AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene050586


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050586.t1 MTR_7g116520 98.652 371 5 0 1 371 1 371 0.0 745
MS.gene050586.t1 MTR_1g024890 69.210 367 111 1 1 367 1 365 0.0 548
MS.gene050586.t1 MTR_7g116500 72.346 358 96 1 15 369 11 368 0.0 546
MS.gene050586.t1 MTR_7g116570 70.308 357 106 0 12 368 12 368 0.0 543
MS.gene050586.t1 MTR_6g021530 72.829 357 94 2 15 368 8 364 0.0 543
MS.gene050586.t1 MTR_7g116510 71.989 357 97 2 14 369 7 361 0.0 542
MS.gene050586.t1 MTR_4g019880 69.672 366 104 2 6 369 9 369 0.0 529
MS.gene050586.t1 MTR_1g079540 67.297 370 114 2 1 368 1 365 0.0 521
MS.gene050586.t1 MTR_7g008060 67.967 359 101 2 11 368 9 354 0.0 512
MS.gene050586.t1 MTR_1g079530 65.546 357 117 2 13 369 8 358 2.76e-177 497
MS.gene050586.t1 MTR_1g069175 63.687 358 128 2 14 369 13 370 6.60e-175 491
MS.gene050586.t1 MTR_1g079590 67.857 196 61 1 16 209 11 206 2.47e-91 273
MS.gene050586.t1 MTR_8g079050 37.333 375 222 8 4 366 3 376 1.64e-79 248
MS.gene050586.t1 MTR_5g078210 37.982 337 203 5 14 349 7 338 2.96e-77 242
MS.gene050586.t1 MTR_2g033930 37.989 358 213 6 12 364 8 361 4.34e-77 242
MS.gene050586.t1 MTR_8g087890 39.335 361 209 7 12 366 7 363 1.80e-76 240
MS.gene050586.t1 MTR_3g005650 35.635 362 228 5 5 366 1 357 4.83e-76 239
MS.gene050586.t1 MTR_5g084750 36.937 333 197 7 14 340 11 336 4.76e-75 236
MS.gene050586.t1 MTR_4g122200 39.697 330 194 4 34 360 35 362 6.81e-75 236
MS.gene050586.t1 MTR_3g098270 38.507 335 193 5 34 360 34 363 9.09e-75 237
MS.gene050586.t1 MTR_3g024510 38.504 361 209 8 9 361 10 365 5.94e-73 231
MS.gene050586.t1 MTR_2g033920 36.620 355 220 4 13 364 14 366 2.84e-71 227
MS.gene050586.t1 MTR_4g035353 34.174 357 228 4 16 366 8 363 9.04e-71 226
MS.gene050586.t1 MTR_3g464730 34.493 345 221 5 7 348 1 343 3.47e-70 224
MS.gene050586.t1 MTR_0565s0010 35.775 355 223 5 15 366 13 365 2.76e-69 222
MS.gene050586.t1 MTR_3g435540 35.207 338 212 5 14 349 6 338 5.56e-69 221
MS.gene050586.t1 MTR_3g082830 36.646 322 192 7 34 349 38 353 7.60e-69 221
MS.gene050586.t1 MTR_3g052490 34.218 377 226 9 1 366 1 366 9.13e-69 221
MS.gene050586.t1 MTR_5g084770 36.283 339 205 6 13 343 3 338 9.59e-69 220
MS.gene050586.t1 MTR_5g074270 34.513 339 214 5 12 345 11 346 3.74e-67 216
MS.gene050586.t1 MTR_5g084790 34.111 343 211 7 12 348 13 346 4.18e-67 216
MS.gene050586.t1 MTR_8g075230 37.695 321 188 6 34 348 36 350 6.13e-67 216
MS.gene050586.t1 MTR_5g093090 34.706 340 208 5 34 365 28 361 3.28e-66 214
MS.gene050586.t1 MTR_8g074570 35.821 335 197 8 36 360 40 366 4.88e-66 214
MS.gene050586.t1 MTR_4g108690 36.709 316 196 4 36 349 29 342 1.63e-65 212
MS.gene050586.t1 MTR_3g023220 38.138 333 190 8 34 364 33 351 1.96e-64 209
MS.gene050586.t1 MTR_3g005660 37.278 338 204 6 34 366 36 370 2.49e-64 209
MS.gene050586.t1 MTR_5g009100 34.441 331 214 3 36 364 48 377 1.90e-63 207
MS.gene050586.t1 MTR_1g025680 36.313 358 211 8 9 355 5 356 2.62e-63 209
MS.gene050586.t1 MTR_2g100620 36.728 324 191 7 34 347 31 350 3.09e-63 206
MS.gene050586.t1 MTR_3g052480 33.600 375 231 9 1 366 3 368 3.31e-63 206
MS.gene050586.t1 MTR_8g014910 34.294 347 215 8 12 348 4 347 5.54e-63 205
MS.gene050586.t1 MTR_1g025760 32.877 365 217 8 4 348 38 394 1.54e-62 206
MS.gene050586.t1 MTR_1g025780 34.483 348 208 7 15 349 14 354 1.92e-62 204
MS.gene050586.t1 MTR_2g017925 36.527 334 196 8 34 364 33 353 7.23e-62 203
MS.gene050586.t1 MTR_2g084585 34.985 343 217 5 9 348 5 344 9.67e-62 202
MS.gene050586.t1 MTR_1g025700 37.812 320 188 5 34 348 50 363 1.61e-61 202
MS.gene050586.t1 MTR_3g052580 33.529 340 213 5 34 366 28 361 2.41e-61 202
MS.gene050586.t1 MTR_1g079570 61.151 139 54 0 229 367 4 142 2.61e-61 194
MS.gene050586.t1 MTR_3g052580 33.529 340 213 5 34 366 27 360 4.27e-61 202
MS.gene050586.t1 MTR_1g025720 34.831 356 209 7 15 356 9 355 1.21e-60 199
MS.gene050586.t1 MTR_5g022640 35.913 323 194 7 34 349 43 359 1.45e-60 199
MS.gene050586.t1 MTR_2g044100 33.811 349 215 6 30 369 39 380 4.21e-60 199
MS.gene050586.t1 MTR_8g075220 35.347 331 197 8 34 353 40 364 1.31e-59 197
MS.gene050586.t1 MTR_4g056280 34.663 326 207 5 34 356 30 352 1.55e-59 196
MS.gene050586.t1 MTR_4g087985 34.513 339 201 9 17 339 15 348 2.10e-59 196
MS.gene050586.t1 MTR_2g015080 32.194 351 215 8 6 339 8 352 9.03e-59 195
MS.gene050586.t1 MTR_3g114120 33.851 322 198 6 34 348 47 360 4.35e-58 193
MS.gene050586.t1 MTR_8g075200 34.251 327 201 8 34 353 41 360 1.92e-57 192
MS.gene050586.t1 MTR_5g022630 35.000 320 200 7 34 348 43 359 4.07e-57 190
MS.gene050586.t1 MTR_2g017965 34.783 345 191 9 35 364 34 359 3.67e-56 188
MS.gene050586.t1 MTR_2g017955 30.471 361 232 8 11 363 8 357 4.59e-56 188
MS.gene050586.t1 MTR_8g087870 33.134 335 210 6 34 366 29 351 1.23e-55 186
MS.gene050586.t1 MTR_3g114090 34.769 325 200 6 30 348 32 350 9.86e-55 184
MS.gene050586.t1 MTR_5g078210 35.439 285 179 4 14 297 7 287 1.07e-54 183
MS.gene050586.t1 MTR_8g074560 33.521 355 205 11 28 364 25 366 1.34e-54 184
MS.gene050586.t1 MTR_1g025910 33.628 339 204 6 39 363 41 372 1.35e-53 181
MS.gene050586.t1 MTR_8g031420 32.456 342 209 7 32 364 33 361 3.67e-53 180
MS.gene050586.t1 MTR_8g031430 32.845 341 205 8 34 364 37 363 3.82e-53 180
MS.gene050586.t1 MTR_2g017875 31.138 334 217 6 34 363 34 358 3.48e-52 177
MS.gene050586.t1 MTR_8g031390 34.302 344 203 9 34 368 37 366 4.15e-52 177
MS.gene050586.t1 MTR_8g022790 30.541 370 230 9 10 366 6 361 7.47e-52 176
MS.gene050586.t1 MTR_8g074580 29.187 418 235 10 2 365 8 418 1.68e-51 177
MS.gene050586.t1 MTR_4g056160 32.508 323 207 6 34 349 27 345 1.69e-51 175
MS.gene050586.t1 MTR_8g031400 33.918 342 200 8 34 364 37 363 2.32e-51 175
MS.gene050586.t1 MTR_2g033920 36.364 286 178 3 13 296 14 297 2.96e-50 171
MS.gene050586.t1 MTR_5g083040 31.193 327 212 5 34 351 32 354 5.41e-50 172
MS.gene050586.t1 MTR_2g017915 31.250 368 197 10 14 364 9 337 1.00e-48 168
MS.gene050586.t1 MTR_8g022810 30.086 349 223 8 14 351 21 359 1.02e-47 166
MS.gene050586.t1 MTR_3g021460 26.446 363 248 7 5 364 2 348 2.21e-45 159
MS.gene050586.t1 MTR_0009s0250 30.149 335 213 10 14 342 11 330 2.32e-45 159
MS.gene050586.t1 MTR_2g461580 27.195 353 236 8 18 367 17 351 1.01e-43 155
MS.gene050586.t1 MTR_8g031390 34.386 285 169 8 34 314 37 307 4.90e-42 149
MS.gene050586.t1 MTR_5g093090 32.714 269 167 5 34 294 28 290 2.57e-38 139
MS.gene050586.t1 MTR_5g016030 94.030 67 4 0 251 317 7 73 1.11e-37 130
MS.gene050586.t1 MTR_8g022810 27.586 348 180 9 14 351 21 306 9.78e-35 130
MS.gene050586.t1 MTR_2g017925 32.489 237 146 6 131 364 25 250 4.51e-34 127
MS.gene050586.t1 MTR_1g030275 31.519 349 188 13 34 350 39 368 1.75e-32 125
MS.gene050586.t1 MTR_1g030220 28.841 371 221 14 9 350 15 371 8.75e-31 121
MS.gene050586.t1 MTR_8g089805 27.704 379 225 14 4 350 13 374 2.43e-30 120
MS.gene050586.t1 MTR_7g111780 29.619 341 199 12 36 357 38 356 4.81e-30 118
MS.gene050586.t1 MTR_8g028160 27.604 384 231 15 1 351 1 370 4.90e-30 119
MS.gene050586.t1 MTR_1g030268 32.277 347 188 13 34 350 40 369 7.62e-30 118
MS.gene050586.t1 MTR_2g015580 30.199 351 215 13 34 363 47 388 1.70e-29 117
MS.gene050586.t1 MTR_0127s0040 27.979 193 138 1 161 353 35 226 2.97e-29 113
MS.gene050586.t1 MTR_1108s0010 30.180 222 140 4 137 356 3 211 3.68e-29 112
MS.gene050586.t1 MTR_2g018015 35.349 215 135 3 36 247 38 251 5.88e-29 114
MS.gene050586.t1 MTR_2g015630 28.889 360 224 13 14 350 11 361 6.69e-29 115
MS.gene050586.t1 MTR_7g116870 28.035 346 208 11 33 351 32 363 9.06e-29 115
MS.gene050586.t1 MTR_1g030340 30.411 365 197 16 34 361 42 386 1.13e-28 115
MS.gene050586.t1 MTR_2g015590 28.261 368 221 13 8 350 11 360 1.62e-28 114
MS.gene050586.t1 MTR_6g081170 62.791 86 29 1 42 127 1 83 3.42e-27 103
MS.gene050586.t1 MTR_4g036375 37.576 165 99 3 34 195 30 193 6.82e-27 105
MS.gene050586.t1 MTR_6g007100 28.060 335 206 10 34 351 33 349 1.03e-26 109
MS.gene050586.t1 MTR_5g087690 26.347 334 204 10 34 349 50 359 1.31e-26 109
MS.gene050586.t1 MTR_7g087190 26.923 364 214 15 34 361 43 390 2.53e-26 108
MS.gene050586.t1 MTR_1g030230 28.866 388 218 15 12 359 4 373 5.26e-26 107
MS.gene050586.t1 MTR_2g087292 26.506 332 160 7 14 342 11 261 1.11e-25 105
MS.gene050586.t1 MTR_1g092690 27.044 318 191 13 34 337 51 341 1.23e-25 106
MS.gene050586.t1 MTR_3g463960 26.554 354 215 12 26 350 36 373 1.51e-25 106
MS.gene050586.t1 MTR_3g463950 26.554 354 215 12 26 350 36 373 1.51e-25 106
MS.gene050586.t1 MTR_3g463970 26.554 354 215 12 26 350 36 373 1.51e-25 106
MS.gene050586.t1 MTR_3g463940 26.554 354 215 12 26 350 36 373 1.51e-25 106
MS.gene050586.t1 MTR_5g093090 35.714 168 97 3 34 194 28 191 4.29e-25 101
MS.gene050586.t1 MTR_7g113860 28.571 350 200 13 34 350 29 361 6.12e-25 104
MS.gene050586.t1 MTR_1g082390 28.613 346 202 12 34 349 31 361 8.50e-25 104
MS.gene050586.t1 MTR_6g007090 31.214 346 192 13 34 351 39 366 1.57e-24 103
MS.gene050586.t1 MTR_1g060500 26.543 324 196 11 33 337 39 339 2.38e-24 102
MS.gene050586.t1 MTR_7g113860 27.926 376 216 14 13 350 9 367 2.38e-24 103
MS.gene050586.t1 MTR_6g007095 29.885 348 194 14 34 351 41 368 2.99e-24 104
MS.gene050586.t1 MTR_6g007095 29.582 311 181 10 60 351 393 684 7.91e-23 100
MS.gene050586.t1 MTR_1g060490 25.688 327 207 13 33 347 36 338 9.38e-24 100
MS.gene050586.t1 MTR_3g463930 26.171 363 212 13 26 350 36 380 1.87e-23 100
MS.gene050586.t1 MTR_7g104220 26.582 316 197 10 34 337 42 334 2.52e-23 99.8
MS.gene050586.t1 MTR_8g038680 30.526 380 210 14 4 351 3 360 3.70e-23 99.8
MS.gene050586.t1 MTR_7g111780 29.259 270 164 9 102 357 1 257 7.00e-23 97.1
MS.gene050586.t1 MTR_7g033150 25.260 384 215 13 19 351 10 372 1.52e-22 98.2
MS.gene050586.t1 MTR_2g043980 27.869 366 211 13 12 350 7 346 2.12e-22 97.4
MS.gene050586.t1 MTR_7g033165 28.492 358 207 15 34 358 33 374 4.56e-22 96.7
MS.gene050586.t1 MTR_3g069780 26.934 349 215 15 33 357 29 361 8.25e-22 95.9
MS.gene050586.t1 MTR_8g089805 26.298 289 175 10 94 350 24 306 8.84e-22 95.1
MS.gene050586.t1 MTR_2g015650 29.683 347 196 17 34 350 31 359 1.74e-21 95.1
MS.gene050586.t1 MTR_1g030265 29.431 299 167 11 95 359 58 346 3.72e-21 93.6
MS.gene050586.t1 MTR_3g438030 26.648 349 216 15 33 357 29 361 7.13e-21 93.2
MS.gene050586.t1 MTR_1g092740 25.926 351 204 15 21 349 25 341 9.60e-21 92.4
MS.gene050586.t1 MTR_1g092750 25.552 317 197 12 35 337 41 332 1.28e-19 89.4
MS.gene050586.t1 MTR_7g033155 24.112 394 228 12 12 351 10 386 1.82e-19 89.4
MS.gene050586.t1 MTR_2g015670 29.586 338 194 16 34 350 31 345 1.83e-19 89.0
MS.gene050586.t1 MTR_2g015590 27.687 307 184 10 8 294 11 299 2.73e-19 88.2
MS.gene050586.t1 MTR_1g030268 31.915 282 153 11 34 294 40 303 3.03e-19 87.8
MS.gene050586.t1 MTR_3g069520 29.014 355 198 21 33 357 29 359 3.30e-19 88.2
MS.gene050586.t1 MTR_5g074210 29.787 141 97 1 207 345 62 202 4.03e-19 85.5
MS.gene050586.t1 MTR_7g113860 26.736 288 170 9 95 350 15 293 2.18e-18 85.1
MS.gene050586.t1 MTR_6g049220 50.562 89 43 1 34 121 30 118 1.46e-17 79.7
MS.gene050586.t1 MTR_2g017895 25.172 290 187 7 81 366 4 267 4.26e-17 80.9
MS.gene050586.t1 MTR_4g104240 25.753 365 219 15 18 350 18 362 1.15e-16 80.9
MS.gene050586.t1 MTR_5g084880 28.873 142 88 4 185 317 2 139 1.04e-13 68.2
MS.gene050586.t1 MTR_7g033165 29.730 259 143 12 34 269 33 275 3.62e-13 70.1
MS.gene050586.t1 MTR_8g012540 27.692 325 197 13 11 314 8 315 2.56e-12 67.8
MS.gene050586.t1 MTR_3g011860 26.923 156 103 4 176 324 171 322 4.39e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050586.t1 AT5G33370 75.893 336 81 0 33 368 29 364 0.0 554
MS.gene050586.t1 AT3G04290 75.588 340 83 0 30 369 25 364 0.0 543
MS.gene050586.t1 AT5G18430 74.631 339 84 2 30 366 24 362 0.0 523
MS.gene050586.t1 AT4G28780 67.486 366 113 3 9 369 2 366 0.0 512
MS.gene050586.t1 AT5G33370 75.573 262 64 0 33 294 29 290 5.34e-149 424
MS.gene050586.t1 AT3G50400 39.227 362 204 11 14 360 8 368 4.70e-79 247
MS.gene050586.t1 AT2G23540 38.279 337 201 6 34 363 48 384 1.43e-78 246
MS.gene050586.t1 AT1G29660 39.118 363 215 5 7 366 5 364 2.94e-77 242
MS.gene050586.t1 AT5G15720 38.279 337 202 4 34 366 30 364 3.95e-76 239
MS.gene050586.t1 AT5G08460 36.639 363 222 4 4 361 21 380 1.02e-75 239
MS.gene050586.t1 AT1G71691 40.299 335 194 6 34 367 55 384 4.76e-74 235
MS.gene050586.t1 AT5G37690 39.809 314 185 4 36 348 29 339 5.44e-74 234
MS.gene050586.t1 AT2G04570 35.000 340 215 5 15 351 9 345 7.59e-72 228
MS.gene050586.t1 AT1G71250 36.418 335 209 3 34 366 41 373 1.71e-71 228
MS.gene050586.t1 AT2G42990 35.127 353 209 9 7 349 1 343 5.25e-70 223
MS.gene050586.t1 AT4G26790 35.737 319 199 5 34 349 29 344 1.45e-69 222
MS.gene050586.t1 AT4G26790 35.737 319 199 5 34 349 29 344 1.45e-69 222
MS.gene050586.t1 AT1G33811 37.746 355 204 8 26 366 19 370 1.94e-69 223
MS.gene050586.t1 AT5G37690 38.217 314 182 5 36 348 29 331 2.59e-68 219
MS.gene050586.t1 AT5G45670 38.739 333 198 5 14 343 9 338 1.20e-67 218
MS.gene050586.t1 AT5G42170 36.909 317 191 5 35 348 51 361 1.86e-67 217
MS.gene050586.t1 AT1G29670 35.501 369 223 6 7 366 1 363 1.93e-67 217
MS.gene050586.t1 AT1G29670 35.310 371 225 6 5 366 67 431 1.10e-66 217
MS.gene050586.t1 AT5G03820 36.232 345 207 6 14 348 8 349 1.10e-66 215
MS.gene050586.t1 AT1G75890 36.250 320 191 7 34 346 47 360 2.66e-66 214
MS.gene050586.t1 AT5G03820 35.897 351 212 6 8 348 30 377 2.79e-66 215
MS.gene050586.t1 AT1G06990 35.294 323 198 5 34 348 37 356 3.39e-66 214
MS.gene050586.t1 AT3G16370 36.677 319 195 6 34 348 30 345 4.43e-66 213
MS.gene050586.t1 AT1G75890 36.250 320 191 7 34 346 76 389 5.14e-66 214
MS.gene050586.t1 AT4G18970 39.617 313 181 5 35 343 29 337 1.13e-65 213
MS.gene050586.t1 AT4G18970 39.490 314 182 5 34 343 28 337 6.04e-65 212
MS.gene050586.t1 AT1G74460 36.646 322 199 5 36 355 25 343 6.28e-65 211
MS.gene050586.t1 AT5G03810 36.337 344 207 6 14 348 5 345 8.71e-65 210
MS.gene050586.t1 AT5G45950 34.161 322 202 8 34 353 40 353 1.68e-64 209
MS.gene050586.t1 AT1G75880 36.025 322 195 5 34 349 52 368 3.58e-64 209
MS.gene050586.t1 AT5G41890 35.756 344 195 9 36 360 33 369 6.12e-64 208
MS.gene050586.t1 AT1G75890 34.835 333 191 8 34 346 47 373 6.66e-64 208
MS.gene050586.t1 AT3G53100 36.499 337 206 6 16 348 11 343 1.03e-63 207
MS.gene050586.t1 AT2G30220 35.370 311 193 6 34 339 33 340 1.67e-63 207
MS.gene050586.t1 AT1G58430 34.234 333 208 6 14 337 10 340 1.99e-63 206
MS.gene050586.t1 AT2G30310 34.286 315 199 6 34 343 34 345 2.52e-63 206
MS.gene050586.t1 AT5G22810 37.963 324 186 10 34 348 34 351 2.66e-63 206
MS.gene050586.t1 AT1G75880 36.025 322 194 6 34 349 52 367 2.93e-63 206
MS.gene050586.t1 AT1G20120 35.093 322 197 6 34 349 78 393 3.77e-63 207
MS.gene050586.t1 AT5G45960 34.891 321 197 6 27 339 40 356 6.95e-62 203
MS.gene050586.t1 AT2G24560 32.551 341 213 7 9 337 4 339 2.07e-61 201
MS.gene050586.t1 AT2G31540 35.032 314 198 5 34 343 35 346 4.68e-61 201
MS.gene050586.t1 AT5G55050 34.412 340 210 7 35 365 40 375 4.77e-61 201
MS.gene050586.t1 AT4G10950 33.934 333 217 3 34 364 71 402 1.34e-59 198
MS.gene050586.t1 AT1G59406 32.303 356 230 6 5 356 1 349 6.52e-59 194
MS.gene050586.t1 AT1G59030 32.303 356 230 6 5 356 1 349 6.52e-59 194
MS.gene050586.t1 AT1G58725 32.303 356 230 6 5 356 1 349 6.52e-59 194
MS.gene050586.t1 AT2G19060 34.796 319 192 7 35 350 31 336 8.70e-59 194
MS.gene050586.t1 AT2G40250 33.019 318 201 4 34 343 36 349 2.06e-57 191
MS.gene050586.t1 AT3G14820 33.333 330 200 8 34 355 32 349 2.30e-57 191
MS.gene050586.t1 AT4G10950 33.934 333 213 4 34 364 71 398 3.10e-57 192
MS.gene050586.t1 AT1G75900 33.540 322 199 7 34 348 43 356 1.02e-56 189
MS.gene050586.t1 AT1G20130 33.535 331 199 7 34 348 184 509 2.59e-56 192
MS.gene050586.t1 AT1G20130 33.535 331 199 7 34 348 204 529 3.29e-56 192
MS.gene050586.t1 AT1G58520 33.333 327 200 7 34 356 30 342 5.78e-56 187
MS.gene050586.t1 AT1G58525 33.333 327 200 7 34 356 30 342 5.78e-56 187
MS.gene050586.t1 AT1G71691 36.842 285 175 5 84 367 3 283 3.10e-55 183
MS.gene050586.t1 AT2G19010 33.945 327 198 7 35 358 31 342 7.18e-55 184
MS.gene050586.t1 AT1G73610 35.692 325 188 8 28 349 31 337 1.11e-54 183
MS.gene050586.t1 AT2G19010 33.841 328 199 7 34 358 60 372 1.15e-54 184
MS.gene050586.t1 AT2G19050 33.022 321 193 8 35 350 32 335 2.20e-54 183
MS.gene050586.t1 AT1G20132 33.033 333 206 8 34 359 61 383 5.45e-54 182
MS.gene050586.t1 AT5G15720 33.929 280 181 3 85 360 48 327 8.94e-54 181
MS.gene050586.t1 AT1G20135 31.845 336 212 8 7 339 1 322 1.10e-53 180
MS.gene050586.t1 AT4G30140 34.925 335 192 8 35 364 34 347 2.96e-53 180
MS.gene050586.t1 AT3G43570 29.944 354 212 6 5 356 1 320 7.65e-53 178
MS.gene050586.t1 AT5G63170 32.738 336 208 7 7 339 1 321 8.73e-52 176
MS.gene050586.t1 AT5G15720 37.175 269 163 4 34 298 30 296 2.11e-50 171
MS.gene050586.t1 AT5G40990 30.105 382 244 8 1 367 1 374 2.53e-50 173
MS.gene050586.t1 AT4G16230 46.535 202 104 3 34 233 30 229 3.73e-50 169
MS.gene050586.t1 AT1G23500 30.966 352 220 8 3 350 7 339 8.76e-49 168
MS.gene050586.t1 AT1G71691 40.458 262 150 6 34 294 55 311 3.37e-48 166
MS.gene050586.t1 AT1G71120 34.795 342 202 12 27 360 24 352 4.99e-48 166
MS.gene050586.t1 AT2G24560 31.879 298 186 7 9 294 4 296 2.12e-47 164
MS.gene050586.t1 AT1G53940 31.909 351 213 10 32 367 37 376 1.37e-45 160
MS.gene050586.t1 AT2G19050 35.417 240 147 4 35 274 32 263 1.12e-44 155
MS.gene050586.t1 AT3G43550 31.741 293 190 5 5 294 1 286 1.05e-43 153
MS.gene050586.t1 AT1G75930 31.138 334 208 9 22 348 17 335 2.10e-43 154
MS.gene050586.t1 AT1G75920 29.969 327 199 9 34 349 29 336 2.82e-43 154
MS.gene050586.t1 AT1G75910 29.738 343 220 8 15 348 5 335 6.94e-43 152
MS.gene050586.t1 AT3G14225 28.940 349 228 7 32 366 35 377 2.18e-42 152
MS.gene050586.t1 AT3G14225 29.310 348 224 8 32 366 35 373 5.07e-42 151
MS.gene050586.t1 AT1G53920 29.231 325 214 7 34 350 48 364 4.14e-41 149
MS.gene050586.t1 AT1G53990 28.647 377 238 12 5 366 4 364 8.34e-41 147
MS.gene050586.t1 AT1G75920 28.655 342 199 10 34 349 24 346 1.77e-39 144
MS.gene050586.t1 AT2G03980 29.936 314 204 7 34 340 43 347 6.71e-38 140
MS.gene050586.t1 AT2G03980 29.936 314 204 7 34 340 43 347 6.71e-38 140
MS.gene050586.t1 AT2G03980 29.936 314 204 7 34 340 43 347 6.71e-38 140
MS.gene050586.t1 AT2G03980 29.936 314 204 7 34 340 43 347 6.71e-38 140
MS.gene050586.t1 AT2G31550 30.732 205 139 2 141 343 2 205 1.45e-35 129
MS.gene050586.t1 AT1G75920 28.882 322 178 9 34 349 29 305 3.46e-35 131
MS.gene050586.t1 AT1G56670 29.787 376 215 11 3 349 2 357 4.07e-35 132
MS.gene050586.t1 AT1G75920 28.000 300 186 9 61 349 28 308 5.71e-33 125
MS.gene050586.t1 AT4G01130 27.249 378 229 12 8 354 9 371 2.80e-31 122
MS.gene050586.t1 AT1G09390 29.664 327 206 9 36 349 39 354 6.49e-30 118
MS.gene050586.t1 AT1G54030 27.300 337 218 11 33 366 51 363 1.52e-29 118
MS.gene050586.t1 AT5G45910 30.618 356 201 15 27 350 23 364 8.72e-29 115
MS.gene050586.t1 AT2G04020 32.456 228 135 5 34 251 43 261 2.83e-28 111
MS.gene050586.t1 AT1G53940 30.882 272 168 9 32 294 37 297 7.56e-27 108
MS.gene050586.t1 AT3G26430 27.926 376 219 13 13 350 4 365 1.36e-26 109
MS.gene050586.t1 AT2G04020 32.367 207 127 4 34 236 43 240 1.59e-26 108
MS.gene050586.t1 AT1G54790 27.321 377 226 13 6 350 4 364 2.23e-26 108
MS.gene050586.t1 AT3G09930 27.726 321 191 13 35 338 40 336 5.53e-26 107
MS.gene050586.t1 AT3G09930 27.726 321 191 13 35 338 40 336 5.53e-26 107
MS.gene050586.t1 AT5G03610 28.972 321 186 14 36 339 45 340 8.34e-26 107
MS.gene050586.t1 AT1G67830 28.490 351 205 12 34 352 30 366 9.88e-26 107
MS.gene050586.t1 AT2G27360 28.021 389 237 16 6 369 8 378 1.19e-25 107
MS.gene050586.t1 AT3G14220 26.374 364 213 15 24 364 20 351 1.24e-25 106
MS.gene050586.t1 AT5G14450 26.579 380 233 12 3 350 8 373 3.93e-25 105
MS.gene050586.t1 AT1G54000 27.066 351 215 13 34 368 36 361 9.54e-25 104
MS.gene050586.t1 AT3G27950 27.869 366 220 11 14 351 9 358 1.25e-24 103
MS.gene050586.t1 AT4G16233 36.000 125 79 1 243 366 6 130 1.51e-24 97.8
MS.gene050586.t1 AT3G62280 28.319 339 207 11 38 359 40 359 1.91e-24 103
MS.gene050586.t1 AT1G28580 29.261 352 202 17 26 350 35 366 3.68e-24 102
MS.gene050586.t1 AT1G31550 28.307 378 216 18 5 350 10 364 4.32e-24 102
MS.gene050586.t1 AT1G28570 27.820 399 234 20 5 371 6 382 1.37e-23 101
MS.gene050586.t1 AT1G54020 25.826 333 223 9 36 364 35 347 4.62e-23 99.4
MS.gene050586.t1 AT3G14210 27.624 362 213 14 30 371 32 364 8.00e-23 99.0
MS.gene050586.t1 AT1G28600 27.394 376 221 14 7 350 4 359 9.00e-23 99.0
MS.gene050586.t1 AT1G56670 29.114 316 180 9 3 294 2 297 1.44e-22 96.7
MS.gene050586.t1 AT3G05180 27.089 347 209 11 34 350 36 368 2.94e-22 97.4
MS.gene050586.t1 AT1G28650 27.321 377 236 14 1 350 1 366 3.41e-22 97.1
MS.gene050586.t1 AT1G54010 25.656 343 216 12 36 364 38 355 9.16e-22 95.9
MS.gene050586.t1 AT1G28610 26.385 379 230 17 1 350 1 359 1.01e-21 95.9
MS.gene050586.t1 AT3G48460 26.287 369 226 15 12 351 13 364 1.65e-21 95.1
MS.gene050586.t1 AT1G28670 28.493 365 217 16 13 350 18 365 2.72e-21 94.7
MS.gene050586.t1 AT4G16220 49.558 113 53 3 14 125 11 120 3.59e-21 91.7
MS.gene050586.t1 AT4G01130 25.430 291 180 8 95 354 1 285 3.93e-21 92.8
MS.gene050586.t1 AT1G54790 27.089 347 205 13 36 350 33 363 4.99e-21 94.0
MS.gene050586.t1 AT4G01130 26.557 305 191 10 8 294 9 298 1.24e-20 92.0
MS.gene050586.t1 AT1G28640 27.793 367 218 17 13 351 18 365 2.70e-19 89.0
MS.gene050586.t1 AT1G54030 28.333 240 147 9 33 269 51 268 3.31e-19 87.8
MS.gene050586.t1 AT1G28590 27.299 348 214 14 26 350 34 365 1.65e-18 86.7
MS.gene050586.t1 AT1G28660 28.739 341 200 14 38 350 39 364 7.20e-18 84.7
MS.gene050586.t1 AT1G54790 26.471 374 199 16 36 350 33 389 3.05e-17 82.8
MS.gene050586.t1 AT2G36325 25.846 325 207 14 36 348 49 351 1.53e-15 77.4
MS.gene050586.t1 AT1G54020 23.786 206 152 2 161 364 10 212 1.74e-13 69.7
MS.gene050586.t1 AT1G28580 26.298 289 180 13 84 350 8 285 2.23e-13 70.5
MS.gene050586.t1 AT1G54020 23.786 206 152 2 161 364 59 261 3.18e-13 69.7
MS.gene050586.t1 AT1G54020 23.786 206 152 2 161 364 59 261 3.18e-13 69.7
MS.gene050586.t1 AT1G54020 23.786 206 152 2 161 364 59 261 3.18e-13 69.7
MS.gene050586.t1 AT1G28600 31.250 192 97 10 26 203 29 199 9.29e-11 61.6

Find 86 sgRNAs with CRISPR-Local

Find 175 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACAACTCAACAATGAAAT+TGG 0.265556 7.3:-1623648 MS.gene050586:CDS
CAATTTCATTGTTGAGTTGT+TGG 0.301857 7.3:+1623649 None:intergenic
TTAAGTTCAGGGCTTAAATA+AGG 0.302412 7.3:+1625224 None:intergenic
TAAACATAATTAGAATATTT+AGG 0.305299 7.3:-1624968 MS.gene050586:CDS
AATGCCAGCAGAAGCAAAAT+TGG 0.310076 7.3:+1625178 None:intergenic
TAAATCCATGTCTGCCACTA+TGG 0.318143 7.3:-1625764 None:intergenic
ACCGTGACGAATATGCATTT+TGG 0.331582 7.3:-1623355 MS.gene050586:CDS
GGTGATTCTCTTGTTGATAA+TGG 0.342192 7.3:-1625643 MS.gene050586:CDS
AATTAGAATATTTAGGCAAT+TGG 0.350952 7.3:-1624961 MS.gene050586:CDS
CGAGCTGATGCTCCTCCTTA+TGG 0.356092 7.3:-1625592 MS.gene050586:CDS
TTAACTTACAAATTGGATTC+CGG 0.357030 7.3:+1625139 None:intergenic
CAACGTGCTTTCTTTGTGTT+TGG 0.358588 7.3:-1625664 MS.gene050586:CDS
ATTTAAGCCCTGAACTTAAC+GGG 0.376401 7.3:-1625220 MS.gene050586:CDS
ATCACGCCAATACAATTTAC+CGG 0.383099 7.3:-1624793 MS.gene050586:CDS
AATGCATATTCGTCACGGTT+AGG 0.390126 7.3:+1623359 None:intergenic
CCCACTGGACGTTTCTCTAA+TGG 0.397307 7.3:-1625547 MS.gene050586:CDS
AGTGTAGTTACCATATGCTT+GGG 0.398411 7.3:+1623566 None:intergenic
AATTGGTTCAAATGTATTCA+TGG 0.399785 7.3:-1623631 MS.gene050586:CDS
ATGCATATTCGTCACGGTTA+GGG 0.409068 7.3:+1623360 None:intergenic
ATCTTTCCCCGTTAAGTTCA+GGG 0.412800 7.3:+1625213 None:intergenic
TATTTAAGCCCTGAACTTAA+CGG 0.415361 7.3:-1625221 MS.gene050586:CDS
AATCTTTCCCCGTTAAGTTC+AGG 0.420441 7.3:+1625212 None:intergenic
TTAGCCCAACGAGGCACAAA+TGG 0.422424 7.3:-1623735 MS.gene050586:CDS
AAAACAGTGCTGAGATTCAT+TGG 0.424708 7.3:+1623254 None:intergenic
GTCAATAATCCCCAAGCATA+TGG 0.428487 7.3:-1623576 MS.gene050586:intron
ATTCATTGGATACATATAAT+CGG 0.429212 7.3:+1623268 None:intergenic
ACTAAGCTCTGAGTTTGTTC+AGG 0.433324 7.3:+1624894 None:intergenic
GGGCTTAAATAAGGCAAAGT+TGG 0.437321 7.3:+1625233 None:intergenic
ATTATATATCTGACATAATC+CGG 0.451030 7.3:+1624774 None:intergenic
CCTCGTTGGGCTAATTCTGC+TGG 0.453275 7.3:+1623744 None:intergenic
CAGAGAGTGAGTGGTCTCAT+TGG 0.455448 7.3:-1624918 MS.gene050586:CDS
CAAGGACCCTACAATGGACT+TGG 0.456753 7.3:-1623410 MS.gene050586:CDS
AACGGGGAAAGATTGCTTGT+TGG 0.457936 7.3:-1625203 MS.gene050586:CDS
GCATAGCCCAAGTCCATTGT+AGG 0.458058 7.3:+1623403 None:intergenic
TAGCCCAACGAGGCACAAAT+GGG 0.458650 7.3:-1623734 MS.gene050586:CDS
CATAATCCGGTAAATTGTAT+TGG 0.459599 7.3:+1624787 None:intergenic
GTGACAGGAACTGGTCCAAT+TGG 0.469779 7.3:-1623774 MS.gene050586:CDS
TATCAGAGACTATACGATCT+TGG 0.471453 7.3:-1623813 MS.gene050586:intron
TCTGCTGGAACACAACCAAT+TGG 0.476413 7.3:+1623759 None:intergenic
GATCATATTGATGGTGGCAT+TGG 0.489406 7.3:-1625713 MS.gene050586:CDS
GCATTAGTACTCATCACTCT+TGG 0.489433 7.3:-1624864 MS.gene050586:CDS
TTATCTTAACTGATAAAGTC+AGG 0.489894 7.3:+1625514 None:intergenic
TAGTGTAGTTACCATATGCT+TGG 0.491230 7.3:+1623565 None:intergenic
TGCATTCCATCCATCTGAAA+AGG 0.500058 7.3:-1623330 MS.gene050586:CDS
AGGGTGATAGTGACAGGAAC+TGG 0.502345 7.3:-1623783 MS.gene050586:CDS
ATCATATTGATGGTGGCATT+GGG 0.506068 7.3:-1625712 MS.gene050586:CDS
TATCCAACTCGCAGACCCAC+TGG 0.509258 7.3:-1625562 MS.gene050586:CDS
TGGCGTGATCTTGCAGAGAA+TGG 0.511244 7.3:+1624807 None:intergenic
TGCAGGATTTGTTACATCAC+AGG 0.514441 7.3:-1623447 MS.gene050586:intron
CGTCCAGTGGGTCTGCGAGT+TGG 0.515271 7.3:+1625559 None:intergenic
CAATGTAGTGATCATATTGA+TGG 0.516090 7.3:-1625722 MS.gene050586:CDS
ATTGGTTCAAATGTATTCAT+GGG 0.520468 7.3:-1623630 MS.gene050586:CDS
AAGGGCCATCTGCCTTGTGT+TGG 0.528064 7.3:+1623605 None:intergenic
CAAAACCATAGTGGCAGACA+TGG 0.531076 7.3:+1625759 None:intergenic
GCACGTAGGGTGATAGTGAC+AGG 0.541987 7.3:-1623789 MS.gene050586:CDS
GTTGGATAATCAATGCCATA+AGG 0.544090 7.3:+1625577 None:intergenic
ATTGGAATTCTCAATGATAC+CGG 0.545783 7.3:-1625158 MS.gene050586:CDS
CAGGTAGCATGTTGTGGTCA+AGG 0.547719 7.3:-1623428 MS.gene050586:CDS
GGGGATTATTGACGAAGTCA+AGG 0.550662 7.3:+1623586 None:intergenic
GGGATTATTGACGAAGTCAA+GGG 0.554031 7.3:+1623587 None:intergenic
TTAGTACTCATCACTCTTGG+AGG 0.555068 7.3:-1624861 MS.gene050586:CDS
TGAGACCACTCACTCTCTGC+TGG 0.555778 7.3:+1624922 None:intergenic
GGGAGCCAACACAAGGCAGA+TGG 0.561056 7.3:-1623610 MS.gene050586:CDS
CAAACTCAGAGCTTAGTGAA+TGG 0.565128 7.3:-1624888 MS.gene050586:CDS
TGGATTATTTGAATAAGTTG+TGG 0.570455 7.3:+1623669 None:intergenic
CCCAAAATGCATATTCGTCA+CGG 0.577781 7.3:+1623354 None:intergenic
ATACGATCTTGGAGCACGTA+GGG 0.582644 7.3:-1623802 MS.gene050586:CDS
CATAGCCCAAGTCCATTGTA+GGG 0.588202 7.3:+1623404 None:intergenic
CAATACCAGCAGAGAGTGAG+TGG 0.596408 7.3:-1624927 MS.gene050586:CDS
ATAAGACTGCAAAACCATAG+TGG 0.606330 7.3:+1625750 None:intergenic
GTGTAGTTACCATATGCTTG+GGG 0.609486 7.3:+1623567 None:intergenic
ACATCACAGGTAGCATGTTG+TGG 0.620663 7.3:-1623434 MS.gene050586:CDS
GCCCAACGAGGCACAAATGG+GGG 0.622538 7.3:-1623732 MS.gene050586:CDS
CCATTAGAGAAACGTCCAGT+GGG 0.622708 7.3:+1625547 None:intergenic
TTTAAGCCCTGAACTTAACG+GGG 0.625695 7.3:-1625219 MS.gene050586:CDS
TATTCATGGGAGCCAACACA+AGG 0.646177 7.3:-1623617 MS.gene050586:CDS
TGTGGTCAAGGACCCTACAA+TGG 0.648138 7.3:-1623416 MS.gene050586:CDS
GCCATTAGAGAAACGTCCAG+TGG 0.648287 7.3:+1625546 None:intergenic
AGCCCAACGAGGCACAAATG+GGG 0.652571 7.3:-1623733 MS.gene050586:CDS
AAGGACCCTACAATGGACTT+GGG 0.653866 7.3:-1623409 MS.gene050586:CDS
GGATAATCAATGCCATAAGG+AGG 0.667878 7.3:+1625580 None:intergenic
TTAGGGCATAAATTAGAGAG+TGG 0.679349 7.3:+1623377 None:intergenic
TGTAGTGATCATATTGATGG+TGG 0.697508 7.3:-1625719 MS.gene050586:CDS
TATACGATCTTGGAGCACGT+AGG 0.722293 7.3:-1623803 MS.gene050586:CDS
CCAGCAGAATTAGCCCAACG+AGG 0.739648 7.3:-1623744 MS.gene050586:CDS
AAGTTGTTTCAAAAGCACAG+TGG 0.778633 7.3:-1625689 MS.gene050586:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTCAAATGTTATTATTATA+AGG + chr7.3:1625131-1625150 None:intergenic 10.0%
!! TAAACATAATTAGAATATTT+AGG - chr7.3:1624018-1624037 MS.gene050586:intron 10.0%
!! TATATAGAGTAATTTAATAA+TGG - chr7.3:1625459-1625478 MS.gene050586:intron 10.0%
!! TTCAAATGTTATTATTATAA+GGG + chr7.3:1625130-1625149 None:intergenic 10.0%
!!! ATGTATTACATTTTAATTTA+AGG - chr7.3:1623955-1623974 MS.gene050586:intron 10.0%
!!! TAAGTAAACAAATTATTTTT+AGG - chr7.3:1624417-1624436 MS.gene050586:intron 10.0%
!!! TTTTCTTAGATTATTAAAAA+AGG + chr7.3:1624711-1624730 None:intergenic 10.0%
!! AAATAAATCAAACCAAATAA+TGG + chr7.3:1624332-1624351 None:intergenic 15.0%
!! ATATAAAATGCACATTTAAT+TGG - chr7.3:1624364-1624383 MS.gene050586:intron 15.0%
!! ATATGTTGGAATTATAATAA+GGG - chr7.3:1624978-1624997 MS.gene050586:intron 15.0%
!! TAATGTTAATCACATTATTA+CGG + chr7.3:1623674-1623693 None:intergenic 15.0%
!! TATCATAAAACAAAACAAAA+CGG + chr7.3:1624659-1624678 None:intergenic 15.0%
!! TATTTAATGTATGTTTGAAT+TGG + chr7.3:1623929-1623948 None:intergenic 15.0%
!!! TTAATAAACTTTGTTTATTG+TGG + chr7.3:1624889-1624908 None:intergenic 15.0%
!! AATGTTAATCACATTATTAC+GGG + chr7.3:1623673-1623692 None:intergenic 20.0%
!! AATTAGAATATTTAGGCAAT+TGG - chr7.3:1624025-1624044 MS.gene050586:intron 20.0%
!! ATATAAAATGCCTCATTTAT+TGG + chr7.3:1624808-1624827 None:intergenic 20.0%
!! ATTATATATCTGACATAATC+CGG + chr7.3:1624215-1624234 None:intergenic 20.0%
!! ATTCATTGGATACATATAAT+CGG + chr7.3:1625721-1625740 None:intergenic 20.0%
!! GATATGTTGGAATTATAATA+AGG - chr7.3:1624977-1624996 MS.gene050586:intron 20.0%
!! GTCAATTACCATAAATAATT+TGG - chr7.3:1624583-1624602 MS.gene050586:intron 20.0%
!! TAGCATAACTATTAGATTTA+TGG - chr7.3:1625482-1625501 MS.gene050586:intron 20.0%
!! TATAAAATGCCTCATTTATT+GGG + chr7.3:1624807-1624826 None:intergenic 20.0%
!! TTGAGTTACCAAATTATTTA+TGG + chr7.3:1624594-1624613 None:intergenic 20.0%
!!! ATTTGGTTTGATTTATTTCA+AGG - chr7.3:1624334-1624353 MS.gene050586:intron 20.0%
!!! TCATTCAAAATTTCCTTTTT+TGG - chr7.3:1625085-1625104 MS.gene050586:intron 20.0%
!!! TTCAAAAAAATGTGACATTT+TGG + chr7.3:1624763-1624782 None:intergenic 20.0%
!!! TTTGTTTACTTACTTTTTGA+CGG + chr7.3:1624409-1624428 None:intergenic 20.0%
!!! TTTTGTGAATAACTATTACT+TGG - chr7.3:1624154-1624173 MS.gene050586:intron 20.0%
! AAAATGCACATTTAATTGGT+TGG - chr7.3:1624368-1624387 MS.gene050586:intron 25.0%
! AGGAAAAAGACGTATAATAA+AGG + chr7.3:1624299-1624318 None:intergenic 25.0%
! ATAATAAAGGAAGAAAGTGA+TGG + chr7.3:1624286-1624305 None:intergenic 25.0%
! ATCATTGGATATTGATCTAA+TGG - chr7.3:1624501-1624520 MS.gene050586:intron 25.0%
! ATGTTAATCACATTATTACG+GGG + chr7.3:1623672-1623691 None:intergenic 25.0%
! ATTAGATCAATATCCAATGA+TGG + chr7.3:1624502-1624521 None:intergenic 25.0%
! CCAATTTGTAAGTTAAATTC+TGG - chr7.3:1623854-1623873 MS.gene050586:intron 25.0%
! CTAATGTGCACAAATAAATT+AGG + chr7.3:1624557-1624576 None:intergenic 25.0%
! GGATATAAATTAACTTTGCA+TGG + chr7.3:1623650-1623669 None:intergenic 25.0%
! TGATGCAAAATTTGCAATAT+TGG + chr7.3:1624464-1624483 None:intergenic 25.0%
! TGGATTATTTGAATAAGTTG+TGG + chr7.3:1625320-1625339 None:intergenic 25.0%
! TTAACTTACAAATTGGATTC+CGG + chr7.3:1623850-1623869 None:intergenic 25.0%
! TTATCTTAACTGATAAAGTC+AGG + chr7.3:1623475-1623494 None:intergenic 25.0%
! TTTATTAAGATGCACTTCAA+TGG - chr7.3:1624901-1624920 MS.gene050586:CDS 25.0%
!! AAATAATTTGGTAACTCAAG+TGG - chr7.3:1624595-1624614 MS.gene050586:intron 25.0%
!! AATAATTTGGTAACTCAAGT+GGG - chr7.3:1624596-1624615 MS.gene050586:intron 25.0%
!! AATTGGTTCAAATGTATTCA+TGG - chr7.3:1625355-1625374 MS.gene050586:intron 25.0%
!! ATTGGTTCAAATGTATTCAT+GGG - chr7.3:1625356-1625375 MS.gene050586:intron 25.0%
!! ATTTTATGCAATGATTTTGC+AGG - chr7.3:1623711-1623730 MS.gene050586:CDS 25.0%
!! CCAGAATTTAACTTACAAAT+TGG + chr7.3:1623857-1623876 None:intergenic 25.0%
!! CCTTCTTATAAAAAAAGTAC+TGG - chr7.3:1625513-1625532 MS.gene050586:intron 25.0%
!! TGAGTATAAGAAGATTTTGA+GGG - chr7.3:1624238-1624257 MS.gene050586:intron 25.0%
!! TTTATTATACGTCTTTTTCC+TGG - chr7.3:1624298-1624317 MS.gene050586:intron 25.0%
!!! ATGTCACATTTTTTTGAAGT+AGG - chr7.3:1624765-1624784 MS.gene050586:CDS 25.0%
!!! CCAGTACTTTTTTTATAAGA+AGG + chr7.3:1625516-1625535 None:intergenic 25.0%
!!! TCAAAATTTCCTTTTTTGGA+GGG - chr7.3:1625089-1625108 MS.gene050586:intron 25.0%
!!! TTCAAAATTTCCTTTTTTGG+AGG - chr7.3:1625088-1625107 MS.gene050586:intron 25.0%
AAGCAATTAATCTACAGACA+AGG + chr7.3:1624625-1624644 None:intergenic 30.0%
AATGTATGTTTGAATTGGAC+CGG + chr7.3:1623924-1623943 None:intergenic 30.0%
AGCAATTAATCTACAGACAA+GGG + chr7.3:1624624-1624643 None:intergenic 30.0%
ATTGGAATTCTCAATGATAC+CGG - chr7.3:1623828-1623847 MS.gene050586:intron 30.0%
CAACAACTCAACAATGAAAT+TGG - chr7.3:1625338-1625357 MS.gene050586:intron 30.0%
CAATGTAGTGATCATATTGA+TGG - chr7.3:1623264-1623283 MS.gene050586:CDS 30.0%
CATAATCCGGTAAATTGTAT+TGG + chr7.3:1624202-1624221 None:intergenic 30.0%
GTAGGAAATATATGTGTGTT+TGG - chr7.3:1624523-1624542 MS.gene050586:intron 30.0%
TATTTAAGCCCTGAACTTAA+CGG - chr7.3:1623765-1623784 MS.gene050586:CDS 30.0%
TGTTAATCACATTATTACGG+GGG + chr7.3:1623671-1623690 None:intergenic 30.0%
TTAAGTTCAGGGCTTAAATA+AGG + chr7.3:1623765-1623784 None:intergenic 30.0%
TTGGATATTGATCTAATGGT+AGG - chr7.3:1624505-1624524 MS.gene050586:intron 30.0%
! ATTGTTCAACAGATTTTGTC+AGG - chr7.3:1625690-1625709 MS.gene050586:CDS 30.0%
! CAATTTCATTGTTGAGTTGT+TGG + chr7.3:1625340-1625359 None:intergenic 30.0%
! CTGAGTATAAGAAGATTTTG+AGG - chr7.3:1624237-1624256 MS.gene050586:intron 30.0%
!! AAAAAAAGTACTGGTTATGC+AGG - chr7.3:1625522-1625541 MS.gene050586:intron 30.0%
!! GTAGTGTATGTTTGTTATCA+TGG - chr7.3:1624839-1624858 MS.gene050586:CDS 30.0%
!! TAGAGTGTTGATTGATATGT+TGG - chr7.3:1624964-1624983 MS.gene050586:CDS 30.0%
!!! CACAACATTTTTTCCATCAT+TGG - chr7.3:1624486-1624505 MS.gene050586:intron 30.0%
AGTGTAGTTACCATATGCTT+GGG + chr7.3:1625423-1625442 None:intergenic 35.0%
ATAAGACTGCAAAACCATAG+TGG + chr7.3:1623239-1623258 None:intergenic 35.0%
ATCACGCCAATACAATTTAC+CGG - chr7.3:1624193-1624212 MS.gene050586:intron 35.0%
ATTATAAGGGTCCTGTTAAC+CGG + chr7.3:1625117-1625136 None:intergenic 35.0%
ATTTAAGCCCTGAACTTAAC+GGG - chr7.3:1623766-1623785 MS.gene050586:CDS 35.0%
GCAATTAATCTACAGACAAG+GGG + chr7.3:1624623-1624642 None:intergenic 35.0%
GTTGGATAATCAATGCCATA+AGG + chr7.3:1623412-1623431 None:intergenic 35.0%
TAGTGTAGTTACCATATGCT+TGG + chr7.3:1625424-1625443 None:intergenic 35.0%
TATCAGAGACTATACGATCT+TGG - chr7.3:1625173-1625192 MS.gene050586:CDS 35.0%
TCCACATTTCCCAATAAATG+AGG - chr7.3:1624795-1624814 MS.gene050586:CDS 35.0%
TGTAGTGATCATATTGATGG+TGG - chr7.3:1623267-1623286 MS.gene050586:CDS 35.0%
TTAGGGCATAAATTAGAGAG+TGG + chr7.3:1625612-1625631 None:intergenic 35.0%
TTTGCATGGTTACTAAGTGA+GGG + chr7.3:1623636-1623655 None:intergenic 35.0%
! AAAACAGTGCTGAGATTCAT+TGG + chr7.3:1625735-1625754 None:intergenic 35.0%
! AAGTTGTTTCAAAAGCACAG+TGG - chr7.3:1623297-1623316 MS.gene050586:CDS 35.0%
! GGTGATTCTCTTGTTGATAA+TGG - chr7.3:1623343-1623362 MS.gene050586:CDS 35.0%
! TGGAATTATAATAAGGGCAC+TGG - chr7.3:1624984-1625003 MS.gene050586:intron 35.0%
! TGTGATTTTGTCAAACTCAC+CGG - chr7.3:1623902-1623921 MS.gene050586:intron 35.0%
! TTTGGTGCACAAATAGAGAA+GGG + chr7.3:1624745-1624764 None:intergenic 35.0%
!! ACAAATAGAGAAGGGTACTT+GGG + chr7.3:1624737-1624756 None:intergenic 35.0%
!! ATCATATTGATGGTGGCATT+GGG - chr7.3:1623274-1623293 MS.gene050586:CDS 35.0%
!! TATAATAAGGGCACTGGTTA+AGG - chr7.3:1624990-1625009 MS.gene050586:intron 35.0%
!! TTGGTTGGTAGTATCAATCA+TGG - chr7.3:1624383-1624402 MS.gene050586:intron 35.0%
!! TTTTGGTGCACAAATAGAGA+AGG + chr7.3:1624746-1624765 None:intergenic 35.0%
!!! CTATGTGTTTTTGGAATCCA+AGG + chr7.3:1625760-1625779 None:intergenic 35.0%
AATCTTTCCCCGTTAAGTTC+AGG + chr7.3:1623777-1623796 None:intergenic 40.0%
AATGCATATTCGTCACGGTT+AGG + chr7.3:1625630-1625649 None:intergenic 40.0%
AATGCCAGCAGAAGCAAAAT+TGG + chr7.3:1623811-1623830 None:intergenic 40.0%
AGTTAAGACGTGTGAGAAGT+AGG + chr7.3:1623613-1623632 None:intergenic 40.0%
ATCTTTCCCCGTTAAGTTCA+GGG + chr7.3:1623776-1623795 None:intergenic 40.0%
ATGCATATTCGTCACGGTTA+GGG + chr7.3:1625629-1625648 None:intergenic 40.0%
CAAACTCAGAGCTTAGTGAA+TGG - chr7.3:1624098-1624117 MS.gene050586:intron 40.0%
CAACGTGCTTTCTTTGTGTT+TGG - chr7.3:1623322-1623341 MS.gene050586:CDS 40.0%
CCCAAAATGCATATTCGTCA+CGG + chr7.3:1625635-1625654 None:intergenic 40.0%
CTGGCATGTGATCCATTATT+TGG - chr7.3:1624317-1624336 MS.gene050586:intron 40.0%
CTTTGCATGGTTACTAAGTG+AGG + chr7.3:1623637-1623656 None:intergenic 40.0%
GCATTAGTACTCATCACTCT+TGG - chr7.3:1624122-1624141 MS.gene050586:intron 40.0%
GCCTCATTTATTGGGAAATG+TGG + chr7.3:1624799-1624818 None:intergenic 40.0%
GGATAATCAATGCCATAAGG+AGG + chr7.3:1623409-1623428 None:intergenic 40.0%
GGGATTATTGACGAAGTCAA+GGG + chr7.3:1625402-1625421 None:intergenic 40.0%
GGGCTTAAATAAGGCAAAGT+TGG + chr7.3:1623756-1623775 None:intergenic 40.0%
GTCAATAATCCCCAAGCATA+TGG - chr7.3:1625410-1625429 MS.gene050586:intron 40.0%
GTGTAGTTACCATATGCTTG+GGG + chr7.3:1625422-1625441 None:intergenic 40.0%
TGCATTCCATCCATCTGAAA+AGG - chr7.3:1625656-1625675 MS.gene050586:CDS 40.0%
TTAGTACTCATCACTCTTGG+AGG - chr7.3:1624125-1624144 MS.gene050586:intron 40.0%
TTTAAGCCCTGAACTTAACG+GGG - chr7.3:1623767-1623786 MS.gene050586:CDS 40.0%
! AATTTTGCTTCTGCTGGCAT+TGG - chr7.3:1623810-1623829 MS.gene050586:CDS 40.0%
! ACCGTGACGAATATGCATTT+TGG - chr7.3:1625631-1625650 MS.gene050586:CDS 40.0%
! ATTTTGCAGGTCAAGCACTT+GGG - chr7.3:1623724-1623743 MS.gene050586:CDS 40.0%
! CCGTGACGAATATGCATTTT+GGG - chr7.3:1625632-1625651 MS.gene050586:CDS 40.0%
!! ACTAAGCTCTGAGTTTGTTC+AGG + chr7.3:1624095-1624114 None:intergenic 40.0%
!! CAAATAATGGATCACATGCC+AGG + chr7.3:1624319-1624338 None:intergenic 40.0%
!! CACAAATAGAGAAGGGTACT+TGG + chr7.3:1624738-1624757 None:intergenic 40.0%
!! GATCATATTGATGGTGGCAT+TGG - chr7.3:1623273-1623292 MS.gene050586:CDS 40.0%
!! TGCAGGATTTGTTACATCAC+AGG - chr7.3:1625539-1625558 MS.gene050586:CDS 40.0%
!!! AAGCTGTTAGCCTTTTCAGA+TGG + chr7.3:1625669-1625688 None:intergenic 40.0%
!!! TGTTAGCCTTTTCAGATGGA+TGG + chr7.3:1625665-1625684 None:intergenic 40.0%
AACGGGGAAAGATTGCTTGT+TGG - chr7.3:1623783-1623802 MS.gene050586:CDS 45.0%
ACATCACAGGTAGCATGTTG+TGG - chr7.3:1625552-1625571 MS.gene050586:CDS 45.0%
ATACGATCTTGGAGCACGTA+GGG - chr7.3:1625184-1625203 MS.gene050586:CDS 45.0%
CATAGCCCAAGTCCATTGTA+GGG + chr7.3:1625585-1625604 None:intergenic 45.0%
CCATTAGAGAAACGTCCAGT+GGG + chr7.3:1623442-1623461 None:intergenic 45.0%
GGGGATTATTGACGAAGTCA+AGG + chr7.3:1625403-1625422 None:intergenic 45.0%
TATACGATCTTGGAGCACGT+AGG - chr7.3:1625183-1625202 MS.gene050586:CDS 45.0%
TATTCATGGGAGCCAACACA+AGG - chr7.3:1625369-1625388 MS.gene050586:intron 45.0%
TCTGCTGGAACACAACCAAT+TGG + chr7.3:1625230-1625249 None:intergenic 45.0%
! AAGGACCCTACAATGGACTT+GGG - chr7.3:1625577-1625596 MS.gene050586:CDS 45.0%
! GATTTTGCAGGTCAAGCACT+TGG - chr7.3:1623723-1623742 MS.gene050586:CDS 45.0%
! TTTTGCAGGTCAAGCACTTG+GGG - chr7.3:1623725-1623744 MS.gene050586:CDS 45.0%
!!! TCTCAGCACTGTTTTAGCCT+TGG - chr7.3:1625740-1625759 MS.gene050586:CDS 45.0%
!!! TTTCCTTTTTTGGAGGGCAC+CGG - chr7.3:1625095-1625114 MS.gene050586:intron 45.0%
CAATACCAGCAGAGAGTGAG+TGG - chr7.3:1624059-1624078 MS.gene050586:intron 50.0%
CAGAGAGTGAGTGGTCTCAT+TGG - chr7.3:1624068-1624087 MS.gene050586:intron 50.0%
CAGGTAGCATGTTGTGGTCA+AGG - chr7.3:1625558-1625577 MS.gene050586:CDS 50.0%
CCCACTGGACGTTTCTCTAA+TGG - chr7.3:1623439-1623458 MS.gene050586:CDS 50.0%
GCATAGCCCAAGTCCATTGT+AGG + chr7.3:1625586-1625605 None:intergenic 50.0%
GCCATTAGAGAAACGTCCAG+TGG + chr7.3:1623443-1623462 None:intergenic 50.0%
GTGACAGGAACTGGTCCAAT+TGG - chr7.3:1625212-1625231 MS.gene050586:CDS 50.0%
TAACCGGTGCCCTCCAAAAA+AGG + chr7.3:1625101-1625120 None:intergenic 50.0%
TAGCCCAACGAGGCACAAAT+GGG - chr7.3:1625252-1625271 MS.gene050586:CDS 50.0%
TGGCGTGATCTTGCAGAGAA+TGG + chr7.3:1624182-1624201 None:intergenic 50.0%
TGTGGTCAAGGACCCTACAA+TGG - chr7.3:1625570-1625589 MS.gene050586:CDS 50.0%
TTAGCCCAACGAGGCACAAA+TGG - chr7.3:1625251-1625270 MS.gene050586:CDS 50.0%
! AGGGTGATAGTGACAGGAAC+TGG - chr7.3:1625203-1625222 MS.gene050586:CDS 50.0%
! CAAGGACCCTACAATGGACT+TGG - chr7.3:1625576-1625595 MS.gene050586:CDS 50.0%
! GGTGCCAATTTTGCTTCTGC+TGG - chr7.3:1623804-1623823 MS.gene050586:CDS 50.0%
AAGGGCCATCTGCCTTGTGT+TGG + chr7.3:1625384-1625403 None:intergenic 55.0%
AGCCCAACGAGGCACAAATG+GGG - chr7.3:1625253-1625272 MS.gene050586:CDS 55.0%
ATCCCCCATTTGTGCCTCGT+TGG + chr7.3:1625259-1625278 None:intergenic 55.0%
CCAGCAGAATTAGCCCAACG+AGG - chr7.3:1625242-1625261 MS.gene050586:CDS 55.0%
CCTCGTTGGGCTAATTCTGC+TGG + chr7.3:1625245-1625264 None:intergenic 55.0%
CGAGCTGATGCTCCTCCTTA+TGG - chr7.3:1623394-1623413 MS.gene050586:CDS 55.0%
TATCCAACTCGCAGACCCAC+TGG - chr7.3:1623424-1623443 MS.gene050586:CDS 55.0%
TCCCCCATTTGTGCCTCGTT+GGG + chr7.3:1625258-1625277 None:intergenic 55.0%
TGAGACCACTCACTCTCTGC+TGG + chr7.3:1624067-1624086 None:intergenic 55.0%
! GCACGTAGGGTGATAGTGAC+AGG - chr7.3:1625197-1625216 MS.gene050586:CDS 55.0%
!! TTTGGAGGGCACCGGTTAAC+AGG - chr7.3:1625103-1625122 MS.gene050586:intron 55.0%
GCCCAACGAGGCACAAATGG+GGG - chr7.3:1625254-1625273 MS.gene050586:CDS 60.0%
GGGAGCCAACACAAGGCAGA+TGG - chr7.3:1625376-1625395 MS.gene050586:intron 60.0%
CGTCCAGTGGGTCTGCGAGT+TGG + chr7.3:1623430-1623449 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 1623229 1625779 1623229 ID=MS.gene050586
chr7.3 mRNA 1623229 1625779 1623229 ID=MS.gene050586.t1;Parent=MS.gene050586
chr7.3 exon 1625524 1625779 1625524 ID=MS.gene050586.t1.exon1;Parent=MS.gene050586.t1
chr7.3 CDS 1625524 1625779 1625524 ID=cds.MS.gene050586.t1;Parent=MS.gene050586.t1
chr7.3 exon 1625148 1625275 1625148 ID=MS.gene050586.t1.exon2;Parent=MS.gene050586.t1
chr7.3 CDS 1625148 1625275 1625148 ID=cds.MS.gene050586.t1;Parent=MS.gene050586.t1
chr7.3 exon 1624749 1624991 1624749 ID=MS.gene050586.t1.exon3;Parent=MS.gene050586.t1
chr7.3 CDS 1624749 1624991 1624749 ID=cds.MS.gene050586.t1;Parent=MS.gene050586.t1
chr7.3 exon 1623577 1623829 1623577 ID=MS.gene050586.t1.exon4;Parent=MS.gene050586.t1
chr7.3 CDS 1623577 1623829 1623577 ID=cds.MS.gene050586.t1;Parent=MS.gene050586.t1
chr7.3 exon 1623229 1623464 1623229 ID=MS.gene050586.t1.exon5;Parent=MS.gene050586.t1
chr7.3 CDS 1623229 1623464 1623229 ID=cds.MS.gene050586.t1;Parent=MS.gene050586.t1
Gene Sequence

>MS.gene050586

ATGTCTGCCACTATGGTTTTGCAGTCTTATTACATCAATGTAGTGATCATATTGATGGTGGCATTGGGAAGTTGTTTCAAAAGCACAGTGGCACAACGTGCTTTCTTTGTGTTTGGTGATTCTCTTGTTGATAATGGTAACAACAATTACTTAGCAACTACAGCTCGAGCTGATGCTCCTCCTTATGGCATTGATTATCCAACTCGCAGACCCACTGGACGTTTCTCTAATGGCTACAACATTCCTGACTTTATCAGTTAAGATAATCTTTCATTTCTCTCTCATTCTATTTTTCGCAAATAATAACGTGTTTTCTTTTATTTTAAACGAAAAATGTTAGTATTGTTATTTCTATGTTGAGAGTGAAGATCGAATCTTCGACCTACTTCTCACACGTCTTAACTCCCTCACTTAGTAACCATGCAAAGTTAATTTATATCCCCCGTAATAATGTGATTAACATTAAACTTATATAGTTTTTTATTTTATGCAATGATTTTGCAGGTCAAGCACTTGGGGCAGAACCAACTTTGCCTTATTTAAGCCCTGAACTTAACGGGGAAAGATTGCTTGTTGGTGCCAATTTTGCTTCTGCTGGCATTGGAATTCTCAATGATACCGGAATCCAATTTGTAAGTTAAATTCTGGTCTTAGTATATTTTTAAATTGACATTGTGATTTTGTCAAACTCACCGGTCCAATTCAAACATACATTAAATATGTCAAATGTATTACATTTTAATTTAAGGTTGATTAATTTTAATTGACATTGTTACAAATAATTGCAGATAAACATAATTAGAATATTTAGGCAATTGGAGTATTTTCAACAATACCAGCAGAGAGTGAGTGGTCTCATTGGACCTGAACAAACTCAGAGCTTAGTGAATGGAGCATTAGTACTCATCACTCTTGGAGGCAATGATTTTGTGAATAACTATTACTTGGTGCCATTCTCTGCAAGATCACGCCAATACAATTTACCGGATTATGTCAGATATATAATATCTGAGTATAAGAAGATTTTGAGGGTAAATTACTCTCTTTAATCATTCCATCACTTTCTTCCTTTATTATACGTCTTTTTCCTGGCATGTGATCCATTATTTGGTTTGATTTATTTCAAGGTCAAATTATATAAAATGCACATTTAATTGGTTGGTAGTATCAATCATGGCCGTCAAAAAGTAAGTAAACAAATTATTTTTAGGCAAAAAGTAACAATTTACAGACCAATATTGCAAATTTTGCATCATGCACAACATTTTTTCCATCATTGGATATTGATCTAATGGTAGGAAATATATGTGTGTTTGGTGTGTACGCCTAATTTATTTGTGCACATTAGACATTCGTCAATTACCATAAATAATTTGGTAACTCAAGTGGGTCCCCTTGTCTGTAGATTAATTGCTTTTTTTTCTTCTCCGTTTTGTTTTGTTTTATGATAAAGAAGTGTTATTTTTCTTTCATATCATACCTTTTTTAATAATCTAAGAAAAATACCCAAGTACCCTTCTCTATTTGTGCACCAAAATGTCACATTTTTTTGAAGTAGGATGAATTTCCACATTTCCCAATAAATGAGGCATTTTATATGTAATGTCAGTGTAGTGTATGTTTGTTATCATGGTAGATATGATAGAATCACGACGAACCACAATAAACAAAGTTTATTAAGATGCACTTCAATGGAAGTAACTATAGTTTTTTTTTTTTATATGAAGTAGCTAGCTAGAGTGTTGATTGATATGTTGGAATTATAATAAGGGCACTGGTTAAGGAAGTAAATATAGTAGTTTTTGTATCAGAAACTGTGTAATTAATTTTCTCAAAAATCAAAAAAGTGTTGTTTTTCATTCAAAATTTCCTTTTTTGGAGGGCACCGGTTAACAGGACCCTTATAATAATAACATTTGAATTTTGAAATATTGTGATGTATAATATCAGAGACTATACGATCTTGGAGCACGTAGGGTGATAGTGACAGGAACTGGTCCAATTGGTTGTGTTCCAGCAGAATTAGCCCAACGAGGCACAAATGGGGGATGCTCAGTTGAGCTACAACGTGCAGCAGCTTTGTTCAATCCACAACTTATTCAAATAATCCAACAACTCAACAATGAAATTGGTTCAAATGTATTCATGGGAGCCAACACAAGGCAGATGGCCCTTGACTTCGTCAATAATCCCCAAGCATATGGTAACTACACTAATCATATTCATATGATATATAGAGTAATTTAATAATGGTAGCATAACTATTAGATTTATGGTAATATTACCTTCTTATAAAAAAAGTACTGGTTATGCAGGATTTGTTACATCACAGGTAGCATGTTGTGGTCAAGGACCCTACAATGGACTTGGGCTATGCACACCACTCTCTAATTTATGCCCTAACCGTGACGAATATGCATTTTGGGATGCATTCCATCCATCTGAAAAGGCTAACAGCTTGATTGTTCAACAGATTTTGTCAGGCACAACCGATTATATGTATCCAATGAATCTCAGCACTGTTTTAGCCTTGGATTCCAAAAACACATAG

Protein sequence

>MS.gene050586.t1

MSATMVLQSYYINVVIILMVALGSCFKSTVAQRAFFVFGDSLVDNGNNNYLATTARADAPPYGIDYPTRRPTGRFSNGYNIPDFISQALGAEPTLPYLSPELNGERLLVGANFASAGIGILNDTGIQFINIIRIFRQLEYFQQYQQRVSGLIGPEQTQSLVNGALVLITLGGNDFVNNYYLVPFSARSRQYNLPDYVRYIISEYKKILRRLYDLGARRVIVTGTGPIGCVPAELAQRGTNGGCSVELQRAAALFNPQLIQIIQQLNNEIGSNVFMGANTRQMALDFVNNPQAYGFVTSQVACCGQGPYNGLGLCTPLSNLCPNRDEYAFWDAFHPSEKANSLIVQQILSGTTDYMYPMNLSTVLALDSKNT