Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074408.t1 | XP_013461074.1 | 92.5 | 252 | 14 | 2 | 1 | 247 | 1 | 252 | 2.10E-112 | 415.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074408.t1 | Q9ZVD2 | 49.8 | 261 | 117 | 2 | 1 | 248 | 1 | 260 | 7.4e-66 | 251.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074408.t1 | A0A072V156 | 92.5 | 252 | 14 | 2 | 1 | 247 | 1 | 252 | 1.5e-112 | 415.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052083 | MS.gene074408 | 0.815831 | 7.56E-52 | -1.69E-46 |
| MS.gene053547 | MS.gene074408 | 0.810746 | 9.89E-51 | -1.69E-46 |
| MS.gene055478 | MS.gene074408 | 0.816322 | 5.87E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074408.t1 | MTR_3g078800 | 91.270 | 252 | 17 | 1 | 1 | 247 | 1 | 252 | 5.88e-151 | 421 |
| MS.gene074408.t1 | MTR_5g087760 | 63.281 | 256 | 85 | 3 | 1 | 248 | 1 | 255 | 8.65e-119 | 339 |
| MS.gene074408.t1 | MTR_2g012550 | 49.615 | 260 | 109 | 5 | 1 | 241 | 1 | 257 | 1.03e-79 | 241 |
| MS.gene074408.t1 | MTR_3g078810 | 68.493 | 146 | 44 | 2 | 104 | 247 | 1 | 146 | 1.21e-68 | 208 |
| MS.gene074408.t1 | MTR_3g078820 | 56.784 | 199 | 84 | 2 | 43 | 241 | 4 | 200 | 5.01e-65 | 201 |
| MS.gene074408.t1 | MTR_1g077560 | 32.669 | 251 | 158 | 5 | 3 | 249 | 7 | 250 | 2.15e-34 | 124 |
| MS.gene074408.t1 | MTR_5g076170 | 31.818 | 264 | 162 | 6 | 1 | 247 | 1 | 263 | 1.41e-33 | 122 |
| MS.gene074408.t1 | MTR_3g063310 | 36.782 | 174 | 99 | 3 | 81 | 249 | 85 | 252 | 4.83e-30 | 112 |
| MS.gene074408.t1 | MTR_3g074150 | 27.876 | 226 | 142 | 7 | 13 | 230 | 16 | 228 | 2.11e-26 | 103 |
| MS.gene074408.t1 | MTR_8g090320 | 28.755 | 233 | 142 | 8 | 24 | 248 | 43 | 259 | 4.59e-23 | 94.7 |
| MS.gene074408.t1 | MTR_3g104460 | 28.358 | 201 | 131 | 6 | 57 | 247 | 56 | 253 | 1.92e-19 | 85.1 |
| MS.gene074408.t1 | MTR_4g119428 | 30.918 | 207 | 119 | 6 | 38 | 227 | 17 | 216 | 5.03e-19 | 83.6 |
| MS.gene074408.t1 | MTR_2g100060 | 27.473 | 182 | 120 | 4 | 77 | 248 | 77 | 256 | 1.18e-17 | 80.1 |
| MS.gene074408.t1 | MTR_2g090225 | 26.699 | 206 | 147 | 3 | 44 | 247 | 17 | 220 | 3.35e-16 | 75.5 |
| MS.gene074408.t1 | MTR_7g106000 | 25.463 | 216 | 148 | 7 | 36 | 245 | 18 | 226 | 4.12e-16 | 75.1 |
| MS.gene074408.t1 | MTR_2g011350 | 27.027 | 148 | 106 | 2 | 76 | 223 | 35 | 180 | 1.13e-14 | 70.9 |
| MS.gene074408.t1 | MTR_7g105970 | 27.717 | 184 | 120 | 7 | 51 | 227 | 29 | 206 | 9.19e-14 | 68.9 |
| MS.gene074408.t1 | MTR_1g057270 | 25.568 | 176 | 120 | 4 | 82 | 248 | 74 | 247 | 1.13e-13 | 68.9 |
| MS.gene074408.t1 | MTR_8g016370 | 25.397 | 252 | 143 | 9 | 5 | 248 | 7 | 221 | 1.39e-13 | 68.2 |
| MS.gene074408.t1 | MTR_7g106030 | 28.108 | 185 | 118 | 8 | 52 | 227 | 29 | 207 | 9.94e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074408.t1 | AT2G27080 | 52.107 | 261 | 111 | 2 | 1 | 248 | 1 | 260 | 5.33e-97 | 285 |
| MS.gene074408.t1 | AT2G27080 | 52.107 | 261 | 111 | 2 | 1 | 248 | 1 | 260 | 5.33e-97 | 285 |
| MS.gene074408.t1 | AT5G21130 | 45.852 | 229 | 123 | 1 | 19 | 247 | 53 | 280 | 6.34e-71 | 219 |
| MS.gene074408.t1 | AT5G36970 | 33.205 | 259 | 150 | 9 | 1 | 247 | 1 | 248 | 6.23e-33 | 120 |
| MS.gene074408.t1 | AT1G65690 | 32.245 | 245 | 159 | 4 | 7 | 249 | 13 | 252 | 4.74e-29 | 110 |
| MS.gene074408.t1 | AT1G54540 | 32.540 | 252 | 152 | 7 | 1 | 247 | 1 | 239 | 2.95e-28 | 108 |
| MS.gene074408.t1 | AT2G35980 | 32.461 | 191 | 121 | 6 | 36 | 224 | 16 | 200 | 9.77e-24 | 95.9 |
| MS.gene074408.t1 | AT2G22180 | 27.542 | 236 | 141 | 8 | 19 | 245 | 75 | 289 | 1.21e-20 | 89.0 |
| MS.gene074408.t1 | AT3G11650 | 27.228 | 202 | 129 | 5 | 36 | 224 | 17 | 213 | 4.47e-17 | 78.2 |
| MS.gene074408.t1 | AT5G22870 | 25.405 | 185 | 126 | 4 | 62 | 241 | 26 | 203 | 1.44e-16 | 76.3 |
| MS.gene074408.t1 | AT5G06320 | 30.000 | 170 | 113 | 5 | 61 | 227 | 44 | 210 | 3.76e-16 | 75.5 |
| MS.gene074408.t1 | AT5G11890 | 28.866 | 194 | 129 | 4 | 39 | 224 | 60 | 252 | 1.24e-11 | 63.5 |
| MS.gene074408.t1 | AT1G17620 | 29.258 | 229 | 152 | 6 | 3 | 224 | 4 | 229 | 1.28e-11 | 63.5 |
| MS.gene074408.t1 | AT4G09590 | 24.468 | 188 | 138 | 3 | 60 | 247 | 20 | 203 | 2.53e-11 | 61.6 |
| MS.gene074408.t1 | AT3G52470 | 24.444 | 180 | 133 | 2 | 68 | 247 | 24 | 200 | 6.20e-11 | 60.8 |
| MS.gene074408.t1 | AT5G53730 | 26.351 | 148 | 98 | 5 | 82 | 223 | 44 | 186 | 7.60e-11 | 60.5 |
Find 67 sgRNAs with CRISPR-Local
Find 73 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGCTGTTGCTGTCTTTGC+TGG | 0.303551 | 3.4:+75327052 | MS.gene074408:CDS |
| ATGCGGTAGGTTTGATCCTT+GGG | 0.329031 | 3.4:-75326967 | None:intergenic |
| GTAGTTATGAATTTGATCTT+TGG | 0.333495 | 3.4:+75327604 | MS.gene074408:CDS |
| ATTGTGTATTTCGGTGCTTC+CGG | 0.342584 | 3.4:-75327147 | None:intergenic |
| TTGGAAGGTGGAGAGGCGTT+AGG | 0.343094 | 3.4:-75326901 | None:intergenic |
| GACGTGGAAGGTTAGAGTTA+AGG | 0.387882 | 3.4:+75327521 | MS.gene074408:CDS |
| AGGTTTGATCCTTGGGGAGC+TGG | 0.388163 | 3.4:-75326960 | None:intergenic |
| GTGCTCATGGCCATCGCTGC+CGG | 0.415051 | 3.4:+75327102 | MS.gene074408:CDS |
| CGGCGGCGATGGAGCGGTGT+TGG | 0.430905 | 3.4:-75326920 | None:intergenic |
| GATGCGGTAGGTTTGATCCT+TGG | 0.434091 | 3.4:-75326968 | None:intergenic |
| CGGCATTGAACTTGCGAGAT+CGG | 0.437793 | 3.4:+75327401 | MS.gene074408:CDS |
| GCGTAACGTTGTGCATTCTC+TGG | 0.446865 | 3.4:-75326997 | None:intergenic |
| ACCGCTCCATCGCCGCCGTC+CGG | 0.448630 | 3.4:+75326925 | MS.gene074408:CDS |
| TGTTAGGTTCATTCCCTTGA+CGG | 0.454596 | 3.4:-75327181 | None:intergenic |
| ACACGATCGATTGTGTATTT+CGG | 0.457527 | 3.4:-75327156 | None:intergenic |
| TGCTGTCTTTGCTGGTTCAT+CGG | 0.470949 | 3.4:+75327060 | MS.gene074408:CDS |
| AAATAGTAGATAAAGATGTT+AGG | 0.480050 | 3.4:-75327197 | None:intergenic |
| CGTTGTGCATTCTCTGGTGG+TGG | 0.481192 | 3.4:-75326991 | None:intergenic |
| TGGAAGGTGGAGAGGCGTTA+GGG | 0.484091 | 3.4:-75326900 | None:intergenic |
| GTTTCTGTTAAAGCTGATAA+CGG | 0.484250 | 3.4:+75327234 | MS.gene074408:CDS |
| GGCGATGGAGCGGTGTTGGA+AGG | 0.486020 | 3.4:-75326916 | None:intergenic |
| ATTTACTCTGATCGTGCTCA+TGG | 0.493417 | 3.4:+75327089 | MS.gene074408:CDS |
| TCTCTGTAACGGCGTCCTGC+CGG | 0.493799 | 3.4:+75327323 | MS.gene074408:CDS |
| CTCTGGTGGTGGGATGCGGT+AGG | 0.506358 | 3.4:-75326980 | None:intergenic |
| AGCGTTGGTGAATGCGGTTA+CGG | 0.509259 | 3.4:+75327431 | MS.gene074408:CDS |
| GAGCTGGATGACATATGTTC+CGG | 0.509609 | 3.4:-75326944 | None:intergenic |
| GCTCTCAGCTTCAACGTTAA+CGG | 0.515780 | 3.4:-75327465 | None:intergenic |
| CCTCCAACTTTAATCTTCAC+CGG | 0.526185 | 3.4:-75327489 | None:intergenic |
| CATTCTCTGGTGGTGGGATG+CGG | 0.527360 | 3.4:-75326984 | None:intergenic |
| AATCGATCGTGTCTCCGTCA+AGG | 0.528158 | 3.4:+75327167 | MS.gene074408:CDS |
| ATCGATCGTGTCTCCGTCAA+GGG | 0.528651 | 3.4:+75327168 | MS.gene074408:CDS |
| ACGGCTGATAAAACGCCGGC+AGG | 0.534301 | 3.4:-75327338 | None:intergenic |
| TATGTTCCGGACGGCGGCGA+TGG | 0.535007 | 3.4:-75326931 | None:intergenic |
| TCTAACGGTGGATCAGTTAA+CGG | 0.540813 | 3.4:+75327554 | MS.gene074408:CDS |
| TCCGGACGGCGGCGATGGAG+CGG | 0.543871 | 3.4:-75326926 | None:intergenic |
| GCACCGGTGAAGATTAAAGT+TGG | 0.544024 | 3.4:+75327486 | MS.gene074408:CDS |
| GGGTGAACACGATCAGCCAT+TGG | 0.548503 | 3.4:-75326880 | None:intergenic |
| GACAGCAACAGCATCCGCAC+CGG | 0.556268 | 3.4:-75327044 | None:intergenic |
| CAGACGGTGTTGAAAGGTAA+CGG | 0.567575 | 3.4:+75327381 | MS.gene074408:CDS |
| GTGTTTCAGACGGTGTTGAA+AGG | 0.576347 | 3.4:+75327375 | MS.gene074408:CDS |
| GGTGGATCAGTTAACGGCGC+AGG | 0.585762 | 3.4:+75327560 | MS.gene074408:CDS |
| TCAGAGAGCGTTGGTGAATG+CGG | 0.587887 | 3.4:+75327425 | MS.gene074408:CDS |
| AACGTTGAAGCTGAGAGCAC+CGG | 0.589685 | 3.4:+75327470 | MS.gene074408:CDS |
| GATGGAGCGGTGTTGGAAGG+TGG | 0.592952 | 3.4:-75326913 | None:intergenic |
| CCGGTGAAGATTAAAGTTGG+AGG | 0.596076 | 3.4:+75327489 | MS.gene074408:CDS |
| AGCGGTGTTGGAAGGTGGAG+AGG | 0.599059 | 3.4:-75326908 | None:intergenic |
| CGCCGCAAAAGTCGCCGGTG+CGG | 0.603490 | 3.4:+75327030 | MS.gene074408:CDS |
| ACACTCGCCGCAAAAGTCGC+CGG | 0.610216 | 3.4:+75327025 | MS.gene074408:CDS |
| TAACGTGACGGTGTTTCAGA+CGG | 0.610689 | 3.4:+75327365 | MS.gene074408:CDS |
| TAAGGTTGACTGTGATCTAA+CGG | 0.613562 | 3.4:+75327539 | MS.gene074408:CDS |
| TTTAACAGAAACATCAAACT+CGG | 0.615677 | 3.4:-75327223 | None:intergenic |
| TGCGGTAGGTTTGATCCTTG+GGG | 0.618357 | 3.4:-75326966 | None:intergenic |
| GCAGGCGAAGATTGTTGACA+AGG | 0.624423 | 3.4:+75327578 | MS.gene074408:CDS |
| AACACCGTCACGTTATTCGA+CGG | 0.636233 | 3.4:-75327357 | None:intergenic |
| GTTGTGCATTCTCTGGTGGT+GGG | 0.643760 | 3.4:-75326990 | None:intergenic |
| TAACGTTGTGCATTCTCTGG+TGG | 0.648494 | 3.4:-75326994 | None:intergenic |
| TTGGAGGATCTGTGAAGACG+TGG | 0.649777 | 3.4:+75327505 | MS.gene074408:CDS |
| TTAACAGAAACATCAAACTC+GGG | 0.650957 | 3.4:-75327222 | None:intergenic |
| GAGATCGGATCAGAGAGCGT+TGG | 0.672799 | 3.4:+75327416 | MS.gene074408:CDS |
| AGAGGCGTTAGTCTCTGTAA+CGG | 0.674629 | 3.4:+75327312 | MS.gene074408:CDS |
| AGGATCTGTGAAGACGTGGA+AGG | 0.675912 | 3.4:+75327509 | MS.gene074408:CDS |
| ATATGTCATCCAGCTCCCCA+AGG | 0.678653 | 3.4:+75326951 | MS.gene074408:CDS |
| ATGACATATGTTCCGGACGG+CGG | 0.681432 | 3.4:-75326937 | None:intergenic |
| TGGATGACATATGTTCCGGA+CGG | 0.702336 | 3.4:-75326940 | None:intergenic |
| TTCGACGGCTGATAAAACGC+CGG | 0.712718 | 3.4:-75327342 | None:intergenic |
| GGTTGACTGTGATCTAACGG+TGG | 0.726582 | 3.4:+75327542 | MS.gene074408:CDS |
| TCAGCCGTCGAATAACGTGA+CGG | 0.740743 | 3.4:+75327353 | MS.gene074408:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAGTAGATAAAGATGTT+AGG | - | chr3.4:75327200-75327219 | None:intergenic | 20.0% |
| ! | GTAGTTATGAATTTGATCTT+TGG | + | chr3.4:75327604-75327623 | MS.gene074408:CDS | 25.0% |
| ! | TTTAACAGAAACATCAAACT+CGG | - | chr3.4:75327226-75327245 | None:intergenic | 25.0% |
| AACGATCAAGTAAAAAACAC+CGG | - | chr3.4:75327124-75327143 | None:intergenic | 30.0% | |
| GTTTCTGTTAAAGCTGATAA+CGG | + | chr3.4:75327234-75327253 | MS.gene074408:CDS | 30.0% | |
| TTAACAGAAACATCAAACTC+GGG | - | chr3.4:75327225-75327244 | None:intergenic | 30.0% | |
| ! | GATAACGGTAACAAAAAGAT+CGG | + | chr3.4:75327249-75327268 | MS.gene074408:CDS | 30.0% |
| ACACGATCGATTGTGTATTT+CGG | - | chr3.4:75327159-75327178 | None:intergenic | 35.0% | |
| TAAGGTTGACTGTGATCTAA+CGG | + | chr3.4:75327539-75327558 | MS.gene074408:CDS | 35.0% | |
| ! | TTTTTACTTGATCGTTCGTC+CGG | + | chr3.4:75327128-75327147 | MS.gene074408:CDS | 35.0% |
| !! | AGCGTTGAAATGTTTTACAG+AGG | + | chr3.4:75327294-75327313 | MS.gene074408:CDS | 35.0% |
| ATTTACTCTGATCGTGCTCA+TGG | + | chr3.4:75327089-75327108 | MS.gene074408:CDS | 40.0% | |
| CCTCCAACTTTAATCTTCAC+CGG | - | chr3.4:75327492-75327511 | None:intergenic | 40.0% | |
| TCTAACGGTGGATCAGTTAA+CGG | + | chr3.4:75327554-75327573 | MS.gene074408:CDS | 40.0% | |
| TGTTAGGTTCATTCCCTTGA+CGG | - | chr3.4:75327184-75327203 | None:intergenic | 40.0% | |
| !! | ATTGTGTATTTCGGTGCTTC+CGG | - | chr3.4:75327150-75327169 | None:intergenic | 40.0% |
| AACACCGTCACGTTATTCGA+CGG | - | chr3.4:75327360-75327379 | None:intergenic | 45.0% | |
| ATGCGGTAGGTTTGATCCTT+GGG | - | chr3.4:75326970-75326989 | None:intergenic | 45.0% | |
| CCGGTGAAGATTAAAGTTGG+AGG | + | chr3.4:75327489-75327508 | MS.gene074408:CDS | 45.0% | |
| GACGTGGAAGGTTAGAGTTA+AGG | + | chr3.4:75327521-75327540 | MS.gene074408:CDS | 45.0% | |
| GAGCTGGATGACATATGTTC+CGG | - | chr3.4:75326947-75326966 | None:intergenic | 45.0% | |
| GCTCTCAGCTTCAACGTTAA+CGG | - | chr3.4:75327468-75327487 | None:intergenic | 45.0% | |
| TAACGTGACGGTGTTTCAGA+CGG | + | chr3.4:75327365-75327384 | MS.gene074408:CDS | 45.0% | |
| TAACGTTGTGCATTCTCTGG+TGG | - | chr3.4:75326997-75327016 | None:intergenic | 45.0% | |
| TGGATGACATATGTTCCGGA+CGG | - | chr3.4:75326943-75326962 | None:intergenic | 45.0% | |
| ! | CAGACGGTGTTGAAAGGTAA+CGG | + | chr3.4:75327381-75327400 | MS.gene074408:CDS | 45.0% |
| ! | GCACCGGTGAAGATTAAAGT+TGG | + | chr3.4:75327486-75327505 | MS.gene074408:CDS | 45.0% |
| ! | GTGTTTCAGACGGTGTTGAA+AGG | + | chr3.4:75327375-75327394 | MS.gene074408:CDS | 45.0% |
| !! | AGAGGCGTTAGTCTCTGTAA+CGG | + | chr3.4:75327312-75327331 | MS.gene074408:CDS | 45.0% |
| !! | TGCTGTCTTTGCTGGTTCAT+CGG | + | chr3.4:75327060-75327079 | MS.gene074408:CDS | 45.0% |
| AATCGATCGTGTCTCCGTCA+AGG | + | chr3.4:75327167-75327186 | MS.gene074408:CDS | 50.0% | |
| AGGATCTGTGAAGACGTGGA+AGG | + | chr3.4:75327509-75327528 | MS.gene074408:CDS | 50.0% | |
| ATATGTCATCCAGCTCCCCA+AGG | + | chr3.4:75326951-75326970 | MS.gene074408:CDS | 50.0% | |
| ATCGATCGTGTCTCCGTCAA+GGG | + | chr3.4:75327168-75327187 | MS.gene074408:CDS | 50.0% | |
| ATGACATATGTTCCGGACGG+CGG | - | chr3.4:75326940-75326959 | None:intergenic | 50.0% | |
| GATGCGGTAGGTTTGATCCT+TGG | - | chr3.4:75326971-75326990 | None:intergenic | 50.0% | |
| GATGCTGTTGCTGTCTTTGC+TGG | + | chr3.4:75327052-75327071 | MS.gene074408:CDS | 50.0% | |
| GCAGGCGAAGATTGTTGACA+AGG | + | chr3.4:75327578-75327597 | MS.gene074408:CDS | 50.0% | |
| GCGTAACGTTGTGCATTCTC+TGG | - | chr3.4:75327000-75327019 | None:intergenic | 50.0% | |
| GGTTGACTGTGATCTAACGG+TGG | + | chr3.4:75327542-75327561 | MS.gene074408:CDS | 50.0% | |
| GTAAAAAACACCGGCAGCGA+TGG | - | chr3.4:75327115-75327134 | None:intergenic | 50.0% | |
| GTTGTGCATTCTCTGGTGGT+GGG | - | chr3.4:75326993-75327012 | None:intergenic | 50.0% | |
| TCAGCCGTCGAATAACGTGA+CGG | + | chr3.4:75327353-75327372 | MS.gene074408:CDS | 50.0% | |
| TGCGGTAGGTTTGATCCTTG+GGG | - | chr3.4:75326969-75326988 | None:intergenic | 50.0% | |
| TTCGACGGCTGATAAAACGC+CGG | - | chr3.4:75327345-75327364 | None:intergenic | 50.0% | |
| TTGGAGGATCTGTGAAGACG+TGG | + | chr3.4:75327505-75327524 | MS.gene074408:CDS | 50.0% | |
| ! | AACGTTGAAGCTGAGAGCAC+CGG | + | chr3.4:75327470-75327489 | MS.gene074408:CDS | 50.0% |
| ! | ACTTTTGCGGCGAGTGTAGT+TGG | - | chr3.4:75327022-75327041 | None:intergenic | 50.0% |
| ! | CGGCATTGAACTTGCGAGAT+CGG | + | chr3.4:75327401-75327420 | MS.gene074408:CDS | 50.0% |
| !! | AGCGTTGGTGAATGCGGTTA+CGG | + | chr3.4:75327431-75327450 | MS.gene074408:CDS | 50.0% |
| !! | TCAGAGAGCGTTGGTGAATG+CGG | + | chr3.4:75327425-75327444 | MS.gene074408:CDS | 50.0% |
| AGGTTTGATCCTTGGGGAGC+TGG | - | chr3.4:75326963-75326982 | None:intergenic | 55.0% | |
| CGTTGTGCATTCTCTGGTGG+TGG | - | chr3.4:75326994-75327013 | None:intergenic | 55.0% | |
| ! | GAGATCGGATCAGAGAGCGT+TGG | + | chr3.4:75327416-75327435 | MS.gene074408:CDS | 55.0% |
| !! | CATTCTCTGGTGGTGGGATG+CGG | - | chr3.4:75326987-75327006 | None:intergenic | 55.0% |
| !! | TGGAAGGTGGAGAGGCGTTA+GGG | - | chr3.4:75326903-75326922 | None:intergenic | 55.0% |
| !! | TTGGAAGGTGGAGAGGCGTT+AGG | - | chr3.4:75326904-75326923 | None:intergenic | 55.0% |
| ACACTCGCCGCAAAAGTCGC+CGG | + | chr3.4:75327025-75327044 | MS.gene074408:CDS | 60.0% | |
| ACGGCTGATAAAACGCCGGC+AGG | - | chr3.4:75327341-75327360 | None:intergenic | 60.0% | |
| GACAGCAACAGCATCCGCAC+CGG | - | chr3.4:75327047-75327066 | None:intergenic | 60.0% | |
| GGTGGATCAGTTAACGGCGC+AGG | + | chr3.4:75327560-75327579 | MS.gene074408:CDS | 60.0% | |
| TCTCTGTAACGGCGTCCTGC+CGG | + | chr3.4:75327323-75327342 | MS.gene074408:CDS | 60.0% | |
| ! | AGCGGTGTTGGAAGGTGGAG+AGG | - | chr3.4:75326911-75326930 | None:intergenic | 60.0% |
| ! | GATGGAGCGGTGTTGGAAGG+TGG | - | chr3.4:75326916-75326935 | None:intergenic | 60.0% |
| !! | ATCCGCACCGGCGACTTTTG+CGG | - | chr3.4:75327035-75327054 | None:intergenic | 60.0% |
| GTGCTCATGGCCATCGCTGC+CGG | + | chr3.4:75327102-75327121 | MS.gene074408:CDS | 65.0% | |
| TATGTTCCGGACGGCGGCGA+TGG | - | chr3.4:75326934-75326953 | None:intergenic | 65.0% | |
| ! | GGCGATGGAGCGGTGTTGGA+AGG | - | chr3.4:75326919-75326938 | None:intergenic | 65.0% |
| !! | CTCTGGTGGTGGGATGCGGT+AGG | - | chr3.4:75326983-75327002 | None:intergenic | 65.0% |
| CGCCGCAAAAGTCGCCGGTG+CGG | + | chr3.4:75327030-75327049 | MS.gene074408:CDS | 70.0% | |
| ACCGCTCCATCGCCGCCGTC+CGG | + | chr3.4:75326925-75326944 | MS.gene074408:CDS | 75.0% | |
| CGGCGGCGATGGAGCGGTGT+TGG | - | chr3.4:75326923-75326942 | None:intergenic | 75.0% | |
| TCCGGACGGCGGCGATGGAG+CGG | - | chr3.4:75326929-75326948 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 75326883 | 75327632 | 75326883 | ID=MS.gene074408 |
| chr3.4 | mRNA | 75326883 | 75327632 | 75326883 | ID=MS.gene074408.t1;Parent=MS.gene074408 |
| chr3.4 | exon | 75326883 | 75327632 | 75326883 | ID=MS.gene074408.t1.exon1;Parent=MS.gene074408.t1 |
| chr3.4 | CDS | 75326883 | 75327632 | 75326883 | ID=cds.MS.gene074408.t1;Parent=MS.gene074408.t1 |
| Gene Sequence |
| Protein sequence |
