Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07516.t1 | XP_013468879.1 | 96.5 | 396 | 13 | 1 | 1 | 396 | 1 | 395 | 6.50E-225 | 789.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07516.t1 | Q9UKL6 | 24.9 | 177 | 118 | 5 | 133 | 303 | 46 | 213 | 7.0e-10 | 66.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07516.t1 | A0A072VMT6 | 96.5 | 396 | 13 | 1 | 1 | 396 | 1 | 395 | 4.7e-225 | 789.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050767 | MS.gene07516 | 0.800121 | 1.67E-48 | -1.69E-46 |
| MS.gene050770 | MS.gene07516 | 0.800391 | 1.47E-48 | -1.69E-46 |
| MS.gene052290 | MS.gene07516 | 0.803287 | 3.75E-49 | -1.69E-46 |
| MS.gene053073 | MS.gene07516 | 0.810993 | 8.74E-51 | -1.69E-46 |
| MS.gene054123 | MS.gene07516 | 0.802508 | 5.43E-49 | -1.69E-46 |
| MS.gene054376 | MS.gene07516 | 0.816401 | 5.64E-52 | -1.69E-46 |
| MS.gene055254 | MS.gene07516 | 0.823819 | 1.13E-53 | -1.69E-46 |
| MS.gene056609 | MS.gene07516 | 0.847995 | 8.12E-60 | -1.69E-46 |
| MS.gene060495 | MS.gene07516 | 0.809407 | 1.92E-50 | -1.69E-46 |
| MS.gene061051 | MS.gene07516 | -0.811785 | 5.88E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07516.t1 | MTR_1g078030 | 96.465 | 396 | 13 | 1 | 1 | 396 | 1 | 395 | 0.0 | 787 |
| MS.gene07516.t1 | MTR_3g092640 | 54.501 | 411 | 153 | 6 | 19 | 395 | 14 | 424 | 3.67e-161 | 459 |
| MS.gene07516.t1 | MTR_5g007030 | 42.518 | 421 | 202 | 7 | 9 | 391 | 17 | 435 | 7.38e-112 | 334 |
| MS.gene07516.t1 | MTR_5g007030 | 49.693 | 326 | 158 | 5 | 70 | 391 | 2 | 325 | 6.02e-108 | 320 |
| MS.gene07516.t1 | MTR_4g005140 | 30.450 | 289 | 182 | 7 | 92 | 369 | 71 | 351 | 7.19e-35 | 132 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07516.t1 | AT1G64720 | 61.658 | 386 | 129 | 5 | 13 | 396 | 17 | 385 | 5.17e-173 | 488 |
| MS.gene07516.t1 | AT5G54170 | 56.013 | 316 | 133 | 4 | 84 | 395 | 120 | 433 | 6.59e-123 | 363 |
| MS.gene07516.t1 | AT4G14500 | 45.411 | 414 | 185 | 8 | 15 | 391 | 23 | 432 | 2.20e-117 | 348 |
| MS.gene07516.t1 | AT3G23080 | 44.526 | 411 | 195 | 10 | 9 | 391 | 13 | 418 | 3.56e-108 | 324 |
| MS.gene07516.t1 | AT3G23080 | 45.663 | 392 | 180 | 10 | 28 | 391 | 1 | 387 | 1.96e-104 | 314 |
| MS.gene07516.t1 | AT3G23080 | 45.663 | 392 | 180 | 10 | 28 | 391 | 1 | 387 | 1.96e-104 | 314 |
| MS.gene07516.t1 | AT4G14500 | 40.964 | 249 | 109 | 6 | 21 | 231 | 29 | 277 | 1.31e-54 | 182 |
| MS.gene07516.t1 | AT3G13062 | 30.159 | 315 | 204 | 8 | 91 | 395 | 82 | 390 | 2.98e-39 | 145 |
| MS.gene07516.t1 | AT3G13062 | 30.159 | 315 | 204 | 8 | 91 | 395 | 82 | 390 | 5.03e-39 | 145 |
| MS.gene07516.t1 | AT3G13062 | 29.102 | 323 | 205 | 8 | 91 | 395 | 82 | 398 | 5.69e-37 | 139 |
| MS.gene07516.t1 | AT1G55960 | 31.270 | 307 | 190 | 9 | 78 | 369 | 68 | 368 | 1.17e-35 | 135 |
| MS.gene07516.t1 | AT1G55960 | 28.990 | 307 | 172 | 11 | 78 | 369 | 68 | 343 | 1.84e-23 | 101 |
Find 122 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATCATAGGTCGTCGAATT+TGG | 0.185811 | 1.2:+62615523 | MS.gene07516:CDS |
| AGTTGGTTAGGGATTTCTTT+TGG | 0.205035 | 1.2:+62615269 | MS.gene07516:CDS |
| GTGACCAAGGCGGTTGTATT+TGG | 0.231338 | 1.2:+62616923 | MS.gene07516:CDS |
| TTGAGCCTAATAACTATTCT+TGG | 0.254030 | 1.2:+62613705 | MS.gene07516:CDS |
| GTTCTTTCACTATGAAGATA+TGG | 0.258130 | 1.2:+62616586 | MS.gene07516:CDS |
| GAATTCCTTTGTTGTTGTTA+TGG | 0.286629 | 1.2:+62613586 | MS.gene07516:CDS |
| TAATATAGATCTACCCGTTT+AGG | 0.290502 | 1.2:-62616003 | None:intergenic |
| GTACTCCAAGAATAGTTATT+AGG | 0.298005 | 1.2:-62613710 | None:intergenic |
| TGTTGTTGTTATGGATATCT+TGG | 0.306159 | 1.2:+62613595 | MS.gene07516:CDS |
| ATTAGGCTCAATAGCCCATT+TGG | 0.314280 | 1.2:-62613693 | None:intergenic |
| CTTGCCTGCACCCTTGATCA+AGG | 0.320705 | 1.2:+62616896 | MS.gene07516:CDS |
| CGCTAAGCTTGGAGTTCGTC+AGG | 0.333843 | 1.2:+62616625 | MS.gene07516:CDS |
| GCTTCAAAACCAACCTGGTT+TGG | 0.345626 | 1.2:+62613775 | MS.gene07516:CDS |
| CATGTCACGTGCAGTTCTTC+TGG | 0.349830 | 1.2:+62613975 | MS.gene07516:intron |
| ATGCGAGTCCTGAGTTGGTT+AGG | 0.358805 | 1.2:+62615257 | MS.gene07516:CDS |
| TTCAGTCTCCAACAGGTTAC+CGG | 0.359683 | 1.2:-62616798 | None:intergenic |
| CTTTGGATTGCTGTTATCTT+CGG | 0.360253 | 1.2:+62613644 | MS.gene07516:CDS |
| TATCATAGGTCGTCGAATTT+GGG | 0.370573 | 1.2:+62615524 | MS.gene07516:CDS |
| TTCTTTCACTATGAAGATAT+GGG | 0.383405 | 1.2:+62616587 | MS.gene07516:CDS |
| CCTGTTGGAGACTGAAAATC+AGG | 0.397121 | 1.2:+62616805 | MS.gene07516:CDS |
| GCCCGACGGTTTGGAAAATT+CGG | 0.400471 | 1.2:+62616950 | MS.gene07516:CDS |
| TTTGGAATAGCCCGACGGTT+TGG | 0.406644 | 1.2:+62616941 | MS.gene07516:CDS |
| GTGTTGTTGTTGGTTGGGCT+TGG | 0.406854 | 1.2:+62613666 | MS.gene07516:CDS |
| GTTGTTGTTATGGATATCTT+GGG | 0.415623 | 1.2:+62613596 | MS.gene07516:CDS |
| TATAAGAAAGAAAGGGATTC+CGG | 0.417822 | 1.2:+62616692 | MS.gene07516:CDS |
| CGTTTAGGTTTGCTCTGCCT+TGG | 0.417964 | 1.2:-62615988 | None:intergenic |
| CTTCGGTGTTGTTGTTGGTT+GGG | 0.423403 | 1.2:+62613661 | MS.gene07516:CDS |
| TTCTCTATCACTGCAAAAGA+AGG | 0.424377 | 1.2:-62615499 | None:intergenic |
| AGGTTTGCTCTGCCTTGGTA+TGG | 0.426290 | 1.2:-62615983 | None:intergenic |
| CAAGGCAGAGCAAACCTAAA+CGG | 0.429915 | 1.2:+62615989 | MS.gene07516:CDS |
| TCTTCGGTGTTGTTGTTGGT+TGG | 0.430475 | 1.2:+62613660 | MS.gene07516:CDS |
| ATACCTAAGCTTCTAGTTGT+TGG | 0.433725 | 1.2:+62616860 | MS.gene07516:CDS |
| TTTGCAAAATTTGTGTAAGT+TGG | 0.443993 | 1.2:+62614043 | MS.gene07516:CDS |
| CAAGCTTGGTAAGTCATGTT+TGG | 0.447227 | 1.2:-62614119 | None:intergenic |
| GTTGGGCTTGGAAACCCAAA+TGG | 0.449819 | 1.2:+62613678 | MS.gene07516:CDS |
| TTAGGCTCAATAGCCCATTT+GGG | 0.450902 | 1.2:-62613692 | None:intergenic |
| TGGTCACTAGCCCTTGATCA+AGG | 0.452319 | 1.2:-62616907 | None:intergenic |
| TTGGAGTTCGTCAGGGTATG+TGG | 0.453950 | 1.2:+62616633 | MS.gene07516:CDS |
| GTTATCTTCGGTGTTGTTGT+TGG | 0.454908 | 1.2:+62613656 | MS.gene07516:CDS |
| TCTTCAAGTTTCGAATTCCT+TGG | 0.455904 | 1.2:+62613738 | MS.gene07516:CDS |
| CAAAATTTGTGTAAGTTGGT+TGG | 0.456209 | 1.2:+62614047 | MS.gene07516:CDS |
| TACGTACGTATAAGAAAGAA+AGG | 0.462465 | 1.2:+62616684 | MS.gene07516:CDS |
| AAGGCAGAGCAAACCTAAAC+GGG | 0.465305 | 1.2:+62615990 | MS.gene07516:CDS |
| TTCTGGTGGTGAAAGTGAAA+AGG | 0.469810 | 1.2:+62613992 | MS.gene07516:CDS |
| TGCGAGTCCTGAGTTGGTTA+GGG | 0.472434 | 1.2:+62615258 | MS.gene07516:CDS |
| CTTGATCAAGGGTGCAGGCA+AGG | 0.479777 | 1.2:-62616895 | None:intergenic |
| TCTGGTGGTGAAAGTGAAAA+GGG | 0.485541 | 1.2:+62613993 | MS.gene07516:CDS |
| TTCTTATACGTACGTAGTCC+AGG | 0.487357 | 1.2:-62616677 | None:intergenic |
| ATGAAGATATGGGCATACCT+TGG | 0.492383 | 1.2:+62616597 | MS.gene07516:CDS |
| CCGCCAACAACTAGAAGCTT+AGG | 0.492437 | 1.2:-62616863 | None:intergenic |
| CCAGTTAAATCAAGAAAAGA+TGG | 0.498146 | 1.2:+62616539 | MS.gene07516:intron |
| TGAAGATATGGGCATACCTT+GGG | 0.500114 | 1.2:+62616598 | MS.gene07516:CDS |
| TCCAGGATCAAACTTCTTGA+CGG | 0.500862 | 1.2:-62616660 | None:intergenic |
| GCCGTCAAGAAGTTTGATCC+TGG | 0.503459 | 1.2:+62616659 | MS.gene07516:CDS |
| AACTTACTACTGTGTGACTA+AGG | 0.511110 | 1.2:+62615557 | MS.gene07516:CDS |
| TTACGTTCATAGCTCCACTT+TGG | 0.512161 | 1.2:+62613627 | MS.gene07516:CDS |
| CTTCTGATGACAAACCGATC+GGG | 0.515089 | 1.2:+62616831 | MS.gene07516:CDS |
| ACCAGCTTGGATTCAGATGA+TGG | 0.516098 | 1.2:+62614085 | MS.gene07516:CDS |
| TTTGCTCTGCCTTGGTATGG+AGG | 0.518246 | 1.2:-62615980 | None:intergenic |
| TTGCCTGCACCCTTGATCAA+GGG | 0.518780 | 1.2:+62616897 | MS.gene07516:CDS |
| CCTTGGGAAATCGCTAAGCT+TGG | 0.519071 | 1.2:+62616614 | MS.gene07516:CDS |
| CCTAAGCTTCTAGTTGTTGG+CGG | 0.520168 | 1.2:+62616863 | MS.gene07516:CDS |
| TGGAGTTCGTCAGGGTATGT+GGG | 0.522164 | 1.2:+62616634 | MS.gene07516:CDS |
| ATTCAAGAGTGTGAGGTCAC+TGG | 0.523985 | 1.2:+62615343 | MS.gene07516:CDS |
| TTGATCAAGGGTGCAGGCAA+GGG | 0.525896 | 1.2:-62616894 | None:intergenic |
| CTTGGTCCCTACGCCAAGCT+TGG | 0.528324 | 1.2:-62614133 | None:intergenic |
| TTAGGTATGCTTCTCCCGAT+CGG | 0.542706 | 1.2:-62616845 | None:intergenic |
| CAAACATGACTTACCAAGCT+TGG | 0.544826 | 1.2:+62614120 | MS.gene07516:CDS |
| GGTCACTAGCCCTTGATCAA+GGG | 0.548340 | 1.2:-62616906 | None:intergenic |
| AGTGATAGAGAATATATCAT+AGG | 0.553664 | 1.2:+62615510 | MS.gene07516:CDS |
| GGGATGATGAGTTTCGGTCG+AGG | 0.555696 | 1.2:+62615290 | MS.gene07516:CDS |
| TAGCCCTTGATCAAGGGTGC+AGG | 0.555894 | 1.2:-62616900 | None:intergenic |
| TTGGGCTTGGAAACCCAAAT+GGG | 0.556004 | 1.2:+62613679 | MS.gene07516:CDS |
| GTTTGGAATACTCCGCAACC+AGG | 0.561804 | 1.2:+62613792 | MS.gene07516:CDS |
| AAGGGTGCAGGCAAGGGCAA+TGG | 0.563247 | 1.2:-62616888 | None:intergenic |
| GTGAAAGTGAAAAGGGATTG+AGG | 0.563385 | 1.2:+62614000 | MS.gene07516:CDS |
| TGATGAGTTTCGGTCGAGGT+GGG | 0.565414 | 1.2:+62615294 | MS.gene07516:CDS |
| GACTTACCAAGCTTGGCGTA+GGG | 0.568038 | 1.2:+62614127 | MS.gene07516:CDS |
| GACGGTTTGGAAAATTCGGA+AGG | 0.568472 | 1.2:+62616954 | MS.gene07516:CDS |
| AAGAAATCCCTAACCAACTC+AGG | 0.569522 | 1.2:-62615265 | None:intergenic |
| ACACTTCACATGAAGTCAGC+TGG | 0.570067 | 1.2:-62616562 | None:intergenic |
| TGACTTACCAAGCTTGGCGT+AGG | 0.571589 | 1.2:+62614126 | MS.gene07516:CDS |
| CGGAGTATTCCAAACCAGGT+TGG | 0.575515 | 1.2:-62613784 | None:intergenic |
| ATGATGAGTTTCGGTCGAGG+TGG | 0.576909 | 1.2:+62615293 | MS.gene07516:CDS |
| TCCATCATCTGAATCCAAGC+TGG | 0.578196 | 1.2:-62614086 | None:intergenic |
| TATTCCAAATACAACCGCCT+TGG | 0.579315 | 1.2:-62616927 | None:intergenic |
| TCTCTATCACTGCAAAAGAA+GGG | 0.579682 | 1.2:-62615498 | None:intergenic |
| AGACTCGACCGGTAACCTGT+TGG | 0.583874 | 1.2:+62616790 | MS.gene07516:CDS |
| TCTTCTGATGACAAACCGAT+CGG | 0.596047 | 1.2:+62616830 | MS.gene07516:CDS |
| GGTTTGGAAAATTCGGAAGG+AGG | 0.596932 | 1.2:+62616957 | MS.gene07516:CDS |
| GTTGCGGAGTATTCCAAACC+AGG | 0.600622 | 1.2:-62613788 | None:intergenic |
| AAGATAACAGCAATCCAAAG+TGG | 0.602074 | 1.2:-62613641 | None:intergenic |
| TGAAGATGCGAGTCCTGAGT+TGG | 0.613594 | 1.2:+62615252 | MS.gene07516:CDS |
| TCAGAGCTTCAAAACCAACC+TGG | 0.614875 | 1.2:+62613770 | MS.gene07516:CDS |
| CCAAGCTTAGCGATTTCCCA+AGG | 0.615945 | 1.2:-62616614 | None:intergenic |
| GATGGTGCAGTGGGTGCGCA+AGG | 0.620411 | 1.2:+62615372 | MS.gene07516:CDS |
| TAAACTGTCAATTACCTGCA+CGG | 0.621201 | 1.2:-62616041 | None:intergenic |
| ACGTACGTATAAGAAAGAAA+GGG | 0.623052 | 1.2:+62616685 | MS.gene07516:CDS |
| CTGGAACAATGATGGTGCAG+TGG | 0.625357 | 1.2:+62615362 | MS.gene07516:CDS |
| GATATCCATAACAACAACAA+AGG | 0.628535 | 1.2:-62613591 | None:intergenic |
| TGAGGTCACTGGAACAATGA+TGG | 0.628803 | 1.2:+62615354 | MS.gene07516:CDS |
| AGATCTGTGGAAGACTCGAC+CGG | 0.630222 | 1.2:+62616779 | MS.gene07516:CDS |
| TTATTAGCACATGCTGACAA+TGG | 0.637025 | 1.2:-62616719 | None:intergenic |
| TGATCAAGGGCTAGTGACCA+AGG | 0.638516 | 1.2:+62616910 | MS.gene07516:CDS |
| GGGATTGAGGAGTATAGTGA+CGG | 0.640769 | 1.2:+62614013 | MS.gene07516:CDS |
| GTCACGTGCAGTTCTTCTGG+TGG | 0.640922 | 1.2:+62613978 | MS.gene07516:intron |
| ACCGTTCTACTGCGATACTG+TGG | 0.641157 | 1.2:-62615226 | None:intergenic |
| TTCAACTATTCAAGAGTGTG+AGG | 0.641287 | 1.2:+62615336 | MS.gene07516:CDS |
| ACCACAGTATCGCAGTAGAA+CGG | 0.641569 | 1.2:+62615225 | MS.gene07516:CDS |
| TGGAACAATGATGGTGCAGT+GGG | 0.643324 | 1.2:+62615363 | MS.gene07516:CDS |
| GTTCTACTGCGATACTGTGG+TGG | 0.646637 | 1.2:-62615223 | None:intergenic |
| GGAGTTCGTCAGGGTATGTG+GGG | 0.647398 | 1.2:+62616635 | MS.gene07516:CDS |
| AGCTTGGCGTAGGGACCAAG+AGG | 0.653449 | 1.2:+62614136 | MS.gene07516:CDS |
| GTGGAGCTATGAACGTAACA+AGG | 0.654092 | 1.2:-62613622 | None:intergenic |
| AGCTCTGAATCATTAAACCA+AGG | 0.662274 | 1.2:-62613755 | None:intergenic |
| ACATGCTGACAATGGAACGC+CGG | 0.666475 | 1.2:-62616711 | None:intergenic |
| TACCTTGTTCCTCCATACCA+AGG | 0.669373 | 1.2:+62615971 | MS.gene07516:CDS |
| GCTAAGCTTGGAGTTCGTCA+GGG | 0.670012 | 1.2:+62616626 | MS.gene07516:CDS |
| TGCTGATTACGTGAGATCTG+TGG | 0.675039 | 1.2:+62616766 | MS.gene07516:CDS |
| TTGTATTTGGAATAGCCCGA+CGG | 0.676217 | 1.2:+62616936 | MS.gene07516:CDS |
| TGCCTTGGTATGGAGGAACA+AGG | 0.712864 | 1.2:-62615973 | None:intergenic |
| TCAAGGGCTAGTGACCAAGG+CGG | 0.799326 | 1.2:+62616913 | MS.gene07516:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAATTATAGTC+TGG | + | chr1.2:62614366-62614385 | MS.gene07516:intron | 10.0% |
| !! | TAATAGCTAATATATTAAAT+AGG | - | chr1.2:62615860-62615879 | None:intergenic | 10.0% |
| !! | TTGTAAAATAGAATTTAAAT+AGG | - | chr1.2:62614703-62614722 | None:intergenic | 10.0% |
| !! | TTTATTACTATTACTATTAT+TGG | - | chr1.2:62614818-62614837 | None:intergenic | 10.0% |
| !! | AATAATAATTCAATGAAATC+AGG | - | chr1.2:62614173-62614192 | None:intergenic | 15.0% |
| !! | ATAATTTAAGCAACTAAAAT+TGG | - | chr1.2:62614248-62614267 | None:intergenic | 15.0% |
| !! | CTTATTAATTTAAGTAATTG+CGG | + | chr1.2:62616471-62616490 | MS.gene07516:intron | 15.0% |
| !! | GTTTAAATTATTGAAAATGT+TGG | + | chr1.2:62614756-62614775 | MS.gene07516:intron | 15.0% |
| !!! | CACTATTTAAATATTGATTT+AGG | + | chr1.2:62614726-62614745 | MS.gene07516:intron | 15.0% |
| !!! | CATTTTACATTTATTTTAGT+AGG | + | chr1.2:62614843-62614862 | MS.gene07516:intron | 15.0% |
| !! | AATTTAGTTGCTAAAATTGT+AGG | - | chr1.2:62615147-62615166 | None:intergenic | 20.0% |
| !! | ATTTAGTTGCTAAAATTGTA+GGG | - | chr1.2:62615146-62615165 | None:intergenic | 20.0% |
| !! | TAAGAATTTAATGATTCCTT+TGG | - | chr1.2:62616455-62616474 | None:intergenic | 20.0% |
| !! | TTTCATCAACATTGTTATAA+TGG | + | chr1.2:62615715-62615734 | MS.gene07516:intron | 20.0% |
| !!! | CAATTCATTTTTCTTAATCT+TGG | + | chr1.2:62616193-62616212 | MS.gene07516:intron | 20.0% |
| !!! | CATTTTTTTTCTTTTCTACA+TGG | + | chr1.2:62616425-62616444 | MS.gene07516:intron | 20.0% |
| ! | AACATTGTACATATACACAT+TGG | - | chr1.2:62616163-62616182 | None:intergenic | 25.0% |
| ! | AATGATATTAAAAACGAACC+TGG | - | chr1.2:62613813-62613832 | None:intergenic | 25.0% |
| ! | ACTCTATAAAGTCAAAAGAA+TGG | - | chr1.2:62615635-62615654 | None:intergenic | 25.0% |
| ! | ACTGATATAGATCAAAATAG+GGG | - | chr1.2:62615014-62615033 | None:intergenic | 25.0% |
| ! | AGCGTATTAAACTAACTTAT+CGG | + | chr1.2:62615817-62615836 | MS.gene07516:intron | 25.0% |
| ! | AGTGATAGAGAATATATCAT+AGG | + | chr1.2:62615510-62615529 | MS.gene07516:CDS | 25.0% |
| ! | ATGTGGTTATTGTTTCATAT+GGG | + | chr1.2:62613895-62613914 | MS.gene07516:intron | 25.0% |
| ! | CAATATTATGGAGAAAATTG+AGG | - | chr1.2:62616331-62616350 | None:intergenic | 25.0% |
| ! | CTCTATAAAGTCAAAAGAAT+GGG | - | chr1.2:62615634-62615653 | None:intergenic | 25.0% |
| ! | GACTGATATAGATCAAAATA+GGG | - | chr1.2:62615015-62615034 | None:intergenic | 25.0% |
| ! | GTTTCATATGAATGATAGAA+CGG | + | chr1.2:62616375-62616394 | MS.gene07516:intron | 25.0% |
| ! | TATTTATCCTAAGTTGTTCT+CGG | - | chr1.2:62614340-62614359 | None:intergenic | 25.0% |
| ! | TGTGTACATATTGAAACTAT+CGG | + | chr1.2:62616116-62616135 | MS.gene07516:intron | 25.0% |
| ! | TTCTCCATAATATTGTTAAC+TGG | + | chr1.2:62616336-62616355 | MS.gene07516:intron | 25.0% |
| ! | TTCTTTCACTATGAAGATAT+GGG | + | chr1.2:62616587-62616606 | MS.gene07516:CDS | 25.0% |
| ! | TTTCATATGAATGATAGAAC+GGG | + | chr1.2:62616376-62616395 | MS.gene07516:intron | 25.0% |
| ! | TTTGCAAAATTTGTGTAAGT+TGG | + | chr1.2:62614043-62614062 | MS.gene07516:CDS | 25.0% |
| !! | AATTTTACGGATCAATTGAT+TGG | - | chr1.2:62615046-62615065 | None:intergenic | 25.0% |
| !! | AATTTTCTCAATCTTTTGAG+AGG | + | chr1.2:62615892-62615911 | MS.gene07516:intron | 25.0% |
| !! | TTTTTCTTAATCTTGGTCAT+TGG | + | chr1.2:62616200-62616219 | MS.gene07516:intron | 25.0% |
| !!! | ATTGGATTAGATTTTGTATG+TGG | - | chr1.2:62614800-62614819 | None:intergenic | 25.0% |
| !!! | GTTACTTTTGTTTGTTAGAA+TGG | + | chr1.2:62615199-62615218 | MS.gene07516:intron | 25.0% |
| !!! | TAGCATAGTAGAATTTTGAT+AGG | + | chr1.2:62616256-62616275 | MS.gene07516:intron | 25.0% |
| !!! | TTACATTTATTTTAGTAGGC+CGG | + | chr1.2:62614847-62614866 | MS.gene07516:intron | 25.0% |
| !!! | TTATATTTCTAGTCAACTTG+TGG | + | chr1.2:62615926-62615945 | MS.gene07516:intron | 25.0% |
| AATCATTTGTACCAATTGCA+AGG | - | chr1.2:62616304-62616323 | None:intergenic | 30.0% | |
| AATTATAGTCTGGTATGACT+TGG | + | chr1.2:62614376-62614395 | MS.gene07516:intron | 30.0% | |
| ACGTACGTATAAGAAAGAAA+GGG | + | chr1.2:62616685-62616704 | MS.gene07516:CDS | 30.0% | |
| CATGTGGTTATTGTTTCATA+TGG | + | chr1.2:62613894-62613913 | MS.gene07516:intron | 30.0% | |
| CCAGTTAAATCAAGAAAAGA+TGG | + | chr1.2:62616539-62616558 | MS.gene07516:intron | 30.0% | |
| GATATCCATAACAACAACAA+AGG | - | chr1.2:62613594-62613613 | None:intergenic | 30.0% | |
| GATCAATTGATTGGTACAAA+AGG | - | chr1.2:62615037-62615056 | None:intergenic | 30.0% | |
| GATGCCAGTTAACAATATTA+TGG | - | chr1.2:62616343-62616362 | None:intergenic | 30.0% | |
| GGACTGATATAGATCAAAAT+AGG | - | chr1.2:62615016-62615035 | None:intergenic | 30.0% | |
| GTACTCCAAGAATAGTTATT+AGG | - | chr1.2:62613713-62613732 | None:intergenic | 30.0% | |
| GTTCTTTCACTATGAAGATA+TGG | + | chr1.2:62616586-62616605 | MS.gene07516:CDS | 30.0% | |
| TAATATAGATCTACCCGTTT+AGG | - | chr1.2:62616006-62616025 | None:intergenic | 30.0% | |
| TACGTACGTATAAGAAAGAA+AGG | + | chr1.2:62616684-62616703 | MS.gene07516:CDS | 30.0% | |
| TATAAGAAAGAAAGGGATTC+CGG | + | chr1.2:62616692-62616711 | MS.gene07516:CDS | 30.0% | |
| TCTGATATCTAACATGTCTT+TGG | + | chr1.2:62614665-62614684 | MS.gene07516:intron | 30.0% | |
| TGTGGTTATTGTTTCATATG+GGG | + | chr1.2:62613896-62613915 | MS.gene07516:intron | 30.0% | |
| TTAATTATCCATGGACACTA+TGG | - | chr1.2:62615680-62615699 | None:intergenic | 30.0% | |
| TTGAGCCTAATAACTATTCT+TGG | + | chr1.2:62613705-62613724 | MS.gene07516:CDS | 30.0% | |
| TTGCAATTGGTACAAATGAT+TGG | + | chr1.2:62616303-62616322 | MS.gene07516:intron | 30.0% | |
| ! | CCATCTTTTCTTGATTTAAC+TGG | - | chr1.2:62616542-62616561 | None:intergenic | 30.0% |
| ! | CTTTTAATCAAATGCGTGTT+TGG | + | chr1.2:62613843-62613862 | MS.gene07516:intron | 30.0% |
| ! | GATCGAGAATGTTCAAATTT+TGG | + | chr1.2:62615085-62615104 | MS.gene07516:intron | 30.0% |
| ! | GTTGTTGTTATGGATATCTT+GGG | + | chr1.2:62613596-62613615 | MS.gene07516:CDS | 30.0% |
| ! | TGTTGTTGTTATGGATATCT+TGG | + | chr1.2:62613595-62613614 | MS.gene07516:CDS | 30.0% |
| !! | AATTCTACTATGCTAGCTTT+CGG | - | chr1.2:62616251-62616270 | None:intergenic | 30.0% |
| !! | CAAAATTTGTGTAAGTTGGT+TGG | + | chr1.2:62614047-62614066 | MS.gene07516:CDS | 30.0% |
| !! | GAATTCCTTTGTTGTTGTTA+TGG | + | chr1.2:62613586-62613605 | MS.gene07516:CDS | 30.0% |
| !!! | GTAGGCTTAAAAAGCTTTTT+TGG | + | chr1.2:62614874-62614893 | MS.gene07516:intron | 30.0% |
| AAAGCAATTGAACTATGACC+TGG | + | chr1.2:62614528-62614547 | MS.gene07516:intron | 35.0% | |
| AACTTACTACTGTGTGACTA+AGG | + | chr1.2:62615557-62615576 | MS.gene07516:CDS | 35.0% | |
| AAGATAACAGCAATCCAAAG+TGG | - | chr1.2:62613644-62613663 | None:intergenic | 35.0% | |
| ATATCATAGGTCGTCGAATT+TGG | + | chr1.2:62615523-62615542 | MS.gene07516:CDS | 35.0% | |
| ATCAAAATAGGGGTGAGAAT+AGG | - | chr1.2:62615004-62615023 | None:intergenic | 35.0% | |
| ATTAAAAACGAACCTGGTTG+CGG | - | chr1.2:62613807-62613826 | None:intergenic | 35.0% | |
| CAATTGACATGTCCATAGAA+GGG | - | chr1.2:62615595-62615614 | None:intergenic | 35.0% | |
| CCATGGATAATTAACCAACT+AGG | + | chr1.2:62615686-62615705 | MS.gene07516:intron | 35.0% | |
| CCTAGTTGGTTAATTATCCA+TGG | - | chr1.2:62615689-62615708 | None:intergenic | 35.0% | |
| CCTATTTAGCTAAACAGATC+AGG | - | chr1.2:62614910-62614929 | None:intergenic | 35.0% | |
| CCTGATCTGTTTAGCTAAAT+AGG | + | chr1.2:62614907-62614926 | MS.gene07516:intron | 35.0% | |
| GATCCGTAAAATTGTACAGT+AGG | + | chr1.2:62615053-62615072 | MS.gene07516:intron | 35.0% | |
| GGTTTACAACACAAAACACA+AGG | - | chr1.2:62615412-62615431 | None:intergenic | 35.0% | |
| TAAACTGTCAATTACCTGCA+CGG | - | chr1.2:62616044-62616063 | None:intergenic | 35.0% | |
| TATCATAGGTCGTCGAATTT+GGG | + | chr1.2:62615524-62615543 | MS.gene07516:CDS | 35.0% | |
| TCAAACTGAACCGTACTAAA+CGG | + | chr1.2:62614416-62614435 | MS.gene07516:intron | 35.0% | |
| TCACACTTATACCTTGCAAT+TGG | + | chr1.2:62616290-62616309 | MS.gene07516:intron | 35.0% | |
| TCTCTATCACTGCAAAAGAA+GGG | - | chr1.2:62615501-62615520 | None:intergenic | 35.0% | |
| TGATGAAAAAGCTACCTAGT+TGG | - | chr1.2:62615703-62615722 | None:intergenic | 35.0% | |
| TTACTTCGTAGTCATAGCTA+AGG | - | chr1.2:62615433-62615452 | None:intergenic | 35.0% | |
| TTAGATGATACTTGCGTGTT+CGG | + | chr1.2:62614194-62614213 | MS.gene07516:intron | 35.0% | |
| TTATTAGCACATGCTGACAA+TGG | - | chr1.2:62616722-62616741 | None:intergenic | 35.0% | |
| TTCTCTATCACTGCAAAAGA+AGG | - | chr1.2:62615502-62615521 | None:intergenic | 35.0% | |
| ! | AACTGGCATCTTAGTGATTT+TGG | + | chr1.2:62616353-62616372 | MS.gene07516:intron | 35.0% |
| ! | AAGTTGGTTGGAGAAAAAGA+TGG | + | chr1.2:62614059-62614078 | MS.gene07516:CDS | 35.0% |
| ! | AGTTGGTTAGGGATTTCTTT+TGG | + | chr1.2:62615269-62615288 | MS.gene07516:CDS | 35.0% |
| ! | ATACCTAAGCTTCTAGTTGT+TGG | + | chr1.2:62616860-62616879 | MS.gene07516:CDS | 35.0% |
| ! | CTTTGGATTGCTGTTATCTT+CGG | + | chr1.2:62613644-62613663 | MS.gene07516:CDS | 35.0% |
| ! | GTGCCTACTGTACAATTTTA+CGG | - | chr1.2:62615059-62615078 | None:intergenic | 35.0% |
| ! | GTTGGTTAGGGATTTCTTTT+GGG | + | chr1.2:62615270-62615289 | MS.gene07516:CDS | 35.0% |
| ! | TCTTCAAGTTTCGAATTCCT+TGG | + | chr1.2:62613738-62613757 | MS.gene07516:CDS | 35.0% |
| ! | TTCAACTATTCAAGAGTGTG+AGG | + | chr1.2:62615336-62615355 | MS.gene07516:CDS | 35.0% |
| ! | TTTTCTACATGGTATGCCAA+AGG | + | chr1.2:62616436-62616455 | MS.gene07516:intron | 35.0% |
| !! | AGCTCTGAATCATTAAACCA+AGG | - | chr1.2:62613758-62613777 | None:intergenic | 35.0% |
| !! | ATATGCTCTAAAGACGTGTT+AGG | - | chr1.2:62614612-62614631 | None:intergenic | 35.0% |
| !!! | GGCTTAAAAAGCTTTTTTGG+TGG | + | chr1.2:62614877-62614896 | MS.gene07516:intron | 35.0% |
| !!! | TCTTTTGGGATGATGAGTTT+CGG | + | chr1.2:62615284-62615303 | MS.gene07516:CDS | 35.0% |
| AAGAAATCCCTAACCAACTC+AGG | - | chr1.2:62615268-62615287 | None:intergenic | 40.0% | |
| AGAAACCTATGGCTTAGCTT+AGG | - | chr1.2:62614967-62614986 | None:intergenic | 40.0% | |
| AGATATTGCCATAGTGTCCA+TGG | + | chr1.2:62615669-62615688 | MS.gene07516:intron | 40.0% | |
| AGCCATAGGTTTCTGTCAAT+CGG | + | chr1.2:62614973-62614992 | MS.gene07516:intron | 40.0% | |
| ATGAAGATATGGGCATACCT+TGG | + | chr1.2:62616597-62616616 | MS.gene07516:CDS | 40.0% | |
| ATGTCCATAGAAGGGAAACT+GGG | - | chr1.2:62615587-62615606 | None:intergenic | 40.0% | |
| ATTAGGCTCAATAGCCCATT+TGG | - | chr1.2:62613696-62613715 | None:intergenic | 40.0% | |
| CAAACATGACTTACCAAGCT+TGG | + | chr1.2:62614120-62614139 | MS.gene07516:CDS | 40.0% | |
| CAAGCTTGGTAAGTCATGTT+TGG | - | chr1.2:62614122-62614141 | None:intergenic | 40.0% | |
| CAGGAGTAAGAAATACCTCT+TGG | - | chr1.2:62614154-62614173 | None:intergenic | 40.0% | |
| CCTACATTGGGTTATTTGAG+CGG | + | chr1.2:62614471-62614490 | MS.gene07516:intron | 40.0% | |
| CGTACTAAACGGTTCAAAAC+CGG | + | chr1.2:62614427-62614446 | MS.gene07516:intron | 40.0% | |
| CTTAACCTAAGCTAAGCCAT+AGG | + | chr1.2:62614959-62614978 | MS.gene07516:intron | 40.0% | |
| GAATGGGCAACTTAATCTCA+TGG | - | chr1.2:62615618-62615637 | None:intergenic | 40.0% | |
| GACGTGTTAGGTATCAGAAT+AGG | - | chr1.2:62614600-62614619 | None:intergenic | 40.0% | |
| GCAATTGACATGTCCATAGA+AGG | - | chr1.2:62615596-62615615 | None:intergenic | 40.0% | |
| GCTTAGCTTAGGTTAAGCTT+AGG | - | chr1.2:62614956-62614975 | None:intergenic | 40.0% | |
| GTCAGTCTAGTGATGAGAAT+TGG | + | chr1.2:62614309-62614328 | MS.gene07516:intron | 40.0% | |
| GTGAAAGTGAAAAGGGATTG+AGG | + | chr1.2:62614000-62614019 | MS.gene07516:CDS | 40.0% | |
| GTGTCTGTTCACAGTTAAAC+CGG | - | chr1.2:62614449-62614468 | None:intergenic | 40.0% | |
| TATTCCAAATACAACCGCCT+TGG | - | chr1.2:62616930-62616949 | None:intergenic | 40.0% | |
| TCCAGGATCAAACTTCTTGA+CGG | - | chr1.2:62616663-62616682 | None:intergenic | 40.0% | |
| TCTTCTGATGACAAACCGAT+CGG | + | chr1.2:62616830-62616849 | MS.gene07516:CDS | 40.0% | |
| TGAAGATATGGGCATACCTT+GGG | + | chr1.2:62616598-62616617 | MS.gene07516:CDS | 40.0% | |
| TGGCGTATTTCACTTCTTCA+GGG | + | chr1.2:62615946-62615965 | MS.gene07516:intron | 40.0% | |
| TTACGTTCATAGCTCCACTT+TGG | + | chr1.2:62613627-62613646 | MS.gene07516:CDS | 40.0% | |
| TTAGGCTCAATAGCCCATTT+GGG | - | chr1.2:62613695-62613714 | None:intergenic | 40.0% | |
| TTCTTATACGTACGTAGTCC+AGG | - | chr1.2:62616680-62616699 | None:intergenic | 40.0% | |
| TTGGTTGGAGAAAAAGATGG+TGG | + | chr1.2:62614062-62614081 | MS.gene07516:CDS | 40.0% | |
| ! | TCTGGTGGTGAAAGTGAAAA+GGG | + | chr1.2:62613993-62614012 | MS.gene07516:CDS | 40.0% |
| ! | TTCCGAATTTTCCAAACCGT+CGG | - | chr1.2:62616955-62616974 | None:intergenic | 40.0% |
| ! | TTCTGGTGGTGAAAGTGAAA+AGG | + | chr1.2:62613992-62614011 | MS.gene07516:CDS | 40.0% |
| ! | TTGTATTTGGAATAGCCCGA+CGG | + | chr1.2:62616936-62616955 | MS.gene07516:CDS | 40.0% |
| !! | GCTTTTTAAGCCTACTAGAC+CGG | - | chr1.2:62614869-62614888 | None:intergenic | 40.0% |
| !! | GTTATCTTCGGTGTTGTTGT+TGG | + | chr1.2:62613656-62613675 | MS.gene07516:CDS | 40.0% |
| !!! | CGGTTTTGAACCGTTTAGTA+CGG | - | chr1.2:62614429-62614448 | None:intergenic | 40.0% |
| AAGGCAGAGCAAACCTAAAC+GGG | + | chr1.2:62615990-62616009 | MS.gene07516:CDS | 45.0% | |
| ACACGCATCTGTTGCATATG+TGG | + | chr1.2:62616515-62616534 | MS.gene07516:intron | 45.0% | |
| ACACTTCACATGAAGTCAGC+TGG | - | chr1.2:62616565-62616584 | None:intergenic | 45.0% | |
| ACCACAGTATCGCAGTAGAA+CGG | + | chr1.2:62615225-62615244 | MS.gene07516:CDS | 45.0% | |
| ACCAGCTTGGATTCAGATGA+TGG | + | chr1.2:62614085-62614104 | MS.gene07516:CDS | 45.0% | |
| AGCTAAACAGATCAGGCTAC+TGG | - | chr1.2:62614903-62614922 | None:intergenic | 45.0% | |
| ATCCTAAGTTGTTCTCGGCT+TGG | - | chr1.2:62614335-62614354 | None:intergenic | 45.0% | |
| CAACACAACACTGACACATG+TGG | + | chr1.2:62613878-62613897 | MS.gene07516:intron | 45.0% | |
| CAAGGCAGAGCAAACCTAAA+CGG | + | chr1.2:62615989-62616008 | MS.gene07516:CDS | 45.0% | |
| CACATGTGTCAGTGTTGTGT+TGG | - | chr1.2:62613880-62613899 | None:intergenic | 45.0% | |
| CATGTCCATAGAAGGGAAAC+TGG | - | chr1.2:62615588-62615607 | None:intergenic | 45.0% | |
| CCGCTCAAATAACCCAATGT+AGG | - | chr1.2:62614474-62614493 | None:intergenic | 45.0% | |
| CCTGTTGGAGACTGAAAATC+AGG | + | chr1.2:62616805-62616824 | MS.gene07516:CDS | 45.0% | |
| CTTCTGATGACAAACCGATC+GGG | + | chr1.2:62616831-62616850 | MS.gene07516:CDS | 45.0% | |
| GAACAGACACTGCCTACATT+GGG | + | chr1.2:62614459-62614478 | MS.gene07516:intron | 45.0% | |
| GACCGATTGACAGAAACCTA+TGG | - | chr1.2:62614978-62614997 | None:intergenic | 45.0% | |
| GCTTCAAAACCAACCTGGTT+TGG | + | chr1.2:62613775-62613794 | MS.gene07516:CDS | 45.0% | |
| GGTTTGGAAAATTCGGAAGG+AGG | + | chr1.2:62616957-62616976 | MS.gene07516:CDS | 45.0% | |
| GTACTGCAAAGTATGCTGCA+TGG | + | chr1.2:62615767-62615786 | MS.gene07516:intron | 45.0% | |
| GTGGAGCTATGAACGTAACA+AGG | - | chr1.2:62613625-62613644 | None:intergenic | 45.0% | |
| GTGGCGTATTTCACTTCTTC+AGG | + | chr1.2:62615945-62615964 | MS.gene07516:intron | 45.0% | |
| TACCTTGTTCCTCCATACCA+AGG | + | chr1.2:62615971-62615990 | MS.gene07516:CDS | 45.0% | |
| TATGCCCAGTTTCCCTTCTA+TGG | + | chr1.2:62615580-62615599 | MS.gene07516:intron | 45.0% | |
| TCAGAGCTTCAAAACCAACC+TGG | + | chr1.2:62613770-62613789 | MS.gene07516:CDS | 45.0% | |
| TCCATCATCTGAATCCAAGC+TGG | - | chr1.2:62614089-62614108 | None:intergenic | 45.0% | |
| TGAACAGACACTGCCTACAT+TGG | + | chr1.2:62614458-62614477 | MS.gene07516:intron | 45.0% | |
| TGAGGTCACTGGAACAATGA+TGG | + | chr1.2:62615354-62615373 | MS.gene07516:CDS | 45.0% | |
| TGCGTGTTCGGTTATCTAGT+TGG | + | chr1.2:62614206-62614225 | MS.gene07516:intron | 45.0% | |
| TTAGGTATGCTTCTCCCGAT+CGG | - | chr1.2:62616848-62616867 | None:intergenic | 45.0% | |
| TTATTTGAGCGGTTCAACCG+TGG | + | chr1.2:62614482-62614501 | MS.gene07516:intron | 45.0% | |
| TTCAGTCTCCAACAGGTTAC+CGG | - | chr1.2:62616801-62616820 | None:intergenic | 45.0% | |
| TTGGGCTTGGAAACCCAAAT+GGG | + | chr1.2:62613679-62613698 | MS.gene07516:CDS | 45.0% | |
| TTGTTTCATATGGGGCAGTG+TGG | + | chr1.2:62613904-62613923 | MS.gene07516:intron | 45.0% | |
| ! | ATTCAAGAGTGTGAGGTCAC+TGG | + | chr1.2:62615343-62615362 | MS.gene07516:CDS | 45.0% |
| ! | CCTAAGCTTCTAGTTGTTGG+CGG | + | chr1.2:62616863-62616882 | MS.gene07516:CDS | 45.0% |
| ! | CCTGATTTTCAGTCTCCAAC+AGG | - | chr1.2:62616808-62616827 | None:intergenic | 45.0% |
| ! | GACGGTTTGGAAAATTCGGA+AGG | + | chr1.2:62616954-62616973 | MS.gene07516:CDS | 45.0% |
| ! | GGGATTGAGGAGTATAGTGA+CGG | + | chr1.2:62614013-62614032 | MS.gene07516:CDS | 45.0% |
| ! | TCAAGCTTTTGTATCCGTGC+AGG | + | chr1.2:62616027-62616046 | MS.gene07516:CDS | 45.0% |
| ! | TCCGAATTTTCCAAACCGTC+GGG | - | chr1.2:62616954-62616973 | None:intergenic | 45.0% |
| ! | TGCTGATTACGTGAGATCTG+TGG | + | chr1.2:62616766-62616785 | MS.gene07516:CDS | 45.0% |
| ! | TGGAACAATGATGGTGCAGT+GGG | + | chr1.2:62615363-62615382 | MS.gene07516:CDS | 45.0% |
| ! | TTTTAGTAGGCCGGTCTAGT+AGG | + | chr1.2:62614856-62614875 | MS.gene07516:intron | 45.0% |
| !! | AAAAAGATGGTGGACCAGCT+TGG | + | chr1.2:62614072-62614091 | MS.gene07516:CDS | 45.0% |
| !! | CTTCGGTGTTGTTGTTGGTT+GGG | + | chr1.2:62613661-62613680 | MS.gene07516:CDS | 45.0% |
| !! | TCTTCGGTGTTGTTGTTGGT+TGG | + | chr1.2:62613660-62613679 | MS.gene07516:CDS | 45.0% |
| !!! | ATTAAAAAACAATTTTATTA+TGG | + | chr1.2:62616223-62616242 | MS.gene07516:intron | 5.0% |
| ACATGCTGACAATGGAACGC+CGG | - | chr1.2:62616714-62616733 | None:intergenic | 50.0% | |
| ACCGTTCTACTGCGATACTG+TGG | - | chr1.2:62615229-62615248 | None:intergenic | 50.0% | |
| AGATCTGTGGAAGACTCGAC+CGG | + | chr1.2:62616779-62616798 | MS.gene07516:CDS | 50.0% | |
| ATCCAAACCCGAAACCAAGC+CGG | - | chr1.2:62614562-62614581 | None:intergenic | 50.0% | |
| ATGATGAGTTTCGGTCGAGG+TGG | + | chr1.2:62615293-62615312 | MS.gene07516:CDS | 50.0% | |
| CATGTCACGTGCAGTTCTTC+TGG | + | chr1.2:62613975-62613994 | MS.gene07516:intron | 50.0% | |
| CCAAGCTTAGCGATTTCCCA+AGG | - | chr1.2:62616617-62616636 | None:intergenic | 50.0% | |
| CCGCCAACAACTAGAAGCTT+AGG | - | chr1.2:62616866-62616885 | None:intergenic | 50.0% | |
| CCTTGGGAAATCGCTAAGCT+TGG | + | chr1.2:62616614-62616633 | MS.gene07516:CDS | 50.0% | |
| CTATGACCTGGAGTTCTCAC+CGG | + | chr1.2:62614540-62614559 | MS.gene07516:intron | 50.0% | |
| CTCGAACCTGGACAAAACCA+CGG | - | chr1.2:62614502-62614521 | None:intergenic | 50.0% | |
| GACTTACCAAGCTTGGCGTA+GGG | + | chr1.2:62614127-62614146 | MS.gene07516:CDS | 50.0% | |
| GCCGTCAAGAAGTTTGATCC+TGG | + | chr1.2:62616659-62616678 | MS.gene07516:CDS | 50.0% | |
| GCTAAGCTTGGAGTTCGTCA+GGG | + | chr1.2:62616626-62616645 | MS.gene07516:CDS | 50.0% | |
| GGTCACTAGCCCTTGATCAA+GGG | - | chr1.2:62616909-62616928 | None:intergenic | 50.0% | |
| GTGACCAAGGCGGTTGTATT+TGG | + | chr1.2:62616923-62616942 | MS.gene07516:CDS | 50.0% | |
| GTTCTACTGCGATACTGTGG+TGG | - | chr1.2:62615226-62615245 | None:intergenic | 50.0% | |
| GTTGGGCTTGGAAACCCAAA+TGG | + | chr1.2:62613678-62613697 | MS.gene07516:CDS | 50.0% | |
| TGAAGATGCGAGTCCTGAGT+TGG | + | chr1.2:62615252-62615271 | MS.gene07516:CDS | 50.0% | |
| TGACTTACCAAGCTTGGCGT+AGG | + | chr1.2:62614126-62614145 | MS.gene07516:CDS | 50.0% | |
| TGATGAGTTTCGGTCGAGGT+GGG | + | chr1.2:62615294-62615313 | MS.gene07516:CDS | 50.0% | |
| TGCCTTGGTATGGAGGAACA+AGG | - | chr1.2:62615976-62615995 | None:intergenic | 50.0% | |
| TGGAGTTCGTCAGGGTATGT+GGG | + | chr1.2:62616634-62616653 | MS.gene07516:CDS | 50.0% | |
| TGGTCACTAGCCCTTGATCA+AGG | - | chr1.2:62616910-62616929 | None:intergenic | 50.0% | |
| TTGCCTGCACCCTTGATCAA+GGG | + | chr1.2:62616897-62616916 | MS.gene07516:CDS | 50.0% | |
| TTGGAGTTCGTCAGGGTATG+TGG | + | chr1.2:62616633-62616652 | MS.gene07516:CDS | 50.0% | |
| TTTGCTCTGCCTTGGTATGG+AGG | - | chr1.2:62615983-62616002 | None:intergenic | 50.0% | |
| ! | AGGTTTGCTCTGCCTTGGTA+TGG | - | chr1.2:62615986-62616005 | None:intergenic | 50.0% |
| ! | CGGAGTATTCCAAACCAGGT+TGG | - | chr1.2:62613787-62613806 | None:intergenic | 50.0% |
| ! | CGTTTAGGTTTGCTCTGCCT+TGG | - | chr1.2:62615991-62616010 | None:intergenic | 50.0% |
| ! | CTGGAACAATGATGGTGCAG+TGG | + | chr1.2:62615362-62615381 | MS.gene07516:CDS | 50.0% |
| ! | GCCCGACGGTTTGGAAAATT+CGG | + | chr1.2:62616950-62616969 | MS.gene07516:CDS | 50.0% |
| ! | GTGTTGTTGTTGGTTGGGCT+TGG | + | chr1.2:62613666-62613685 | MS.gene07516:CDS | 50.0% |
| ! | GTTGCGGAGTATTCCAAACC+AGG | - | chr1.2:62613791-62613810 | None:intergenic | 50.0% |
| ! | GTTTGGAATACTCCGCAACC+AGG | + | chr1.2:62613792-62613811 | MS.gene07516:CDS | 50.0% |
| ! | TAGGGTGCTCTCAACGAACT+TGG | - | chr1.2:62615128-62615147 | None:intergenic | 50.0% |
| ! | TGATCAAGGGCTAGTGACCA+AGG | + | chr1.2:62616910-62616929 | MS.gene07516:CDS | 50.0% |
| ! | TGCTTTAAACCGCTCGAACC+TGG | - | chr1.2:62614514-62614533 | None:intergenic | 50.0% |
| ! | TTGATCAAGGGTGCAGGCAA+GGG | - | chr1.2:62616897-62616916 | None:intergenic | 50.0% |
| ! | TTTGGAATAGCCCGACGGTT+TGG | + | chr1.2:62616941-62616960 | MS.gene07516:CDS | 50.0% |
| !! | AGTTCTCACCGGCTTGGTTT+CGG | + | chr1.2:62614551-62614570 | MS.gene07516:intron | 50.0% |
| !! | ATGCGAGTCCTGAGTTGGTT+AGG | + | chr1.2:62615257-62615276 | MS.gene07516:CDS | 50.0% |
| !! | TGCGAGTCCTGAGTTGGTTA+GGG | + | chr1.2:62615258-62615277 | MS.gene07516:CDS | 50.0% |
| !!! | GTTCAACCGTGGTTTTGTCC+AGG | + | chr1.2:62614493-62614512 | MS.gene07516:intron | 50.0% |
| !!! | TGGTTTTGTCCAGGTTCGAG+CGG | + | chr1.2:62614502-62614521 | MS.gene07516:intron | 50.0% |
| AGACTCGACCGGTAACCTGT+TGG | + | chr1.2:62616790-62616809 | MS.gene07516:CDS | 55.0% | |
| CGCTAAGCTTGGAGTTCGTC+AGG | + | chr1.2:62616625-62616644 | MS.gene07516:CDS | 55.0% | |
| CTTGCCTGCACCCTTGATCA+AGG | + | chr1.2:62616896-62616915 | MS.gene07516:CDS | 55.0% | |
| GGAGTTCGTCAGGGTATGTG+GGG | + | chr1.2:62616635-62616654 | MS.gene07516:CDS | 55.0% | |
| GGCCAAGCCGAGAACAACTT+AGG | + | chr1.2:62614330-62614349 | MS.gene07516:intron | 55.0% | |
| GGGATGATGAGTTTCGGTCG+AGG | + | chr1.2:62615290-62615309 | MS.gene07516:CDS | 55.0% | |
| GTCACGTGCAGTTCTTCTGG+TGG | + | chr1.2:62613978-62613997 | MS.gene07516:intron | 55.0% | |
| ! | CTTGATCAAGGGTGCAGGCA+AGG | - | chr1.2:62616898-62616917 | None:intergenic | 55.0% |
| ! | TAGCCCTTGATCAAGGGTGC+AGG | - | chr1.2:62616903-62616922 | None:intergenic | 55.0% |
| ! | TCAAGGGCTAGTGACCAAGG+CGG | + | chr1.2:62616913-62616932 | MS.gene07516:CDS | 55.0% |
| !! | GTTCTCACCGGCTTGGTTTC+GGG | + | chr1.2:62614552-62614571 | MS.gene07516:intron | 55.0% |
| ACCAAGCCGGTGAGAACTCC+AGG | - | chr1.2:62614549-62614568 | None:intergenic | 60.0% | |
| AGCTTGGCGTAGGGACCAAG+AGG | + | chr1.2:62614136-62614155 | MS.gene07516:CDS | 60.0% | |
| CTTGGTCCCTACGCCAAGCT+TGG | - | chr1.2:62614136-62614155 | None:intergenic | 60.0% | |
| ! | AAGGGTGCAGGCAAGGGCAA+TGG | - | chr1.2:62616891-62616910 | None:intergenic | 60.0% |
| ! | ACCTGGAGTTCTCACCGGCT+TGG | + | chr1.2:62614545-62614564 | MS.gene07516:intron | 60.0% |
| !! | CACCGGCTTGGTTTCGGGTT+TGG | + | chr1.2:62614557-62614576 | MS.gene07516:intron | 60.0% |
| GATGGTGCAGTGGGTGCGCA+AGG | + | chr1.2:62615372-62615391 | MS.gene07516:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 62613578 | 62616985 | 62613578 | ID=MS.gene07516 |
| chr1.2 | mRNA | 62613578 | 62616985 | 62613578 | ID=MS.gene07516.t1;Parent=MS.gene07516 |
| chr1.2 | exon | 62613578 | 62613813 | 62613578 | ID=MS.gene07516.t1.exon1;Parent=MS.gene07516.t1 |
| chr1.2 | CDS | 62613578 | 62613813 | 62613578 | ID=cds.MS.gene07516.t1;Parent=MS.gene07516.t1 |
| chr1.2 | exon | 62613989 | 62614157 | 62613989 | ID=MS.gene07516.t1.exon2;Parent=MS.gene07516.t1 |
| chr1.2 | CDS | 62613989 | 62614157 | 62613989 | ID=cds.MS.gene07516.t1;Parent=MS.gene07516.t1 |
| chr1.2 | exon | 62615217 | 62615393 | 62615217 | ID=MS.gene07516.t1.exon3;Parent=MS.gene07516.t1 |
| chr1.2 | CDS | 62615217 | 62615393 | 62615217 | ID=cds.MS.gene07516.t1;Parent=MS.gene07516.t1 |
| chr1.2 | exon | 62615495 | 62615578 | 62615495 | ID=MS.gene07516.t1.exon4;Parent=MS.gene07516.t1 |
| chr1.2 | CDS | 62615495 | 62615578 | 62615495 | ID=cds.MS.gene07516.t1;Parent=MS.gene07516.t1 |
| chr1.2 | exon | 62615967 | 62616048 | 62615967 | ID=MS.gene07516.t1.exon5;Parent=MS.gene07516.t1 |
| chr1.2 | CDS | 62615967 | 62616048 | 62615967 | ID=cds.MS.gene07516.t1;Parent=MS.gene07516.t1 |
| chr1.2 | exon | 62616543 | 62616985 | 62616543 | ID=MS.gene07516.t1.exon6;Parent=MS.gene07516.t1 |
| chr1.2 | CDS | 62616543 | 62616985 | 62616543 | ID=cds.MS.gene07516.t1;Parent=MS.gene07516.t1 |
| Gene Sequence |
| Protein sequence |
