTGAAAGGAGG+AGG	-	chr1.3:26522997-26523016	MS.gene073878:CDS	45.0%
	CAAAGATGACAAGGAGGAGA+AGG	-	chr1.3:26522650-26522669	MS.gene073878:CDS	45.0%
	CAATGTTGAGAGCTCAGAAG+AGG	-	chr1.3:26522752-26522771	MS.gene073878:CDS	45.0%
	CAGATGATTCCGTTGAAAGG+AGG	-	chr1.3:26522994-26523013	MS.gene073878:CDS	45.0%
	CTCAAAGTCAGCCAAATGCA+GGG	-	chr1.3:26522478-26522497	MS.gene073878:CDS	45.0%
	GAGGAGGAGGAAGAAAAAGA+GGG	-	chr1.3:26523013-26523032	MS.gene073878:CDS	45.0%
	GGACACATCCACTTCAGAAT+TGG	+	chr1.3:26522562-26522581	None:intergenic	45.0%
	GGCACAAGAAAAGGAAGAGT+AGG	-	chr1.3:26523087-26523106	MS.gene073878:CDS	45.0%
	GGCATAAGCGAAAAAGCAAG+AGG	-	chr1.3:26523180-26523199	MS.gene073878:CDS	45.0%
	TAGCAAGCTGTAGAAGTCCT+TGG	+	chr1.3:26522533-26522552	None:intergenic	45.0%
	TCTCAAAGTCAGCCAAATGC+AGG	-	chr1.3:26522477-26522496	MS.gene073878:CDS	45.0%
	TGATGGTTCAAGGAAGGGTA+GGG	-	chr1.3:26523241-26523260	MS.gene073878:CDS	45.0%
	TGCATAAGGGTCATAGCCAA+TGG	+	chr1.3:26522433-26522452	None:intergenic	45.0%
	TTGATGCAATGCAGTCACTG+GGG	-	chr1.3:26522676-26522695	MS.gene073878:CDS	45.0%
!	GAATGGATAGGTTGAAGGGA+AGG	-	chr1.3:26522706-26522725	MS.gene073878:CDS	45.0%
!	GGTTCGAATGGATAGGTTGA+AGG	-	chr1.3:26522701-26522720	MS.gene073878:CDS	45.0%
!!	GATTCGGGTGATGGATATGA+TGG	-	chr1.3:26523224-26523243	MS.gene073878:CDS	45.0%
	AAGGGCTGAGAAGGTGGATA+AGG	-	chr1.3:26522725-26522744	MS.gene073878:CDS	50.0%
	ACACTTCTTGCAAGCTCCAC+GGG	+	chr1.3:26522583-26522602	None:intergenic	50.0%
	AGGGCTGAGAAGGTGGATAA+GGG	-	chr1.3:26522726-26522745	MS.gene073878:CDS	50.0%
	ATGCCGCGAAGTAGAATCCT+CGG	+	chr1.3:26523165-26523184	None:intergenic	50.0%
	ATTCCGTTGAAAGGAGGAGG+AGG	-	chr1.3:26523000-26523019	MS.gene073878:CDS	50.0%
	CACACTTCTTGCAAGCTCCA+CGG	+	chr1.3:26522584-26522603	None:intergenic	50.0%
	CATCCGAGGATTCTACTTCG+CGG	-	chr1.3:26523159-26523178	MS.gene073878:CDS	50.0%
	CCATATGCCATGGGTTTGGA+GGG	+	chr1.3:26522403-26522422	None:intergenic	50.0%
	CTGTAGAAGTCCTTGGAAGC+TGG	+	chr1.3:26522526-26522545	None:intergenic	50.0%
	CTTCCTCCTCCTCCTTTCAA+CGG	+	chr1.3:26523006-26523025	None:intergenic	50.0%
	GGAAGAGTAGGAAGGAGAAG+AGG	-	chr1.3:26523099-26523118	MS.gene073878:CDS	50.0%
	GGAGGAGGAGGAAGAAAAAG+AGG	-	chr1.3:26523012-26523031	MS.gene073878:CDS	50.0%
	GTAGGAAGGAGAAGAGGAGA+AGG	-	chr1.3:26523105-26523124	MS.gene073878:CDS	50.0%
	TCTGCCATATGCCATGGGTT+TGG	+	chr1.3:26522407-26522426	None:intergenic	50.0%
	TGTTGAGAGCTCAGAAGAGG+AGG	-	chr1.3:26522755-26522774	MS.gene073878:CDS	50.0%
!	ACTGACAGTGATTCGGGTGA+TGG	-	chr1.3:26523215-26523234	MS.gene073878:CDS	50.0%
!	GAAACTTGAGGTGCCCAACA+CGG	+	chr1.3:26522608-26522627	None:intergenic	50.0%
!	GGAAGAAAAAGAGGGAGCAC+AGG	-	chr1.3:26523021-26523040	MS.gene073878:CDS	50.0%
!!	TGGGGTTGGTTCGAATGGAT+AGG	-	chr1.3:26522694-26522713	MS.gene073878:CDS	50.0%
	AAGAGGAAGAGACGCCACCA+TGG	-	chr1.3:26523281-26523300	MS.gene073878:CDS	55.0%
	CCCTCCAAACCCATGGCATA+TGG	-	chr1.3:26522400-26522419	MS.gene073878:CDS	55.0%
	CGTGGAGCTTGCAAGAAGTG+TGG	-	chr1.3:26522582-26522601	MS.gene073878:CDS	55.0%
	CTGTGAACCCTGTTGTTCGC+AGG	+	chr1.3:26522372-26522391	None:intergenic	55.0%
	GCCATATGCCATGGGTTTGG+AGG	+	chr1.3:26522404-26522423	None:intergenic	55.0%
	GGCACTCTGCCATATGCCAT+GGG	+	chr1.3:26522412-26522431	None:intergenic	55.0%
	GTTGAAGGGAAGGGCTGAGA+AGG	-	chr1.3:26522716-26522735	MS.gene073878:CDS	55.0%
	TCGCATGCCTGCGAACAACA+GGG	-	chr1.3:26522362-26522381	MS.gene073878:CDS	55.0%
	TGCAATGCAGTCACTGGGGT+TGG	-	chr1.3:26522680-26522699	MS.gene073878:CDS	55.0%
	TGGCACTCTGCCATATGCCA+TGG	+	chr1.3:26522413-26522432	None:intergenic	55.0%
	TTCGCATGCCTGCGAACAAC+AGG	-	chr1.3:26522361-26522380	MS.gene073878:CDS	55.0%
!	GCAAGAAGTGTGGCCGTGTT+GGG	-	chr1.3:26522592-26522611	MS.gene073878:CDS	55.0%
!	GGCATATGGCAGAGTGCCAT+TGG	-	chr1.3:26522414-26522433	MS.gene073878:CDS	55.0%
!	TCTGAAGTGGATGTGTCCCG+TGG	-	chr1.3:26522564-26522583	MS.gene073878:CDS	55.0%
!	TGCAAGAAGTGTGGCCGTGT+TGG	-	chr1.3:26522591-26522610	MS.gene073878:CDS	55.0%
!!	GTCACTGGGGTTGGTTCGAA+TGG	-	chr1.3:26522689-26522708	MS.gene073878:CDS	55.0%
	AGTGCAGCCCTCCAAACCCA+TGG	-	chr1.3:26522393-26522412	MS.gene073878:CDS	60.0%
	CGAACCCTACCTGCTGTAGC+CGG	+	chr1.3:26522345-26522364	None:intergenic	60.0%
	GAAGGGAAGGGCTGAGAAGG+TGG	-	chr1.3:26522719-26522738	MS.gene073878:CDS	60.0%
	GGAGCACAGGAGAAGCAGGA+GGG	-	chr1.3:26523034-26523053	MS.gene073878:CDS	60.0%
	TCTGCATCGGGCCCTGCATT+TGG	+	chr1.3:26522492-26522511	None:intergenic	60.0%
!	AGAGGGAGCACAGGAGAAGC+AGG	-	chr1.3:26523030-26523049	MS.gene073878:CDS	60.0%
!	GGGAGCACAGGAGAAGCAGG+AGG	-	chr1.3:26523033-26523052	MS.gene073878:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.3	gene	26522339	26523316	26522339	ID=MS.gene073878
chr1.3	mRNA	26522339	26523316	26522339	ID=MS.gene073878.t1;Parent=MS.gene073878
chr1.3	exon	26522339	26523316	26522339	ID=MS.gene073878.t1.exon1;Parent=MS.gene073878.t1
chr1.3	CDS	26522339	26523316	26522339	ID=cds.MS.gene073878.t1;Parent=MS.gene073878.t1

Gene Sequence

>MS.gene073878

ATGCCGGCTACAGCAGGTAGGGTTCGCATGCCTGCGAACAACAGGGTTCACAGTAGTGCAGCCCTCCAAACCCATGGCATATGGCAGAGTGCCATTGGCTATGACCCTTATGCACCTAATAAGGATGACAAGGATGCTTCTCAAAGTCAGCCAAATGCAGGGCCCGATGCAGATAATGCATATGCCAGCTTCCAAGGACTTCTACAGCTTGCTAAGATAACCAATTCTGAAGTGGATGTGTCCCGTGGAGCTTGCAAGAAGTGTGGCCGTGTTGGGCACCTCAAGTTTCAGTGCAAGAACAATGTGAAAATCAAAGATGACAAGGAGGAGAAGGATTTTGATGCAATGCAGTCACTGGGGTTGGTTCGAATGGATAGGTTGAAGGGAAGGGCTGAGAAGGTGGATAAGGGAAGCAATGTTGAGAGCTCAGAAGAGGAGGAAGATGATAGTGAGAGTTCAGATTCTGAGATTGATTCAGAGATTGAGAGAGCTATTGCTAAAAGGTCTGGGAAGAAAGTTAGTGAGAAGAGAGGTTCTTATAGAAAGAAGGATGACTCAGATGATGATGAGTCAGACAAAGATTCTGACCGAAAGAGAAAAAAGAGAGGTAGGGAAAAGAAAAGGAGTGTTAAGACTAAGAGGGACGCTAGTGTTTCAGATGATTCCGTTGAAAGGAGGAGGAGGAAGAAAAAGAGGGAGCACAGGAGAAGCAGGAGGGACAAGTCTCCAGATGACAGTGATGAATATAGGCACAAGAAAAGGAAGAGTAGGAAGGAGAAGAGGAGAAGGAGAAGTCGTGTTTCAGATTCTGATTCTGAAACATCCGAGGATTCTACTTCGCGGCATAAGCGAAAAAGCAAGAGGACTTCATCATCAACTGACAGTGATTCGGGTGATGGATATGATGGTTCAAGGAAGGGTAGGGATATAAAAAAATCAGAGAAGAGGAAGAGACGCCACCATGGAGACGATGATTAA

Protein sequence

>MS.gene073878.t1

MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDKDASQSQPNAGPDADNAYASFQGLLQLAKITNSEVDVSRGACKKCGRVGHLKFQCKNNVKIKDDKEEKDFDAMQSLGLVRMDRLKGRAEKVDKGSNVESSEEEEDDSESSDSEIDSEIERAIAKRSGKKVSEKRGSYRKKDDSDDDESDKDSDRKRKKRGREKKRSVKTKRDASVSDDSVERRRRKKKREHRRSRRDKSPDDSDEYRHKKRKSRKEKRRRRSRVSDSDSETSEDSTSRHKRKSKRTSSSTDSDSGDGYDGSRKGRDIKKSEKRKRRHHGDDD