Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074504.t1 | XP_024639602.1 | 97.5 | 789 | 17 | 1 | 1 | 789 | 1 | 786 | 0.00E+00 | 1500.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074504.t1 | Q9SZL8 | 70.4 | 800 | 213 | 6 | 1 | 789 | 2 | 788 | 0.0e+00 | 1127.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074504.t1 | A0A396HY09 | 97.5 | 789 | 17 | 1 | 1 | 789 | 1 | 786 | 0.0e+00 | 1500.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene074504.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene047262 | MS.gene074504 | PPI |
MS.gene51985 | MS.gene074504 | PPI |
MS.gene62038 | MS.gene074504 | PPI |
MS.gene004518 | MS.gene074504 | PPI |
MS.gene51704 | MS.gene074504 | PPI |
MS.gene56339 | MS.gene074504 | PPI |
MS.gene002832 | MS.gene074504 | PPI |
MS.gene00932 | MS.gene074504 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074504.t1 | MTR_6g051425 | 34.098 | 305 | 194 | 6 | 66 | 367 | 20 | 320 | 2.36e-49 | 177 |
MS.gene074504.t1 | MTR_0402s0040 | 38.068 | 176 | 105 | 2 | 63 | 238 | 26 | 197 | 5.25e-30 | 125 |
MS.gene074504.t1 | MTR_1g070355 | 31.224 | 237 | 157 | 5 | 68 | 304 | 79 | 309 | 5.80e-30 | 125 |
MS.gene074504.t1 | MTR_4g035820 | 28.316 | 392 | 242 | 15 | 35 | 397 | 45 | 426 | 2.27e-28 | 122 |
MS.gene074504.t1 | MTR_4g067290 | 44.156 | 154 | 74 | 5 | 24 | 170 | 10 | 158 | 2.49e-28 | 114 |
MS.gene074504.t1 | MTR_4g067290 | 44.156 | 154 | 74 | 5 | 24 | 170 | 10 | 158 | 2.61e-28 | 114 |
MS.gene074504.t1 | MTR_4g067290 | 42.857 | 154 | 76 | 4 | 24 | 170 | 30 | 178 | 5.06e-28 | 114 |
MS.gene074504.t1 | MTR_4g067290 | 44.156 | 154 | 74 | 5 | 24 | 170 | 30 | 178 | 5.42e-28 | 114 |
MS.gene074504.t1 | MTR_4g067290 | 44.156 | 154 | 74 | 5 | 24 | 170 | 28 | 176 | 5.48e-28 | 114 |
MS.gene074504.t1 | MTR_4g067290 | 44.156 | 154 | 74 | 5 | 24 | 170 | 70 | 218 | 7.20e-28 | 114 |
MS.gene074504.t1 | MTR_3g006370 | 52.778 | 108 | 48 | 2 | 62 | 169 | 49 | 153 | 1.70e-27 | 111 |
MS.gene074504.t1 | MTR_7g446520 | 32.567 | 261 | 148 | 7 | 67 | 326 | 92 | 325 | 2.25e-27 | 114 |
MS.gene074504.t1 | MTR_0558s0020 | 26.415 | 265 | 176 | 5 | 62 | 310 | 35 | 296 | 2.93e-26 | 110 |
MS.gene074504.t1 | MTR_2g098920 | 54.128 | 109 | 45 | 3 | 62 | 170 | 79 | 182 | 1.57e-25 | 107 |
MS.gene074504.t1 | MTR_2g098880 | 44.737 | 114 | 61 | 2 | 61 | 174 | 59 | 170 | 3.97e-25 | 105 |
MS.gene074504.t1 | MTR_2g098880 | 44.737 | 114 | 61 | 2 | 61 | 174 | 71 | 182 | 6.08e-25 | 105 |
MS.gene074504.t1 | MTR_7g446480 | 34.270 | 178 | 113 | 2 | 142 | 318 | 140 | 314 | 2.02e-24 | 105 |
MS.gene074504.t1 | MTR_5g076070 | 26.718 | 262 | 181 | 6 | 38 | 298 | 31 | 282 | 6.44e-24 | 102 |
MS.gene074504.t1 | MTR_7g446510 | 32.701 | 211 | 126 | 4 | 112 | 318 | 131 | 329 | 7.72e-24 | 103 |
MS.gene074504.t1 | MTR_1g008290 | 34.459 | 148 | 89 | 4 | 117 | 263 | 4 | 144 | 9.28e-22 | 92.8 |
MS.gene074504.t1 | MTR_8g446020 | 30.286 | 175 | 118 | 2 | 137 | 310 | 85 | 256 | 3.25e-21 | 94.4 |
MS.gene074504.t1 | MTR_5g015480 | 41.129 | 124 | 70 | 2 | 63 | 186 | 56 | 176 | 1.70e-19 | 89.4 |
MS.gene074504.t1 | MTR_6g090505 | 26.636 | 214 | 142 | 4 | 108 | 309 | 20 | 230 | 1.16e-18 | 89.0 |
MS.gene074504.t1 | MTR_7g074790 | 31.638 | 177 | 98 | 2 | 60 | 236 | 7 | 160 | 2.31e-18 | 85.5 |
MS.gene074504.t1 | MTR_1g083640 | 25.532 | 235 | 156 | 5 | 62 | 280 | 50 | 281 | 1.14e-17 | 84.7 |
MS.gene074504.t1 | MTR_1g019850 | 30.357 | 168 | 104 | 3 | 32 | 199 | 42 | 196 | 2.07e-17 | 82.8 |
MS.gene074504.t1 | MTR_6g022070 | 25.000 | 208 | 142 | 3 | 364 | 562 | 1 | 203 | 1.28e-16 | 82.4 |
MS.gene074504.t1 | MTR_2g070590 | 36.792 | 106 | 64 | 1 | 63 | 168 | 17 | 119 | 2.64e-16 | 76.3 |
MS.gene074504.t1 | MTR_1g013060 | 25.943 | 212 | 152 | 3 | 60 | 268 | 21 | 230 | 1.09e-15 | 77.8 |
MS.gene074504.t1 | MTR_0853s0010 | 29.932 | 147 | 92 | 3 | 57 | 199 | 19 | 158 | 1.27e-15 | 75.9 |
MS.gene074504.t1 | MTR_3g450850 | 25.357 | 280 | 184 | 7 | 37 | 298 | 14 | 286 | 1.86e-15 | 79.0 |
MS.gene074504.t1 | MTR_5g039760 | 27.861 | 201 | 116 | 5 | 60 | 259 | 7 | 179 | 2.19e-15 | 75.9 |
MS.gene074504.t1 | MTR_7g113010 | 35.537 | 121 | 61 | 2 | 63 | 183 | 457 | 560 | 1.19e-14 | 78.2 |
MS.gene074504.t1 | MTR_6g017200 | 36.364 | 99 | 60 | 1 | 63 | 161 | 58 | 153 | 1.50e-14 | 72.4 |
MS.gene074504.t1 | MTR_1g057920 | 38.710 | 93 | 54 | 1 | 63 | 155 | 34 | 123 | 4.71e-14 | 69.7 |
MS.gene074504.t1 | MTR_6g022080 | 27.273 | 154 | 108 | 3 | 69 | 221 | 91 | 241 | 1.26e-13 | 72.0 |
MS.gene074504.t1 | MTR_7g028855 | 30.244 | 205 | 131 | 4 | 9 | 208 | 66 | 263 | 1.85e-13 | 73.9 |
MS.gene074504.t1 | MTR_2g101460 | 39.683 | 126 | 68 | 4 | 61 | 182 | 41 | 162 | 9.05e-13 | 68.6 |
MS.gene074504.t1 | MTR_2g101460 | 40.164 | 122 | 65 | 4 | 61 | 178 | 51 | 168 | 1.20e-12 | 68.2 |
MS.gene074504.t1 | MTR_8g465780 | 33.333 | 96 | 63 | 1 | 448 | 542 | 8 | 103 | 1.93e-11 | 63.9 |
MS.gene074504.t1 | MTR_2g014100 | 24.651 | 215 | 144 | 5 | 50 | 248 | 33 | 245 | 4.64e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074504.t1 | AT4G38180 | 70.705 | 809 | 195 | 8 | 1 | 789 | 2 | 788 | 0.0 | 1158 |
MS.gene074504.t1 | AT2G27110 | 46.022 | 641 | 306 | 9 | 57 | 696 | 43 | 644 | 0.0 | 585 |
MS.gene074504.t1 | AT2G27110 | 46.022 | 641 | 306 | 9 | 57 | 696 | 43 | 644 | 0.0 | 585 |
MS.gene074504.t1 | AT4G38170 | 48.540 | 548 | 261 | 5 | 241 | 787 | 18 | 545 | 0.0 | 546 |
MS.gene074504.t1 | AT2G27110 | 52.564 | 468 | 214 | 3 | 229 | 696 | 40 | 499 | 1.27e-176 | 524 |
MS.gene074504.t1 | AT4G15090 | 36.228 | 668 | 410 | 9 | 50 | 715 | 38 | 691 | 1.27e-150 | 461 |
MS.gene074504.t1 | AT4G15090 | 36.228 | 668 | 410 | 9 | 50 | 715 | 38 | 691 | 1.27e-150 | 461 |
MS.gene074504.t1 | AT4G15090 | 36.228 | 668 | 410 | 9 | 50 | 715 | 38 | 691 | 1.27e-150 | 461 |
MS.gene074504.t1 | AT4G15090 | 36.228 | 668 | 410 | 9 | 50 | 715 | 38 | 691 | 1.27e-150 | 461 |
MS.gene074504.t1 | AT4G15090 | 36.228 | 668 | 410 | 9 | 50 | 715 | 38 | 691 | 1.27e-150 | 461 |
MS.gene074504.t1 | AT3G22170 | 34.942 | 684 | 389 | 10 | 24 | 690 | 30 | 674 | 1.78e-143 | 443 |
MS.gene074504.t1 | AT3G22170 | 34.942 | 684 | 389 | 10 | 24 | 690 | 30 | 674 | 1.78e-143 | 443 |
MS.gene074504.t1 | AT1G76320 | 36.783 | 628 | 362 | 12 | 67 | 688 | 1 | 599 | 4.66e-133 | 410 |
MS.gene074504.t1 | AT5G18960 | 37.143 | 630 | 337 | 12 | 62 | 687 | 210 | 784 | 1.01e-132 | 413 |
MS.gene074504.t1 | AT5G18960 | 39.837 | 123 | 48 | 4 | 46 | 168 | 35 | 131 | 7.18e-17 | 85.9 |
MS.gene074504.t1 | AT5G18960 | 37.143 | 630 | 337 | 12 | 62 | 687 | 210 | 784 | 1.01e-132 | 413 |
MS.gene074504.t1 | AT5G18960 | 39.837 | 123 | 48 | 4 | 46 | 168 | 35 | 131 | 7.18e-17 | 85.9 |
MS.gene074504.t1 | AT1G76320 | 36.783 | 628 | 362 | 12 | 67 | 688 | 1 | 599 | 3.71e-132 | 410 |
MS.gene074504.t1 | AT1G76320 | 36.783 | 628 | 362 | 12 | 67 | 688 | 1 | 599 | 4.17e-132 | 410 |
MS.gene074504.t1 | AT1G76320 | 36.783 | 628 | 362 | 12 | 67 | 688 | 1 | 599 | 4.17e-132 | 410 |
MS.gene074504.t1 | AT3G06250 | 36.090 | 665 | 349 | 15 | 40 | 687 | 155 | 760 | 9.81e-132 | 410 |
MS.gene074504.t1 | AT3G06250 | 41.667 | 108 | 46 | 3 | 61 | 168 | 26 | 116 | 1.03e-16 | 85.1 |
MS.gene074504.t1 | AT3G06250 | 36.090 | 665 | 349 | 15 | 40 | 687 | 155 | 760 | 9.81e-132 | 410 |
MS.gene074504.t1 | AT3G06250 | 41.667 | 108 | 46 | 3 | 61 | 168 | 26 | 116 | 1.03e-16 | 85.1 |
MS.gene074504.t1 | AT3G06250 | 36.090 | 665 | 349 | 15 | 40 | 687 | 155 | 760 | 9.81e-132 | 410 |
MS.gene074504.t1 | AT3G06250 | 41.667 | 108 | 46 | 3 | 61 | 168 | 26 | 116 | 1.03e-16 | 85.1 |
MS.gene074504.t1 | AT4G19990 | 35.303 | 643 | 353 | 15 | 60 | 686 | 18 | 613 | 4.81e-119 | 377 |
MS.gene074504.t1 | AT4G19990 | 35.303 | 643 | 353 | 15 | 60 | 686 | 18 | 613 | 4.81e-119 | 377 |
MS.gene074504.t1 | AT4G19990 | 35.303 | 643 | 353 | 15 | 60 | 686 | 18 | 613 | 8.29e-119 | 376 |
MS.gene074504.t1 | AT4G19990 | 35.303 | 643 | 353 | 15 | 60 | 686 | 32 | 627 | 9.36e-119 | 376 |
MS.gene074504.t1 | AT4G19990 | 35.303 | 643 | 353 | 15 | 60 | 686 | 18 | 613 | 1.68e-118 | 376 |
MS.gene074504.t1 | AT4G19990 | 35.303 | 643 | 353 | 15 | 60 | 686 | 18 | 613 | 1.68e-118 | 376 |
MS.gene074504.t1 | AT2G32250 | 33.283 | 661 | 385 | 9 | 25 | 685 | 1 | 605 | 5.11e-116 | 369 |
MS.gene074504.t1 | AT2G32250 | 33.283 | 661 | 385 | 9 | 25 | 685 | 1 | 605 | 1.48e-115 | 369 |
MS.gene074504.t1 | AT2G32250 | 33.283 | 661 | 385 | 9 | 25 | 685 | 1 | 605 | 1.48e-115 | 369 |
MS.gene074504.t1 | AT2G32250 | 33.737 | 661 | 382 | 9 | 25 | 685 | 1 | 605 | 1.67e-115 | 369 |
MS.gene074504.t1 | AT2G32250 | 33.737 | 661 | 382 | 9 | 25 | 685 | 1 | 605 | 1.67e-115 | 369 |
MS.gene074504.t1 | AT2G32250 | 33.737 | 661 | 382 | 9 | 25 | 685 | 1 | 605 | 1.67e-115 | 369 |
MS.gene074504.t1 | AT2G32250 | 33.764 | 619 | 355 | 8 | 67 | 685 | 1 | 564 | 6.77e-114 | 363 |
MS.gene074504.t1 | AT2G32250 | 33.764 | 619 | 355 | 8 | 67 | 685 | 1 | 564 | 8.96e-114 | 363 |
MS.gene074504.t1 | AT4G19990 | 33.943 | 601 | 334 | 15 | 102 | 686 | 3 | 556 | 1.18e-103 | 334 |
MS.gene074504.t1 | AT1G52520 | 31.167 | 677 | 419 | 20 | 35 | 694 | 56 | 702 | 7.53e-97 | 317 |
MS.gene074504.t1 | AT1G80010 | 30.640 | 656 | 403 | 17 | 63 | 693 | 95 | 723 | 6.98e-92 | 304 |
MS.gene074504.t1 | AT1G10240 | 27.937 | 698 | 463 | 17 | 18 | 705 | 3 | 670 | 9.06e-84 | 281 |
MS.gene074504.t1 | AT1G10240 | 27.937 | 698 | 463 | 17 | 18 | 705 | 3 | 670 | 9.06e-84 | 281 |
MS.gene074504.t1 | AT5G28530 | 31.399 | 586 | 361 | 15 | 63 | 627 | 55 | 620 | 2.91e-75 | 258 |
MS.gene074504.t1 | AT5G28530 | 31.399 | 586 | 357 | 16 | 63 | 627 | 55 | 616 | 6.06e-75 | 257 |
MS.gene074504.t1 | AT5G28530 | 31.399 | 586 | 357 | 16 | 63 | 627 | 55 | 616 | 6.06e-75 | 257 |
MS.gene074504.t1 | AT5G28530 | 28.522 | 575 | 329 | 16 | 63 | 627 | 55 | 557 | 3.87e-53 | 195 |
MS.gene074504.t1 | AT5G28530 | 28.522 | 575 | 325 | 17 | 63 | 627 | 55 | 553 | 8.15e-53 | 194 |
MS.gene074504.t1 | AT3G59470 | 43.429 | 175 | 78 | 5 | 12 | 170 | 3 | 172 | 6.32e-30 | 119 |
MS.gene074504.t1 | AT3G59470 | 43.429 | 175 | 78 | 5 | 12 | 170 | 3 | 172 | 6.32e-30 | 119 |
MS.gene074504.t1 | AT3G59470 | 43.429 | 175 | 78 | 5 | 12 | 170 | 15 | 184 | 7.96e-30 | 119 |
MS.gene074504.t1 | AT2G43280 | 45.455 | 143 | 68 | 4 | 37 | 177 | 1 | 135 | 1.02e-28 | 114 |
MS.gene074504.t1 | AT3G07500 | 47.368 | 133 | 65 | 3 | 39 | 170 | 8 | 136 | 1.57e-27 | 111 |
MS.gene074504.t1 | AT2G43280 | 48.039 | 102 | 48 | 3 | 78 | 177 | 2 | 100 | 4.35e-21 | 91.7 |
MS.gene074504.t1 | AT4G12850 | 42.982 | 114 | 55 | 3 | 58 | 168 | 3 | 109 | 1.01e-20 | 89.4 |
MS.gene074504.t1 | AT4G12850 | 42.982 | 114 | 55 | 3 | 58 | 168 | 3 | 109 | 2.49e-20 | 88.6 |
MS.gene074504.t1 | AT4G12850 | 42.982 | 114 | 55 | 3 | 58 | 168 | 3 | 109 | 2.62e-20 | 89.7 |
Find 186 sgRNAs with CRISPR-Local
Find 429 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGTTCCCACCGGCAAATTTC+TGG | 0.095237 | 5.4:-78541578 | MS.gene074504:CDS |
CAAAGAAGAAATTAGGATTT+TGG | 0.123283 | 5.4:+78541351 | None:intergenic |
ACCTTTATCAACAAATTTAA+AGG | 0.150987 | 5.4:+78540134 | None:intergenic |
TCATGTATATACTTACTATT+TGG | 0.183092 | 5.4:-78540196 | MS.gene074504:CDS |
TTACCCTTTGCTCCCTTTAC+TGG | 0.199899 | 5.4:-78541191 | MS.gene074504:CDS |
ACATATCATGTAGCTAAATT+TGG | 0.219908 | 5.4:-78540429 | MS.gene074504:CDS |
CATGGTCAACCTGTTCTCTT+TGG | 0.223496 | 5.4:-78541158 | MS.gene074504:CDS |
TGAACAGCAAAGAAGAAATT+AGG | 0.236435 | 5.4:+78541344 | None:intergenic |
CCTTCTTTGCAGACATATTC+TGG | 0.237940 | 5.4:-78540322 | MS.gene074504:CDS |
AGAAGAAGAAGATGATGATT+TGG | 0.241377 | 5.4:-78541999 | MS.gene074504:CDS |
TTTGCAACATCATAAGTTTC+AGG | 0.247657 | 5.4:+78540102 | None:intergenic |
GCCTTTAAATTTGTTGATAA+AGG | 0.252707 | 5.4:-78540135 | MS.gene074504:CDS |
AACCCTAATTGACACTTTAC+AGG | 0.254986 | 5.4:-78541546 | MS.gene074504:CDS |
TGAAACTCGGCTTCAAAGTT+TGG | 0.256048 | 5.4:+78540912 | None:intergenic |
CAGCCTGTAAAGTGTCAATT+AGG | 0.264947 | 5.4:+78541543 | None:intergenic |
TTGCAAACTGACGTTGCTTT+TGG | 0.278488 | 5.4:+78540230 | None:intergenic |
TAATATCTTGCAGGATGATA+TGG | 0.290977 | 5.4:-78536613 | MS.gene074504:intron |
AATTTCTTCTTTGCTGTTCA+AGG | 0.292471 | 5.4:-78541341 | MS.gene074504:CDS |
CACTTTACAGGCTGCTGGTA+TGG | 0.294110 | 5.4:-78541534 | MS.gene074504:CDS |
TCTGCCAAGTGGATCGTATC+TGG | 0.294800 | 5.4:-78541656 | MS.gene074504:CDS |
GTAGAATTTGATATTGGTTT+GGG | 0.307344 | 5.4:-78542094 | MS.gene074504:CDS |
GGTAGAATTTGATATTGGTT+TGG | 0.326592 | 5.4:-78542095 | MS.gene074504:CDS |
CTTAAAGAACTGATTTAAAC+TGG | 0.329541 | 5.4:+78540665 | None:intergenic |
GCGTTTGATCTCTCTGTCTT+TGG | 0.332960 | 5.4:+78541739 | None:intergenic |
AAGCAATACATTCCGCTTGC+AGG | 0.336808 | 5.4:-78540794 | MS.gene074504:CDS |
TTGACGAATTTGAGTCTTGC+TGG | 0.341126 | 5.4:-78540863 | MS.gene074504:CDS |
GTGTAATTCAACCTTGCCTT+GGG | 0.343488 | 5.4:+78541269 | None:intergenic |
CAGAAACGGTGACGAGTGTC+TGG | 0.344341 | 5.4:+78540993 | None:intergenic |
CTCCCCATCATCCTCAGCTT+TGG | 0.350878 | 5.4:+78540458 | None:intergenic |
GAAGAAGAAGATGATGATTT+GGG | 0.351944 | 5.4:-78541998 | MS.gene074504:CDS |
TACATTCCGCTTGCAGGCAC+TGG | 0.358152 | 5.4:-78540788 | MS.gene074504:CDS |
AGCATGAACTCTTACTTTGA+TGG | 0.369267 | 5.4:-78540705 | MS.gene074504:CDS |
TTGCAGATCCAGAAATTTGC+CGG | 0.376547 | 5.4:+78541570 | None:intergenic |
GGAGATGGGGTCCTCAATAC+TGG | 0.377437 | 5.4:+78540570 | None:intergenic |
AAACTGAAGCTTCCTTTGTC+TGG | 0.378773 | 5.4:-78541115 | MS.gene074504:CDS |
GCTTTACTGAGGTTGATTGT+AGG | 0.379314 | 5.4:-78541454 | MS.gene074504:CDS |
ACATGGCTTACCGCCATGTC+TGG | 0.388564 | 5.4:-78541083 | MS.gene074504:CDS |
ACACTACTTACCGCTCTAAC+AGG | 0.393642 | 5.4:-78541220 | MS.gene074504:CDS |
GAAACTCGGCTTCAAAGTTT+GGG | 0.402169 | 5.4:+78540913 | None:intergenic |
CGGCTTCAAAGTTTGGGAAC+TGG | 0.404355 | 5.4:+78540919 | None:intergenic |
AGAATCATGATCAGTGGTTA+TGG | 0.407548 | 5.4:+78541046 | None:intergenic |
TCTGCACTCATCAAAGAGTA+TGG | 0.412149 | 5.4:-78541494 | MS.gene074504:CDS |
GGTTGGCACGCTAACATTCA+TGG | 0.415317 | 5.4:-78540484 | MS.gene074504:CDS |
AGGTTCCAGATCTCCGGCCT+CGG | 0.416546 | 5.4:+78541943 | None:intergenic |
GCTTGCCTCTCCATCGGAGA+TGG | 0.422404 | 5.4:+78540555 | None:intergenic |
CTTGCCTCTCCATCGGAGAT+GGG | 0.427432 | 5.4:+78540556 | None:intergenic |
TGGTTTGGGAGGAGAATATG+AGG | 0.434179 | 5.4:-78542080 | MS.gene074504:CDS |
ATGAGCTTGAGTGTGCAAAT+AGG | 0.437500 | 5.4:-78536566 | MS.gene074504:CDS |
GGCCTGAAAACTCAAACATT+TGG | 0.440126 | 5.4:+78540343 | None:intergenic |
GAGGTGGTAGAATTTGATAT+TGG | 0.442215 | 5.4:-78542100 | MS.gene074504:CDS |
CCATCAGCAATGGGAAGGTT+AGG | 0.443830 | 5.4:-78540017 | MS.gene074504:CDS |
CGAAGGCAGTGAACCTGATC+GGG | 0.445748 | 5.4:+78541599 | None:intergenic |
CCAGAATATGTCTGCAAAGA+AGG | 0.449302 | 5.4:+78540322 | None:intergenic |
CCAACCCTTGTGACTGTTCG+TGG | 0.450668 | 5.4:+78541716 | None:intergenic |
CGAACTTGTTCCACCCGATC+AGG | 0.450679 | 5.4:-78541612 | MS.gene074504:CDS |
TCTGGAACCTTCCGAGGGTA+TGG | 0.455551 | 5.4:-78541930 | MS.gene074504:CDS |
TGAGATGATGGACGAGGATG+AGG | 0.456458 | 5.4:-78542041 | MS.gene074504:CDS |
CACTCGATTCCAAGAGGAGT+TGG | 0.457309 | 5.4:-78540505 | MS.gene074504:CDS |
TTGGGAGAAAGCAGCGGCAG+CGG | 0.460216 | 5.4:-78541980 | MS.gene074504:CDS |
TAATTACACTAGTGGCTGTC+AGG | 0.463053 | 5.4:-78539965 | MS.gene074504:CDS |
AGCCTGTAAAGTGTCAATTA+GGG | 0.465989 | 5.4:+78541544 | None:intergenic |
GCGTGCCAACCAACTCCTCT+TGG | 0.469006 | 5.4:+78540496 | None:intergenic |
TTGCAACATCATAAGTTTCA+GGG | 0.472255 | 5.4:+78540103 | None:intergenic |
GGCTGTCAGGATGAAAGCTT+GGG | 0.472435 | 5.4:-78539952 | MS.gene074504:CDS |
AATGTGTCTCGCAAATATAC+AGG | 0.473103 | 5.4:+78540762 | None:intergenic |
GCATCCAAAGCTGAGGATGA+TGG | 0.473156 | 5.4:-78540462 | MS.gene074504:CDS |
TGGCTGTCAGGATGAAAGCT+TGG | 0.476969 | 5.4:-78539953 | MS.gene074504:CDS |
ACTTTACAGGCTGCTGGTAT+GGG | 0.477051 | 5.4:-78541533 | MS.gene074504:CDS |
AAAGCACAACCAAAGAGAAC+AGG | 0.481412 | 5.4:+78541149 | None:intergenic |
AGATATGCCACTTGCAGAAA+CGG | 0.486193 | 5.4:+78540979 | None:intergenic |
CATCCAAAGCTGAGGATGAT+GGG | 0.487357 | 5.4:-78540461 | MS.gene074504:CDS |
CCTAACCTTCCCATTGCTGA+TGG | 0.492796 | 5.4:+78540017 | None:intergenic |
TATAATGAGATGGAAGAGTA+AGG | 0.493011 | 5.4:+78540277 | None:intergenic |
TGATGGTTTACACCAGTAAA+GGG | 0.493735 | 5.4:+78541179 | None:intergenic |
TGAATACTTTGCCAGTATTG+AGG | 0.495207 | 5.4:-78540581 | MS.gene074504:CDS |
TTCACTGCCTTCGTTCCCAC+CGG | 0.499535 | 5.4:-78541589 | MS.gene074504:CDS |
CGAGTCTGAAGAGGCTGCTA+AGG | 0.500073 | 5.4:-78541903 | MS.gene074504:CDS |
ATGATCTCAGGGACAATGAA+TGG | 0.501996 | 5.4:-78540821 | MS.gene074504:CDS |
CTCGTCACCGTTTCTGCAAG+TGG | 0.503151 | 5.4:-78540986 | MS.gene074504:CDS |
GGTTCCAGATCTCCGGCCTC+GGG | 0.504308 | 5.4:+78541944 | None:intergenic |
AATTCCTATGCTCGTCGTGT+TGG | 0.505166 | 5.4:-78541872 | MS.gene074504:CDS |
GAATTTGATATTGGTTTGGG+AGG | 0.506640 | 5.4:-78542091 | MS.gene074504:CDS |
TAAGCATATCACGAAACTTA+CGG | 0.506729 | 5.4:-78536589 | MS.gene074504:CDS |
ATGATGGTTTACACCAGTAA+AGG | 0.513575 | 5.4:+78541178 | None:intergenic |
AGTGTAATTCAACCTTGCCT+TGG | 0.518295 | 5.4:+78541268 | None:intergenic |
CTCATTATATACTCAAACGC+TGG | 0.519018 | 5.4:-78540263 | MS.gene074504:CDS |
GAGACAATTCGTTTGTGCTA+AGG | 0.519061 | 5.4:-78541792 | MS.gene074504:CDS |
AGCCCAGAAAACATTGGTGA+TGG | 0.521427 | 5.4:+78541295 | None:intergenic |
AAATGTGAGACAACTTCTCC+TGG | 0.528603 | 5.4:+78540946 | None:intergenic |
GGAGAACTCCCATCAGCAAT+GGG | 0.531715 | 5.4:-78540026 | MS.gene074504:CDS |
ATTGACACTTTACAGGCTGC+TGG | 0.532057 | 5.4:-78541539 | MS.gene074504:CDS |
GTTAGAGTTGTCAGTAAAGG+TGG | 0.534829 | 5.4:-78536484 | MS.gene074504:CDS |
AGAGAACAGGTTGACCATGA+TGG | 0.535460 | 5.4:+78541162 | None:intergenic |
CTCGGAAGGTTCCAGATCTC+CGG | 0.536526 | 5.4:+78541937 | None:intergenic |
CAATTCGTTTGTGCTAAGGA+AGG | 0.537258 | 5.4:-78541788 | MS.gene074504:CDS |
GAAACCAACACGACGAGCAT+AGG | 0.538449 | 5.4:+78541868 | None:intergenic |
ACGAAGGCAGTGAACCTGAT+CGG | 0.539597 | 5.4:+78541598 | None:intergenic |
TATGGTGGTATCAGCAAGGT+TGG | 0.539841 | 5.4:-78541476 | MS.gene074504:CDS |
CAAGTTAGAGTTGTCAGTAA+AGG | 0.539938 | 5.4:-78536487 | MS.gene074504:CDS |
TCTGGGCTGACCCCAAGGCA+AGG | 0.540324 | 5.4:-78541280 | MS.gene074504:CDS |
CGGAGATCTGGAACCTTCCG+AGG | 0.543379 | 5.4:-78541936 | MS.gene074504:CDS |
TCTCGTCGTTCTCGCCGCGA+CGG | 0.544434 | 5.4:-78541827 | MS.gene074504:CDS |
GGGAGAACTCCCATCAGCAA+TGG | 0.547438 | 5.4:-78540027 | MS.gene074504:CDS |
AATCGCCATAAAAGTTTACA+AGG | 0.550036 | 5.4:-78541416 | MS.gene074504:CDS |
GCCGCCGCATATTGAGATGA+TGG | 0.551096 | 5.4:-78542053 | MS.gene074504:CDS |
ACACCAGTAAAGGGAGCAAA+GGG | 0.551736 | 5.4:+78541188 | None:intergenic |
TGATCAGTGGTTATGGAGAG+TGG | 0.552554 | 5.4:+78541053 | None:intergenic |
GTTAACACATTTGTGAAACT+CGG | 0.558202 | 5.4:+78540899 | None:intergenic |
TCGGATGCTTGCCTCTCCAT+CGG | 0.558570 | 5.4:+78540549 | None:intergenic |
AATTCGTTTGTGCTAAGGAA+GGG | 0.559501 | 5.4:-78541787 | MS.gene074504:CDS |
GCGCAGGTAATGCGAAAGGA+GGG | 0.559887 | 5.4:-78540048 | MS.gene074504:CDS |
GATCAGTGGTTATGGAGAGT+GGG | 0.560314 | 5.4:+78541054 | None:intergenic |
GATGATGGACGAGGATGAGG+AGG | 0.560621 | 5.4:-78542038 | MS.gene074504:CDS |
GCTATCACTTCGCTGAGTGA+TGG | 0.562682 | 5.4:+78540725 | None:intergenic |
CGATTCCAAGAGGAGTTGGT+TGG | 0.567024 | 5.4:-78540501 | MS.gene074504:CDS |
GCATATCTTTAAGCAATGCC+AGG | 0.569808 | 5.4:-78540964 | MS.gene074504:CDS |
TACACCAGTAAAGGGAGCAA+AGG | 0.570161 | 5.4:+78541187 | None:intergenic |
CTAACCTTCCCATTGCTGAT+GGG | 0.576542 | 5.4:+78540018 | None:intergenic |
ATAGGAAGTGTGAAATGTAC+CGG | 0.577419 | 5.4:-78536548 | MS.gene074504:CDS |
AAATTTGCCGGTGGGAACGA+AGG | 0.578586 | 5.4:+78541582 | None:intergenic |
GCCCAGAAAACATTGGTGAT+GGG | 0.579481 | 5.4:+78541296 | None:intergenic |
TGCACGATTCTTCTGCCAAG+TGG | 0.580316 | 5.4:-78541667 | MS.gene074504:CDS |
ACATTCCGCTTGCAGGCACT+GGG | 0.581089 | 5.4:-78540787 | MS.gene074504:CDS |
ATTGAGGACCCCATCTCCGA+TGG | 0.581233 | 5.4:-78540565 | MS.gene074504:CDS |
CCACGAACAGTCACAAGGGT+TGG | 0.582221 | 5.4:-78541716 | MS.gene074504:CDS |
ATCATATCTGTCTAAAAGTG+TGG | 0.585384 | 5.4:+78540839 | None:intergenic |
TTTACTGGTGTAAACCATCA+TGG | 0.586662 | 5.4:-78541176 | MS.gene074504:CDS |
TGCAACATCATAAGTTTCAG+GGG | 0.590648 | 5.4:+78540104 | None:intergenic |
ATCAGTGGTTATGGAGAGTG+GGG | 0.594819 | 5.4:+78541055 | None:intergenic |
CTTCAAAGTTTGGGAACTGG+AGG | 0.598863 | 5.4:+78540922 | None:intergenic |
AGATGGAAGAGTAAGGACAT+TGG | 0.600676 | 5.4:+78540284 | None:intergenic |
CGTTTGAGTATATAATGAGA+TGG | 0.602082 | 5.4:+78540267 | None:intergenic |
CGCAGGTAATGCGAAAGGAG+GGG | 0.602168 | 5.4:-78540047 | MS.gene074504:CDS |
AACTCCCATCAGCAATGGGA+AGG | 0.604290 | 5.4:-78540022 | MS.gene074504:CDS |
AAACAGAGAGCAAGTTAGAC+CGG | 0.606350 | 5.4:+78536529 | None:intergenic |
CAACCCTTGTGACTGTTCGT+GGG | 0.608141 | 5.4:+78541717 | None:intergenic |
TGCGCAGGTAATGCGAAAGG+AGG | 0.609788 | 5.4:-78540049 | MS.gene074504:CDS |
TTGCCTCTCCATCGGAGATG+GGG | 0.612305 | 5.4:+78540557 | None:intergenic |
CAGATCCAGAAATTTGCCGG+TGG | 0.612578 | 5.4:+78541573 | None:intergenic |
TGTGGTTTGGATGGAGAACG+AGG | 0.614308 | 5.4:-78542119 | None:intergenic |
AGACTCGAATTCCATACCCT+CGG | 0.617359 | 5.4:+78541919 | None:intergenic |
TTTAGACAGATATGATCTCA+GGG | 0.617719 | 5.4:-78540832 | MS.gene074504:CDS |
AACGCCCACGAACAGTCACA+AGG | 0.617810 | 5.4:-78541721 | MS.gene074504:CDS |
AATCATGCTAATTACACTAG+TGG | 0.620695 | 5.4:-78539973 | MS.gene074504:CDS |
ATCCAAAGCTGAGGATGATG+GGG | 0.622295 | 5.4:-78540460 | MS.gene074504:CDS |
AGATCCAGAAATTTGCCGGT+GGG | 0.622920 | 5.4:+78541574 | None:intergenic |
TATGGAATTCGAGTCTGAAG+AGG | 0.624053 | 5.4:-78541912 | MS.gene074504:CDS |
CTTGGGAGAGCATATGAATG+AGG | 0.624492 | 5.4:-78539935 | MS.gene074504:intron |
CAAATTTAAAGGCTTCATGT+CGG | 0.625446 | 5.4:+78540145 | None:intergenic |
CAGCAAGGTTGGCTTTACTG+AGG | 0.625913 | 5.4:-78541465 | MS.gene074504:CDS |
CAGTGGTTATGGAGAGTGGG+GGG | 0.627461 | 5.4:+78541057 | None:intergenic |
TGTGTTGAAAAGCCAGACAA+AGG | 0.628839 | 5.4:+78541103 | None:intergenic |
GGACCCCATCTCCGATGGAG+AGG | 0.629360 | 5.4:-78540560 | MS.gene074504:CDS |
ATTAAGATAAGCATGAAAGA+CGG | 0.631649 | 5.4:-78536456 | MS.gene074504:CDS |
AGGCAGTGAACCTGATCGGG+TGG | 0.632274 | 5.4:+78541602 | None:intergenic |
AGGTACCCAGTGCCTGCAAG+CGG | 0.638903 | 5.4:+78540782 | None:intergenic |
TTTGGGAGGAGAATATGAGG+AGG | 0.639911 | 5.4:-78542077 | MS.gene074504:CDS |
TCGAATTCCATACCCTCGGA+AGG | 0.640288 | 5.4:+78541923 | None:intergenic |
CAAAGCTGAGGATGATGGGG+AGG | 0.640907 | 5.4:-78540457 | MS.gene074504:CDS |
GGGGTCAGCCCAGAAAACAT+TGG | 0.643984 | 5.4:+78541289 | None:intergenic |
AGAAACGGTGACGAGTGTCT+GGG | 0.645500 | 5.4:+78540994 | None:intergenic |
TGGGAATACTTGCATTATAG+CGG | 0.646366 | 5.4:+78541013 | None:intergenic |
GCATATTGAGATGATGGACG+AGG | 0.650585 | 5.4:-78542047 | MS.gene074504:CDS |
TGAAACTTATGATGTTGCAA+AGG | 0.650987 | 5.4:-78540100 | MS.gene074504:CDS |
AGCATGAAAGACGGCCTCTG+AGG | 0.655501 | 5.4:-78536447 | None:intergenic |
TTGATTGTAGGAATTACATG+AGG | 0.657971 | 5.4:-78541442 | MS.gene074504:CDS |
AGTTGCGCAGGTAATGCGAA+AGG | 0.657991 | 5.4:-78540052 | MS.gene074504:CDS |
TCATGTAGCTAAATTTGGAG+AGG | 0.661413 | 5.4:-78540424 | MS.gene074504:CDS |
AATGACAGAATCATGATCAG+TGG | 0.665664 | 5.4:+78541040 | None:intergenic |
GGAGATCTGGAACCTTCCGA+GGG | 0.667168 | 5.4:-78541935 | MS.gene074504:CDS |
ATTCATGGCATCCAAAGCTG+AGG | 0.668434 | 5.4:-78540469 | MS.gene074504:CDS |
GAAGCCAGATACGATCCACT+TGG | 0.669193 | 5.4:+78541652 | None:intergenic |
TCGTCCATCATCTCAATATG+CGG | 0.670750 | 5.4:+78542049 | None:intergenic |
TCAAGGTGATCTTGATGACG+AGG | 0.673752 | 5.4:-78541324 | MS.gene074504:CDS |
AGAGTATGGTGGTATCAGCA+AGG | 0.675333 | 5.4:-78541480 | MS.gene074504:CDS |
TCCATCATCTCAATATGCGG+CGG | 0.677985 | 5.4:+78542052 | None:intergenic |
GTAATCGATACCTGTTAGAG+CGG | 0.683465 | 5.4:+78541210 | None:intergenic |
GCACTCATCAAAGAGTATGG+TGG | 0.683994 | 5.4:-78541491 | MS.gene074504:CDS |
CAATGAGAAAGAAGTAAGAG+CGG | 0.684122 | 5.4:-78540616 | MS.gene074504:CDS |
GATGATTTGGGAGAAAGCAG+CGG | 0.686560 | 5.4:-78541986 | MS.gene074504:CDS |
TGTAATTCAACCTTGCCTTG+GGG | 0.693919 | 5.4:+78541270 | None:intergenic |
TCAGTGGTTATGGAGAGTGG+GGG | 0.699327 | 5.4:+78541056 | None:intergenic |
ACGCCCACGAACAGTCACAA+GGG | 0.715179 | 5.4:-78541720 | MS.gene074504:CDS |
GGTTTGGATGGAGAACGAGG+TGG | 0.749123 | 5.4:-78542116 | None:intergenic |
TCTGAATGATAGCTCCGTCG+CGG | 0.754566 | 5.4:+78541813 | None:intergenic |
AGTGCAGACATAATTCTGCG+AGG | 0.756220 | 5.4:+78541509 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATCATTAGAAAAAAAAT+AGG | + | chr5.4:78541482-78541501 | None:intergenic | 10.0% |
!! | AAATCATTAGAAAAAAAATA+GGG | + | chr5.4:78541481-78541500 | None:intergenic | 10.0% |
!! | AATAATTTATTTACATCAAT+TGG | - | chr5.4:78540120-78540139 | MS.gene074504:CDS | 10.0% |
!! | AATGTTGAATAATAATGATA+TGG | - | chr5.4:78541708-78541727 | MS.gene074504:CDS | 15.0% |
!! | ATTTAGTGTTATATTGTATT+GGG | + | chr5.4:78539667-78539686 | None:intergenic | 15.0% |
!! | TATTTAGTGTTATATTGTAT+TGG | + | chr5.4:78539668-78539687 | None:intergenic | 15.0% |
!!! | AAGAAAAGTGTATAAATAAA+GGG | + | chr5.4:78539732-78539751 | None:intergenic | 15.0% |
!!! | ACATTTTGTGTTTTAATATT+GGG | - | chr5.4:78541016-78541035 | MS.gene074504:CDS | 15.0% |
!!! | ATATGGTTTTGAATTAATTA+AGG | - | chr5.4:78540867-78540886 | MS.gene074504:CDS | 15.0% |
!!! | ATTTTATTTGTACATATTCA+GGG | - | chr5.4:78539998-78540017 | MS.gene074504:CDS | 15.0% |
!!! | TAAGAAAAGTGTATAAATAA+AGG | + | chr5.4:78539733-78539752 | None:intergenic | 15.0% |
!!! | TTTTGTCTAATAGATTATAT+CGG | - | chr5.4:78541853-78541872 | MS.gene074504:CDS | 15.0% |
!! | AAAGTGGAATATATTGTATT+GGG | + | chr5.4:78539708-78539727 | None:intergenic | 20.0% |
!! | ACCTTTATCAACAAATTTAA+AGG | + | chr5.4:78538427-78538446 | None:intergenic | 20.0% |
!! | AGTTGTATTGAAAATTGAAA+TGG | + | chr5.4:78539635-78539654 | None:intergenic | 20.0% |
!! | ATTGTATCACAATCAATATT+TGG | + | chr5.4:78540086-78540105 | None:intergenic | 20.0% |
!! | CACTTATTTATGCAATTTAT+AGG | - | chr5.4:78539946-78539965 | MS.gene074504:CDS | 20.0% |
!! | GTTGTATTGAAAATTGAAAT+GGG | + | chr5.4:78539634-78539653 | None:intergenic | 20.0% |
!! | TAAGAAAATAAATCAGATTG+AGG | + | chr5.4:78541389-78541408 | None:intergenic | 20.0% |
!! | TAAGGAATTTATCTTTCAAA+AGG | + | chr5.4:78540323-78540342 | None:intergenic | 20.0% |
!! | TCATGTATATACTTACTATT+TGG | - | chr5.4:78538362-78538381 | MS.gene074504:intron | 20.0% |
!! | TTAATTTAATACCCATTGAT+TGG | - | chr5.4:78541568-78541587 | MS.gene074504:CDS | 20.0% |
!!! | AAAGAAGAAATTAGGATTTT+GGG | + | chr5.4:78537209-78537228 | None:intergenic | 20.0% |
!!! | AATCTGATTTATTTTCTTAC+TGG | - | chr5.4:78541390-78541409 | MS.gene074504:CDS | 20.0% |
!!! | AATGTTGTTAATGATGTTTT+TGG | + | chr5.4:78541216-78541235 | None:intergenic | 20.0% |
!!! | AGAAAAGTGTATAAATAAAG+GGG | + | chr5.4:78539731-78539750 | None:intergenic | 20.0% |
!!! | ATCTGATTTATTTTCTTACT+GGG | - | chr5.4:78541391-78541410 | MS.gene074504:CDS | 20.0% |
!!! | CACATTTTGTGTTTTAATAT+TGG | - | chr5.4:78541015-78541034 | MS.gene074504:CDS | 20.0% |
!!! | CATTTTATTTGTACATATTC+AGG | - | chr5.4:78539997-78540016 | MS.gene074504:CDS | 20.0% |
!!! | GACACTTTTTTTTAGAAAAT+GGG | + | chr5.4:78539598-78539617 | None:intergenic | 20.0% |
!!! | TTAGTTTTCTTTTTTCTCTT+AGG | - | chr5.4:78540765-78540784 | MS.gene074504:CDS | 20.0% |
!!! | TTTTATTTGTACATATTCAG+GGG | - | chr5.4:78539999-78540018 | MS.gene074504:CDS | 20.0% |
! | AACCATTAGAAAAGATTTAG+AGG | - | chr5.4:78539026-78539045 | MS.gene074504:intron | 25.0% |
! | AATAATGATATGGAAAGAGA+GGG | - | chr5.4:78541718-78541737 | MS.gene074504:CDS | 25.0% |
! | ACATATCATGTAGCTAAATT+TGG | - | chr5.4:78538129-78538148 | MS.gene074504:intron | 25.0% |
! | ATTAAGATAAGCATGAAAGA+CGG | - | chr5.4:78542102-78542121 | MS.gene074504:CDS | 25.0% |
! | CTTAATATCTAATATCTTGC+AGG | - | chr5.4:78541936-78541955 | MS.gene074504:CDS | 25.0% |
! | GAAAGTGGAATATATTGTAT+TGG | + | chr5.4:78539709-78539728 | None:intergenic | 25.0% |
! | GTTCTATCAAAAACCATATT+TGG | + | chr5.4:78539066-78539085 | None:intergenic | 25.0% |
! | TAATAATGATATGGAAAGAG+AGG | - | chr5.4:78541717-78541736 | MS.gene074504:CDS | 25.0% |
! | TACTCTATGATACCTTTATA+GGG | - | chr5.4:78541505-78541524 | MS.gene074504:CDS | 25.0% |
! | TTACTCTATGATACCTTTAT+AGG | - | chr5.4:78541504-78541523 | MS.gene074504:CDS | 25.0% |
!! | AATTTTTCTTGTGTAAAGCT+CGG | + | chr5.4:78538031-78538050 | None:intergenic | 25.0% |
!! | ATATTTTTCTTTATGCCCTA+AGG | + | chr5.4:78540936-78540955 | None:intergenic | 25.0% |
!! | CAAAGAAGAAATTAGGATTT+TGG | + | chr5.4:78537210-78537229 | None:intergenic | 25.0% |
!! | CTTAAAGAACTGATTTAAAC+TGG | + | chr5.4:78537896-78537915 | None:intergenic | 25.0% |
!! | TATTTTTCTTTATGCCCTAA+GGG | + | chr5.4:78540935-78540954 | None:intergenic | 25.0% |
!! | TCTTTTCTAATGGTTTTCTT+AGG | + | chr5.4:78539021-78539040 | None:intergenic | 25.0% |
!! | TTTCATTGATTGAACAAAGT+TGG | - | chr5.4:78540297-78540316 | MS.gene074504:CDS | 25.0% |
!! | TTTTCTACCAACTTTACTAT+AGG | + | chr5.4:78538895-78538914 | None:intergenic | 25.0% |
!!! | AGGTTGAATTACACTTTTTT+CGG | - | chr5.4:78537298-78537317 | MS.gene074504:intron | 25.0% |
!!! | ATATTTGTGAAAGCACTTTT+TGG | + | chr5.4:78541659-78541678 | None:intergenic | 25.0% |
!!! | GCCTTTAAATTTGTTGATAA+AGG | - | chr5.4:78538423-78538442 | MS.gene074504:intron | 25.0% |
!!! | GGACACTTTTTTTTAGAAAA+TGG | + | chr5.4:78539599-78539618 | None:intergenic | 25.0% |
!!! | GTAGAATTTGATATTGGTTT+GGG | - | chr5.4:78536464-78536483 | MS.gene074504:CDS | 25.0% |
!!! | TAGTAAAGTTGGTAGAAAAT+AGG | - | chr5.4:78538896-78538915 | MS.gene074504:intron | 25.0% |
!!! | TCATCTTTTAAGAACCAAAT+TGG | - | chr5.4:78540234-78540253 | MS.gene074504:CDS | 25.0% |
AATCATGCTAATTACACTAG+TGG | - | chr5.4:78538585-78538604 | MS.gene074504:intron | 30.0% | |
AATCGCCATAAAAGTTTACA+AGG | - | chr5.4:78537142-78537161 | MS.gene074504:intron | 30.0% | |
ACAAGACTCATAACTCAAAA+TGG | + | chr5.4:78539866-78539885 | None:intergenic | 30.0% | |
ACATCAAAATGTGAAGTTCT+TGG | + | chr5.4:78540696-78540715 | None:intergenic | 30.0% | |
AGAAGAAGAAGATGATGATT+TGG | - | chr5.4:78536559-78536578 | MS.gene074504:CDS | 30.0% | |
ATAGCACTCAACAAAAATGA+AGG | + | chr5.4:78539510-78539529 | None:intergenic | 30.0% | |
ATCATATCTGTCTAAAAGTG+TGG | + | chr5.4:78537722-78537741 | None:intergenic | 30.0% | |
CAAATTTAAAGGCTTCATGT+CGG | + | chr5.4:78538416-78538435 | None:intergenic | 30.0% | |
CAACAAAAATGAAGGTCAAA+GGG | + | chr5.4:78539502-78539521 | None:intergenic | 30.0% | |
CAACTTTATTGGAAGAATGA+TGG | + | chr5.4:78539288-78539307 | None:intergenic | 30.0% | |
CAGTTAGAACCTTAATGTTT+GGG | - | chr5.4:78540535-78540554 | MS.gene074504:CDS | 30.0% | |
CCAAACTATTAAAAGAGGTT+TGG | + | chr5.4:78541344-78541363 | None:intergenic | 30.0% | |
CGTTTGAGTATATAATGAGA+TGG | + | chr5.4:78538294-78538313 | None:intergenic | 30.0% | |
GAAGAAGAAGATGATGATTT+GGG | - | chr5.4:78536560-78536579 | MS.gene074504:CDS | 30.0% | |
GATCGAACTTATCATCAATT+AGG | - | chr5.4:78540186-78540205 | MS.gene074504:CDS | 30.0% | |
GGTTAAAAACAACCGTAAAA+TGG | + | chr5.4:78538657-78538676 | None:intergenic | 30.0% | |
GTTAACACATTTGTGAAACT+CGG | + | chr5.4:78537662-78537681 | None:intergenic | 30.0% | |
TAAGCATATCACGAAACTTA+CGG | - | chr5.4:78541969-78541988 | MS.gene074504:CDS | 30.0% | |
TAATATCTTGCAGGATGATA+TGG | - | chr5.4:78541945-78541964 | MS.gene074504:CDS | 30.0% | |
TATAATGAGATGGAAGAGTA+AGG | + | chr5.4:78538284-78538303 | None:intergenic | 30.0% | |
TATATCTCTATTCTCTAGCA+TGG | + | chr5.4:78538734-78538753 | None:intergenic | 30.0% | |
TCAACAAAAATGAAGGTCAA+AGG | + | chr5.4:78539503-78539522 | None:intergenic | 30.0% | |
TCAAGCCAAACTATTAAAAG+AGG | + | chr5.4:78541349-78541368 | None:intergenic | 30.0% | |
TCAGACAATATCCAATCAAT+GGG | + | chr5.4:78541582-78541601 | None:intergenic | 30.0% | |
TCAGTTAGAACCTTAATGTT+TGG | - | chr5.4:78540534-78540553 | MS.gene074504:CDS | 30.0% | |
TGAAACTTATGATGTTGCAA+AGG | - | chr5.4:78538458-78538477 | MS.gene074504:intron | 30.0% | |
TGAACAGCAAAGAAGAAATT+AGG | + | chr5.4:78537217-78537236 | None:intergenic | 30.0% | |
TGGAAAGAATAACCCTATAA+AGG | + | chr5.4:78541520-78541539 | None:intergenic | 30.0% | |
TGTAAGAAGAGTAGATCAAA+TGG | - | chr5.4:78538963-78538982 | MS.gene074504:intron | 30.0% | |
TGTATAAATAAAGGGGAAAG+TGG | + | chr5.4:78539724-78539743 | None:intergenic | 30.0% | |
TTACTTTACTCATCCTATCT+TGG | + | chr5.4:78538777-78538796 | None:intergenic | 30.0% | |
TTGATCTACTCTTCTTACAA+CGG | + | chr5.4:78538962-78538981 | None:intergenic | 30.0% | |
TTGATTGTAGGAATTACATG+AGG | - | chr5.4:78537116-78537135 | MS.gene074504:intron | 30.0% | |
TTGCAACATCATAAGTTTCA+GGG | + | chr5.4:78538458-78538477 | None:intergenic | 30.0% | |
TTTAGACAGATATGATCTCA+GGG | - | chr5.4:78537726-78537745 | MS.gene074504:intron | 30.0% | |
TTTGCAACATCATAAGTTTC+AGG | + | chr5.4:78538459-78538478 | None:intergenic | 30.0% | |
! | ACAAATGCACAAAATTTTGG+TGG | - | chr5.4:78541134-78541153 | MS.gene074504:CDS | 30.0% |
! | AGCACAAATGCACAAAATTT+TGG | - | chr5.4:78541131-78541150 | MS.gene074504:CDS | 30.0% |
! | ATTTGCAATGTTTTTCCCTT+AGG | - | chr5.4:78540917-78540936 | MS.gene074504:CDS | 30.0% |
! | CCAAACCTCTTTTAATAGTT+TGG | - | chr5.4:78541341-78541360 | MS.gene074504:CDS | 30.0% |
! | GACCTCTAAATCTTTTCTAA+TGG | + | chr5.4:78539031-78539050 | None:intergenic | 30.0% |
! | GGTAGAATTTGATATTGGTT+TGG | - | chr5.4:78536463-78536482 | MS.gene074504:CDS | 30.0% |
! | GTTCTACATTCTTTTCTACT+AGG | - | chr5.4:78541449-78541468 | MS.gene074504:CDS | 30.0% |
! | TGGTTTTTGATAGAACACTA+TGG | - | chr5.4:78539070-78539089 | MS.gene074504:intron | 30.0% |
! | TTTGCAATGTTTTTCCCTTA+GGG | - | chr5.4:78540918-78540937 | MS.gene074504:CDS | 30.0% |
! | TTTTAGACAGATATGATCTC+AGG | - | chr5.4:78537725-78537744 | MS.gene074504:intron | 30.0% |
! | TTTTATGTTCTCCGTTAACT+CGG | - | chr5.4:78540650-78540669 | MS.gene074504:CDS | 30.0% |
!! | AATTTCTTCTTTGCTGTTCA+AGG | - | chr5.4:78537217-78537236 | MS.gene074504:intron | 30.0% |
!! | GCTCTGAAATTCAACTTTAT+TGG | + | chr5.4:78539299-78539318 | None:intergenic | 30.0% |
!! | TGAAATGGGTCAGTTATTTT+AGG | + | chr5.4:78539620-78539639 | None:intergenic | 30.0% |
!!! | GTTTGGCTTGAAGTTTTATT+TGG | - | chr5.4:78541358-78541377 | MS.gene074504:CDS | 30.0% |
AAAATGTGAAGTTCTTGGTC+AGG | + | chr5.4:78540691-78540710 | None:intergenic | 35.0% | |
AAATGTGAAGTTCTTGGTCA+GGG | + | chr5.4:78540690-78540709 | None:intergenic | 35.0% | |
AACCCTAATTGACACTTTAC+AGG | - | chr5.4:78537012-78537031 | MS.gene074504:intron | 35.0% | |
AAGAAAATGTGCAATTCCAG+AGG | - | chr5.4:78540491-78540510 | MS.gene074504:CDS | 35.0% | |
AAGAAGAGTAGATCAAATGG+AGG | - | chr5.4:78538966-78538985 | MS.gene074504:intron | 35.0% | |
AAGTTCGTTAGAGGGAAAAA+TGG | - | chr5.4:78540416-78540435 | MS.gene074504:CDS | 35.0% | |
AAGTTGAATTTCAGAGCACA+AGG | - | chr5.4:78539302-78539321 | MS.gene074504:intron | 35.0% | |
AATCTTCACCAAATAGCTTG+CGG | - | chr5.4:78539179-78539198 | MS.gene074504:intron | 35.0% | |
AATGACAGAATCATGATCAG+TGG | + | chr5.4:78537521-78537540 | None:intergenic | 35.0% | |
AATGTGTCTCGCAAATATAC+AGG | + | chr5.4:78537799-78537818 | None:intergenic | 35.0% | |
AATTCGTTTGTGCTAAGGAA+GGG | - | chr5.4:78536771-78536790 | MS.gene074504:intron | 35.0% | |
ACATATTCAGGGGAAGTTAA+AGG | - | chr5.4:78540009-78540028 | MS.gene074504:CDS | 35.0% | |
AGAAAATGGGTCAGTTATTC+CGG | + | chr5.4:78539585-78539604 | None:intergenic | 35.0% | |
AGAAAATGTGCAATTCCAGA+GGG | - | chr5.4:78540492-78540511 | MS.gene074504:CDS | 35.0% | |
AGAATCATGATCAGTGGTTA+TGG | + | chr5.4:78537515-78537534 | None:intergenic | 35.0% | |
AGATTTAGAGGTCAATGAGT+TGG | - | chr5.4:78539038-78539057 | MS.gene074504:intron | 35.0% | |
AGCATGAACTCTTACTTTGA+TGG | - | chr5.4:78537853-78537872 | MS.gene074504:intron | 35.0% | |
AGTTCGTTAGAGGGAAAAAT+GGG | - | chr5.4:78540417-78540436 | MS.gene074504:CDS | 35.0% | |
ATGATAAGTTCGATCTTCAG+AGG | + | chr5.4:78540181-78540200 | None:intergenic | 35.0% | |
ATGATGGTTTACACCAGTAA+AGG | + | chr5.4:78537383-78537402 | None:intergenic | 35.0% | |
ATTAAGGATGCATACTGTGT+TGG | - | chr5.4:78540883-78540902 | MS.gene074504:CDS | 35.0% | |
CAAAGTAGGTCAATTAAACC+GGG | - | chr5.4:78539768-78539787 | MS.gene074504:intron | 35.0% | |
CAAGTTAGAGTTGTCAGTAA+AGG | - | chr5.4:78542071-78542090 | MS.gene074504:CDS | 35.0% | |
CAATGAGAAAGAAGTAAGAG+CGG | - | chr5.4:78537942-78537961 | MS.gene074504:intron | 35.0% | |
CATTGAATCTTCACCAAGAT+AGG | - | chr5.4:78538761-78538780 | MS.gene074504:intron | 35.0% | |
CCAAAGTAGGTCAATTAAAC+CGG | - | chr5.4:78539767-78539786 | MS.gene074504:intron | 35.0% | |
CTCATTATATACTCAAACGC+TGG | - | chr5.4:78538295-78538314 | MS.gene074504:intron | 35.0% | |
CTTACCTTGAGAGCTAAAAA+GGG | + | chr5.4:78539450-78539469 | None:intergenic | 35.0% | |
CTTTATTGGAAGAATGATGG+TGG | + | chr5.4:78539285-78539304 | None:intergenic | 35.0% | |
GAAAATAGGCTTAGATGGTT+TGG | - | chr5.4:78538910-78538929 | MS.gene074504:intron | 35.0% | |
GACACGCAGAATATATTAGA+AGG | + | chr5.4:78541749-78541768 | None:intergenic | 35.0% | |
GACTCATAACTCAAAATGGT+TGG | + | chr5.4:78539862-78539881 | None:intergenic | 35.0% | |
GAGGTGGTAGAATTTGATAT+TGG | - | chr5.4:78536458-78536477 | MS.gene074504:CDS | 35.0% | |
GGCAACAATTCAATGTGATA+TGG | - | chr5.4:78541155-78541174 | MS.gene074504:CDS | 35.0% | |
GTCAGACAATATCCAATCAA+TGG | + | chr5.4:78541583-78541602 | None:intergenic | 35.0% | |
GTGTTGAATGAGTGTTTCAT+AGG | + | chr5.4:78539929-78539948 | None:intergenic | 35.0% | |
TAAAACCGTAGACATGTAGA+AGG | + | chr5.4:78539826-78539845 | None:intergenic | 35.0% | |
TACTTTCAGTTGTACAGCTT+AGG | - | chr5.4:78539409-78539428 | MS.gene074504:intron | 35.0% | |
TCATGTAGCTAAATTTGGAG+AGG | - | chr5.4:78538134-78538153 | MS.gene074504:intron | 35.0% | |
TCTGTGTGAAAAACCAAAGT+AGG | - | chr5.4:78539754-78539773 | MS.gene074504:intron | 35.0% | |
TGAATACTTTGCCAGTATTG+AGG | - | chr5.4:78537977-78537996 | MS.gene074504:intron | 35.0% | |
TGATGGTTTACACCAGTAAA+GGG | + | chr5.4:78537382-78537401 | None:intergenic | 35.0% | |
TGCAACATCATAAGTTTCAG+GGG | + | chr5.4:78538457-78538476 | None:intergenic | 35.0% | |
TGCTAACCACTTTATCATAG+AGG | + | chr5.4:78539240-78539259 | None:intergenic | 35.0% | |
TGGGAATACTTGCATTATAG+CGG | + | chr5.4:78537548-78537567 | None:intergenic | 35.0% | |
TGGTAGAAAATAGGCTTAGA+TGG | - | chr5.4:78538905-78538924 | MS.gene074504:intron | 35.0% | |
TTAAGGATGCATACTGTGTT+GGG | - | chr5.4:78540884-78540903 | MS.gene074504:CDS | 35.0% | |
TTAGAGCCTCTATGATAAAG+TGG | - | chr5.4:78539231-78539250 | MS.gene074504:intron | 35.0% | |
TTCCTTATCCATTAACCCTT+AGG | - | chr5.4:78540336-78540355 | MS.gene074504:CDS | 35.0% | |
TTCTCTAGCATGGTGAATTA+AGG | + | chr5.4:78538724-78538743 | None:intergenic | 35.0% | |
TTCTCTCTACCCAAACATTA+AGG | + | chr5.4:78540547-78540566 | None:intergenic | 35.0% | |
TTTACTGGTGTAAACCATCA+TGG | - | chr5.4:78537382-78537401 | MS.gene074504:intron | 35.0% | |
! | AAGAAATGAGAGAAAGCACA+TGG | + | chr5.4:78541808-78541827 | None:intergenic | 35.0% |
! | AATTTTCACTCGATTCCAAG+AGG | - | chr5.4:78538047-78538066 | MS.gene074504:intron | 35.0% |
! | AGAAATGAGAGAAAGCACAT+GGG | + | chr5.4:78541807-78541826 | None:intergenic | 35.0% |
! | AGCCTGTAAAGTGTCAATTA+GGG | + | chr5.4:78537017-78537036 | None:intergenic | 35.0% |
! | ATAGGAAGTGTGAAATGTAC+CGG | - | chr5.4:78542010-78542029 | MS.gene074504:CDS | 35.0% |
! | ATGTGGTATGTTGTGGATTT+TGG | - | chr5.4:78541075-78541094 | MS.gene074504:CDS | 35.0% |
! | ATTTTGTTCTTGCGTGCATT+TGG | - | chr5.4:78541679-78541698 | MS.gene074504:CDS | 35.0% |
! | CAATGAGTTGGATCCAAATA+TGG | - | chr5.4:78539050-78539069 | MS.gene074504:intron | 35.0% |
! | GAGGTCAGAATTCCATTTTA+CGG | - | chr5.4:78538642-78538661 | MS.gene074504:intron | 35.0% |
! | GAGTAACTAGCTTCTCAATT+GGG | + | chr5.4:78539978-78539997 | None:intergenic | 35.0% |
! | GTTTTTAACCTGTTCTACGA+TGG | - | chr5.4:78538667-78538686 | MS.gene074504:intron | 35.0% |
! | TAAGCACATCATGATGATGA+TGG | + | chr5.4:78541540-78541559 | None:intergenic | 35.0% |
! | TGAGTAACTAGCTTCTCAAT+TGG | + | chr5.4:78539979-78539998 | None:intergenic | 35.0% |
! | TGTCGCCTTGTAAACTTTTA+TGG | + | chr5.4:78537150-78537169 | None:intergenic | 35.0% |
!! | ACTGAATTGACTTGTAGATG+TGG | - | chr5.4:78541058-78541077 | MS.gene074504:CDS | 35.0% |
!! | GAATTTGATATTGGTTTGGG+AGG | - | chr5.4:78536467-78536486 | MS.gene074504:CDS | 35.0% |
!! | GTGCATTTTGACAGATAAAG+AGG | + | chr5.4:78536876-78536895 | None:intergenic | 35.0% |
!! | TGCCAAATGTTTGAGTTTTC+AGG | - | chr5.4:78538213-78538232 | MS.gene074504:intron | 35.0% |
AAACAGAGAGCAAGTTAGAC+CGG | + | chr5.4:78542032-78542051 | None:intergenic | 40.0% | |
AAACTGAAGCTTCCTTTGTC+TGG | - | chr5.4:78537443-78537462 | MS.gene074504:intron | 40.0% | |
AAAGCACAACCAAAGAGAAC+AGG | + | chr5.4:78537412-78537431 | None:intergenic | 40.0% | |
AAATGTGAGACAACTTCTCC+TGG | + | chr5.4:78537615-78537634 | None:intergenic | 40.0% | |
AACTCACCTCTACAATCCAT+TGG | + | chr5.4:78540393-78540412 | None:intergenic | 40.0% | |
AATGTGAAGTTCTTGGTCAG+GGG | + | chr5.4:78540689-78540708 | None:intergenic | 40.0% | |
ACTCACCTCTACAATCCATT+GGG | + | chr5.4:78540392-78540411 | None:intergenic | 40.0% | |
AGAATGTAGAACCTCGTCTT+AGG | + | chr5.4:78541441-78541460 | None:intergenic | 40.0% | |
AGACTAGACAGGATAGGATT+AGG | - | chr5.4:78538836-78538855 | MS.gene074504:intron | 40.0% | |
AGATGGAAGAGTAAGGACAT+TGG | + | chr5.4:78538277-78538296 | None:intergenic | 40.0% | |
AGGTTAAAAGAGGTAGAGGA+AGG | - | chr5.4:78538995-78539014 | MS.gene074504:intron | 40.0% | |
AGTCAGGTTAAAAGAGGTAG+AGG | - | chr5.4:78538991-78539010 | MS.gene074504:intron | 40.0% | |
AGTGATAGGAACCGAGTTAA+CGG | + | chr5.4:78540664-78540683 | None:intergenic | 40.0% | |
AGTGTAATTCAACCTTGCCT+TGG | + | chr5.4:78537293-78537312 | None:intergenic | 40.0% | |
ATAACATGCCATCGTAGAAC+AGG | + | chr5.4:78538678-78538697 | None:intergenic | 40.0% | |
ATCCTATCAGAGAGACCTAA+GGG | + | chr5.4:78540354-78540373 | None:intergenic | 40.0% | |
ATCTCAGTGCACTACCAATT+TGG | + | chr5.4:78540251-78540270 | None:intergenic | 40.0% | |
ATGAGCTTGAGTGTGCAAAT+AGG | - | chr5.4:78541992-78542011 | MS.gene074504:CDS | 40.0% | |
ATGATCTCAGGGACAATGAA+TGG | - | chr5.4:78537737-78537756 | MS.gene074504:intron | 40.0% | |
CAATTCGTTTGTGCTAAGGA+AGG | - | chr5.4:78536770-78536789 | MS.gene074504:intron | 40.0% | |
CCAGAATATGTCTGCAAAGA+AGG | + | chr5.4:78538239-78538258 | None:intergenic | 40.0% | |
CCATTAAGAGAATAGCCCAA+TGG | - | chr5.4:78540374-78540393 | MS.gene074504:CDS | 40.0% | |
CCATTGGGCTATTCTCTTAA+TGG | + | chr5.4:78540377-78540396 | None:intergenic | 40.0% | |
CCGGTTTAATTGACCTACTT+TGG | + | chr5.4:78539770-78539789 | None:intergenic | 40.0% | |
CCTTACCTTGAGAGCTAAAA+AGG | + | chr5.4:78539451-78539470 | None:intergenic | 40.0% | |
CCTTCTTTGCAGACATATTC+TGG | - | chr5.4:78538236-78538255 | MS.gene074504:intron | 40.0% | |
CTTGTAGATGTGGTATGTTG+TGG | - | chr5.4:78541068-78541087 | MS.gene074504:CDS | 40.0% | |
GAAAATGGGTCAGTTATTCC+GGG | + | chr5.4:78539584-78539603 | None:intergenic | 40.0% | |
GAAACTCGGCTTCAAAGTTT+GGG | + | chr5.4:78537648-78537667 | None:intergenic | 40.0% | |
GAGACAATTCGTTTGTGCTA+AGG | - | chr5.4:78536766-78536785 | MS.gene074504:intron | 40.0% | |
GATGAGTAAAGTAAGCGTAG+CGG | - | chr5.4:78538783-78538802 | MS.gene074504:intron | 40.0% | |
GCATATCTTTAAGCAATGCC+AGG | - | chr5.4:78537594-78537613 | MS.gene074504:intron | 40.0% | |
GCTTGAAGTACACGTCAATT+TGG | - | chr5.4:78540142-78540161 | MS.gene074504:CDS | 40.0% | |
GGAAAAATGGGAAACACATG+TGG | - | chr5.4:78540429-78540448 | MS.gene074504:CDS | 40.0% | |
GGATATTGTCTGACAGTTGT+TGG | - | chr5.4:78541589-78541608 | MS.gene074504:CDS | 40.0% | |
GGCCTGAAAACTCAAACATT+TGG | + | chr5.4:78538218-78538237 | None:intergenic | 40.0% | |
GGTAGCACCTATAGTAAAGT+TGG | - | chr5.4:78538885-78538904 | MS.gene074504:intron | 40.0% | |
GTAATCGATACCTGTTAGAG+CGG | + | chr5.4:78537351-78537370 | None:intergenic | 40.0% | |
GTGTAATTCAACCTTGCCTT+GGG | + | chr5.4:78537292-78537311 | None:intergenic | 40.0% | |
GTTAGAGTTGTCAGTAAAGG+TGG | - | chr5.4:78542074-78542093 | MS.gene074504:CDS | 40.0% | |
TAATTACACTAGTGGCTGTC+AGG | - | chr5.4:78538593-78538612 | MS.gene074504:intron | 40.0% | |
TATGGAATTCGAGTCTGAAG+AGG | - | chr5.4:78536646-78536665 | MS.gene074504:intron | 40.0% | |
TCGTCCATCATCTCAATATG+CGG | + | chr5.4:78536512-78536531 | None:intergenic | 40.0% | |
TCTGCACTCATCAAAGAGTA+TGG | - | chr5.4:78537064-78537083 | MS.gene074504:intron | 40.0% | |
TCTTCTTACAACGGCATCTA+CGG | + | chr5.4:78538953-78538972 | None:intergenic | 40.0% | |
TGAAACTCGGCTTCAAAGTT+TGG | + | chr5.4:78537649-78537668 | None:intergenic | 40.0% | |
TGTAATTCAACCTTGCCTTG+GGG | + | chr5.4:78537291-78537310 | None:intergenic | 40.0% | |
TGTGTCCTTCTACATGTCTA+CGG | - | chr5.4:78539818-78539837 | MS.gene074504:intron | 40.0% | |
TGTGTTGAAAAGCCAGACAA+AGG | + | chr5.4:78537458-78537477 | None:intergenic | 40.0% | |
TTGACGAATTTGAGTCTTGC+TGG | - | chr5.4:78537695-78537714 | MS.gene074504:intron | 40.0% | |
TTGCAGATCCAGAAATTTGC+CGG | + | chr5.4:78536991-78537010 | None:intergenic | 40.0% | |
! | AGATATGCCACTTGCAGAAA+CGG | + | chr5.4:78537582-78537601 | None:intergenic | 40.0% |
! | ATCCCATCACCAATGTTTTC+TGG | - | chr5.4:78537260-78537279 | MS.gene074504:intron | 40.0% |
! | CAGCCTGTAAAGTGTCAATT+AGG | + | chr5.4:78537018-78537037 | None:intergenic | 40.0% |
! | CGGAGGGAGTATATATTAGT+AGG | + | chr5.4:78539560-78539579 | None:intergenic | 40.0% |
! | GAAATGAGAGAAAGCACATG+GGG | + | chr5.4:78541806-78541825 | None:intergenic | 40.0% |
! | GACCTAAGGGTTAATGGATA+AGG | + | chr5.4:78540341-78540360 | None:intergenic | 40.0% |
! | GCTTTACTGAGGTTGATTGT+AGG | - | chr5.4:78537104-78537123 | MS.gene074504:intron | 40.0% |
! | TCCCATCACCAATGTTTTCT+GGG | - | chr5.4:78537261-78537280 | MS.gene074504:intron | 40.0% |
! | TGATCTAAGATAACTCCCTC+TGG | + | chr5.4:78540510-78540529 | None:intergenic | 40.0% |
!! | AATAGCCCAATGGATTGTAG+AGG | - | chr5.4:78540384-78540403 | MS.gene074504:CDS | 40.0% |
!! | AATGGATTGTAGAGGTGAGT+TGG | - | chr5.4:78540392-78540411 | MS.gene074504:CDS | 40.0% |
!! | TCCAAAGGTTTTGTGGATGA+GGG | - | chr5.4:78539358-78539377 | MS.gene074504:intron | 40.0% |
!! | TTGCAAACTGACGTTGCTTT+TGG | + | chr5.4:78538331-78538350 | None:intergenic | 40.0% |
!!! | CCTTTTTAGCTCTCAAGGTA+AGG | - | chr5.4:78539448-78539467 | MS.gene074504:intron | 40.0% |
!!! | CTCTGTTTTGAAAGCTGTTG+AGG | - | chr5.4:78542044-78542063 | MS.gene074504:CDS | 40.0% |
!!! | GGTAGTTTTGACTTGTGTGT+TGG | - | chr5.4:78539323-78539342 | MS.gene074504:intron | 40.0% |
!!! | TTGTCTGGCTTTTCAACACA+TGG | - | chr5.4:78537458-78537477 | MS.gene074504:intron | 40.0% |
AAACCTTTGGACTTGAGGTG+TGG | + | chr5.4:78539349-78539368 | None:intergenic | 45.0% | |
AACCCTTAGGTCTCTCTGAT+AGG | - | chr5.4:78540349-78540368 | MS.gene074504:CDS | 45.0% | |
AAGCAATACATTCCGCTTGC+AGG | - | chr5.4:78537764-78537783 | MS.gene074504:intron | 45.0% | |
AATATATACTCCCTCCGTCC+CGG | - | chr5.4:78539563-78539582 | MS.gene074504:intron | 45.0% | |
AATTCCTATGCTCGTCGTGT+TGG | - | chr5.4:78536686-78536705 | MS.gene074504:intron | 45.0% | |
ACACCAGTAAAGGGAGCAAA+GGG | + | chr5.4:78537373-78537392 | None:intergenic | 45.0% | |
ACACCATTAGAGAGAGAGTG+GGG | - | chr5.4:78538863-78538882 | MS.gene074504:intron | 45.0% | |
ACACTACTTACCGCTCTAAC+AGG | - | chr5.4:78537338-78537357 | MS.gene074504:intron | 45.0% | |
ACTTTACAGGCTGCTGGTAT+GGG | - | chr5.4:78537025-78537044 | MS.gene074504:intron | 45.0% | |
AGACTCGAATTCCATACCCT+CGG | + | chr5.4:78536642-78536661 | None:intergenic | 45.0% | |
AGAGTATGGTGGTATCAGCA+AGG | - | chr5.4:78537078-78537097 | MS.gene074504:intron | 45.0% | |
AGATCAAATGGAGGAGAGTC+AGG | - | chr5.4:78538975-78538994 | MS.gene074504:intron | 45.0% | |
AGATCCAGAAATTTGCCGGT+GGG | + | chr5.4:78536987-78537006 | None:intergenic | 45.0% | |
AGCCCAGAAAACATTGGTGA+TGG | + | chr5.4:78537266-78537285 | None:intergenic | 45.0% | |
AGTGCAGACATAATTCTGCG+AGG | + | chr5.4:78537052-78537071 | None:intergenic | 45.0% | |
ATCAGTGGTTATGGAGAGTG+GGG | + | chr5.4:78537506-78537525 | None:intergenic | 45.0% | |
ATCCAAAGCTGAGGATGATG+GGG | - | chr5.4:78538098-78538117 | MS.gene074504:intron | 45.0% | |
ATTCATGGCATCCAAAGCTG+AGG | - | chr5.4:78538089-78538108 | MS.gene074504:intron | 45.0% | |
ATTGACACTTTACAGGCTGC+TGG | - | chr5.4:78537019-78537038 | MS.gene074504:intron | 45.0% | |
CAGAGAGACCTAAGGGTTAA+TGG | + | chr5.4:78540347-78540366 | None:intergenic | 45.0% | |
CATCCAAAGCTGAGGATGAT+GGG | - | chr5.4:78538097-78538116 | MS.gene074504:intron | 45.0% | |
CATGGTCAACCTGTTCTCTT+TGG | - | chr5.4:78537400-78537419 | MS.gene074504:intron | 45.0% | |
CATGTAACTGATCCCACGTT+GGG | + | chr5.4:78541263-78541282 | None:intergenic | 45.0% | |
CCACAAAACCTTTGGACTTG+AGG | + | chr5.4:78539354-78539373 | None:intergenic | 45.0% | |
CTAACCTTCCCATTGCTGAT+GGG | + | chr5.4:78538543-78538562 | None:intergenic | 45.0% | |
CTTCAAAGTTTGGGAACTGG+AGG | + | chr5.4:78537639-78537658 | None:intergenic | 45.0% | |
CTTCTTACAACGGCATCTAC+GGG | + | chr5.4:78538952-78538971 | None:intergenic | 45.0% | |
GACACCATTAGAGAGAGAGT+GGG | - | chr5.4:78538862-78538881 | MS.gene074504:intron | 45.0% | |
GAGGAGAGTCAGGTTAAAAG+AGG | - | chr5.4:78538985-78539004 | MS.gene074504:intron | 45.0% | |
GAGTTGGCAAGTTCGTTAGA+GGG | - | chr5.4:78540408-78540427 | MS.gene074504:CDS | 45.0% | |
GATCAGTGGTTATGGAGAGT+GGG | + | chr5.4:78537507-78537526 | None:intergenic | 45.0% | |
GATCCTATCAGAGAGACCTA+AGG | + | chr5.4:78540355-78540374 | None:intergenic | 45.0% | |
GATGAGTGGTAAGACTAGAC+AGG | - | chr5.4:78538825-78538844 | MS.gene074504:intron | 45.0% | |
GCGTTTGATCTCTCTGTCTT+TGG | + | chr5.4:78536822-78536841 | None:intergenic | 45.0% | |
GGGTAGAGAGAAATGTCTCT+AGG | - | chr5.4:78540555-78540574 | MS.gene074504:CDS | 45.0% | |
GTAGGTCAATTAAACCGGGA+CGG | - | chr5.4:78539772-78539791 | MS.gene074504:intron | 45.0% | |
GTGGTAAGACTAGACAGGAT+AGG | - | chr5.4:78538830-78538849 | MS.gene074504:intron | 45.0% | |
TACACCAGTAAAGGGAGCAA+AGG | + | chr5.4:78537374-78537393 | None:intergenic | 45.0% | |
TATGGTGGTATCAGCAAGGT+TGG | - | chr5.4:78537082-78537101 | MS.gene074504:intron | 45.0% | |
TCCATCATCTCAATATGCGG+CGG | + | chr5.4:78536509-78536528 | None:intergenic | 45.0% | |
TCCCTCATCCACAAAACCTT+TGG | + | chr5.4:78539362-78539381 | None:intergenic | 45.0% | |
TGACACCATTAGAGAGAGAG+TGG | - | chr5.4:78538861-78538880 | MS.gene074504:intron | 45.0% | |
TGATCAGTGGTTATGGAGAG+TGG | + | chr5.4:78537508-78537527 | None:intergenic | 45.0% | |
TTACCCTTTGCTCCCTTTAC+TGG | - | chr5.4:78537367-78537386 | MS.gene074504:intron | 45.0% | |
TTCTTGCGTGCATTTGGTTG+AGG | - | chr5.4:78541685-78541704 | MS.gene074504:CDS | 45.0% | |
TTTGGGAGGAGAATATGAGG+AGG | - | chr5.4:78536481-78536500 | MS.gene074504:CDS | 45.0% | |
! | AAGCCTTATCCCACTAAGTG+GGG | + | chr5.4:78539119-78539138 | None:intergenic | 45.0% |
! | ACCAAATAGCTTGCGGTCTT+GGG | - | chr5.4:78539186-78539205 | MS.gene074504:intron | 45.0% |
! | AGAGAACAGGTTGACCATGA+TGG | + | chr5.4:78537399-78537418 | None:intergenic | 45.0% |
! | ATGCGTTTTCTTCCCAACGT+GGG | - | chr5.4:78541248-78541267 | MS.gene074504:CDS | 45.0% |
! | CAAGCCTTATCCCACTAAGT+GGG | + | chr5.4:78539120-78539139 | None:intergenic | 45.0% |
! | CCTCAAGTCCAAAGGTTTTG+TGG | - | chr5.4:78539351-78539370 | MS.gene074504:intron | 45.0% |
! | CTTGGGAGAGCATATGAATG+AGG | - | chr5.4:78538623-78538642 | MS.gene074504:intron | 45.0% |
! | GATGATTTGGGAGAAAGCAG+CGG | - | chr5.4:78536572-78536591 | MS.gene074504:CDS | 45.0% |
! | GCACTCATCAAAGAGTATGG+TGG | - | chr5.4:78537067-78537086 | MS.gene074504:intron | 45.0% |
! | GCCCAGAAAACATTGGTGAT+GGG | + | chr5.4:78537265-78537284 | None:intergenic | 45.0% |
! | TGAGTTGGCAAGTTCGTTAG+AGG | - | chr5.4:78540407-78540426 | MS.gene074504:CDS | 45.0% |
! | TGGTTTGGGAGGAGAATATG+AGG | - | chr5.4:78536478-78536497 | MS.gene074504:CDS | 45.0% |
!! | GCATATTGAGATGATGGACG+AGG | - | chr5.4:78536511-78536530 | MS.gene074504:CDS | 45.0% |
!! | GTCCAAAGGTTTTGTGGATG+AGG | - | chr5.4:78539357-78539376 | MS.gene074504:intron | 45.0% |
!! | TCAAGGTGATCTTGATGACG+AGG | - | chr5.4:78537234-78537253 | MS.gene074504:intron | 45.0% |
!! | TCTCTAGGAGCTTTTGCTCT+GGG | - | chr5.4:78540570-78540589 | MS.gene074504:CDS | 45.0% |
!!! | AGCTTTTGCTCTGGGATTAC+AGG | - | chr5.4:78540578-78540597 | MS.gene074504:CDS | 45.0% |
!!! | CACACCCTTTTTAGCTCTCA+AGG | - | chr5.4:78539443-78539462 | MS.gene074504:intron | 45.0% |
!!! | CTTTTGCTCTGGGATTACAG+GGG | - | chr5.4:78540580-78540599 | MS.gene074504:CDS | 45.0% |
!!! | GCTTTTGCTCTGGGATTACA+GGG | - | chr5.4:78540579-78540598 | MS.gene074504:CDS | 45.0% |
!! | AATTTATTAATAGAATTATA+TGG | - | chr5.4:78540850-78540869 | MS.gene074504:CDS | 5.0% |
!! | ATAATTCTATTAATAAATTT+GGG | + | chr5.4:78540849-78540868 | None:intergenic | 5.0% |
!! | TATAATTCTATTAATAAATT+TGG | + | chr5.4:78540850-78540869 | None:intergenic | 5.0% |
!!! | AATATCATAAATTTAAAATA+TGG | + | chr5.4:78541882-78541901 | None:intergenic | 5.0% |
AAATTTGCCGGTGGGAACGA+AGG | + | chr5.4:78536979-78536998 | None:intergenic | 50.0% | |
AACCTCGTCTTAGGTGCGTT+AGG | + | chr5.4:78541432-78541451 | None:intergenic | 50.0% | |
AACTCCCATCAGCAATGGGA+AGG | - | chr5.4:78538536-78538555 | MS.gene074504:intron | 50.0% | |
ACGAAGGCAGTGAACCTGAT+CGG | + | chr5.4:78536963-78536982 | None:intergenic | 50.0% | |
AGAAACGGTGACGAGTGTCT+GGG | + | chr5.4:78537567-78537586 | None:intergenic | 50.0% | |
AGCTGCAAAAAGAGTTGCGC+AGG | - | chr5.4:78538494-78538513 | MS.gene074504:intron | 50.0% | |
AGTTGCGCAGGTAATGCGAA+AGG | - | chr5.4:78538506-78538525 | MS.gene074504:intron | 50.0% | |
ATGGGTCAGTTATTCCGGGA+CGG | + | chr5.4:78539580-78539599 | None:intergenic | 50.0% | |
CAACCCTTGTGACTGTTCGT+GGG | + | chr5.4:78536844-78536863 | None:intergenic | 50.0% | |
CACCATTAGAGAGAGAGTGG+GGG | - | chr5.4:78538864-78538883 | MS.gene074504:intron | 50.0% | |
CACTCGATTCCAAGAGGAGT+TGG | - | chr5.4:78538053-78538072 | MS.gene074504:intron | 50.0% | |
CACTTTACAGGCTGCTGGTA+TGG | - | chr5.4:78537024-78537043 | MS.gene074504:intron | 50.0% | |
CAGATCCAGAAATTTGCCGG+TGG | + | chr5.4:78536988-78537007 | None:intergenic | 50.0% | |
CCAACGTGGGATCAGTTACA+TGG | - | chr5.4:78541261-78541280 | MS.gene074504:CDS | 50.0% | |
CCACTTAGTGGGATAAGGCT+TGG | - | chr5.4:78539118-78539137 | MS.gene074504:intron | 50.0% | |
CCATCAGCAATGGGAAGGTT+AGG | - | chr5.4:78538541-78538560 | MS.gene074504:intron | 50.0% | |
CCATGTAACTGATCCCACGT+TGG | + | chr5.4:78541264-78541283 | None:intergenic | 50.0% | |
CCTAACCTTCCCATTGCTGA+TGG | + | chr5.4:78538544-78538563 | None:intergenic | 50.0% | |
CGGCTTCAAAGTTTGGGAAC+TGG | + | chr5.4:78537642-78537661 | None:intergenic | 50.0% | |
CTTATCCCACTAAGTGGGGT+CGG | + | chr5.4:78539115-78539134 | None:intergenic | 50.0% | |
GAAACACATGTGGCAGAGAG+TGG | - | chr5.4:78540439-78540458 | MS.gene074504:CDS | 50.0% | |
GAAACCAACACGACGAGCAT+AGG | + | chr5.4:78536693-78536712 | None:intergenic | 50.0% | |
GAAGCCAGATACGATCCACT+TGG | + | chr5.4:78536909-78536928 | None:intergenic | 50.0% | |
GCATCCAAAGCTGAGGATGA+TGG | - | chr5.4:78538096-78538115 | MS.gene074504:intron | 50.0% | |
GCTATCACTTCGCTGAGTGA+TGG | + | chr5.4:78537836-78537855 | None:intergenic | 50.0% | |
GCTCTCAAGGTAAGGCTAGT+TGG | - | chr5.4:78539456-78539475 | MS.gene074504:intron | 50.0% | |
GGAGAACTCCCATCAGCAAT+GGG | - | chr5.4:78538532-78538551 | MS.gene074504:intron | 50.0% | |
GGCTGTCAGGATGAAAGCTT+GGG | - | chr5.4:78538606-78538625 | MS.gene074504:intron | 50.0% | |
GGTTGGCACGCTAACATTCA+TGG | - | chr5.4:78538074-78538093 | MS.gene074504:intron | 50.0% | |
GTCAATTAAACCGGGACGGA+GGG | - | chr5.4:78539776-78539795 | MS.gene074504:intron | 50.0% | |
TACCCCCACTCTCTCTCTAA+TGG | + | chr5.4:78538869-78538888 | None:intergenic | 50.0% | |
TACCTAACGCACCTAAGACG+AGG | - | chr5.4:78541427-78541446 | MS.gene074504:CDS | 50.0% | |
TCAGTGGTTATGGAGAGTGG+GGG | + | chr5.4:78537505-78537524 | None:intergenic | 50.0% | |
TCCCAAGACCGCAAGCTATT+TGG | + | chr5.4:78539190-78539209 | None:intergenic | 50.0% | |
TCGAATTCCATACCCTCGGA+AGG | + | chr5.4:78536638-78536657 | None:intergenic | 50.0% | |
TCGTCTTAGGTGCGTTAGGT+AGG | + | chr5.4:78541428-78541447 | None:intergenic | 50.0% | |
TCTGAATGATAGCTCCGTCG+CGG | + | chr5.4:78536748-78536767 | None:intergenic | 50.0% | |
TCTGCCAAGTGGATCGTATC+TGG | - | chr5.4:78536902-78536921 | MS.gene074504:intron | 50.0% | |
TGCACGATTCTTCTGCCAAG+TGG | - | chr5.4:78536891-78536910 | MS.gene074504:intron | 50.0% | |
TGGCTGTCAGGATGAAAGCT+TGG | - | chr5.4:78538605-78538624 | MS.gene074504:intron | 50.0% | |
! | AAGTAAGCGTAGCGGAGATG+CGG | - | chr5.4:78538791-78538810 | MS.gene074504:intron | 50.0% |
! | CACCAAATAGCTTGCGGTCT+TGG | - | chr5.4:78539185-78539204 | MS.gene074504:intron | 50.0% |
! | CCAAGCCTTATCCCACTAAG+TGG | + | chr5.4:78539121-78539140 | None:intergenic | 50.0% |
! | CGATTCCAAGAGGAGTTGGT+TGG | - | chr5.4:78538057-78538076 | MS.gene074504:intron | 50.0% |
! | GATGCGTTTTCTTCCCAACG+TGG | - | chr5.4:78541247-78541266 | MS.gene074504:CDS | 50.0% |
!! | CAGCAAGGTTGGCTTTACTG+AGG | - | chr5.4:78537093-78537112 | MS.gene074504:intron | 50.0% |
!! | GCTGTTTATTTTCCCGAGGC+CGG | - | chr5.4:78536602-78536621 | MS.gene074504:CDS | 50.0% |
!! | GTCTCTAGGAGCTTTTGCTC+TGG | - | chr5.4:78540569-78540588 | MS.gene074504:CDS | 50.0% |
!! | TGAGATGATGGACGAGGATG+AGG | - | chr5.4:78536517-78536536 | MS.gene074504:CDS | 50.0% |
!!! | CGGTGCTGTTTATTTTCCCG+AGG | - | chr5.4:78536598-78536617 | MS.gene074504:CDS | 50.0% |
AACGCCCACGAACAGTCACA+AGG | - | chr5.4:78536837-78536856 | MS.gene074504:intron | 55.0% | |
ACACATGTGGCAGAGAGTGG+TGG | - | chr5.4:78540442-78540461 | MS.gene074504:CDS | 55.0% | |
ACATGGCTTACCGCCATGTC+TGG | - | chr5.4:78537475-78537494 | MS.gene074504:intron | 55.0% | |
ACATTCCGCTTGCAGGCACT+GGG | - | chr5.4:78537771-78537790 | MS.gene074504:intron | 55.0% | |
ACGCCCACGAACAGTCACAA+GGG | - | chr5.4:78536838-78536857 | MS.gene074504:intron | 55.0% | |
ACTAAGTGGGGTCGGCTACA+TGG | + | chr5.4:78539107-78539126 | None:intergenic | 55.0% | |
AGGTGCGTTAGGTAGGTGTG+TGG | + | chr5.4:78541421-78541440 | None:intergenic | 55.0% | |
ATGTAGCCGACCCCACTTAG+TGG | - | chr5.4:78539106-78539125 | MS.gene074504:intron | 55.0% | |
ATTGAGGACCCCATCTCCGA+TGG | - | chr5.4:78537993-78538012 | MS.gene074504:intron | 55.0% | |
CACATGTGGCAGAGAGTGGT+GGG | - | chr5.4:78540443-78540462 | MS.gene074504:CDS | 55.0% | |
CAGAAACGGTGACGAGTGTC+TGG | + | chr5.4:78537568-78537587 | None:intergenic | 55.0% | |
CAGTGGTTATGGAGAGTGGG+GGG | + | chr5.4:78537504-78537523 | None:intergenic | 55.0% | |
CCAACCCTTGTGACTGTTCG+TGG | + | chr5.4:78536845-78536864 | None:intergenic | 55.0% | |
CCACGAACAGTCACAAGGGT+TGG | - | chr5.4:78536842-78536861 | MS.gene074504:intron | 55.0% | |
CGAAGGCAGTGAACCTGATC+GGG | + | chr5.4:78536962-78536981 | None:intergenic | 55.0% | |
CGACCCCACTTAGTGGGATA+AGG | - | chr5.4:78539113-78539132 | MS.gene074504:intron | 55.0% | |
CGAGTCTGAAGAGGCTGCTA+AGG | - | chr5.4:78536655-78536674 | MS.gene074504:intron | 55.0% | |
CGCAGGTAATGCGAAAGGAG+GGG | - | chr5.4:78538511-78538530 | MS.gene074504:intron | 55.0% | |
CGGATGTTGCGTTGGATGAG+TGG | - | chr5.4:78538811-78538830 | MS.gene074504:intron | 55.0% | |
CGTTCCCACCGGCAAATTTC+TGG | - | chr5.4:78536980-78536999 | MS.gene074504:intron | 55.0% | |
CTCCCCATCATCCTCAGCTT+TGG | + | chr5.4:78538103-78538122 | None:intergenic | 55.0% | |
CTCGGAAGGTTCCAGATCTC+CGG | + | chr5.4:78536624-78536643 | None:intergenic | 55.0% | |
CTCGTCACCGTTTCTGCAAG+TGG | - | chr5.4:78537572-78537591 | MS.gene074504:intron | 55.0% | |
CTTGCCTCTCCATCGGAGAT+GGG | + | chr5.4:78538005-78538024 | None:intergenic | 55.0% | |
CTTGGTCAGGGGAGAGTGAT+AGG | + | chr5.4:78540678-78540697 | None:intergenic | 55.0% | |
GATGATTACTCCCTCCGTCC+CGG | + | chr5.4:78539789-78539808 | None:intergenic | 55.0% | |
GCCGCCGCATATTGAGATGA+TGG | - | chr5.4:78536505-78536524 | MS.gene074504:CDS | 55.0% | |
GCGCAGGTAATGCGAAAGGA+GGG | - | chr5.4:78538510-78538529 | MS.gene074504:intron | 55.0% | |
GGAGATGGGGTCCTCAATAC+TGG | + | chr5.4:78537991-78538010 | None:intergenic | 55.0% | |
GGGAGAACTCCCATCAGCAA+TGG | - | chr5.4:78538531-78538550 | MS.gene074504:intron | 55.0% | |
GGGGTCAGCCCAGAAAACAT+TGG | + | chr5.4:78537272-78537291 | None:intergenic | 55.0% | |
GGTCAATTAAACCGGGACGG+AGG | - | chr5.4:78539775-78539794 | MS.gene074504:intron | 55.0% | |
GTCAGTTATTCCGGGACGGA+GGG | + | chr5.4:78539576-78539595 | None:intergenic | 55.0% | |
TACATTCCGCTTGCAGGCAC+TGG | - | chr5.4:78537770-78537789 | MS.gene074504:intron | 55.0% | |
TCGGATGCTTGCCTCTCCAT+CGG | + | chr5.4:78538012-78538031 | None:intergenic | 55.0% | |
TGCGCAGGTAATGCGAAAGG+AGG | - | chr5.4:78538509-78538528 | MS.gene074504:intron | 55.0% | |
TGGCCACACCTCAAGTCCAA+AGG | - | chr5.4:78539343-78539362 | MS.gene074504:intron | 55.0% | |
TGTAGCCGACCCCACTTAGT+GGG | - | chr5.4:78539107-78539126 | MS.gene074504:intron | 55.0% | |
TTCACTGCCTTCGTTCCCAC+CGG | - | chr5.4:78536969-78536988 | MS.gene074504:intron | 55.0% | |
TTGCCTCTCCATCGGAGATG+GGG | + | chr5.4:78538004-78538023 | None:intergenic | 55.0% | |
! | CGAACTTGTTCCACCCGATC+AGG | - | chr5.4:78536946-78536965 | MS.gene074504:intron | 55.0% |
! | GGAGATCTGGAACCTTCCGA+GGG | - | chr5.4:78536623-78536642 | MS.gene074504:intron | 55.0% |
! | TCTGGAACCTTCCGAGGGTA+TGG | - | chr5.4:78536628-78536647 | MS.gene074504:intron | 55.0% |
! | TGTTTTCTGGGCTGACCCCA+AGG | - | chr5.4:78537273-78537292 | MS.gene074504:intron | 55.0% |
!! | CAAAGCTGAGGATGATGGGG+AGG | - | chr5.4:78538101-78538120 | MS.gene074504:intron | 55.0% |
!! | GATGATGGACGAGGATGAGG+AGG | - | chr5.4:78536520-78536539 | MS.gene074504:CDS | 55.0% |
AGGCAGTGAACCTGATCGGG+TGG | + | chr5.4:78536959-78536978 | None:intergenic | 60.0% | |
AGGTACCCAGTGCCTGCAAG+CGG | + | chr5.4:78537779-78537798 | None:intergenic | 60.0% | |
AGGTTCCAGATCTCCGGCCT+CGG | + | chr5.4:78536618-78536637 | None:intergenic | 60.0% | |
CGGAGATGCGGATGTTGCGT+TGG | - | chr5.4:78538803-78538822 | MS.gene074504:intron | 60.0% | |
GCGTGCCAACCAACTCCTCT+TGG | + | chr5.4:78538065-78538084 | None:intergenic | 60.0% | |
GCTTGCCTCTCCATCGGAGA+TGG | + | chr5.4:78538006-78538025 | None:intergenic | 60.0% | |
GGTCAGTTATTCCGGGACGG+AGG | + | chr5.4:78539577-78539596 | None:intergenic | 60.0% | |
TTGGGAGAAAGCAGCGGCAG+CGG | - | chr5.4:78536578-78536597 | MS.gene074504:CDS | 60.0% | |
! | CGGAGATCTGGAACCTTCCG+AGG | - | chr5.4:78536622-78536641 | MS.gene074504:intron | 60.0% |
! | TTTTCCCGAGGCCGGAGATC+TGG | - | chr5.4:78536610-78536629 | MS.gene074504:intron | 60.0% |
GGACCCCATCTCCGATGGAG+AGG | - | chr5.4:78537998-78538017 | MS.gene074504:intron | 65.0% | |
GGTTCCAGATCTCCGGCCTC+GGG | + | chr5.4:78536617-78536636 | None:intergenic | 65.0% | |
TCTCGTCGTTCTCGCCGCGA+CGG | - | chr5.4:78536731-78536750 | MS.gene074504:intron | 65.0% | |
TCTGGGCTGACCCCAAGGCA+AGG | - | chr5.4:78537278-78537297 | MS.gene074504:intron | 65.0% | |
!! | GTGGCAGAGAGTGGTGGGTG+AGG | - | chr5.4:78540448-78540467 | MS.gene074504:CDS | 65.0% |
!! | GAGTGGGGGGCGTCCAGACA+TGG | + | chr5.4:78537491-78537510 | None:intergenic | 70.0% |
!! | TGGGGGGCGTCCAGACATGG+CGG | + | chr5.4:78537488-78537507 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.4 | gene | 78536449 | 78542131 | 78536449 | ID=MS.gene074504 |
chr5.4 | mRNA | 78536449 | 78542131 | 78536449 | ID=MS.gene074504.t1;Parent=MS.gene074504 |
chr5.4 | exon | 78539936 | 78542131 | 78539936 | ID=MS.gene074504.t1.exon1;Parent=MS.gene074504.t1 |
chr5.4 | CDS | 78539936 | 78542131 | 78539936 | ID=cds.MS.gene074504.t1;Parent=MS.gene074504.t1 |
chr5.4 | exon | 78536449 | 78536622 | 78536449 | ID=MS.gene074504.t1.exon2;Parent=MS.gene074504.t1 |
chr5.4 | CDS | 78536449 | 78536622 | 78536449 | ID=cds.MS.gene074504.t1;Parent=MS.gene074504.t1 |
Gene Sequence |
Protein sequence |