Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56339.t1 | XP_024634990.1 | 97.8 | 826 | 18 | 0 | 1 | 826 | 1 | 826 | 0.00E+00 | 1515 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56339.t1 | Q9LIE5 | 62.3 | 762 | 278 | 5 | 1 | 761 | 1 | 754 | 1.0e-276 | 954.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56339.t1 | A0A396IKX8 | 97.8 | 826 | 18 | 0 | 1 | 826 | 1 | 826 | 0.0e+00 | 1515.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene56339.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene56339 | 0.832372 | 9.81E-56 | -1.69E-46 |
| MS.gene04918 | MS.gene56339 | 0.801834 | 7.47E-49 | -1.69E-46 |
| MS.gene04920 | MS.gene56339 | 0.802088 | 6.62E-49 | -1.69E-46 |
| MS.gene049283 | MS.gene56339 | 0.833123 | 6.39E-56 | -1.69E-46 |
| MS.gene049368 | MS.gene56339 | 0.847429 | 1.16E-59 | -1.69E-46 |
| MS.gene049499 | MS.gene56339 | 0.82242 | 2.39E-53 | -1.69E-46 |
| MS.gene049983 | MS.gene56339 | 0.856069 | 4.13E-62 | -1.69E-46 |
| MS.gene050085 | MS.gene56339 | 0.807943 | 3.95E-50 | -1.69E-46 |
| MS.gene050213 | MS.gene56339 | 0.830957 | 2.19E-55 | -1.69E-46 |
| MS.gene050359 | MS.gene56339 | 0.804263 | 2.35E-49 | -1.69E-46 |
| MS.gene050414 | MS.gene56339 | 0.828491 | 8.73E-55 | -1.69E-46 |
| MS.gene050556 | MS.gene56339 | 0.823692 | 1.21E-53 | -1.69E-46 |
| MS.gene050646 | MS.gene56339 | 0.824304 | 8.68E-54 | -1.69E-46 |
| MS.gene050654 | MS.gene56339 | 0.857418 | 1.65E-62 | -1.69E-46 |
| MS.gene050737 | MS.gene56339 | 0.80863 | 2.82E-50 | -1.69E-46 |
| MS.gene050759 | MS.gene56339 | 0.81766 | 2.94E-52 | -1.69E-46 |
| MS.gene050931 | MS.gene56339 | 0.819042 | 1.43E-52 | -1.69E-46 |
| MS.gene050941 | MS.gene56339 | 0.848158 | 7.32E-60 | -1.69E-46 |
| MS.gene050962 | MS.gene56339 | 0.802305 | 5.98E-49 | -1.69E-46 |
| MS.gene051209 | MS.gene56339 | 0.807862 | 4.11E-50 | -1.69E-46 |
| MS.gene051343 | MS.gene56339 | 0.842054 | 3.27E-58 | -1.69E-46 |
| MS.gene051800 | MS.gene56339 | 0.800757 | 1.24E-48 | -1.69E-46 |
| MS.gene051856 | MS.gene56339 | 0.811019 | 8.63E-51 | -1.69E-46 |
| MS.gene051975 | MS.gene56339 | 0.800493 | 1.40E-48 | -1.69E-46 |
| MS.gene052016 | MS.gene56339 | 0.827688 | 1.36E-54 | -1.69E-46 |
| MS.gene052118 | MS.gene56339 | 0.801488 | 8.79E-49 | -1.69E-46 |
| MS.gene052242 | MS.gene56339 | -0.808405 | 3.15E-50 | -1.69E-46 |
| MS.gene052307 | MS.gene56339 | 0.8595 | 3.96E-63 | -1.69E-46 |
| MS.gene052342 | MS.gene56339 | 0.817155 | 3.82E-52 | -1.69E-46 |
| MS.gene052463 | MS.gene56339 | 0.822938 | 1.81E-53 | -1.69E-46 |
| MS.gene052609 | MS.gene56339 | 0.859025 | 5.50E-63 | -1.69E-46 |
| MS.gene052677 | MS.gene56339 | 0.800124 | 1.67E-48 | -1.69E-46 |
| MS.gene052775 | MS.gene56339 | 0.805416 | 1.35E-49 | -1.69E-46 |
| MS.gene052776 | MS.gene56339 | 0.835265 | 1.86E-56 | -1.69E-46 |
| MS.gene052994 | MS.gene56339 | 0.825158 | 5.46E-54 | -1.69E-46 |
| MS.gene053079 | MS.gene56339 | 0.861497 | 9.84E-64 | -1.69E-46 |
| MS.gene053143 | MS.gene56339 | 0.804324 | 2.28E-49 | -1.69E-46 |
| MS.gene053486 | MS.gene56339 | 0.802339 | 5.88E-49 | -1.69E-46 |
| MS.gene053620 | MS.gene56339 | 0.801536 | 8.60E-49 | -1.69E-46 |
| MS.gene053726 | MS.gene56339 | 0.847277 | 1.28E-59 | -1.69E-46 |
| MS.gene054178 | MS.gene56339 | 0.802831 | 4.66E-49 | -1.69E-46 |
| MS.gene054479 | MS.gene56339 | 0.839607 | 1.43E-57 | -1.69E-46 |
| MS.gene05458 | MS.gene56339 | 0.806707 | 7.22E-50 | -1.69E-46 |
| MS.gene054641 | MS.gene56339 | 0.800907 | 1.16E-48 | -1.69E-46 |
| MS.gene054824 | MS.gene56339 | 0.808289 | 3.33E-50 | -1.69E-46 |
| MS.gene054892 | MS.gene56339 | 0.829091 | 6.25E-55 | -1.69E-46 |
| MS.gene054893 | MS.gene56339 | 0.833759 | 4.43E-56 | -1.69E-46 |
| MS.gene054943 | MS.gene56339 | 0.806294 | 8.82E-50 | -1.69E-46 |
| MS.gene055311 | MS.gene56339 | 0.801565 | 8.48E-49 | -1.69E-46 |
| MS.gene055313 | MS.gene56339 | 0.808827 | 2.56E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene56339 | 0.855189 | 7.46E-62 | -1.69E-46 |
| MS.gene055724 | MS.gene56339 | 0.803708 | 3.06E-49 | -1.69E-46 |
| MS.gene055864 | MS.gene56339 | 0.823207 | 1.57E-53 | -1.69E-46 |
| MS.gene055926 | MS.gene56339 | 0.804525 | 2.07E-49 | -1.69E-46 |
| MS.gene056045 | MS.gene56339 | 0.846493 | 2.10E-59 | -1.69E-46 |
| MS.gene056097 | MS.gene56339 | 0.804353 | 2.25E-49 | -1.69E-46 |
| MS.gene056181 | MS.gene56339 | 0.832163 | 1.11E-55 | -1.69E-46 |
| MS.gene056308 | MS.gene56339 | 0.827133 | 1.85E-54 | -1.69E-46 |
| MS.gene056480 | MS.gene56339 | 0.803106 | 4.08E-49 | -1.69E-46 |
| MS.gene056507 | MS.gene56339 | 0.817925 | 2.56E-52 | -1.69E-46 |
| MS.gene056519 | MS.gene56339 | 0.809411 | 1.92E-50 | -1.69E-46 |
| MS.gene056699 | MS.gene56339 | 0.819987 | 8.70E-53 | -1.69E-46 |
| MS.gene056776 | MS.gene56339 | 0.82596 | 3.53E-54 | -1.69E-46 |
| MS.gene056787 | MS.gene56339 | 0.810798 | 9.64E-51 | -1.69E-46 |
| MS.gene056831 | MS.gene56339 | 0.868562 | 5.96E-66 | -1.69E-46 |
| MS.gene056973 | MS.gene56339 | 0.816003 | 6.92E-52 | -1.69E-46 |
| MS.gene057034 | MS.gene56339 | 0.822265 | 2.60E-53 | -1.69E-46 |
| MS.gene057102 | MS.gene56339 | 0.812273 | 4.61E-51 | -1.69E-46 |
| MS.gene057155 | MS.gene56339 | 0.836345 | 9.88E-57 | -1.69E-46 |
| MS.gene057869 | MS.gene56339 | 0.806705 | 7.23E-50 | -1.69E-46 |
| MS.gene057890 | MS.gene56339 | -0.834744 | 2.51E-56 | -1.69E-46 |
| MS.gene057893 | MS.gene56339 | -0.813581 | 2.38E-51 | -1.69E-46 |
| MS.gene057919 | MS.gene56339 | 0.826046 | 3.36E-54 | -1.69E-46 |
| MS.gene058010 | MS.gene56339 | 0.809865 | 1.53E-50 | -1.69E-46 |
| MS.gene058081 | MS.gene56339 | 0.807281 | 5.46E-50 | -1.69E-46 |
| MS.gene058159 | MS.gene56339 | 0.815276 | 1.00E-51 | -1.69E-46 |
| MS.gene058289 | MS.gene56339 | 0.812134 | 4.94E-51 | -1.69E-46 |
| MS.gene058292 | MS.gene56339 | 0.843434 | 1.40E-58 | -1.69E-46 |
| MS.gene058330 | MS.gene56339 | 0.809098 | 2.24E-50 | -1.69E-46 |
| MS.gene058429 | MS.gene56339 | 0.821456 | 4.00E-53 | -1.69E-46 |
| MS.gene058638 | MS.gene56339 | 0.834367 | 3.12E-56 | -1.69E-46 |
| MS.gene058639 | MS.gene56339 | 0.838032 | 3.66E-57 | -1.69E-46 |
| MS.gene058758 | MS.gene56339 | 0.801368 | 9.30E-49 | -1.69E-46 |
| MS.gene059007 | MS.gene56339 | 0.807205 | 5.66E-50 | -1.69E-46 |
| MS.gene059170 | MS.gene56339 | 0.819072 | 1.41E-52 | -1.69E-46 |
| MS.gene059283 | MS.gene56339 | 0.82302 | 1.73E-53 | -1.69E-46 |
| MS.gene059439 | MS.gene56339 | 0.820804 | 5.65E-53 | -1.69E-46 |
| MS.gene059725 | MS.gene56339 | 0.814586 | 1.43E-51 | -1.69E-46 |
| MS.gene059965 | MS.gene56339 | 0.81821 | 2.21E-52 | -1.69E-46 |
| MS.gene06010 | MS.gene56339 | 0.809732 | 1.64E-50 | -1.69E-46 |
| MS.gene060259 | MS.gene56339 | 0.812704 | 3.71E-51 | -1.69E-46 |
| MS.gene060296 | MS.gene56339 | 0.819088 | 1.40E-52 | -1.69E-46 |
| MS.gene060435 | MS.gene56339 | 0.834807 | 2.42E-56 | -1.69E-46 |
| MS.gene060520 | MS.gene56339 | 0.802988 | 4.32E-49 | -1.69E-46 |
| MS.gene06052 | MS.gene56339 | 0.827589 | 1.44E-54 | -1.69E-46 |
| MS.gene060777 | MS.gene56339 | 0.835361 | 1.75E-56 | -1.69E-46 |
| MS.gene060850 | MS.gene56339 | 0.809686 | 1.67E-50 | -1.69E-46 |
| MS.gene060851 | MS.gene56339 | 0.806745 | 7.09E-50 | -1.69E-46 |
| MS.gene060852 | MS.gene56339 | 0.803359 | 3.62E-49 | -1.69E-46 |
| MS.gene060932 | MS.gene56339 | 0.859045 | 5.43E-63 | -1.69E-46 |
| MS.gene060933 | MS.gene56339 | 0.87121 | 8.13E-67 | -1.69E-46 |
| MS.gene060935 | MS.gene56339 | 0.833792 | 4.35E-56 | -1.69E-46 |
| MS.gene060937 | MS.gene56339 | 0.849507 | 3.09E-60 | -1.69E-46 |
| MS.gene061006 | MS.gene56339 | 0.815447 | 9.20E-52 | -1.69E-46 |
| MS.gene061100 | MS.gene56339 | 0.846119 | 2.65E-59 | -1.69E-46 |
| MS.gene06121 | MS.gene56339 | 0.822425 | 2.39E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene56339 | MS.gene65386 | PPI |
| MS.gene56339 | MS.gene074504 | PPI |
| MS.gene56339 | MS.gene75807 | PPI |
| MS.gene56339 | MS.gene001194 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56339.t1 | MTR_6g051425 | 30.208 | 288 | 154 | 8 | 79 | 335 | 20 | 291 | 1.33e-28 | 118 |
| MS.gene56339.t1 | MTR_4g035820 | 28.996 | 269 | 148 | 9 | 71 | 310 | 70 | 324 | 5.27e-18 | 89.4 |
| MS.gene56339.t1 | MTR_1g008290 | 32.857 | 140 | 68 | 3 | 146 | 262 | 8 | 144 | 8.50e-17 | 78.6 |
| MS.gene56339.t1 | MTR_2g098880 | 33.333 | 123 | 71 | 1 | 74 | 196 | 59 | 170 | 1.59e-15 | 77.8 |
| MS.gene56339.t1 | MTR_2g098880 | 33.333 | 123 | 71 | 1 | 74 | 196 | 71 | 182 | 1.84e-15 | 77.8 |
| MS.gene56339.t1 | MTR_3g006370 | 33.333 | 126 | 72 | 1 | 75 | 200 | 49 | 162 | 1.11e-14 | 74.7 |
| MS.gene56339.t1 | MTR_7g446480 | 31.098 | 164 | 89 | 3 | 175 | 314 | 151 | 314 | 7.99e-14 | 73.9 |
| MS.gene56339.t1 | MTR_1g070355 | 25.377 | 398 | 245 | 16 | 27 | 391 | 18 | 396 | 1.24e-13 | 75.1 |
| MS.gene56339.t1 | MTR_6g022070 | 26.257 | 179 | 126 | 2 | 360 | 537 | 1 | 174 | 2.46e-13 | 72.8 |
| MS.gene56339.t1 | MTR_4g067290 | 26.486 | 185 | 103 | 5 | 54 | 238 | 35 | 186 | 5.08e-12 | 67.0 |
| MS.gene56339.t1 | MTR_4g067290 | 26.486 | 185 | 103 | 5 | 54 | 238 | 55 | 206 | 6.81e-12 | 67.0 |
| MS.gene56339.t1 | MTR_4g067290 | 27.222 | 180 | 98 | 5 | 54 | 233 | 95 | 241 | 7.89e-12 | 67.4 |
| MS.gene56339.t1 | MTR_4g067290 | 28.873 | 142 | 86 | 3 | 54 | 195 | 35 | 161 | 8.24e-12 | 66.6 |
| MS.gene56339.t1 | MTR_4g067290 | 28.873 | 142 | 86 | 3 | 54 | 195 | 55 | 181 | 1.01e-11 | 66.6 |
| MS.gene56339.t1 | MTR_4g067290 | 28.873 | 142 | 86 | 3 | 54 | 195 | 53 | 179 | 1.03e-11 | 66.6 |
| MS.gene56339.t1 | MTR_7g446510 | 30.120 | 166 | 92 | 3 | 173 | 314 | 164 | 329 | 1.15e-11 | 67.4 |
| MS.gene56339.t1 | MTR_2g098920 | 30.579 | 121 | 70 | 2 | 75 | 195 | 79 | 185 | 3.62e-11 | 65.1 |
| MS.gene56339.t1 | MTR_8g465780 | 25.949 | 158 | 103 | 3 | 437 | 580 | 1 | 158 | 5.18e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56339.t1 | AT3G22170 | 62.289 | 830 | 300 | 8 | 1 | 826 | 1 | 821 | 0.0 | 1060 |
| MS.gene56339.t1 | AT3G22170 | 62.289 | 830 | 300 | 8 | 1 | 826 | 1 | 821 | 0.0 | 1060 |
| MS.gene56339.t1 | AT4G15090 | 48.121 | 825 | 367 | 11 | 27 | 816 | 1 | 799 | 0.0 | 786 |
| MS.gene56339.t1 | AT4G15090 | 48.121 | 825 | 367 | 11 | 27 | 816 | 1 | 799 | 0.0 | 786 |
| MS.gene56339.t1 | AT4G15090 | 48.121 | 825 | 367 | 11 | 27 | 816 | 1 | 799 | 0.0 | 786 |
| MS.gene56339.t1 | AT4G15090 | 48.121 | 825 | 367 | 11 | 27 | 816 | 1 | 799 | 0.0 | 786 |
| MS.gene56339.t1 | AT4G15090 | 48.121 | 825 | 367 | 11 | 27 | 816 | 1 | 799 | 0.0 | 786 |
| MS.gene56339.t1 | AT1G76320 | 45.426 | 645 | 316 | 4 | 80 | 706 | 1 | 627 | 0.0 | 596 |
| MS.gene56339.t1 | AT1G76320 | 45.426 | 645 | 316 | 4 | 80 | 706 | 1 | 627 | 0.0 | 596 |
| MS.gene56339.t1 | AT1G76320 | 45.426 | 645 | 316 | 4 | 80 | 706 | 1 | 627 | 0.0 | 596 |
| MS.gene56339.t1 | AT1G76320 | 45.426 | 645 | 316 | 4 | 80 | 706 | 1 | 627 | 0.0 | 595 |
| MS.gene56339.t1 | AT4G19990 | 43.580 | 771 | 385 | 14 | 51 | 807 | 13 | 747 | 0.0 | 550 |
| MS.gene56339.t1 | AT4G19990 | 44.459 | 749 | 369 | 13 | 73 | 807 | 18 | 733 | 0.0 | 550 |
| MS.gene56339.t1 | AT4G19990 | 44.459 | 749 | 369 | 13 | 73 | 807 | 18 | 733 | 0.0 | 550 |
| MS.gene56339.t1 | AT4G19990 | 44.459 | 749 | 369 | 13 | 73 | 807 | 18 | 733 | 0.0 | 550 |
| MS.gene56339.t1 | AT4G19990 | 44.459 | 749 | 369 | 13 | 73 | 807 | 18 | 733 | 0.0 | 550 |
| MS.gene56339.t1 | AT4G19990 | 44.459 | 749 | 369 | 13 | 73 | 807 | 18 | 733 | 0.0 | 550 |
| MS.gene56339.t1 | AT2G32250 | 41.057 | 738 | 398 | 6 | 78 | 814 | 40 | 741 | 0.0 | 540 |
| MS.gene56339.t1 | AT2G32250 | 41.057 | 738 | 398 | 6 | 78 | 814 | 40 | 741 | 6.27e-180 | 539 |
| MS.gene56339.t1 | AT2G32250 | 41.057 | 738 | 398 | 6 | 78 | 814 | 40 | 741 | 6.27e-180 | 539 |
| MS.gene56339.t1 | AT2G32250 | 41.057 | 738 | 398 | 6 | 78 | 814 | 40 | 741 | 6.27e-180 | 539 |
| MS.gene56339.t1 | AT2G32250 | 41.033 | 736 | 397 | 6 | 80 | 814 | 1 | 700 | 2.15e-179 | 536 |
| MS.gene56339.t1 | AT2G32250 | 40.026 | 762 | 398 | 7 | 78 | 816 | 40 | 765 | 4.60e-179 | 536 |
| MS.gene56339.t1 | AT2G32250 | 40.026 | 762 | 398 | 7 | 78 | 816 | 40 | 765 | 4.60e-179 | 536 |
| MS.gene56339.t1 | AT2G32250 | 40.000 | 760 | 397 | 7 | 80 | 816 | 1 | 724 | 2.08e-178 | 533 |
| MS.gene56339.t1 | AT4G19990 | 43.768 | 706 | 350 | 13 | 116 | 807 | 4 | 676 | 4.25e-168 | 504 |
| MS.gene56339.t1 | AT4G38180 | 33.563 | 727 | 421 | 10 | 73 | 755 | 70 | 778 | 2.72e-135 | 422 |
| MS.gene56339.t1 | AT2G27110 | 32.424 | 623 | 362 | 9 | 75 | 675 | 48 | 633 | 3.98e-104 | 342 |
| MS.gene56339.t1 | AT2G27110 | 32.424 | 623 | 362 | 9 | 75 | 675 | 48 | 633 | 3.98e-104 | 342 |
| MS.gene56339.t1 | AT1G80010 | 30.094 | 638 | 387 | 9 | 76 | 673 | 95 | 713 | 1.29e-99 | 327 |
| MS.gene56339.t1 | AT1G52520 | 32.750 | 629 | 370 | 15 | 76 | 673 | 85 | 691 | 6.19e-99 | 324 |
| MS.gene56339.t1 | AT2G27110 | 35.684 | 468 | 286 | 6 | 219 | 680 | 34 | 492 | 6.45e-95 | 313 |
| MS.gene56339.t1 | AT3G06250 | 29.351 | 678 | 421 | 15 | 16 | 675 | 121 | 758 | 3.00e-88 | 297 |
| MS.gene56339.t1 | AT3G06250 | 30.120 | 166 | 87 | 2 | 65 | 230 | 17 | 153 | 6.97e-11 | 66.6 |
| MS.gene56339.t1 | AT3G06250 | 29.351 | 678 | 421 | 15 | 16 | 675 | 121 | 758 | 3.00e-88 | 297 |
| MS.gene56339.t1 | AT3G06250 | 30.120 | 166 | 87 | 2 | 65 | 230 | 17 | 153 | 6.97e-11 | 66.6 |
| MS.gene56339.t1 | AT3G06250 | 29.351 | 678 | 421 | 15 | 16 | 675 | 121 | 758 | 3.00e-88 | 297 |
| MS.gene56339.t1 | AT3G06250 | 30.120 | 166 | 87 | 2 | 65 | 230 | 17 | 153 | 6.97e-11 | 66.6 |
| MS.gene56339.t1 | AT5G18960 | 30.569 | 615 | 383 | 11 | 69 | 675 | 204 | 782 | 1.26e-86 | 293 |
| MS.gene56339.t1 | AT5G18960 | 32.061 | 131 | 63 | 1 | 72 | 202 | 39 | 143 | 3.42e-11 | 67.8 |
| MS.gene56339.t1 | AT5G18960 | 30.569 | 615 | 383 | 11 | 69 | 675 | 204 | 782 | 1.26e-86 | 293 |
| MS.gene56339.t1 | AT5G18960 | 32.061 | 131 | 63 | 1 | 72 | 202 | 39 | 143 | 3.42e-11 | 67.8 |
| MS.gene56339.t1 | AT4G38170 | 33.404 | 473 | 293 | 8 | 243 | 706 | 21 | 480 | 1.12e-83 | 278 |
| MS.gene56339.t1 | AT1G10240 | 27.176 | 655 | 412 | 20 | 73 | 686 | 45 | 675 | 2.70e-67 | 237 |
| MS.gene56339.t1 | AT1G10240 | 27.176 | 655 | 412 | 20 | 73 | 686 | 45 | 675 | 2.70e-67 | 237 |
| MS.gene56339.t1 | AT5G28530 | 27.059 | 595 | 367 | 15 | 71 | 622 | 50 | 620 | 4.23e-57 | 209 |
| MS.gene56339.t1 | AT5G28530 | 26.789 | 601 | 357 | 16 | 71 | 622 | 50 | 616 | 9.60e-57 | 207 |
| MS.gene56339.t1 | AT5G28530 | 26.789 | 601 | 357 | 16 | 71 | 622 | 50 | 616 | 9.60e-57 | 207 |
| MS.gene56339.t1 | AT5G28530 | 26.165 | 558 | 356 | 16 | 71 | 622 | 50 | 557 | 1.73e-44 | 171 |
| MS.gene56339.t1 | AT5G28530 | 26.241 | 564 | 344 | 18 | 71 | 622 | 50 | 553 | 3.92e-44 | 170 |
| MS.gene56339.t1 | AT2G43280 | 28.492 | 179 | 111 | 3 | 57 | 230 | 3 | 169 | 1.73e-15 | 76.6 |
| MS.gene56339.t1 | AT3G59470 | 30.935 | 139 | 82 | 2 | 57 | 195 | 51 | 175 | 5.07e-15 | 76.3 |
| MS.gene56339.t1 | AT3G59470 | 30.935 | 139 | 82 | 2 | 57 | 195 | 51 | 175 | 5.07e-15 | 76.3 |
| MS.gene56339.t1 | AT3G59470 | 30.935 | 139 | 82 | 2 | 57 | 195 | 63 | 187 | 5.89e-15 | 76.3 |
| MS.gene56339.t1 | AT3G07500 | 34.074 | 135 | 69 | 3 | 74 | 206 | 31 | 147 | 2.73e-14 | 73.6 |
| MS.gene56339.t1 | AT4G12850 | 33.600 | 125 | 66 | 3 | 67 | 190 | 1 | 109 | 3.59e-12 | 65.1 |
| MS.gene56339.t1 | AT4G12850 | 33.621 | 116 | 61 | 2 | 75 | 190 | 10 | 109 | 5.02e-12 | 64.7 |
| MS.gene56339.t1 | AT4G12850 | 33.621 | 116 | 61 | 2 | 75 | 190 | 10 | 109 | 6.24e-12 | 65.9 |
Find 182 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCGATAAAGTTCGTAATT+TGG | 0.150148 | 3.1:-6576860 | MS.gene56339:CDS |
| AGTTGATATTGCAATGTTTA+AGG | 0.172219 | 3.1:-6577352 | MS.gene56339:CDS |
| ACAAATCTTGAGCCACTTTC+TGG | 0.189659 | 3.1:-6577324 | MS.gene56339:CDS |
| CAATAGATGGGAGAAAATTT+TGG | 0.200841 | 3.1:-6576290 | MS.gene56339:CDS |
| CACTACCAATTTATATTACT+TGG | 0.214287 | 3.1:-6576598 | MS.gene56339:CDS |
| CGTAATTTGGGTCTGGAGTT+TGG | 0.217600 | 3.1:-6576847 | MS.gene56339:CDS |
| CTGGTTTCGCATACAACATT+AGG | 0.233730 | 3.1:-6574512 | MS.gene56339:CDS |
| GATTGTTCAGTTGAACTTAA+TGG | 0.243913 | 3.1:-6574832 | MS.gene56339:intron |
| TTGGTGGTTCTTCAATATTC+TGG | 0.244129 | 3.1:-6575746 | MS.gene56339:CDS |
| AGATACCCAAAGTAGAAATA+TGG | 0.254157 | 3.1:-6575429 | MS.gene56339:CDS |
| TATTTGCTTATGGCATATAC+TGG | 0.255412 | 3.1:-6576416 | MS.gene56339:CDS |
| GTAATTTGGGTCTGGAGTTT+GGG | 0.256919 | 3.1:-6576846 | MS.gene56339:CDS |
| TTCGATAAAGTTCGTAATTT+GGG | 0.268268 | 3.1:-6576859 | MS.gene56339:CDS |
| CTTGCCATTGTATTTGCTTA+TGG | 0.286247 | 3.1:-6576426 | MS.gene56339:CDS |
| CTTTCCCATATTTCTACTTT+GGG | 0.301786 | 3.1:+6575424 | None:intergenic |
| AAGTTTGCTTGTTCCAGATA+TGG | 0.304206 | 3.1:-6577177 | MS.gene56339:CDS |
| TGGTCAGTAATTATCACTTT+TGG | 0.304400 | 3.1:+6576493 | None:intergenic |
| CCTTTAGAAAAGAGTGTTGC+AGG | 0.305818 | 3.1:-6575989 | MS.gene56339:CDS |
| ATTGTTCAGTTGAACTTAAT+GGG | 0.306375 | 3.1:-6574831 | MS.gene56339:intron |
| CCATTGATCGAGCATATTCT+TGG | 0.307582 | 3.1:+6577262 | None:intergenic |
| ACCAGCCACGATGGTTATTA+TGG | 0.311286 | 3.1:-6574660 | MS.gene56339:CDS |
| AAGATCCAAGCTGAGATTAT+TGG | 0.311613 | 3.1:-6575941 | MS.gene56339:CDS |
| CACACCCAAGTAATATAAAT+TGG | 0.315083 | 3.1:+6576593 | None:intergenic |
| TTGTTTGTTCACTTACTGCC+TGG | 0.318808 | 3.1:+6576959 | None:intergenic |
| TGTCGGCTATTTGAATATAA+AGG | 0.333196 | 3.1:-6575788 | MS.gene56339:CDS |
| TCATCCTGCCTGTCAAGTTT+AGG | 0.337518 | 3.1:+6575902 | None:intergenic |
| TGTTCACAGGGTGCATGATA+TGG | 0.338272 | 3.1:-6575870 | MS.gene56339:CDS |
| TCAAAACTTGCAGGCACAAC+TGG | 0.340078 | 3.1:-6574547 | MS.gene56339:intron |
| ACTTTCCCATATTTCTACTT+TGG | 0.350583 | 3.1:+6575423 | None:intergenic |
| CAACTGGATTTCTTGCGAAC+TGG | 0.365489 | 3.1:-6574531 | MS.gene56339:CDS |
| CCTACAGAAGCTGGTACATC+AGG | 0.374818 | 3.1:-6575479 | MS.gene56339:CDS |
| GTAACCCTCGAAGGTTATTA+TGG | 0.378451 | 3.1:-6574961 | MS.gene56339:CDS |
| AAAGAAGGCAAGATGGGAAA+TGG | 0.381396 | 3.1:-6577029 | MS.gene56339:CDS |
| AAAGTGCCGCAACATATTCT+TGG | 0.383004 | 3.1:-6576555 | MS.gene56339:CDS |
| TGGTTTCGCATACAACATTA+GGG | 0.384517 | 3.1:-6574511 | MS.gene56339:intron |
| GGATCTTCTTGAATACTGTA+TGG | 0.385556 | 3.1:+6575957 | None:intergenic |
| CCATGACATGACTTTGAAAT+CGG | 0.385564 | 3.1:-6576473 | MS.gene56339:CDS |
| TTCATGAAGGATGTGTTCTT+AGG | 0.388405 | 3.1:-6576196 | MS.gene56339:CDS |
| ATATTACAAAATACTGGCCT+TGG | 0.392792 | 3.1:+6573833 | None:intergenic |
| CTTATATTTGTTTCTAACAT+AGG | 0.395042 | 3.1:+6576654 | None:intergenic |
| ATAAACTCAATTGGCCTTTG+AGG | 0.400241 | 3.1:+6573868 | None:intergenic |
| TCTTTGACAAATATGTTCAT+AGG | 0.403324 | 3.1:-6576132 | MS.gene56339:CDS |
| AGGCAGAAGTGATGAATGTT+GGG | 0.408722 | 3.1:-6575283 | MS.gene56339:CDS |
| AAGAAGGCAAGATGGGAAAT+GGG | 0.409702 | 3.1:-6577028 | MS.gene56339:CDS |
| ACAGTATGAAACCATCTTGC+AGG | 0.419590 | 3.1:-6576083 | MS.gene56339:CDS |
| TCGAGCTCGTGGTCGGTTGA+AGG | 0.420065 | 3.1:+6577131 | None:intergenic |
| TTTGCCAACATAAACTCAAT+TGG | 0.421446 | 3.1:+6573859 | None:intergenic |
| TGTATGAAGATCGCAAGTTA+TGG | 0.424995 | 3.1:-6576228 | MS.gene56339:CDS |
| ATTGAGGTACATGCTCTAAA+TGG | 0.425596 | 3.1:-6577396 | MS.gene56339:CDS |
| ACTTTGGGTATCTTCTTCAA+TGG | 0.429012 | 3.1:+6575439 | None:intergenic |
| AGCATTATATTACAAAATAC+TGG | 0.430310 | 3.1:+6573827 | None:intergenic |
| CCAAGAATATGCTCGATCAA+TGG | 0.430685 | 3.1:-6577262 | MS.gene56339:CDS |
| GTATGAAGATCGCAAGTTAT+GGG | 0.435215 | 3.1:-6576227 | MS.gene56339:CDS |
| ACATCAAAGCATGCCTGGTT+TGG | 0.435777 | 3.1:-6574634 | MS.gene56339:intron |
| CAAAAGCAGATTCTGATACT+TGG | 0.440513 | 3.1:-6576042 | MS.gene56339:CDS |
| GATACCCAAAGTAGAAATAT+GGG | 0.442097 | 3.1:-6575428 | MS.gene56339:CDS |
| CAAGAATATGCTCGATCAAT+GGG | 0.442288 | 3.1:-6577261 | MS.gene56339:CDS |
| GTAATATAAATTGGTAGTGC+TGG | 0.445832 | 3.1:+6576602 | None:intergenic |
| AATTGACACTTTCAGATCGT+TGG | 0.447716 | 3.1:+6576158 | None:intergenic |
| TAAAGTTCGTAATTTGGGTC+TGG | 0.453859 | 3.1:-6576854 | MS.gene56339:CDS |
| CAAGAATCTGAAAATTCAAC+TGG | 0.454460 | 3.1:-6577099 | MS.gene56339:CDS |
| TCTTGAGCCACTTTCTGGTA+TGG | 0.454926 | 3.1:-6577319 | MS.gene56339:CDS |
| ATGAAACCATCTTGCAGGAC+AGG | 0.466060 | 3.1:-6576078 | MS.gene56339:CDS |
| ACCATCGTGGCTGGTTGGTA+TGG | 0.466535 | 3.1:+6574668 | None:intergenic |
| GGGAATCAACAGACTCTTCA+AGG | 0.466578 | 3.1:-6574786 | MS.gene56339:CDS |
| GAGGCAGAAGTGATGAATGT+TGG | 0.469181 | 3.1:-6575284 | MS.gene56339:CDS |
| TATGGATTGATGCTAAAAGT+AGG | 0.472928 | 3.1:-6576720 | MS.gene56339:CDS |
| GGCACTTTCATCTGATATCA+AGG | 0.474717 | 3.1:+6576570 | None:intergenic |
| TGTTTGTTCACTTACTGCCT+GGG | 0.477529 | 3.1:+6576960 | None:intergenic |
| TTCATACCTGTCCTGCAAGA+TGG | 0.481351 | 3.1:+6576072 | None:intergenic |
| TGTTCACTTACTGCCTGGGC+TGG | 0.481371 | 3.1:+6576964 | None:intergenic |
| TTTGTATTCTGCAAACTGCC+TGG | 0.482219 | 3.1:+6576915 | None:intergenic |
| GGATAGATTTGAGCTTCGAC+AGG | 0.484930 | 3.1:-6576269 | MS.gene56339:CDS |
| TTCTTTCTCATGTTCACCAG+TGG | 0.488199 | 3.1:+6577515 | None:intergenic |
| GATCTTCTTGAATACTGTAT+GGG | 0.490261 | 3.1:+6575958 | None:intergenic |
| ATGAACATATTTGTCAAAGA+AGG | 0.490350 | 3.1:+6576135 | None:intergenic |
| ATTGACACTTTCAGATCGTT+GGG | 0.494400 | 3.1:+6576159 | None:intergenic |
| ATTTGCTTATGGCATATACT+GGG | 0.495990 | 3.1:-6576415 | MS.gene56339:CDS |
| AATCTGAACATATGCTGGCT+AGG | 0.505661 | 3.1:-6575646 | MS.gene56339:CDS |
| CTGGTTGGTATGGAACTCAT+TGG | 0.506086 | 3.1:+6574678 | None:intergenic |
| TCTTTCTCATGTTCACCAGT+GGG | 0.508767 | 3.1:+6577516 | None:intergenic |
| TGGTGCGCAACAGAGTGTGC+AGG | 0.511496 | 3.1:-6574941 | MS.gene56339:CDS |
| CAAATACAATGGCAAGCACT+AGG | 0.512004 | 3.1:+6576433 | None:intergenic |
| AGAAGAATCTGAACATATGC+TGG | 0.512248 | 3.1:-6575651 | MS.gene56339:CDS |
| GTATGGAATTCGAGTCTCAT+GGG | 0.513881 | 3.1:-6577302 | MS.gene56339:CDS |
| AGCAAGAGTCCTACAGAAGC+TGG | 0.514473 | 3.1:-6575488 | MS.gene56339:CDS |
| AAATTACGAACTTTATCGAA+TGG | 0.514738 | 3.1:+6576862 | None:intergenic |
| AACATTGCAATATCAACTGT+GGG | 0.516629 | 3.1:+6577357 | None:intergenic |
| ACTAGACAACATGCAACAAA+TGG | 0.519807 | 3.1:-6575258 | MS.gene56339:intron |
| GGACAAAAGATGCAAAAGTC+AGG | 0.522255 | 3.1:-6575685 | MS.gene56339:CDS |
| CGTTTCAAAACATATTGAGA+TGG | 0.523403 | 3.1:+6575710 | None:intergenic |
| GAATGTATGCTGTGATGGCC+AGG | 0.523831 | 3.1:-6576933 | MS.gene56339:CDS |
| TTATCTTTGTCGACATGCAT+TGG | 0.525970 | 3.1:-6575765 | MS.gene56339:CDS |
| GGTATGGAATTCGAGTCTCA+TGG | 0.526936 | 3.1:-6577303 | MS.gene56339:CDS |
| ATTGAGATGGGAACACTGAA+TGG | 0.527069 | 3.1:+6575723 | None:intergenic |
| GGTGCACATCAAAGCATGCC+TGG | 0.527959 | 3.1:-6574639 | MS.gene56339:CDS |
| AAAATTGCACAATGGAGGTA+TGG | 0.528216 | 3.1:-6577445 | MS.gene56339:CDS |
| ATGAGACAAACATTGTTCAC+AGG | 0.528939 | 3.1:-6575883 | MS.gene56339:CDS |
| CTTGTCATCCTAAACTTGAC+AGG | 0.529447 | 3.1:-6575910 | MS.gene56339:CDS |
| ACTACCAATTTATATTACTT+GGG | 0.533065 | 3.1:-6576597 | MS.gene56339:CDS |
| TGTTGGATTGTAGGTGAACT+CGG | 0.535610 | 3.1:-6575306 | MS.gene56339:intron |
| TCATCCTAAACTTGACAGGC+AGG | 0.538131 | 3.1:-6575906 | MS.gene56339:CDS |
| GCAGAATACAAAACTGTGGT+TGG | 0.538665 | 3.1:-6576904 | MS.gene56339:CDS |
| TGCATTCCATGCACTAAATG+AGG | 0.540583 | 3.1:-6575543 | MS.gene56339:CDS |
| AGGTATGGACGACAGACATA+TGG | 0.540778 | 3.1:-6577430 | MS.gene56339:CDS |
| GTTTCAAAACATATTGAGAT+GGG | 0.541753 | 3.1:+6575711 | None:intergenic |
| TCATCATGGATATAGATCTC+AGG | 0.543112 | 3.1:-6577542 | None:intergenic |
| GCTGGTACATCAGGGGCTCA+TGG | 0.543275 | 3.1:-6575470 | MS.gene56339:CDS |
| TCTTTGTCGACATGCATTGG+TGG | 0.544560 | 3.1:-6575762 | MS.gene56339:CDS |
| AAGGCCAATTGAGTTTATGT+TGG | 0.545117 | 3.1:-6573863 | MS.gene56339:CDS |
| TTCTGATACTTGGAATAAAG+TGG | 0.545659 | 3.1:-6576032 | MS.gene56339:CDS |
| ATCTGAACATATGCTGGCTA+GGG | 0.545736 | 3.1:-6575645 | MS.gene56339:CDS |
| ATGTATAGGCTAGGAAAATG+AGG | 0.546125 | 3.1:-6573927 | MS.gene56339:intron |
| AACACATCCTTCATGAATGT+TGG | 0.546900 | 3.1:+6576202 | None:intergenic |
| AGCTGAGATTATTGGTGCAG+TGG | 0.546997 | 3.1:-6575933 | MS.gene56339:CDS |
| CCAACACGTGATGATTACTA+CGG | 0.549419 | 3.1:-6574807 | MS.gene56339:CDS |
| GCGCACCATAATAACCTTCG+AGG | 0.551435 | 3.1:+6574956 | None:intergenic |
| TGCATCTATAAATTCTCTTG+AGG | 0.551832 | 3.1:+6577200 | None:intergenic |
| CTTATGGCATATACTGGGGA+AGG | 0.554219 | 3.1:-6576410 | MS.gene56339:CDS |
| ACCATAATAACCATCGTGGC+TGG | 0.555757 | 3.1:+6574659 | None:intergenic |
| TGCTCATCTGATGTAGAGAA+TGG | 0.557881 | 3.1:-6573895 | MS.gene56339:CDS |
| TGCTTGTTCTGTCGAGCTCG+TGG | 0.562836 | 3.1:+6577120 | None:intergenic |
| TAGATCTTGGTGAGGATCAA+CGG | 0.563870 | 3.1:-6576756 | MS.gene56339:CDS |
| TCGAATTCCATACCAGAAAG+TGG | 0.566016 | 3.1:+6577312 | None:intergenic |
| TGTGTGCCTCATTTAGTGCA+TGG | 0.566180 | 3.1:+6575537 | None:intergenic |
| ATGAAGGATGTGTTCTTAGG+TGG | 0.566472 | 3.1:-6576193 | MS.gene56339:CDS |
| TCACTAAAATTGAGCGAAGA+GGG | 0.566685 | 3.1:-6575593 | MS.gene56339:CDS |
| GACAGACATATGGTTGAAGC+TGG | 0.568268 | 3.1:-6577420 | MS.gene56339:CDS |
| TTTGGGTCTGGAGTTTGGGG+AGG | 0.569035 | 3.1:-6576842 | MS.gene56339:CDS |
| CTATTACAGACATGGCTGAA+AGG | 0.571735 | 3.1:-6576532 | MS.gene56339:CDS |
| TGTTCTGTCGAGCTCGTGGT+CGG | 0.571836 | 3.1:+6577124 | None:intergenic |
| TTTAACAAAATCTTGCACAT+AGG | 0.572860 | 3.1:+6576105 | None:intergenic |
| GCAACAGAGTGTGCAGGGAA+TGG | 0.572934 | 3.1:-6574935 | MS.gene56339:intron |
| TATGGTTGAAGCTGGTATTG+AGG | 0.573490 | 3.1:-6577412 | MS.gene56339:CDS |
| CTGCACCAATAATCTCAGCT+TGG | 0.574589 | 3.1:+6575936 | None:intergenic |
| AACTACACTTGATAACATGT+TGG | 0.575276 | 3.1:-6577478 | MS.gene56339:CDS |
| TCAACAGACTCTTCAAGGAC+TGG | 0.577433 | 3.1:-6574781 | MS.gene56339:intron |
| CTACAGAAGCTGGTACATCA+GGG | 0.582637 | 3.1:-6575478 | MS.gene56339:CDS |
| CTTTAGAAAAGAGTGTTGCA+GGG | 0.584026 | 3.1:-6575988 | MS.gene56339:CDS |
| CAGAGGTGTCTTGTATATGT+CGG | 0.585513 | 3.1:-6575805 | MS.gene56339:CDS |
| AAGAAGAATGTATGCTGTGA+TGG | 0.589551 | 3.1:-6576938 | MS.gene56339:CDS |
| AAACATTGCAATATCAACTG+TGG | 0.593917 | 3.1:+6577356 | None:intergenic |
| TAATTTGGGTCTGGAGTTTG+GGG | 0.596349 | 3.1:-6576845 | MS.gene56339:CDS |
| GGTGCGCAACAGAGTGTGCA+GGG | 0.598023 | 3.1:-6574940 | MS.gene56339:CDS |
| CCGATTTCAAAGTCATGTCA+TGG | 0.600152 | 3.1:+6576473 | None:intergenic |
| CAACACGTGATGATTACTAC+GGG | 0.600808 | 3.1:-6574806 | MS.gene56339:CDS |
| CAGACATGGCTGAAAGGTGT+AGG | 0.601180 | 3.1:-6576526 | MS.gene56339:CDS |
| TGCAAAAGTCAGGAATGTCA+CGG | 0.602820 | 3.1:-6575675 | MS.gene56339:CDS |
| GCAAAAGTCAGGAATGTCAC+GGG | 0.606359 | 3.1:-6575674 | MS.gene56339:CDS |
| TAATAACCATCGTGGCTGGT+TGG | 0.607504 | 3.1:+6574663 | None:intergenic |
| CCTGATGTACCAGCTTCTGT+AGG | 0.610024 | 3.1:+6575479 | None:intergenic |
| GGTTATTCATAGCTTTGCGA+AGG | 0.614290 | 3.1:-6577007 | MS.gene56339:CDS |
| TTTATGTTGGCAAATCTCCA+AGG | 0.615209 | 3.1:-6573850 | MS.gene56339:CDS |
| GCAGGACAGGTATGAAGAGG+AGG | 0.615423 | 3.1:-6576065 | MS.gene56339:CDS |
| CGCACCATAATAACCTTCGA+GGG | 0.615700 | 3.1:+6574957 | None:intergenic |
| ACACTTGATAACATGTTGGA+AGG | 0.620645 | 3.1:-6577474 | MS.gene56339:CDS |
| GAGGTACATGCTCTAAATGG+TGG | 0.620892 | 3.1:-6577393 | MS.gene56339:CDS |
| CATTGCAATATCAACTGTGG+GGG | 0.621147 | 3.1:+6577359 | None:intergenic |
| ATCACTAAAATTGAGCGAAG+AGG | 0.621826 | 3.1:-6575594 | MS.gene56339:CDS |
| GGTGAATGAAGTAAAATCAG+AGG | 0.623034 | 3.1:-6575822 | MS.gene56339:CDS |
| ATGGGCACCAACATTCATGA+AGG | 0.624807 | 3.1:-6576209 | MS.gene56339:CDS |
| ATTCTTGGCTATTACAGACA+TGG | 0.625085 | 3.1:-6576540 | MS.gene56339:CDS |
| TTATGCAGTAGATCTTGGTG+AGG | 0.626878 | 3.1:-6576764 | MS.gene56339:CDS |
| ATAGATCTCAGGTTACCCAC+TGG | 0.627040 | 3.1:-6577531 | MS.gene56339:CDS |
| CTTGCAGGACAGGTATGAAG+AGG | 0.628672 | 3.1:-6576068 | MS.gene56339:CDS |
| TAGAGAATGGAATACCTCAA+AGG | 0.631467 | 3.1:-6573882 | MS.gene56339:CDS |
| TCCATACCAACCAGCCACGA+TGG | 0.649328 | 3.1:-6574669 | MS.gene56339:CDS |
| TGAGACAAACATTGTTCACA+GGG | 0.652768 | 3.1:-6575882 | MS.gene56339:CDS |
| CCGTAGTAATCATCACGTGT+TGG | 0.653378 | 3.1:+6574807 | None:intergenic |
| TTAGTGAAACATACCAAACC+AGG | 0.659731 | 3.1:+6574621 | None:intergenic |
| TTTGCTTATGGCATATACTG+GGG | 0.662956 | 3.1:-6576414 | MS.gene56339:CDS |
| GGCAGAAGTGATGAATGTTG+GGG | 0.664453 | 3.1:-6575282 | MS.gene56339:CDS |
| ACATGGCTGAAAGGTGTAGG+TGG | 0.667199 | 3.1:-6576523 | MS.gene56339:CDS |
| TACAGAAGCTGGTACATCAG+GGG | 0.668012 | 3.1:-6575477 | MS.gene56339:CDS |
| TATGCCATAAGCAAATACAA+TGG | 0.671446 | 3.1:+6576422 | None:intergenic |
| AGAACTGCAGTAACCCTCGA+AGG | 0.680930 | 3.1:-6574970 | MS.gene56339:CDS |
| TATGGAATTCGAGTCTCATG+GGG | 0.685488 | 3.1:-6577301 | MS.gene56339:CDS |
| TAATAGCCAAGAATATGTTG+CGG | 0.691526 | 3.1:+6576549 | None:intergenic |
| ACATTGCAATATCAACTGTG+GGG | 0.697658 | 3.1:+6577358 | None:intergenic |
| GTTTGCAGAATACAAAACTG+TGG | 0.699066 | 3.1:-6576908 | MS.gene56339:CDS |
| TGGATTGTAGGTGAACTCGG+AGG | 0.756855 | 3.1:-6575303 | MS.gene56339:intron |
| GTGCACCATAATAACCATCG+TGG | 0.809451 | 3.1:+6574655 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAAAAAATGAGAATTTTA+TGG | - | chr3.1:6575006-6575025 | MS.gene56339:intron | 10.0% |
| !! | AAAAAAAAAAAAAATCCTCT+AGG | + | chr3.1:6576280-6576299 | None:intergenic | 15.0% |
| !! | TCACTATATACATTAAATTA+AGG | - | chr3.1:6577307-6577326 | MS.gene56339:CDS | 15.0% |
| !!! | TATAATGGTAATTTTTTGAA+CGG | + | chr3.1:6576919-6576938 | None:intergenic | 15.0% |
| !!! | TCACATTATTTTAAATGTAT+AGG | - | chr3.1:6577427-6577446 | MS.gene56339:CDS | 15.0% |
| !!! | TTCTCATTTTTTTTAATTAC+AGG | + | chr3.1:6575001-6575020 | None:intergenic | 15.0% |
| !! | ACTACCAATTTATATTACTT+GGG | - | chr3.1:6574771-6574790 | MS.gene56339:intron | 20.0% |
| !! | AGTTTGAAAAATGCATATAT+AGG | - | chr3.1:6575032-6575051 | MS.gene56339:intron | 20.0% |
| !!! | AATTTAGTTTACAAGATTGT+AGG | + | chr3.1:6577153-6577172 | None:intergenic | 20.0% |
| !!! | ATTTAGTTTACAAGATTGTA+GGG | + | chr3.1:6577152-6577171 | None:intergenic | 20.0% |
| !!! | CTTATATTTGTTTCTAACAT+AGG | + | chr3.1:6574717-6574736 | None:intergenic | 20.0% |
| !!! | GATCAAAGATTTAATTTTTC+AGG | + | chr3.1:6577005-6577024 | None:intergenic | 20.0% |
| !!! | GTTTTTTTTAACTAGATATG+AGG | + | chr3.1:6576221-6576240 | None:intergenic | 20.0% |
| !!! | TTATTTTAAATGTATAGGCT+AGG | - | chr3.1:6577432-6577451 | MS.gene56339:CDS | 20.0% |
| ! | AAAAACAATACAAGACTTGT+TGG | - | chr3.1:6576235-6576254 | MS.gene56339:CDS | 25.0% |
| ! | AAATTACGAACTTTATCGAA+TGG | + | chr3.1:6574509-6574528 | None:intergenic | 25.0% |
| ! | AGTATTCATCAAACATTACA+AGG | + | chr3.1:6576794-6576813 | None:intergenic | 25.0% |
| ! | ATATGATCAAACACTTTGAT+AGG | + | chr3.1:6576161-6576180 | None:intergenic | 25.0% |
| ! | ATGAACATATTTGTCAAAGA+AGG | + | chr3.1:6575236-6575255 | None:intergenic | 25.0% |
| ! | ATTCGATAAAGTTCGTAATT+TGG | - | chr3.1:6574508-6574527 | MS.gene56339:intron | 25.0% |
| ! | ATTGTTCAGTTGAACTTAAT+GGG | - | chr3.1:6576537-6576556 | MS.gene56339:CDS | 25.0% |
| ! | CACTACCAATTTATATTACT+TGG | - | chr3.1:6574770-6574789 | MS.gene56339:intron | 25.0% |
| ! | GAACGGTAATAATATCTAAA+AGG | + | chr3.1:6576902-6576921 | None:intergenic | 25.0% |
| ! | GAATCCAACTAAAAAGAAAA+AGG | - | chr3.1:6575981-6576000 | MS.gene56339:CDS | 25.0% |
| ! | GTATTCATCAAACATTACAA+GGG | + | chr3.1:6576793-6576812 | None:intergenic | 25.0% |
| ! | GTTTCAAAACATATTGAGAT+GGG | + | chr3.1:6575660-6575679 | None:intergenic | 25.0% |
| ! | GTTTGAGAAATTTCAATTCA+AGG | - | chr3.1:6577083-6577102 | MS.gene56339:CDS | 25.0% |
| ! | TCTTTGACAAATATGTTCAT+AGG | - | chr3.1:6575236-6575255 | MS.gene56339:intron | 25.0% |
| ! | TTCGATAAAGTTCGTAATTT+GGG | - | chr3.1:6574509-6574528 | MS.gene56339:intron | 25.0% |
| ! | TTGATCACATTAATCTTGTT+GGG | - | chr3.1:6577019-6577038 | MS.gene56339:CDS | 25.0% |
| ! | TTTAACAAAATCTTGCACAT+AGG | + | chr3.1:6575266-6575285 | None:intergenic | 25.0% |
| ! | TTTGATCACATTAATCTTGT+TGG | - | chr3.1:6577018-6577037 | MS.gene56339:CDS | 25.0% |
| !! | ACAAACTATTTTATGTGTGT+AGG | - | chr3.1:6576665-6576684 | MS.gene56339:CDS | 25.0% |
| !! | AGTGTTTGATCATATACTTT+TGG | - | chr3.1:6576166-6576185 | MS.gene56339:CDS | 25.0% |
| !! | AGTTGATATTGCAATGTTTA+AGG | - | chr3.1:6574016-6574035 | MS.gene56339:intron | 25.0% |
| !! | CAAACTATTTTATGTGTGTA+GGG | - | chr3.1:6576666-6576685 | MS.gene56339:CDS | 25.0% |
| !! | GAATCAACAAAATTTCAAGT+TGG | + | chr3.1:6577110-6577129 | None:intergenic | 25.0% |
| !! | TTAAAAGGAACTTCTTTTGT+AGG | - | chr3.1:6576361-6576380 | MS.gene56339:CDS | 25.0% |
| !!! | AGAAGTTCCTTTTAACTATA+AGG | + | chr3.1:6576356-6576375 | None:intergenic | 25.0% |
| !!! | CAAACCTTTTTCTTTTTAGT+TGG | + | chr3.1:6575988-6576007 | None:intergenic | 25.0% |
| !!! | CATCTCAATATGTTTTGAAA+CGG | - | chr3.1:6575659-6575678 | MS.gene56339:CDS | 25.0% |
| !!! | TGATGATTTTGACAATAGAT+GGG | - | chr3.1:6575066-6575085 | MS.gene56339:intron | 25.0% |
| !!! | TTTTTTATCAAGCATGAAGT+GGG | - | chr3.1:6576298-6576317 | MS.gene56339:CDS | 25.0% |
| !!! | TTTTTTTATCAAGCATGAAG+TGG | - | chr3.1:6576297-6576316 | MS.gene56339:CDS | 25.0% |
| AAACATTGCAATATCAACTG+TGG | + | chr3.1:6574015-6574034 | None:intergenic | 30.0% | |
| AACATTGCAATATCAACTGT+GGG | + | chr3.1:6574014-6574033 | None:intergenic | 30.0% | |
| ACGTCATCCTTATAGTTAAA+AGG | - | chr3.1:6576346-6576365 | MS.gene56339:CDS | 30.0% | |
| AGATACCCAAAGTAGAAATA+TGG | - | chr3.1:6575939-6575958 | MS.gene56339:CDS | 30.0% | |
| ATGTAAAAAGAAGGCAAGAT+GGG | - | chr3.1:6574333-6574352 | MS.gene56339:intron | 30.0% | |
| ATTTGCTTATGGCATATACT+GGG | - | chr3.1:6574953-6574972 | MS.gene56339:CDS | 30.0% | |
| CAACTGAACAATCAAATAAG+AGG | + | chr3.1:6576529-6576548 | None:intergenic | 30.0% | |
| CAAGAATCTGAAAATTCAAC+TGG | - | chr3.1:6574269-6574288 | MS.gene56339:intron | 30.0% | |
| CACACCCAAGTAATATAAAT+TGG | + | chr3.1:6574778-6574797 | None:intergenic | 30.0% | |
| CGTTTCAAAACATATTGAGA+TGG | + | chr3.1:6575661-6575680 | None:intergenic | 30.0% | |
| CTTATACAATCAAAACTTGC+AGG | - | chr3.1:6576812-6576831 | MS.gene56339:CDS | 30.0% | |
| GATACCCAAAGTAGAAATAT+GGG | - | chr3.1:6575940-6575959 | MS.gene56339:CDS | 30.0% | |
| GATAGGTTAACTAGTAATGT+AGG | + | chr3.1:6576144-6576163 | None:intergenic | 30.0% | |
| GATCTTCTTGAATACTGTAT+GGG | + | chr3.1:6575413-6575432 | None:intergenic | 30.0% | |
| GATTGTTCAGTTGAACTTAA+TGG | - | chr3.1:6576536-6576555 | MS.gene56339:CDS | 30.0% | |
| GTTATGACAGGAAGAATAAA+AGG | + | chr3.1:6576037-6576056 | None:intergenic | 30.0% | |
| TAATAGCCAAGAATATGTTG+CGG | + | chr3.1:6574822-6574841 | None:intergenic | 30.0% | |
| TATGCCATAAGCAAATACAA+TGG | + | chr3.1:6574949-6574968 | None:intergenic | 30.0% | |
| TATTTGCTTATGGCATATAC+TGG | - | chr3.1:6574952-6574971 | MS.gene56339:CDS | 30.0% | |
| TGAGCTTGTAGATTAAATAC+AGG | - | chr3.1:6576195-6576214 | MS.gene56339:CDS | 30.0% | |
| TGCATCTATAAATTCTCTTG+AGG | + | chr3.1:6574171-6574190 | None:intergenic | 30.0% | |
| TTCTGATACTTGGAATAAAG+TGG | - | chr3.1:6575336-6575355 | MS.gene56339:intron | 30.0% | |
| TTTGCCAACATAAACTCAAT+TGG | + | chr3.1:6577512-6577531 | None:intergenic | 30.0% | |
| ! | AACGGCTGAAAAATCTTTTA+TGG | - | chr3.1:6574630-6574649 | MS.gene56339:intron | 30.0% |
| ! | AACTACACTTGATAACATGT+TGG | - | chr3.1:6573890-6573909 | MS.gene56339:CDS | 30.0% |
| ! | ACTTTCCCATATTTCTACTT+TGG | + | chr3.1:6575948-6575967 | None:intergenic | 30.0% |
| ! | ATAATGTTGCTTCTTCATTG+TGG | - | chr3.1:6577221-6577240 | MS.gene56339:CDS | 30.0% |
| ! | ATACAACATTAGGGTTAGTA+TGG | - | chr3.1:6576866-6576885 | MS.gene56339:CDS | 30.0% |
| ! | ATATTACAAAATACTGGCCT+TGG | + | chr3.1:6577538-6577557 | None:intergenic | 30.0% |
| ! | ATTCTCTTGAGGTTTTTGAA+CGG | + | chr3.1:6574160-6574179 | None:intergenic | 30.0% |
| ! | CAATAGATGGGAGAAAATTT+TGG | - | chr3.1:6575078-6575097 | MS.gene56339:intron | 30.0% |
| ! | CTTTCCCATATTTCTACTTT+GGG | + | chr3.1:6575947-6575966 | None:intergenic | 30.0% |
| ! | TATGGATTGATGCTAAAAGT+AGG | - | chr3.1:6574648-6574667 | MS.gene56339:CDS | 30.0% |
| ! | TGGTCAGTAATTATCACTTT+TGG | + | chr3.1:6574878-6574897 | None:intergenic | 30.0% |
| ! | TGTCGGCTATTTGAATATAA+AGG | - | chr3.1:6575580-6575599 | MS.gene56339:CDS | 30.0% |
| ! | TTCTTTTATGCAGTAGATCT+TGG | - | chr3.1:6574599-6574618 | MS.gene56339:intron | 30.0% |
| !! | GTAATATAAATTGGTAGTGC+TGG | + | chr3.1:6574769-6574788 | None:intergenic | 30.0% |
| !! | GTGATGATTTTGACAATAGA+TGG | - | chr3.1:6575065-6575084 | MS.gene56339:intron | 30.0% |
| AAAATTGCACAATGGAGGTA+TGG | - | chr3.1:6573923-6573942 | MS.gene56339:intron | 35.0% | |
| AACACATCCTTCATGAATGT+TGG | + | chr3.1:6575169-6575188 | None:intergenic | 35.0% | |
| AAGAAGAATGTATGCTGTGA+TGG | - | chr3.1:6574430-6574449 | MS.gene56339:intron | 35.0% | |
| AAGATCCAAGCTGAGATTAT+TGG | - | chr3.1:6575427-6575446 | MS.gene56339:CDS | 35.0% | |
| AAGGCCAATTGAGTTTATGT+TGG | - | chr3.1:6577505-6577524 | MS.gene56339:CDS | 35.0% | |
| AATTGACACTTTCAGATCGT+TGG | + | chr3.1:6575213-6575232 | None:intergenic | 35.0% | |
| ACATTGCAATATCAACTGTG+GGG | + | chr3.1:6574013-6574032 | None:intergenic | 35.0% | |
| ACTAGACAACATGCAACAAA+TGG | - | chr3.1:6576110-6576129 | MS.gene56339:CDS | 35.0% | |
| ACTTTGGGTATCTTCTTCAA+TGG | + | chr3.1:6575932-6575951 | None:intergenic | 35.0% | |
| AGAAGAATCTGAACATATGC+TGG | - | chr3.1:6575717-6575736 | MS.gene56339:CDS | 35.0% | |
| AGGTTAACTAGTAATGTAGG+AGG | + | chr3.1:6576141-6576160 | None:intergenic | 35.0% | |
| ATCACTAAAATTGAGCGAAG+AGG | - | chr3.1:6575774-6575793 | MS.gene56339:CDS | 35.0% | |
| ATGAGACAAACATTGTTCAC+AGG | - | chr3.1:6575485-6575504 | MS.gene56339:CDS | 35.0% | |
| ATGTATAGGCTAGGAAAATG+AGG | - | chr3.1:6577441-6577460 | MS.gene56339:CDS | 35.0% | |
| ATTATAATCCTTGAAGTCGC+GGG | - | chr3.1:6576933-6576952 | MS.gene56339:CDS | 35.0% | |
| ATTCTTGGCTATTACAGACA+TGG | - | chr3.1:6574828-6574847 | MS.gene56339:intron | 35.0% | |
| ATTGACACTTTCAGATCGTT+GGG | + | chr3.1:6575212-6575231 | None:intergenic | 35.0% | |
| CAAAAGCAGATTCTGATACT+TGG | - | chr3.1:6575326-6575345 | MS.gene56339:intron | 35.0% | |
| CAAGAATATGCTCGATCAAT+GGG | - | chr3.1:6574107-6574126 | MS.gene56339:intron | 35.0% | |
| CAAGCATGCATGTAAAAAGA+AGG | - | chr3.1:6574324-6574343 | MS.gene56339:intron | 35.0% | |
| CATGTAAAAAGAAGGCAAGA+TGG | - | chr3.1:6574332-6574351 | MS.gene56339:intron | 35.0% | |
| CATTATAATCCTTGAAGTCG+CGG | - | chr3.1:6576932-6576951 | MS.gene56339:CDS | 35.0% | |
| CTTGCCATTGTATTTGCTTA+TGG | - | chr3.1:6574942-6574961 | MS.gene56339:CDS | 35.0% | |
| GAAGAAAAATTGCACAATGG+AGG | - | chr3.1:6573918-6573937 | MS.gene56339:CDS | 35.0% | |
| GGATCTTCTTGAATACTGTA+TGG | + | chr3.1:6575414-6575433 | None:intergenic | 35.0% | |
| GGTGAAGAAAAATTGCACAA+TGG | - | chr3.1:6573915-6573934 | MS.gene56339:CDS | 35.0% | |
| GGTGAATGAAGTAAAATCAG+AGG | - | chr3.1:6575546-6575565 | MS.gene56339:CDS | 35.0% | |
| GTATGAAGATCGCAAGTTAT+GGG | - | chr3.1:6575141-6575160 | MS.gene56339:intron | 35.0% | |
| GTTTGCAGAATACAAAACTG+TGG | - | chr3.1:6574460-6574479 | MS.gene56339:intron | 35.0% | |
| TAAAGTTCGTAATTTGGGTC+TGG | - | chr3.1:6574514-6574533 | MS.gene56339:CDS | 35.0% | |
| TACTATATACGTGAACCTAG+AGG | - | chr3.1:6576262-6576281 | MS.gene56339:CDS | 35.0% | |
| TAGAGAATGGAATACCTCAA+AGG | - | chr3.1:6577486-6577505 | MS.gene56339:CDS | 35.0% | |
| TCACTAAAATTGAGCGAAGA+GGG | - | chr3.1:6575775-6575794 | MS.gene56339:CDS | 35.0% | |
| TGAGACAAACATTGTTCACA+GGG | - | chr3.1:6575486-6575505 | MS.gene56339:CDS | 35.0% | |
| TGGTTTCGCATACAACATTA+GGG | - | chr3.1:6576857-6576876 | MS.gene56339:CDS | 35.0% | |
| TGTATGAAGATCGCAAGTTA+TGG | - | chr3.1:6575140-6575159 | MS.gene56339:intron | 35.0% | |
| TTAGTGAAACATACCAAACC+AGG | + | chr3.1:6576750-6576769 | None:intergenic | 35.0% | |
| TTATCTTTGTCGACATGCAT+TGG | - | chr3.1:6575603-6575622 | MS.gene56339:CDS | 35.0% | |
| TTCATGAAGGATGTGTTCTT+AGG | - | chr3.1:6575172-6575191 | MS.gene56339:intron | 35.0% | |
| TTTATGTTGGCAAATCTCCA+AGG | - | chr3.1:6577518-6577537 | MS.gene56339:CDS | 35.0% | |
| TTTGCTTATGGCATATACTG+GGG | - | chr3.1:6574954-6574973 | MS.gene56339:CDS | 35.0% | |
| ! | AAGTTTGCTTGTTCCAGATA+TGG | - | chr3.1:6574191-6574210 | MS.gene56339:intron | 35.0% |
| ! | ACACTTGATAACATGTTGGA+AGG | - | chr3.1:6573894-6573913 | MS.gene56339:CDS | 35.0% |
| ! | ATTGAGGTACATGCTCTAAA+TGG | - | chr3.1:6573972-6573991 | MS.gene56339:intron | 35.0% |
| ! | TTGGTGGTTCTTCAATATTC+TGG | - | chr3.1:6575622-6575641 | MS.gene56339:CDS | 35.0% |
| !! | ACACTCTTTTCTAAAGGTGA+AGG | + | chr3.1:6575376-6575395 | None:intergenic | 35.0% |
| !! | ATAAACTCAATTGGCCTTTG+AGG | + | chr3.1:6577503-6577522 | None:intergenic | 35.0% |
| !! | CCATGACATGACTTTGAAAT+CGG | - | chr3.1:6574895-6574914 | MS.gene56339:intron | 35.0% |
| !! | CTTTAGAAAAGAGTGTTGCA+GGG | - | chr3.1:6575380-6575399 | MS.gene56339:intron | 35.0% |
| !! | GACTCTGAAATTGTCTCAAA+CGG | - | chr3.1:6577053-6577072 | MS.gene56339:CDS | 35.0% |
| !!! | AAACAGAGACTTTTTTGTCG+TGG | - | chr3.1:6575525-6575544 | MS.gene56339:CDS | 35.0% |
| !!! | CTCAATATGTTTTGAAACGG+TGG | - | chr3.1:6575662-6575681 | MS.gene56339:CDS | 35.0% |
| AAAGAAGGCAAGATGGGAAA+TGG | - | chr3.1:6574339-6574358 | MS.gene56339:intron | 40.0% | |
| AACTGTGGTGCTCTTACATT+AGG | + | chr3.1:6577256-6577275 | None:intergenic | 40.0% | |
| AAGAAGGCAAGATGGGAAAT+GGG | - | chr3.1:6574340-6574359 | MS.gene56339:intron | 40.0% | |
| ACAGTATGAAACCATCTTGC+AGG | - | chr3.1:6575285-6575304 | MS.gene56339:CDS | 40.0% | |
| AGGCAGAAGTGATGAATGTT+GGG | - | chr3.1:6576085-6576104 | MS.gene56339:CDS | 40.0% | |
| AGTTCACCTACAATCCAACA+AGG | + | chr3.1:6576062-6576081 | None:intergenic | 40.0% | |
| ATGAAGGATGTGTTCTTAGG+TGG | - | chr3.1:6575175-6575194 | MS.gene56339:intron | 40.0% | |
| ATTGAGATGGGAACACTGAA+TGG | + | chr3.1:6575648-6575667 | None:intergenic | 40.0% | |
| CAAATACAATGGCAAGCACT+AGG | + | chr3.1:6574938-6574957 | None:intergenic | 40.0% | |
| CAACACGTGATGATTACTAC+GGG | - | chr3.1:6576562-6576581 | MS.gene56339:CDS | 40.0% | |
| CATTGCAATATCAACTGTGG+GGG | + | chr3.1:6574012-6574031 | None:intergenic | 40.0% | |
| CCAACACGTGATGATTACTA+CGG | - | chr3.1:6576561-6576580 | MS.gene56339:CDS | 40.0% | |
| CCAAGAATATGCTCGATCAA+TGG | - | chr3.1:6574106-6574125 | MS.gene56339:intron | 40.0% | |
| CCATTGATCGAGCATATTCT+TGG | + | chr3.1:6574109-6574128 | None:intergenic | 40.0% | |
| CCGATTTCAAAGTCATGTCA+TGG | + | chr3.1:6574898-6574917 | None:intergenic | 40.0% | |
| CGCGACTTCAAGGATTATAA+TGG | + | chr3.1:6576934-6576953 | None:intergenic | 40.0% | |
| CTATTACAGACATGGCTGAA+AGG | - | chr3.1:6574836-6574855 | MS.gene56339:intron | 40.0% | |
| CTGGTTTCGCATACAACATT+AGG | - | chr3.1:6576856-6576875 | MS.gene56339:CDS | 40.0% | |
| CTTGTCATCCTAAACTTGAC+AGG | - | chr3.1:6575458-6575477 | MS.gene56339:CDS | 40.0% | |
| GCAGAATACAAAACTGTGGT+TGG | - | chr3.1:6574464-6574483 | MS.gene56339:intron | 40.0% | |
| GGACAAAAGATGCAAAAGTC+AGG | - | chr3.1:6575683-6575702 | MS.gene56339:CDS | 40.0% | |
| GGCACTTTCATCTGATATCA+AGG | + | chr3.1:6574801-6574820 | None:intergenic | 40.0% | |
| GTAACCCTCGAAGGTTATTA+TGG | - | chr3.1:6576407-6576426 | MS.gene56339:CDS | 40.0% | |
| GTATGGAATTCGAGTCTCAT+GGG | - | chr3.1:6574066-6574085 | MS.gene56339:intron | 40.0% | |
| TAACCTCCTTGTTGGATTGT+AGG | - | chr3.1:6576053-6576072 | MS.gene56339:CDS | 40.0% | |
| TAGATCTTGGTGAGGATCAA+CGG | - | chr3.1:6574612-6574631 | MS.gene56339:intron | 40.0% | |
| TATGGAATTCGAGTCTCATG+GGG | - | chr3.1:6574067-6574086 | MS.gene56339:intron | 40.0% | |
| TATGGTTGAAGCTGGTATTG+AGG | - | chr3.1:6573956-6573975 | MS.gene56339:intron | 40.0% | |
| TCGAATTCCATACCAGAAAG+TGG | + | chr3.1:6574059-6574078 | None:intergenic | 40.0% | |
| TCTTTCTCATGTTCACCAGT+GGG | + | chr3.1:6573855-6573874 | None:intergenic | 40.0% | |
| TGCAAAAGTCAGGAATGTCA+CGG | - | chr3.1:6575693-6575712 | MS.gene56339:CDS | 40.0% | |
| TGCATTCCATGCACTAAATG+AGG | - | chr3.1:6575825-6575844 | MS.gene56339:CDS | 40.0% | |
| TGCTCATCTGATGTAGAGAA+TGG | - | chr3.1:6577473-6577492 | MS.gene56339:CDS | 40.0% | |
| TGTTGGATTGTAGGTGAACT+CGG | - | chr3.1:6576062-6576081 | MS.gene56339:CDS | 40.0% | |
| TGTTTGTTCACTTACTGCCT+GGG | + | chr3.1:6574411-6574430 | None:intergenic | 40.0% | |
| TTATAATCCTTGAAGTCGCG+GGG | - | chr3.1:6576934-6576953 | MS.gene56339:CDS | 40.0% | |
| TTATGCAGTAGATCTTGGTG+AGG | - | chr3.1:6574604-6574623 | MS.gene56339:intron | 40.0% | |
| TTCTTTCTCATGTTCACCAG+TGG | + | chr3.1:6573856-6573875 | None:intergenic | 40.0% | |
| TTGTTTGTTCACTTACTGCC+TGG | + | chr3.1:6574412-6574431 | None:intergenic | 40.0% | |
| TTTGTATTCTGCAAACTGCC+TGG | + | chr3.1:6574456-6574475 | None:intergenic | 40.0% | |
| ! | AATCTGAACATATGCTGGCT+AGG | - | chr3.1:6575722-6575741 | MS.gene56339:CDS | 40.0% |
| ! | ACAAATCTTGAGCCACTTTC+TGG | - | chr3.1:6574044-6574063 | MS.gene56339:intron | 40.0% |
| ! | ATCTGAACATATGCTGGCTA+GGG | - | chr3.1:6575723-6575742 | MS.gene56339:CDS | 40.0% |
| ! | CCTGCAACACTCTTTTCTAA+AGG | + | chr3.1:6575382-6575401 | None:intergenic | 40.0% |
| ! | GGTTATTCATAGCTTTGCGA+AGG | - | chr3.1:6574361-6574380 | MS.gene56339:intron | 40.0% |
| ! | GTAATTTGGGTCTGGAGTTT+GGG | - | chr3.1:6574522-6574541 | MS.gene56339:CDS | 40.0% |
| ! | TAATTTGGGTCTGGAGTTTG+GGG | - | chr3.1:6574523-6574542 | MS.gene56339:CDS | 40.0% |
| !! | AAAGTGCCGCAACATATTCT+TGG | - | chr3.1:6574813-6574832 | MS.gene56339:CDS | 40.0% |
| !! | ATGCCTCTTGCACTTTTTGT+TGG | - | chr3.1:6574737-6574756 | MS.gene56339:intron | 40.0% |
| !! | CAGAGGTGTCTTGTATATGT+CGG | - | chr3.1:6575563-6575582 | MS.gene56339:CDS | 40.0% |
| !! | CCTTTAGAAAAGAGTGTTGC+AGG | - | chr3.1:6575379-6575398 | MS.gene56339:intron | 40.0% |
| !! | CTCTCGTTTTGTTCCATATC+TGG | + | chr3.1:6574207-6574226 | None:intergenic | 40.0% |
| !! | TGCCTCTTGCACTTTTTGTT+GGG | - | chr3.1:6574738-6574757 | MS.gene56339:intron | 40.0% |
| ACATCAAAGCATGCCTGGTT+TGG | - | chr3.1:6576734-6576753 | MS.gene56339:CDS | 45.0% | |
| ACCAGCCACGATGGTTATTA+TGG | - | chr3.1:6576708-6576727 | MS.gene56339:CDS | 45.0% | |
| ACCATAATAACCATCGTGGC+TGG | + | chr3.1:6576712-6576731 | None:intergenic | 45.0% | |
| AGCTGAGATTATTGGTGCAG+TGG | - | chr3.1:6575435-6575454 | MS.gene56339:CDS | 45.0% | |
| AGGTATGGACGACAGACATA+TGG | - | chr3.1:6573938-6573957 | MS.gene56339:intron | 45.0% | |
| ATAGATCTCAGGTTACCCAC+TGG | - | chr3.1:6573837-6573856 | MS.gene56339:CDS | 45.0% | |
| ATGAAACCATCTTGCAGGAC+AGG | - | chr3.1:6575290-6575309 | MS.gene56339:CDS | 45.0% | |
| ATGGGCACCAACATTCATGA+AGG | - | chr3.1:6575159-6575178 | MS.gene56339:intron | 45.0% | |
| CAACTGGATTTCTTGCGAAC+TGG | - | chr3.1:6576837-6576856 | MS.gene56339:CDS | 45.0% | |
| CCGTAGTAATCATCACGTGT+TGG | + | chr3.1:6576564-6576583 | None:intergenic | 45.0% | |
| CGCACCATAATAACCTTCGA+GGG | + | chr3.1:6576414-6576433 | None:intergenic | 45.0% | |
| CTACAGAAGCTGGTACATCA+GGG | - | chr3.1:6575890-6575909 | MS.gene56339:CDS | 45.0% | |
| CTGCACCAATAATCTCAGCT+TGG | + | chr3.1:6575435-6575454 | None:intergenic | 45.0% | |
| CTTATGGCATATACTGGGGA+AGG | - | chr3.1:6574958-6574977 | MS.gene56339:CDS | 45.0% | |
| GACAGACATATGGTTGAAGC+TGG | - | chr3.1:6573948-6573967 | MS.gene56339:intron | 45.0% | |
| GAGGCAGAAGTGATGAATGT+TGG | - | chr3.1:6576084-6576103 | MS.gene56339:CDS | 45.0% | |
| GATGGATCTTCGTGTAACTG+TGG | + | chr3.1:6577271-6577290 | None:intergenic | 45.0% | |
| GCAAAAGTCAGGAATGTCAC+GGG | - | chr3.1:6575694-6575713 | MS.gene56339:CDS | 45.0% | |
| GGATAGATTTGAGCTTCGAC+AGG | - | chr3.1:6575099-6575118 | MS.gene56339:intron | 45.0% | |
| GGCAGAAGTGATGAATGTTG+GGG | - | chr3.1:6576086-6576105 | MS.gene56339:CDS | 45.0% | |
| GGGAATCAACAGACTCTTCA+AGG | - | chr3.1:6576582-6576601 | MS.gene56339:CDS | 45.0% | |
| GGTATGGAATTCGAGTCTCA+TGG | - | chr3.1:6574065-6574084 | MS.gene56339:intron | 45.0% | |
| GTGCACCATAATAACCATCG+TGG | + | chr3.1:6576716-6576735 | None:intergenic | 45.0% | |
| TAATAACCATCGTGGCTGGT+TGG | + | chr3.1:6576708-6576727 | None:intergenic | 45.0% | |
| TACAGAAGCTGGTACATCAG+GGG | - | chr3.1:6575891-6575910 | MS.gene56339:CDS | 45.0% | |
| TCAAAACTTGCAGGCACAAC+TGG | - | chr3.1:6576821-6576840 | MS.gene56339:CDS | 45.0% | |
| TCAACAGACTCTTCAAGGAC+TGG | - | chr3.1:6576587-6576606 | MS.gene56339:CDS | 45.0% | |
| TCACCTACAATCCAACAAGG+AGG | + | chr3.1:6576059-6576078 | None:intergenic | 45.0% | |
| TCATCCTAAACTTGACAGGC+AGG | - | chr3.1:6575462-6575481 | MS.gene56339:CDS | 45.0% | |
| TCATCCTGCCTGTCAAGTTT+AGG | + | chr3.1:6575469-6575488 | None:intergenic | 45.0% | |
| TCCAACAAGGAGGTTATGAC+AGG | + | chr3.1:6576049-6576068 | None:intergenic | 45.0% | |
| TCCTGTCATAACCTCCTTGT+TGG | - | chr3.1:6576045-6576064 | MS.gene56339:CDS | 45.0% | |
| TCTTTGTCGACATGCATTGG+TGG | - | chr3.1:6575606-6575625 | MS.gene56339:CDS | 45.0% | |
| TGTGTGCCTCATTTAGTGCA+TGG | + | chr3.1:6575834-6575853 | None:intergenic | 45.0% | |
| TGTTCACAGGGTGCATGATA+TGG | - | chr3.1:6575498-6575517 | MS.gene56339:CDS | 45.0% | |
| TTCATACCTGTCCTGCAAGA+TGG | + | chr3.1:6575299-6575318 | None:intergenic | 45.0% | |
| ! | ACCCCAACAAAAAGTGCAAG+AGG | + | chr3.1:6574743-6574762 | None:intergenic | 45.0% |
| ! | CGTAATTTGGGTCTGGAGTT+TGG | - | chr3.1:6574521-6574540 | MS.gene56339:CDS | 45.0% |
| ! | CTGGTTGGTATGGAACTCAT+TGG | + | chr3.1:6576693-6576712 | None:intergenic | 45.0% |
| ! | GAGGTACATGCTCTAAATGG+TGG | - | chr3.1:6573975-6573994 | MS.gene56339:intron | 45.0% |
| ! | GGACTGGTGTGTAGAAGAAA+TGG | - | chr3.1:6576603-6576622 | MS.gene56339:CDS | 45.0% |
| ! | TCTTGAGCCACTTTCTGGTA+TGG | - | chr3.1:6574049-6574068 | MS.gene56339:intron | 45.0% |
| ! | TGTTGCTTCTTCATTGTGGC+AGG | - | chr3.1:6577225-6577244 | MS.gene56339:CDS | 45.0% |
| !! | GCCTCTTGCACTTTTTGTTG+GGG | - | chr3.1:6574739-6574758 | MS.gene56339:intron | 45.0% |
| AGAACTGCAGTAACCCTCGA+AGG | - | chr3.1:6576398-6576417 | MS.gene56339:CDS | 50.0% | |
| AGCAAGAGTCCTACAGAAGC+TGG | - | chr3.1:6575880-6575899 | MS.gene56339:CDS | 50.0% | |
| CCTACAGAAGCTGGTACATC+AGG | - | chr3.1:6575889-6575908 | MS.gene56339:CDS | 50.0% | |
| CCTGATGTACCAGCTTCTGT+AGG | + | chr3.1:6575892-6575911 | None:intergenic | 50.0% | |
| CTTGCAGGACAGGTATGAAG+AGG | - | chr3.1:6575300-6575319 | MS.gene56339:intron | 50.0% | |
| GAATGTATGCTGTGATGGCC+AGG | - | chr3.1:6574435-6574454 | MS.gene56339:intron | 50.0% | |
| GCGCACCATAATAACCTTCG+AGG | + | chr3.1:6576415-6576434 | None:intergenic | 50.0% | |
| TGGATTGTAGGTGAACTCGG+AGG | - | chr3.1:6576065-6576084 | MS.gene56339:CDS | 50.0% | |
| ! | ACATGGCTGAAAGGTGTAGG+TGG | - | chr3.1:6574845-6574864 | MS.gene56339:intron | 50.0% |
| ! | CAGACATGGCTGAAAGGTGT+AGG | - | chr3.1:6574842-6574861 | MS.gene56339:intron | 50.0% |
| ! | TCACGAACTTTTACCAGCCC+AGG | - | chr3.1:6574391-6574410 | MS.gene56339:intron | 50.0% |
| ATCCTTGAAGTCGCGGGGAT+CGG | - | chr3.1:6576939-6576958 | MS.gene56339:CDS | 55.0% | |
| GCAACAGAGTGTGCAGGGAA+TGG | - | chr3.1:6576433-6576452 | MS.gene56339:CDS | 55.0% | |
| GCAGGACAGGTATGAAGAGG+AGG | - | chr3.1:6575303-6575322 | MS.gene56339:intron | 55.0% | |
| GGTGCACATCAAAGCATGCC+TGG | - | chr3.1:6576729-6576748 | MS.gene56339:CDS | 55.0% | |
| TCCATACCAACCAGCCACGA+TGG | - | chr3.1:6576699-6576718 | MS.gene56339:CDS | 55.0% | |
| TGCTTGTTCTGTCGAGCTCG+TGG | + | chr3.1:6574251-6574270 | None:intergenic | 55.0% | |
| TGTTCACTTACTGCCTGGGC+TGG | + | chr3.1:6574407-6574426 | None:intergenic | 55.0% | |
| TGTTCTGTCGAGCTCGTGGT+CGG | + | chr3.1:6574247-6574266 | None:intergenic | 55.0% | |
| ! | ACCATCGTGGCTGGTTGGTA+TGG | + | chr3.1:6576703-6576722 | None:intergenic | 55.0% |
| ! | TTTGGGTCTGGAGTTTGGGG+AGG | - | chr3.1:6574526-6574545 | MS.gene56339:CDS | 55.0% |
| GACGCTCAAGCGTGTCTCGA+TGG | + | chr3.1:6577289-6577308 | None:intergenic | 60.0% | |
| GCTGGTACATCAGGGGCTCA+TGG | - | chr3.1:6575898-6575917 | MS.gene56339:CDS | 60.0% | |
| GGTGCGCAACAGAGTGTGCA+GGG | - | chr3.1:6576428-6576447 | MS.gene56339:CDS | 60.0% | |
| TCGAGCTCGTGGTCGGTTGA+AGG | + | chr3.1:6574240-6574259 | None:intergenic | 60.0% | |
| TGGTGCGCAACAGAGTGTGC+AGG | - | chr3.1:6576427-6576446 | MS.gene56339:CDS | 60.0% | |
| GTCCGATCCCCGCGACTTCA+AGG | + | chr3.1:6576944-6576963 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 6573831 | 6577559 | 6573831 | ID=MS.gene56339 |
| chr3.1 | mRNA | 6573831 | 6577559 | 6573831 | ID=MS.gene56339.t1;Parent=MS.gene56339 |
| chr3.1 | exon | 6575388 | 6577559 | 6575388 | ID=MS.gene56339.t1.exon1;Parent=MS.gene56339.t1 |
| chr3.1 | CDS | 6575388 | 6577559 | 6575388 | ID=cds.MS.gene56339.t1;Parent=MS.gene56339.t1 |
| chr3.1 | exon | 6575259 | 6575315 | 6575259 | ID=MS.gene56339.t1.exon2;Parent=MS.gene56339.t1 |
| chr3.1 | CDS | 6575259 | 6575315 | 6575259 | ID=cds.MS.gene56339.t1;Parent=MS.gene56339.t1 |
| chr3.1 | exon | 6574936 | 6575007 | 6574936 | ID=MS.gene56339.t1.exon3;Parent=MS.gene56339.t1 |
| chr3.1 | CDS | 6574936 | 6575007 | 6574936 | ID=cds.MS.gene56339.t1;Parent=MS.gene56339.t1 |
| chr3.1 | exon | 6574782 | 6574844 | 6574782 | ID=MS.gene56339.t1.exon4;Parent=MS.gene56339.t1 |
| chr3.1 | CDS | 6574782 | 6574844 | 6574782 | ID=cds.MS.gene56339.t1;Parent=MS.gene56339.t1 |
| chr3.1 | exon | 6574635 | 6574703 | 6574635 | ID=MS.gene56339.t1.exon5;Parent=MS.gene56339.t1 |
| chr3.1 | CDS | 6574635 | 6574703 | 6574635 | ID=cds.MS.gene56339.t1;Parent=MS.gene56339.t1 |
| chr3.1 | exon | 6574512 | 6574556 | 6574512 | ID=MS.gene56339.t1.exon6;Parent=MS.gene56339.t1 |
| chr3.1 | CDS | 6574512 | 6574556 | 6574512 | ID=cds.MS.gene56339.t1;Parent=MS.gene56339.t1 |
| chr3.1 | exon | 6573831 | 6573941 | 6573831 | ID=MS.gene56339.t1.exon7;Parent=MS.gene56339.t1 |
| chr3.1 | CDS | 6573831 | 6573941 | 6573831 | ID=cds.MS.gene56339.t1;Parent=MS.gene56339.t1 |
| Gene Sequence |
| Protein sequence |
