Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074193.t1 | PNX88321.1 | 93.1 | 160 | 11 | 0 | 1 | 160 | 1 | 160 | 1.40E-77 | 298.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074193.t1 | Q8LB81 | 65.8 | 158 | 54 | 0 | 3 | 160 | 132 | 289 | 9.0e-57 | 221.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074193.t1 | A0A2K3MC03 | 93.1 | 160 | 11 | 0 | 1 | 160 | 1 | 160 | 1.0e-77 | 298.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050586 | MS.gene074193 | 0.809418 | 1.91E-50 | -1.69E-46 |
| MS.gene051789 | MS.gene074193 | 0.821617 | 3.67E-53 | -1.69E-46 |
| MS.gene052142 | MS.gene074193 | 0.801666 | 8.08E-49 | -1.69E-46 |
| MS.gene052698 | MS.gene074193 | 0.800978 | 1.12E-48 | -1.69E-46 |
| MS.gene053074 | MS.gene074193 | 0.82986 | 4.06E-55 | -1.69E-46 |
| MS.gene05456 | MS.gene074193 | 0.832763 | 7.85E-56 | -1.69E-46 |
| MS.gene055359 | MS.gene074193 | 0.846927 | 1.60E-59 | -1.69E-46 |
| MS.gene058168 | MS.gene074193 | 0.805429 | 1.34E-49 | -1.69E-46 |
| MS.gene059006 | MS.gene074193 | 0.826775 | 2.25E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074193.t1 | MTR_6g021530 | 96.875 | 160 | 5 | 0 | 1 | 160 | 130 | 289 | 2.10e-111 | 321 |
| MS.gene074193.t1 | MTR_7g116570 | 68.125 | 160 | 51 | 0 | 1 | 160 | 134 | 293 | 1.59e-80 | 243 |
| MS.gene074193.t1 | MTR_7g008060 | 67.500 | 160 | 52 | 0 | 1 | 160 | 120 | 279 | 8.28e-77 | 233 |
| MS.gene074193.t1 | MTR_7g116520 | 66.875 | 160 | 53 | 0 | 1 | 160 | 134 | 293 | 2.61e-76 | 232 |
| MS.gene074193.t1 | MTR_1g079540 | 65.823 | 158 | 54 | 0 | 3 | 160 | 133 | 290 | 6.44e-74 | 226 |
| MS.gene074193.t1 | MTR_1g024890 | 65.190 | 158 | 55 | 0 | 3 | 160 | 134 | 291 | 3.68e-73 | 224 |
| MS.gene074193.t1 | MTR_7g116510 | 63.975 | 161 | 57 | 1 | 1 | 160 | 125 | 285 | 5.46e-73 | 223 |
| MS.gene074193.t1 | MTR_7g116500 | 63.291 | 158 | 58 | 0 | 3 | 160 | 135 | 292 | 5.76e-70 | 216 |
| MS.gene074193.t1 | MTR_4g019880 | 63.522 | 159 | 56 | 1 | 4 | 160 | 135 | 293 | 9.94e-68 | 210 |
| MS.gene074193.t1 | MTR_1g079530 | 60.265 | 151 | 60 | 0 | 1 | 151 | 129 | 279 | 4.21e-62 | 195 |
| MS.gene074193.t1 | MTR_1g069175 | 53.416 | 161 | 74 | 1 | 1 | 160 | 134 | 294 | 3.82e-59 | 188 |
| MS.gene074193.t1 | MTR_3g082830 | 35.404 | 161 | 101 | 2 | 1 | 160 | 138 | 296 | 1.84e-28 | 108 |
| MS.gene074193.t1 | MTR_5g084750 | 33.540 | 161 | 104 | 2 | 1 | 160 | 130 | 288 | 7.49e-28 | 106 |
| MS.gene074193.t1 | MTR_1g079590 | 59.211 | 76 | 31 | 0 | 1 | 76 | 131 | 206 | 7.64e-28 | 103 |
| MS.gene074193.t1 | MTR_5g078210 | 33.758 | 157 | 102 | 2 | 4 | 160 | 129 | 283 | 3.54e-27 | 103 |
| MS.gene074193.t1 | MTR_5g078210 | 33.758 | 157 | 102 | 2 | 4 | 160 | 129 | 283 | 5.82e-27 | 103 |
| MS.gene074193.t1 | MTR_5g084770 | 33.951 | 162 | 103 | 2 | 1 | 160 | 128 | 287 | 2.00e-25 | 99.8 |
| MS.gene074193.t1 | MTR_5g084790 | 33.333 | 162 | 103 | 3 | 1 | 160 | 132 | 290 | 3.51e-25 | 99.4 |
| MS.gene074193.t1 | MTR_3g023220 | 37.984 | 129 | 77 | 1 | 18 | 146 | 148 | 273 | 1.23e-24 | 97.8 |
| MS.gene074193.t1 | MTR_4g122200 | 34.014 | 147 | 95 | 2 | 1 | 145 | 133 | 279 | 7.79e-23 | 93.2 |
| MS.gene074193.t1 | MTR_5g074270 | 32.075 | 159 | 104 | 2 | 1 | 157 | 133 | 289 | 3.67e-22 | 91.3 |
| MS.gene074193.t1 | MTR_3g464730 | 32.099 | 162 | 106 | 3 | 1 | 160 | 128 | 287 | 5.16e-22 | 90.5 |
| MS.gene074193.t1 | MTR_8g087890 | 31.847 | 157 | 102 | 2 | 9 | 160 | 133 | 289 | 2.20e-21 | 89.0 |
| MS.gene074193.t1 | MTR_8g087870 | 31.081 | 148 | 101 | 1 | 1 | 147 | 127 | 274 | 2.24e-21 | 89.0 |
| MS.gene074193.t1 | MTR_2g100620 | 29.193 | 161 | 111 | 2 | 1 | 160 | 131 | 289 | 2.64e-20 | 85.9 |
| MS.gene074193.t1 | MTR_2g017925 | 34.559 | 136 | 87 | 2 | 13 | 146 | 40 | 175 | 3.40e-20 | 84.3 |
| MS.gene074193.t1 | MTR_3g435540 | 30.864 | 162 | 106 | 3 | 1 | 160 | 125 | 282 | 5.98e-20 | 85.1 |
| MS.gene074193.t1 | MTR_4g035353 | 26.708 | 161 | 117 | 1 | 1 | 160 | 130 | 290 | 7.49e-20 | 84.7 |
| MS.gene074193.t1 | MTR_3g024510 | 32.704 | 159 | 104 | 3 | 4 | 160 | 139 | 296 | 8.05e-20 | 84.7 |
| MS.gene074193.t1 | MTR_0127s0040 | 27.857 | 140 | 101 | 0 | 21 | 160 | 28 | 167 | 9.34e-20 | 82.8 |
| MS.gene074193.t1 | MTR_8g075230 | 30.435 | 161 | 103 | 3 | 4 | 160 | 139 | 294 | 1.04e-19 | 84.3 |
| MS.gene074193.t1 | MTR_2g017925 | 33.793 | 145 | 94 | 2 | 4 | 146 | 134 | 278 | 1.44e-19 | 84.0 |
| MS.gene074193.t1 | MTR_5g022640 | 30.435 | 161 | 103 | 3 | 4 | 160 | 147 | 302 | 2.66e-19 | 83.2 |
| MS.gene074193.t1 | MTR_2g017955 | 34.074 | 135 | 85 | 2 | 13 | 146 | 147 | 278 | 2.89e-19 | 83.2 |
| MS.gene074193.t1 | MTR_3g005650 | 30.137 | 146 | 100 | 2 | 3 | 148 | 129 | 272 | 4.04e-19 | 82.8 |
| MS.gene074193.t1 | MTR_8g079050 | 31.707 | 164 | 107 | 4 | 1 | 160 | 140 | 302 | 4.09e-19 | 82.8 |
| MS.gene074193.t1 | MTR_8g014910 | 27.778 | 162 | 112 | 3 | 1 | 160 | 132 | 290 | 4.36e-19 | 82.8 |
| MS.gene074193.t1 | MTR_8g075200 | 30.827 | 133 | 89 | 2 | 4 | 135 | 144 | 274 | 8.52e-19 | 82.0 |
| MS.gene074193.t1 | MTR_4g087985 | 34.906 | 106 | 67 | 1 | 3 | 108 | 138 | 241 | 1.65e-18 | 81.3 |
| MS.gene074193.t1 | MTR_8g075220 | 32.593 | 135 | 87 | 3 | 4 | 136 | 147 | 279 | 1.75e-18 | 81.3 |
| MS.gene074193.t1 | MTR_3g098270 | 28.125 | 160 | 112 | 2 | 3 | 160 | 138 | 296 | 2.96e-18 | 80.5 |
| MS.gene074193.t1 | MTR_2g017965 | 34.351 | 131 | 85 | 1 | 16 | 145 | 148 | 278 | 4.69e-18 | 80.1 |
| MS.gene074193.t1 | MTR_0565s0010 | 30.573 | 157 | 104 | 2 | 9 | 160 | 135 | 291 | 5.50e-18 | 79.7 |
| MS.gene074193.t1 | MTR_2g017875 | 29.861 | 144 | 100 | 1 | 4 | 146 | 137 | 280 | 5.87e-18 | 79.7 |
| MS.gene074193.t1 | MTR_3g114090 | 32.308 | 130 | 85 | 2 | 8 | 136 | 144 | 271 | 6.56e-18 | 79.3 |
| MS.gene074193.t1 | MTR_1g025780 | 33.333 | 135 | 80 | 4 | 4 | 134 | 144 | 272 | 1.25e-17 | 78.6 |
| MS.gene074193.t1 | MTR_5g022630 | 29.747 | 158 | 108 | 2 | 4 | 160 | 148 | 303 | 1.88e-17 | 78.2 |
| MS.gene074193.t1 | MTR_2g084585 | 31.852 | 135 | 89 | 2 | 3 | 136 | 132 | 264 | 2.34e-17 | 77.8 |
| MS.gene074193.t1 | MTR_1g025700 | 36.923 | 130 | 73 | 3 | 1 | 126 | 150 | 274 | 3.15e-17 | 77.8 |
| MS.gene074193.t1 | MTR_1g025680 | 28.481 | 158 | 110 | 2 | 4 | 160 | 138 | 293 | 5.85e-17 | 77.0 |
| MS.gene074193.t1 | MTR_2g015080 | 31.298 | 131 | 84 | 2 | 3 | 129 | 143 | 271 | 6.60e-17 | 76.6 |
| MS.gene074193.t1 | MTR_4g108690 | 30.625 | 160 | 105 | 3 | 3 | 160 | 131 | 286 | 2.12e-16 | 75.1 |
| MS.gene074193.t1 | MTR_4g056160 | 28.571 | 161 | 109 | 3 | 3 | 160 | 129 | 286 | 2.34e-16 | 75.1 |
| MS.gene074193.t1 | MTR_1g025760 | 29.710 | 138 | 89 | 3 | 4 | 137 | 183 | 316 | 2.88e-16 | 75.1 |
| MS.gene074193.t1 | MTR_4g056280 | 31.387 | 137 | 91 | 2 | 1 | 136 | 130 | 264 | 1.10e-15 | 73.2 |
| MS.gene074193.t1 | MTR_1g025720 | 30.709 | 127 | 85 | 2 | 1 | 126 | 137 | 261 | 1.16e-15 | 73.2 |
| MS.gene074193.t1 | MTR_3g005660 | 33.333 | 99 | 64 | 1 | 37 | 133 | 172 | 270 | 4.25e-15 | 71.6 |
| MS.gene074193.t1 | MTR_8g022810 | 28.025 | 157 | 104 | 3 | 8 | 160 | 145 | 296 | 5.09e-15 | 71.2 |
| MS.gene074193.t1 | MTR_3g114120 | 29.448 | 163 | 108 | 3 | 1 | 160 | 147 | 305 | 1.36e-14 | 70.1 |
| MS.gene074193.t1 | MTR_2g033920 | 29.787 | 141 | 97 | 2 | 4 | 142 | 136 | 276 | 2.77e-14 | 69.3 |
| MS.gene074193.t1 | MTR_2g033920 | 29.787 | 141 | 97 | 2 | 4 | 142 | 136 | 276 | 3.08e-14 | 68.9 |
| MS.gene074193.t1 | MTR_2g033930 | 29.012 | 162 | 105 | 4 | 4 | 160 | 133 | 289 | 3.48e-14 | 68.9 |
| MS.gene074193.t1 | MTR_3g021460 | 26.119 | 134 | 96 | 2 | 28 | 160 | 158 | 289 | 9.17e-14 | 67.8 |
| MS.gene074193.t1 | MTR_1g025910 | 35.514 | 107 | 61 | 2 | 1 | 105 | 137 | 237 | 9.91e-14 | 67.8 |
| MS.gene074193.t1 | MTR_5g009100 | 25.786 | 159 | 116 | 2 | 3 | 160 | 148 | 305 | 1.07e-13 | 67.8 |
| MS.gene074193.t1 | MTR_2g461580 | 25.676 | 148 | 107 | 2 | 3 | 148 | 131 | 277 | 2.11e-13 | 66.6 |
| MS.gene074193.t1 | MTR_8g074570 | 24.375 | 160 | 111 | 3 | 3 | 160 | 146 | 297 | 3.71e-13 | 66.2 |
| MS.gene074193.t1 | MTR_5g084880 | 30.909 | 110 | 75 | 1 | 52 | 160 | 2 | 111 | 1.12e-12 | 62.0 |
| MS.gene074193.t1 | MTR_1g079570 | 41.538 | 65 | 38 | 0 | 96 | 160 | 4 | 68 | 1.28e-12 | 62.0 |
| MS.gene074193.t1 | MTR_8g074560 | 29.012 | 162 | 104 | 5 | 1 | 157 | 138 | 293 | 1.37e-12 | 64.3 |
| MS.gene074193.t1 | MTR_5g083040 | 25.333 | 150 | 96 | 3 | 4 | 143 | 135 | 278 | 2.91e-12 | 63.5 |
| MS.gene074193.t1 | MTR_2g044100 | 27.673 | 159 | 111 | 2 | 4 | 160 | 143 | 299 | 3.13e-12 | 63.5 |
| MS.gene074193.t1 | MTR_2g018015 | 33.333 | 99 | 64 | 1 | 18 | 114 | 153 | 251 | 7.78e-12 | 62.0 |
| MS.gene074193.t1 | MTR_0009s0250 | 29.268 | 123 | 78 | 2 | 23 | 145 | 155 | 268 | 1.42e-11 | 61.6 |
| MS.gene074193.t1 | MTR_2g087292 | 33.333 | 84 | 56 | 0 | 62 | 145 | 134 | 217 | 7.97e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074193.t1 | AT5G33370 | 65.000 | 160 | 56 | 0 | 1 | 160 | 130 | 289 | 4.77e-76 | 230 |
| MS.gene074193.t1 | AT5G33370 | 65.000 | 160 | 56 | 0 | 1 | 160 | 130 | 289 | 2.64e-75 | 229 |
| MS.gene074193.t1 | AT3G04290 | 62.658 | 158 | 59 | 0 | 3 | 160 | 131 | 288 | 4.57e-70 | 216 |
| MS.gene074193.t1 | AT5G18430 | 62.112 | 161 | 60 | 1 | 1 | 160 | 129 | 289 | 2.04e-66 | 206 |
| MS.gene074193.t1 | AT4G28780 | 58.491 | 159 | 64 | 2 | 3 | 160 | 133 | 290 | 1.69e-61 | 194 |
| MS.gene074193.t1 | AT2G04570 | 32.919 | 161 | 105 | 2 | 1 | 160 | 128 | 286 | 1.07e-26 | 103 |
| MS.gene074193.t1 | AT5G37690 | 35.032 | 157 | 100 | 2 | 4 | 160 | 123 | 277 | 2.42e-25 | 99.8 |
| MS.gene074193.t1 | AT2G42990 | 32.298 | 161 | 106 | 2 | 1 | 160 | 128 | 286 | 2.90e-25 | 99.4 |
| MS.gene074193.t1 | AT5G37690 | 35.032 | 157 | 100 | 2 | 4 | 160 | 131 | 285 | 2.97e-25 | 99.4 |
| MS.gene074193.t1 | AT4G26790 | 35.766 | 137 | 85 | 2 | 1 | 136 | 129 | 263 | 1.94e-24 | 97.1 |
| MS.gene074193.t1 | AT4G26790 | 35.766 | 137 | 85 | 2 | 1 | 136 | 129 | 263 | 1.94e-24 | 97.1 |
| MS.gene074193.t1 | AT2G24560 | 30.247 | 162 | 104 | 3 | 4 | 160 | 138 | 295 | 1.95e-23 | 94.0 |
| MS.gene074193.t1 | AT2G24560 | 30.247 | 162 | 104 | 3 | 4 | 160 | 138 | 295 | 3.80e-23 | 94.0 |
| MS.gene074193.t1 | AT2G31550 | 31.013 | 158 | 100 | 3 | 8 | 160 | 2 | 155 | 1.94e-22 | 89.4 |
| MS.gene074193.t1 | AT4G30140 | 36.434 | 129 | 82 | 0 | 9 | 137 | 133 | 261 | 2.11e-22 | 91.7 |
| MS.gene074193.t1 | AT2G31540 | 31.288 | 163 | 103 | 3 | 3 | 160 | 138 | 296 | 2.70e-22 | 91.7 |
| MS.gene074193.t1 | AT1G74460 | 33.750 | 160 | 104 | 2 | 1 | 160 | 125 | 282 | 3.80e-22 | 91.3 |
| MS.gene074193.t1 | AT1G58430 | 30.625 | 160 | 108 | 2 | 3 | 160 | 138 | 296 | 5.56e-22 | 90.5 |
| MS.gene074193.t1 | AT3G53100 | 33.125 | 160 | 100 | 5 | 1 | 157 | 129 | 284 | 2.76e-21 | 88.6 |
| MS.gene074193.t1 | AT2G19050 | 29.054 | 148 | 103 | 1 | 9 | 154 | 131 | 278 | 4.08e-21 | 87.4 |
| MS.gene074193.t1 | AT2G30220 | 30.675 | 163 | 104 | 3 | 3 | 160 | 136 | 294 | 7.36e-21 | 87.4 |
| MS.gene074193.t1 | AT2G19050 | 29.054 | 148 | 103 | 1 | 9 | 154 | 131 | 278 | 8.56e-21 | 87.4 |
| MS.gene074193.t1 | AT2G30310 | 30.061 | 163 | 105 | 3 | 3 | 160 | 137 | 295 | 1.06e-20 | 87.0 |
| MS.gene074193.t1 | AT5G42170 | 32.278 | 158 | 101 | 2 | 4 | 160 | 153 | 305 | 1.08e-20 | 87.4 |
| MS.gene074193.t1 | AT1G75890 | 29.193 | 161 | 111 | 2 | 1 | 160 | 148 | 306 | 1.43e-20 | 87.0 |
| MS.gene074193.t1 | AT1G75890 | 29.193 | 161 | 111 | 2 | 1 | 160 | 161 | 319 | 1.52e-20 | 87.0 |
| MS.gene074193.t1 | AT1G75890 | 29.193 | 161 | 111 | 2 | 1 | 160 | 177 | 335 | 1.59e-20 | 87.0 |
| MS.gene074193.t1 | AT1G75880 | 30.818 | 159 | 107 | 2 | 3 | 160 | 155 | 311 | 1.66e-20 | 86.7 |
| MS.gene074193.t1 | AT1G75880 | 30.818 | 159 | 107 | 2 | 3 | 160 | 154 | 310 | 1.94e-20 | 86.7 |
| MS.gene074193.t1 | AT2G19060 | 34.746 | 118 | 75 | 2 | 18 | 134 | 139 | 255 | 2.09e-20 | 86.3 |
| MS.gene074193.t1 | AT5G03820 | 32.117 | 137 | 88 | 2 | 3 | 136 | 135 | 269 | 3.14e-20 | 85.9 |
| MS.gene074193.t1 | AT5G03820 | 30.380 | 158 | 105 | 2 | 3 | 157 | 163 | 318 | 4.36e-20 | 85.9 |
| MS.gene074193.t1 | AT1G71691 | 33.333 | 141 | 92 | 2 | 20 | 160 | 71 | 209 | 5.16e-20 | 84.3 |
| MS.gene074193.t1 | AT5G03810 | 30.247 | 162 | 109 | 2 | 1 | 160 | 130 | 289 | 6.03e-20 | 85.1 |
| MS.gene074193.t1 | AT5G15720 | 30.075 | 133 | 91 | 1 | 30 | 160 | 128 | 260 | 8.27e-20 | 84.3 |
| MS.gene074193.t1 | AT5G15720 | 30.075 | 133 | 91 | 1 | 30 | 160 | 159 | 291 | 1.05e-19 | 84.0 |
| MS.gene074193.t1 | AT1G71691 | 34.043 | 141 | 91 | 2 | 20 | 160 | 172 | 310 | 1.16e-19 | 84.0 |
| MS.gene074193.t1 | AT5G15720 | 30.075 | 133 | 91 | 1 | 30 | 160 | 159 | 291 | 1.72e-19 | 84.0 |
| MS.gene074193.t1 | AT1G71691 | 33.333 | 141 | 92 | 2 | 20 | 160 | 172 | 310 | 2.06e-19 | 84.0 |
| MS.gene074193.t1 | AT3G16370 | 33.333 | 126 | 81 | 2 | 1 | 125 | 130 | 253 | 2.11e-19 | 83.6 |
| MS.gene074193.t1 | AT2G19010 | 31.783 | 129 | 86 | 2 | 9 | 136 | 160 | 287 | 2.85e-19 | 83.6 |
| MS.gene074193.t1 | AT1G73610 | 33.548 | 155 | 97 | 3 | 4 | 157 | 138 | 287 | 2.91e-19 | 83.2 |
| MS.gene074193.t1 | AT2G19010 | 31.783 | 129 | 86 | 2 | 9 | 136 | 130 | 257 | 3.01e-19 | 83.2 |
| MS.gene074193.t1 | AT1G20120 | 27.329 | 161 | 114 | 2 | 1 | 160 | 178 | 336 | 3.93e-19 | 83.2 |
| MS.gene074193.t1 | AT5G08460 | 28.659 | 164 | 113 | 2 | 1 | 160 | 149 | 312 | 5.04e-19 | 82.8 |
| MS.gene074193.t1 | AT1G06990 | 27.950 | 161 | 111 | 2 | 3 | 160 | 139 | 297 | 7.16e-19 | 82.0 |
| MS.gene074193.t1 | AT1G20135 | 31.013 | 158 | 105 | 3 | 4 | 160 | 132 | 286 | 1.86e-18 | 80.9 |
| MS.gene074193.t1 | AT2G23540 | 29.878 | 164 | 110 | 4 | 1 | 160 | 151 | 313 | 1.97e-18 | 81.3 |
| MS.gene074193.t1 | AT5G45960 | 30.822 | 146 | 90 | 4 | 4 | 141 | 150 | 292 | 2.47e-18 | 80.9 |
| MS.gene074193.t1 | AT5G22810 | 33.333 | 138 | 86 | 3 | 3 | 136 | 136 | 271 | 2.75e-18 | 80.5 |
| MS.gene074193.t1 | AT1G75900 | 32.099 | 162 | 98 | 4 | 4 | 160 | 146 | 300 | 5.67e-18 | 79.7 |
| MS.gene074193.t1 | AT5G45950 | 31.646 | 158 | 102 | 5 | 4 | 160 | 142 | 294 | 6.30e-18 | 79.3 |
| MS.gene074193.t1 | AT1G29660 | 29.560 | 159 | 110 | 2 | 4 | 160 | 132 | 290 | 7.20e-18 | 79.3 |
| MS.gene074193.t1 | AT3G50400 | 31.515 | 165 | 107 | 6 | 1 | 160 | 137 | 300 | 8.77e-18 | 79.3 |
| MS.gene074193.t1 | AT5G45670 | 28.571 | 140 | 99 | 1 | 22 | 160 | 149 | 288 | 1.57e-17 | 78.6 |
| MS.gene074193.t1 | AT1G29670 | 28.481 | 158 | 112 | 1 | 4 | 160 | 132 | 289 | 1.81e-17 | 78.2 |
| MS.gene074193.t1 | AT1G29670 | 28.481 | 158 | 112 | 1 | 4 | 160 | 200 | 357 | 2.03e-17 | 78.6 |
| MS.gene074193.t1 | AT4G18970 | 29.286 | 140 | 98 | 1 | 22 | 160 | 148 | 287 | 3.67e-17 | 77.4 |
| MS.gene074193.t1 | AT4G18970 | 29.286 | 140 | 98 | 1 | 22 | 160 | 148 | 287 | 4.31e-17 | 77.4 |
| MS.gene074193.t1 | AT1G71250 | 27.333 | 150 | 106 | 2 | 13 | 160 | 152 | 300 | 4.56e-17 | 77.4 |
| MS.gene074193.t1 | AT1G33811 | 35.294 | 102 | 62 | 2 | 37 | 134 | 170 | 271 | 3.02e-16 | 75.1 |
| MS.gene074193.t1 | AT4G16230 | 35.714 | 98 | 62 | 1 | 4 | 100 | 132 | 229 | 4.60e-16 | 73.2 |
| MS.gene074193.t1 | AT2G40250 | 22.754 | 167 | 119 | 2 | 1 | 160 | 136 | 299 | 6.39e-16 | 73.9 |
| MS.gene074193.t1 | AT5G63170 | 30.128 | 156 | 102 | 4 | 4 | 157 | 131 | 281 | 7.09e-16 | 73.6 |
| MS.gene074193.t1 | AT1G23500 | 30.128 | 156 | 102 | 3 | 4 | 157 | 138 | 288 | 1.23e-15 | 73.2 |
| MS.gene074193.t1 | AT3G14820 | 29.697 | 165 | 101 | 5 | 1 | 160 | 132 | 286 | 1.59e-15 | 72.8 |
| MS.gene074193.t1 | AT1G20132 | 26.087 | 161 | 116 | 2 | 1 | 160 | 161 | 319 | 2.18e-14 | 69.7 |
| MS.gene074193.t1 | AT3G43550 | 28.485 | 165 | 104 | 4 | 1 | 160 | 130 | 285 | 3.30e-14 | 68.6 |
| MS.gene074193.t1 | AT1G58520 | 27.879 | 165 | 105 | 4 | 1 | 160 | 130 | 285 | 1.16e-13 | 67.4 |
| MS.gene074193.t1 | AT1G58525 | 27.879 | 165 | 105 | 4 | 1 | 160 | 130 | 285 | 1.16e-13 | 67.4 |
| MS.gene074193.t1 | AT1G20130 | 25.294 | 170 | 113 | 3 | 1 | 160 | 304 | 469 | 1.03e-12 | 65.1 |
| MS.gene074193.t1 | AT1G20130 | 25.294 | 170 | 113 | 3 | 1 | 160 | 284 | 449 | 1.08e-12 | 65.1 |
| MS.gene074193.t1 | AT1G59406 | 27.273 | 165 | 106 | 4 | 1 | 160 | 130 | 285 | 2.27e-12 | 63.9 |
| MS.gene074193.t1 | AT1G59030 | 27.273 | 165 | 106 | 4 | 1 | 160 | 130 | 285 | 2.27e-12 | 63.9 |
| MS.gene074193.t1 | AT1G58725 | 27.273 | 165 | 106 | 4 | 1 | 160 | 130 | 285 | 2.27e-12 | 63.9 |
| MS.gene074193.t1 | AT1G56670 | 27.485 | 171 | 101 | 5 | 3 | 160 | 136 | 296 | 5.80e-12 | 62.8 |
| MS.gene074193.t1 | AT1G56670 | 27.485 | 171 | 101 | 5 | 3 | 160 | 136 | 296 | 5.90e-12 | 62.4 |
| MS.gene074193.t1 | AT1G75910 | 30.370 | 135 | 92 | 2 | 4 | 137 | 131 | 264 | 1.66e-11 | 61.2 |
| MS.gene074193.t1 | AT2G03980 | 25.175 | 143 | 98 | 3 | 4 | 145 | 147 | 281 | 2.89e-11 | 60.8 |
| MS.gene074193.t1 | AT2G03980 | 25.175 | 143 | 98 | 3 | 4 | 145 | 147 | 281 | 2.89e-11 | 60.8 |
| MS.gene074193.t1 | AT2G03980 | 25.175 | 143 | 98 | 3 | 4 | 145 | 147 | 281 | 2.89e-11 | 60.8 |
| MS.gene074193.t1 | AT2G03980 | 25.175 | 143 | 98 | 3 | 4 | 145 | 147 | 281 | 2.89e-11 | 60.8 |
| MS.gene074193.t1 | AT5G55050 | 27.143 | 140 | 98 | 3 | 22 | 160 | 166 | 302 | 2.96e-11 | 60.8 |
| MS.gene074193.t1 | AT1G75930 | 30.882 | 136 | 87 | 4 | 28 | 160 | 158 | 289 | 7.90e-11 | 59.3 |
| MS.gene074193.t1 | AT1G71120 | 28.302 | 106 | 71 | 3 | 25 | 129 | 152 | 253 | 7.97e-11 | 59.3 |
Find 27 sgRNAs with CRISPR-Local
Find 44 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACTTGAAAACATGCTTCT+AGG | 0.266917 | 6.1:-5049895 | MS.gene074193:CDS |
| GTTACAGAAACTATATGATT+TGG | 0.274074 | 6.1:-5050043 | MS.gene074193:intron |
| ATAAGATACTTGACATATTC+AGG | 0.311449 | 6.1:+5050685 | None:intergenic |
| TGACGAGACCTTGCAGAATA+AGG | 0.321945 | 6.1:+5050718 | None:intergenic |
| AGTAGGTTAAGTGCTCTTAT+TGG | 0.359500 | 6.1:-5050829 | MS.gene074193:CDS |
| ACATGCTTCTAGGACTTAAC+AGG | 0.380135 | 6.1:-5049885 | MS.gene074193:CDS |
| TTACAGAAACTATATGATTT+GGG | 0.387755 | 6.1:-5050042 | MS.gene074193:intron |
| AGAGTTCTTGTGACAGGAAC+AGG | 0.398532 | 6.1:-5050012 | MS.gene074193:CDS |
| ATTGCTCAACGTGGTAGAAA+TGG | 0.412791 | 6.1:-5049964 | MS.gene074193:CDS |
| TAAGAGCACTTAACCTACTT+TGG | 0.431627 | 6.1:+5050833 | None:intergenic |
| GACTTAACAGGAAACTTGGC+AGG | 0.465462 | 6.1:-5049873 | MS.gene074193:CDS |
| CTAGGACTTAACAGGAAACT+TGG | 0.469763 | 6.1:-5049877 | MS.gene074193:CDS |
| TGTGACAGGAACAGGACCTA+TGG | 0.476833 | 6.1:-5050004 | MS.gene074193:CDS |
| ATTAATAATCCCGGTCAATA+CGG | 0.480874 | 6.1:-5049805 | None:intergenic |
| CTTAACTTTATTAATAATCC+CGG | 0.500065 | 6.1:-5049814 | MS.gene074193:CDS |
| CACAAAATCATTGCCACCAA+CGG | 0.525761 | 6.1:+5050759 | None:intergenic |
| AGCGTGATTACCGTATTGAC+CGG | 0.526253 | 6.1:+5049795 | None:intergenic |
| CTTGTTCTCATAACCGTTGG+TGG | 0.534126 | 6.1:-5050772 | MS.gene074193:CDS |
| GTGACAGGAACAGGACCTAT+GGG | 0.546023 | 6.1:-5050003 | MS.gene074193:CDS |
| GCTAGAAGAGTTCTTGTGAC+AGG | 0.550959 | 6.1:-5050018 | MS.gene074193:CDS |
| ACTTGGTGCCTTATTCTGCA+AGG | 0.583391 | 6.1:-5050726 | MS.gene074193:CDS |
| GCACTTGTTCTCATAACCGT+TGG | 0.594141 | 6.1:-5050775 | MS.gene074193:CDS |
| CCACGTTGAGCAATTTCTGA+AGG | 0.597567 | 6.1:+5049973 | None:intergenic |
| TCTGAAGGAACACAGCCCAT+AGG | 0.624000 | 6.1:+5049988 | None:intergenic |
| GCGTGATTACCGTATTGACC+GGG | 0.646524 | 6.1:+5049796 | None:intergenic |
| ACTTAACAGGAAACTTGGCA+GGG | 0.673315 | 6.1:-5049872 | MS.gene074193:CDS |
| CCTTCAGAAATTGCTCAACG+TGG | 0.676704 | 6.1:-5049973 | MS.gene074193:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAACATATATTATTTGTT+TGG | - | chr6.1:5050201-5050220 | MS.gene074193:intron | 10.0% |
| !!! | TTTAAAATTTTAAAAACAGA+AGG | + | chr6.1:5050443-5050462 | None:intergenic | 10.0% |
| !!! | AAGTCAATGATTTTTTTTTT+TGG | + | chr6.1:5050373-5050392 | None:intergenic | 15.0% |
| !!! | ATTATTTGTTTGGATTTTTT+AGG | - | chr6.1:5050211-5050230 | MS.gene074193:intron | 15.0% |
| !!! | TTGATTAATATACATCTTTT+AGG | - | chr6.1:5050059-5050078 | MS.gene074193:intron | 15.0% |
| !! | CTTAACTTTATTAATAATCC+CGG | - | chr6.1:5050857-5050876 | MS.gene074193:CDS | 20.0% |
| !! | TCAAAGAATTATCATTAAAG+AGG | + | chr6.1:5050043-5050062 | None:intergenic | 20.0% |
| !! | TTACAGAAACTATATGATTT+GGG | - | chr6.1:5050629-5050648 | MS.gene074193:intron | 20.0% |
| ! | ATAACTATGAGAAGTAACAT+AGG | + | chr6.1:5050602-5050621 | None:intergenic | 25.0% |
| ! | ATAAGATACTTGACATATTC+AGG | + | chr6.1:5049989-5050008 | None:intergenic | 25.0% |
| ! | GTTACAGAAACTATATGATT+TGG | - | chr6.1:5050628-5050647 | MS.gene074193:intron | 25.0% |
| !! | ATTGCTTTAAATTCATGCTA+AGG | + | chr6.1:5050122-5050141 | None:intergenic | 25.0% |
| !! | TTTTGTGAATAACTACTACT+TGG | - | chr6.1:5049928-5049947 | MS.gene074193:CDS | 25.0% |
| !!! | CAAAAAGAGCTTTTAAAAGT+AGG | - | chr6.1:5050395-5050414 | MS.gene074193:intron | 25.0% |
| GTACAACTAATCAAAAGCTT+AGG | - | chr6.1:5050081-5050100 | MS.gene074193:intron | 30.0% | |
| ! | ATCAAACAAGTCAAGTGTTT+TGG | - | chr6.1:5050568-5050587 | MS.gene074193:intron | 30.0% |
| !! | CTTTTAAAAGTAGGAACTCA+AGG | - | chr6.1:5050404-5050423 | MS.gene074193:intron | 30.0% |
| !!! | ATTTTCAAGAGTACCAAAGT+AGG | - | chr6.1:5049825-5049844 | MS.gene074193:CDS | 30.0% |
| AGTAGGTTAAGTGCTCTTAT+TGG | - | chr6.1:5049842-5049861 | MS.gene074193:CDS | 35.0% | |
| CAACTTGAAAACATGCTTCT+AGG | - | chr6.1:5050776-5050795 | MS.gene074193:CDS | 35.0% | |
| ! | GTGTTACCTGCAAAAGTTTT+TGG | + | chr6.1:5050021-5050040 | None:intergenic | 35.0% |
| ! | TGAGTACCAAAAACTTTTGC+AGG | - | chr6.1:5050012-5050031 | MS.gene074193:CDS | 35.0% |
| ! | TTTTCATTGCTGCAAACACT+GGG | - | chr6.1:5050825-5050844 | MS.gene074193:CDS | 35.0% |
| !! | TAAGAGCACTTAACCTACTT+TGG | + | chr6.1:5049841-5049860 | None:intergenic | 35.0% |
| !!! | AGAAGCATGTTTTCAAGTTG+AGG | + | chr6.1:5050776-5050795 | None:intergenic | 35.0% |
| !!! | GAAGCATGTTTTCAAGTTGA+GGG | + | chr6.1:5050775-5050794 | None:intergenic | 35.0% |
| ACTTAACAGGAAACTTGGCA+GGG | - | chr6.1:5050799-5050818 | MS.gene074193:CDS | 40.0% | |
| ATTGCTCAACGTGGTAGAAA+TGG | - | chr6.1:5050707-5050726 | MS.gene074193:CDS | 40.0% | |
| CACAAAATCATTGCCACCAA+CGG | + | chr6.1:5049915-5049934 | None:intergenic | 40.0% | |
| CTAGGACTTAACAGGAAACT+TGG | - | chr6.1:5050794-5050813 | MS.gene074193:CDS | 40.0% | |
| ! | GTTTTCATTGCTGCAAACAC+TGG | - | chr6.1:5050824-5050843 | MS.gene074193:CDS | 40.0% |
| !! | ACATGCTTCTAGGACTTAAC+AGG | - | chr6.1:5050786-5050805 | MS.gene074193:CDS | 40.0% |
| AGAGTTCTTGTGACAGGAAC+AGG | - | chr6.1:5050659-5050678 | MS.gene074193:intron | 45.0% | |
| CCACGTTGAGCAATTTCTGA+AGG | + | chr6.1:5050701-5050720 | None:intergenic | 45.0% | |
| CCTTCAGAAATTGCTCAACG+TGG | - | chr6.1:5050698-5050717 | MS.gene074193:CDS | 45.0% | |
| CTTGTTCTCATAACCGTTGG+TGG | - | chr6.1:5049899-5049918 | MS.gene074193:CDS | 45.0% | |
| GACTTAACAGGAAACTTGGC+AGG | - | chr6.1:5050798-5050817 | MS.gene074193:CDS | 45.0% | |
| GCACTTGTTCTCATAACCGT+TGG | - | chr6.1:5049896-5049915 | MS.gene074193:CDS | 45.0% | |
| GCTAGAAGAGTTCTTGTGAC+AGG | - | chr6.1:5050653-5050672 | MS.gene074193:intron | 45.0% | |
| TGACGAGACCTTGCAGAATA+AGG | + | chr6.1:5049956-5049975 | None:intergenic | 45.0% | |
| !! | ACTTGGTGCCTTATTCTGCA+AGG | - | chr6.1:5049945-5049964 | MS.gene074193:CDS | 45.0% |
| GTGACAGGAACAGGACCTAT+GGG | - | chr6.1:5050668-5050687 | MS.gene074193:CDS | 50.0% | |
| TCTGAAGGAACACAGCCCAT+AGG | + | chr6.1:5050686-5050705 | None:intergenic | 50.0% | |
| TGTGACAGGAACAGGACCTA+TGG | - | chr6.1:5050667-5050686 | MS.gene074193:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 5049806 | 5050887 | 5049806 | ID=MS.gene074193 |
| chr6.1 | mRNA | 5049806 | 5050887 | 5049806 | ID=MS.gene074193.t1;Parent=MS.gene074193 |
| chr6.1 | exon | 5050660 | 5050887 | 5050660 | ID=MS.gene074193.t1.exon1;Parent=MS.gene074193.t1 |
| chr6.1 | CDS | 5050660 | 5050887 | 5050660 | ID=cds.MS.gene074193.t1;Parent=MS.gene074193.t1 |
| chr6.1 | exon | 5049806 | 5050058 | 5049806 | ID=MS.gene074193.t1.exon2;Parent=MS.gene074193.t1 |
| chr6.1 | CDS | 5049806 | 5050058 | 5049806 | ID=cds.MS.gene074193.t1;Parent=MS.gene074193.t1 |
| Gene Sequence |
| Protein sequence |
