Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08312.t1 | AFK39200.1 | 98.5 | 404 | 6 | 0 | 1 | 404 | 1 | 404 | 1.50E-224 | 788.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08312.t1 | O64688 | 83.8 | 408 | 60 | 2 | 1 | 404 | 1 | 406 | 1.8e-194 | 679.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08312.t1 | I3SG08 | 98.5 | 404 | 6 | 0 | 1 | 404 | 1 | 404 | 1.1e-224 | 788.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene80759 | MS.gene08312 | PPI |
| MS.gene073516 | MS.gene08312 | PPI |
| MS.gene037762 | MS.gene08312 | PPI |
| MS.gene81790 | MS.gene08312 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08312.t1 | MTR_3g076630 | 90.338 | 414 | 19 | 6 | 1 | 404 | 1 | 403 | 0.0 | 732 |
| MS.gene08312.t1 | MTR_7g005380 | 39.776 | 357 | 204 | 2 | 52 | 404 | 3 | 352 | 5.87e-89 | 273 |
| MS.gene08312.t1 | MTR_4g021470 | 37.785 | 307 | 188 | 3 | 75 | 379 | 29 | 334 | 4.85e-62 | 204 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08312.t1 | AT2G34590 | 83.824 | 408 | 60 | 2 | 1 | 404 | 1 | 406 | 0.0 | 711 |
| MS.gene08312.t1 | AT1G30120 | 82.238 | 411 | 61 | 5 | 1 | 404 | 1 | 406 | 0.0 | 692 |
| MS.gene08312.t1 | AT5G50850 | 40.979 | 327 | 189 | 1 | 81 | 403 | 33 | 359 | 7.13e-89 | 273 |
| MS.gene08312.t1 | AT1G55510 | 37.500 | 312 | 192 | 3 | 70 | 379 | 18 | 328 | 4.14e-62 | 204 |
| MS.gene08312.t1 | AT3G13450 | 37.419 | 310 | 191 | 3 | 72 | 379 | 26 | 334 | 1.68e-61 | 202 |
Find 121 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAAATTTCCATGACTATT+TGG | 0.148797 | 4.1:+16339480 | MS.gene08312:CDS |
| ATCAAGCCCTTCGCGTTATA+AGG | 0.270745 | 4.1:-16339100 | None:intergenic |
| TTCCACAATTGTTAGAGATT+TGG | 0.278564 | 4.1:-16338925 | None:intergenic |
| CCATTTGATCTTCACACAAT+TGG | 0.288971 | 4.1:+16339367 | MS.gene08312:CDS |
| GTTTGGCGACCTCAGAGTTT+TGG | 0.290215 | 4.1:+16338790 | MS.gene08312:CDS |
| TCTTCTCGTAGATCCCTTAA+AGG | 0.290798 | 4.1:+16336606 | MS.gene08312:CDS |
| GGTGAAGATGTAGGTCATTA+TGG | 0.293146 | 4.1:+16338731 | MS.gene08312:CDS |
| TCCTCCAATGTTCCGGCATA+TGG | 0.329825 | 4.1:-16339544 | None:intergenic |
| GACCTGATATCAATCACTTC+AGG | 0.344966 | 4.1:-16339337 | None:intergenic |
| CATCTGGGATTCTTTCCTTA+AGG | 0.345545 | 4.1:-16339183 | None:intergenic |
| CTTGTTGGAATCAAAGGAAT+TGG | 0.351212 | 4.1:-16336574 | None:intergenic |
| TAACTTACTGCAACTGCATT+AGG | 0.356093 | 4.1:-16336845 | None:intergenic |
| GACAGTACATACTCTTCATC+TGG | 0.377897 | 4.1:-16339199 | None:intergenic |
| CATTTGATCTTCACACAATT+GGG | 0.378344 | 4.1:+16339368 | MS.gene08312:CDS |
| TGCATGCGGACGGGTGGAAT+TGG | 0.378533 | 4.1:+16339433 | MS.gene08312:CDS |
| CCAATTGTGTGAAGATCAAA+TGG | 0.384655 | 4.1:-16339367 | None:intergenic |
| CTTCACGCAGGGCTTCAAAA+AGG | 0.384676 | 4.1:-16338664 | None:intergenic |
| GTGAAGGCATTCTCAGCAAT+AGG | 0.388309 | 4.1:-16338818 | None:intergenic |
| AGCAGAACACTCGCAGCGTC+TGG | 0.400977 | 4.1:+16339027 | MS.gene08312:CDS |
| ACCCTGAAGTGATTGATATC+AGG | 0.402772 | 4.1:+16339335 | MS.gene08312:CDS |
| GAACATGGGATTTCTACTTC+TGG | 0.411008 | 4.1:+16338895 | MS.gene08312:CDS |
| GCCTTCACTGGAATGGGTAT+TGG | 0.421709 | 4.1:+16338833 | MS.gene08312:CDS |
| TTACAATATTAACATATTCC+AGG | 0.423683 | 4.1:+16339260 | MS.gene08312:CDS |
| ATGTTCATGCCCTCGATGAT+TGG | 0.426525 | 4.1:-16338878 | None:intergenic |
| TGAAGGCATTCTCAGCAATA+GGG | 0.426997 | 4.1:-16338817 | None:intergenic |
| TGTCCATTCCTCCAATGTTC+CGG | 0.431474 | 4.1:-16339551 | None:intergenic |
| TATCATATGTTTATCCTCTC+AGG | 0.437493 | 4.1:+16339510 | MS.gene08312:CDS |
| TGAAGGATTGGAAGAAGAAA+TGG | 0.437869 | 4.1:+16338682 | MS.gene08312:CDS |
| TTGAAGAAGCTGAGATGGTT+AGG | 0.441077 | 4.1:+16339224 | MS.gene08312:CDS |
| CAGCTCCCAATCCTTGGAAA+AGG | 0.442930 | 4.1:-16336545 | None:intergenic |
| AGAAACCTAGCTGAAAAGTT+TGG | 0.444574 | 4.1:+16338773 | MS.gene08312:CDS |
| ATTCGTGGGCCCGGTGGAGT+TGG | 0.449345 | 4.1:+16338992 | MS.gene08312:CDS |
| ACTTCTGCAGCATCGAAACC+TGG | 0.450955 | 4.1:+16336983 | MS.gene08312:CDS |
| CAAGCGACCATCTGAATGCC+AGG | 0.452339 | 4.1:-16339070 | None:intergenic |
| TGAGAGGATAAACATATGAT+AGG | 0.455116 | 4.1:-16339508 | None:intergenic |
| GAGAATGCCTTCACTGGAAT+GGG | 0.472536 | 4.1:+16338827 | MS.gene08312:CDS |
| TGAAGCCCTGCGTGAAGGAT+TGG | 0.474938 | 4.1:+16338670 | MS.gene08312:CDS |
| AGCTCCCAATCCTTGGAAAA+GGG | 0.481402 | 4.1:-16336544 | None:intergenic |
| CCGGGCCCACGAATGACAAC+TGG | 0.484379 | 4.1:-16338983 | None:intergenic |
| ATTGCTGAGAATGCCTTCAC+TGG | 0.485666 | 4.1:+16338821 | MS.gene08312:CDS |
| CCCCTTGTTCACCAATGTCT+TGG | 0.487813 | 4.1:-16339308 | None:intergenic |
| AAAATACCAGTTGTCATTCG+TGG | 0.488255 | 4.1:+16338977 | MS.gene08312:CDS |
| GGTGGAGTTGGTCGGCAACT+TGG | 0.489359 | 4.1:+16339004 | MS.gene08312:CDS |
| GGTATTGGAGCTGCCATGAC+TGG | 0.492586 | 4.1:+16338848 | MS.gene08312:CDS |
| CCAGTTGTCATTCGTGGGCC+CGG | 0.493249 | 4.1:+16338983 | MS.gene08312:CDS |
| CCTTGGAAAAGGGTTGCCAT+TGG | 0.493532 | 4.1:-16336534 | None:intergenic |
| AAGTTGCCGACCAACTCCAC+CGG | 0.494059 | 4.1:-16339002 | None:intergenic |
| GGATCCTTGTGTTTGTGTCA+TGG | 0.495221 | 4.1:+16338709 | MS.gene08312:CDS |
| GATCCTTGTGTTTGTGTCAT+GGG | 0.499148 | 4.1:+16338710 | MS.gene08312:CDS |
| AGAAGAAAGGAGTAGCTTGT+TGG | 0.500236 | 4.1:-16336589 | None:intergenic |
| TGCCAAGACATTGGTGAACA+AGG | 0.503322 | 4.1:+16339306 | MS.gene08312:CDS |
| ACCTGATATCAATCACTTCA+GGG | 0.512110 | 4.1:-16339336 | None:intergenic |
| GACACATCGGGTTCTCATAG+TGG | 0.512571 | 4.1:+16339405 | MS.gene08312:CDS |
| AACCAAATCTCTAACAATTG+TGG | 0.513777 | 4.1:+16338923 | MS.gene08312:CDS |
| TTCTTCCAATCCTTCACGCA+GGG | 0.516415 | 4.1:-16338675 | None:intergenic |
| TGGAATTGGTGCTAGTTTGA+CGG | 0.517447 | 4.1:+16339447 | MS.gene08312:CDS |
| GAGTAGCTTGTTGGAATCAA+AGG | 0.518306 | 4.1:-16336580 | None:intergenic |
| TTCAATAAAGAAGACACATC+GGG | 0.518935 | 4.1:+16339393 | MS.gene08312:CDS |
| TGAGAATGCCTTCACTGGAA+TGG | 0.522043 | 4.1:+16338826 | MS.gene08312:CDS |
| GTTGGAATCAAAGGAATTGG+AGG | 0.522681 | 4.1:-16336571 | None:intergenic |
| GGAATGCTGCATTATACGTC+TGG | 0.522811 | 4.1:+16338944 | MS.gene08312:CDS |
| GACTCCATATGCCGGAACAT+TGG | 0.523095 | 4.1:+16339540 | MS.gene08312:CDS |
| GTGGAGGAGTGCATGCGGAC+GGG | 0.523691 | 4.1:+16339424 | MS.gene08312:CDS |
| AGGTAACAGCTCCCAATCCT+TGG | 0.528159 | 4.1:-16336551 | None:intergenic |
| AATCATCGAGGGCATGAACA+TGG | 0.528244 | 4.1:+16338880 | MS.gene08312:CDS |
| AAATACCAGTTGTCATTCGT+GGG | 0.533477 | 4.1:+16338978 | MS.gene08312:CDS |
| AAGCTGAGATGGTTAGGCCC+GGG | 0.538253 | 4.1:+16339230 | MS.gene08312:CDS |
| GAAGCTGAGATGGTTAGGCC+CGG | 0.544271 | 4.1:+16339229 | MS.gene08312:CDS |
| ACTGCAGTCACAATTTGAGC+AGG | 0.546350 | 4.1:-16339583 | None:intergenic |
| ATGCCGGAACATTGGAGGAA+TGG | 0.546987 | 4.1:+16339548 | MS.gene08312:CDS |
| ATTGGAAGAAGAAATGGAAA+GGG | 0.547209 | 4.1:+16338688 | MS.gene08312:CDS |
| GAGGAGTGCATGCGGACGGG+TGG | 0.547477 | 4.1:+16339427 | MS.gene08312:CDS |
| TCCAATACCCATTCCAGTGA+AGG | 0.555423 | 4.1:-16338834 | None:intergenic |
| TTCAACACCTTATAACGCGA+AGG | 0.557324 | 4.1:+16339093 | MS.gene08312:CDS |
| GTGGGCCCGGTGGAGTTGGT+CGG | 0.557377 | 4.1:+16338996 | MS.gene08312:CDS |
| TAAGGGATCTACGAGAAGAA+AGG | 0.559476 | 4.1:-16336602 | None:intergenic |
| GTCACTTGAAGAAGCTGAGA+TGG | 0.561009 | 4.1:+16339219 | MS.gene08312:CDS |
| TCCATATGCCGGAACATTGG+AGG | 0.562757 | 4.1:+16339543 | MS.gene08312:CDS |
| AGTTGCCGACCAACTCCACC+GGG | 0.566918 | 4.1:-16339001 | None:intergenic |
| ATCAATCCCTGGCATTCAGA+TGG | 0.568464 | 4.1:+16339063 | MS.gene08312:CDS |
| GATTGGCCTCAGACCAGTCA+TGG | 0.570730 | 4.1:-16338861 | None:intergenic |
| GATTGGAAGAAGAAATGGAA+AGG | 0.571903 | 4.1:+16338687 | MS.gene08312:CDS |
| CAGTCACAATTTGAGCAGGT+TGG | 0.573277 | 4.1:-16339579 | None:intergenic |
| AGTGGAGGAGTGCATGCGGA+CGG | 0.574301 | 4.1:+16339423 | MS.gene08312:CDS |
| TAATATTGTAACATGCTCCC+CGG | 0.574738 | 4.1:-16339248 | None:intergenic |
| CTTCTTCCAATCCTTCACGC+AGG | 0.574955 | 4.1:-16338676 | None:intergenic |
| CATGACATGATACCTCATCC+TGG | 0.575595 | 4.1:-16339278 | None:intergenic |
| GTGAGCAAGACTTTGAAGAC+TGG | 0.581663 | 4.1:+16336794 | MS.gene08312:CDS |
| TATTAACATATTCCAGGATG+AGG | 0.586788 | 4.1:+16339266 | MS.gene08312:CDS |
| AGCTGAGATGGTTAGGCCCG+GGG | 0.588499 | 4.1:+16339231 | MS.gene08312:CDS |
| TAGGAGCATCCAAATAGTCA+TGG | 0.589072 | 4.1:-16339489 | None:intergenic |
| AATATTGTAACATGCTCCCC+GGG | 0.594446 | 4.1:-16339247 | None:intergenic |
| TCAACACCTTATAACGCGAA+GGG | 0.602656 | 4.1:+16339094 | MS.gene08312:CDS |
| GCCAAGACATTGGTGAACAA+GGG | 0.602952 | 4.1:+16339307 | MS.gene08312:CDS |
| TGTGTCATGGGTGAAGATGT+AGG | 0.609135 | 4.1:+16338722 | MS.gene08312:CDS |
| ATCATCGAGGGCATGAACAT+GGG | 0.611161 | 4.1:+16338881 | MS.gene08312:CDS |
| CTTCTGCAGCATCGAAACCT+GGG | 0.613569 | 4.1:+16336984 | MS.gene08312:CDS |
| GAAGGCATTCTCAGCAATAG+GGG | 0.613755 | 4.1:-16338816 | None:intergenic |
| TGTTGTCAGATCTGATGCAA+AGG | 0.616245 | 4.1:+16336772 | MS.gene08312:CDS |
| AATGTTCCGGCATATGGAGT+CGG | 0.618120 | 4.1:-16339538 | None:intergenic |
| ATTCAATAAAGAAGACACAT+CGG | 0.620292 | 4.1:+16339392 | MS.gene08312:CDS |
| GATGTGCCGACTCCATATGC+CGG | 0.624357 | 4.1:+16339532 | MS.gene08312:CDS |
| GATTTGATTTCAGAGAGGAA+AGG | 0.624504 | 4.1:+16336740 | MS.gene08312:intron |
| TCATTATGGAGGATCTTACA+AGG | 0.628639 | 4.1:+16338745 | MS.gene08312:CDS |
| GTTGTCATTCGTGGGCCCGG+TGG | 0.632799 | 4.1:+16338986 | MS.gene08312:CDS |
| CCAAGACATTGGTGAACAAG+GGG | 0.632861 | 4.1:+16339308 | MS.gene08312:CDS |
| ACAGTACATACTCTTCATCT+GGG | 0.634502 | 4.1:-16339198 | None:intergenic |
| GGTCTGAGGCCAATCATCGA+GGG | 0.636424 | 4.1:+16338869 | MS.gene08312:CDS |
| TTTCGATGCTGCAGAAGTCG+CGG | 0.636745 | 4.1:-16336978 | None:intergenic |
| GAGCTGCCATGACTGGTCTG+AGG | 0.641109 | 4.1:+16338855 | MS.gene08312:CDS |
| CATGCAAGCTGCCAAGACAT+TGG | 0.643386 | 4.1:+16339297 | MS.gene08312:CDS |
| ATGCTGCATTATACGTCTGG+AGG | 0.653371 | 4.1:+16338947 | MS.gene08312:CDS |
| AAGCGACCATCTGAATGCCA+GGG | 0.661617 | 4.1:-16339069 | None:intergenic |
| TCATAGTGGAGGAGTGCATG+CGG | 0.664859 | 4.1:+16339419 | MS.gene08312:CDS |
| GAAGATGTAGGTCATTATGG+AGG | 0.665183 | 4.1:+16338734 | MS.gene08312:CDS |
| ACATCGGGTTCTCATAGTGG+AGG | 0.676270 | 4.1:+16339408 | MS.gene08312:CDS |
| TGGAGTCGGCACATCCTGAG+AGG | 0.680395 | 4.1:-16339524 | None:intergenic |
| TGGTCTGAGGCCAATCATCG+AGG | 0.681253 | 4.1:+16338868 | MS.gene08312:CDS |
| AACATTGGAGGAATGGACAG+TGG | 0.695713 | 4.1:+16339555 | MS.gene08312:CDS |
| TCACCCATGACACAAACACA+AGG | 0.709163 | 4.1:-16338713 | None:intergenic |
| TAGGGGTGTCCAAAACTCTG+AGG | 0.714225 | 4.1:-16338799 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAAATACATAAAGA+CGG | - | chr4.1:16337972-16337991 | None:intergenic | 10.0% |
| !! | TCAAAAAAATAAATATTAAC+TGG | + | chr4.1:16338093-16338112 | MS.gene08312:intron | 10.0% |
| !!! | AATTTTTTAATAATGTATCT+AGG | - | chr4.1:16337441-16337460 | None:intergenic | 10.0% |
| !!! | ATTAAATTTAAGATTAATAG+CGG | + | chr4.1:16337458-16337477 | MS.gene08312:intron | 10.0% |
| !! | TCAGAAAATAAAATAGAAAA+AGG | - | chr4.1:16338460-16338479 | None:intergenic | 15.0% |
| !! | TCTAACCAAAAAAAAATATA+GGG | - | chr4.1:16337921-16337940 | None:intergenic | 15.0% |
| !! | TTCTAACCAAAAAAAAATAT+AGG | - | chr4.1:16337922-16337941 | None:intergenic | 15.0% |
| !!! | TTTTGAAAAATTTCTTGTAT+CGG | - | chr4.1:16337401-16337420 | None:intergenic | 15.0% |
| !! | ATCTCATTTATCAATATCAA+AGG | - | chr4.1:16338328-16338347 | None:intergenic | 20.0% |
| !! | TCTCATTTATCAATATCAAA+GGG | - | chr4.1:16338327-16338346 | None:intergenic | 20.0% |
| !! | TTACAATATTAACATATTCC+AGG | + | chr4.1:16339260-16339279 | MS.gene08312:CDS | 20.0% |
| !!! | GTTTGAAAATTGTGTTTTTT+TGG | + | chr4.1:16336922-16336941 | MS.gene08312:intron | 20.0% |
| ! | AACAACATCAAATGTTTGTA+GGG | - | chr4.1:16337019-16337038 | None:intergenic | 25.0% |
| ! | ATTACATTTCAACTATGACT+TGG | - | chr4.1:16338361-16338380 | None:intergenic | 25.0% |
| ! | ATTCAATAAAGAAGACACAT+CGG | + | chr4.1:16339392-16339411 | MS.gene08312:CDS | 25.0% |
| ! | GGTTTCTCTTATAAGTTAAT+GGG | + | chr4.1:16336667-16336686 | MS.gene08312:intron | 25.0% |
| ! | GTTTCTCTTATAAGTTAATG+GGG | + | chr4.1:16336668-16336687 | MS.gene08312:intron | 25.0% |
| ! | TCAAAAAAACGAACCTTTAA+GGG | - | chr4.1:16336622-16336641 | None:intergenic | 25.0% |
| ! | TGAAAATTTCCATGACTATT+TGG | + | chr4.1:16339480-16339499 | MS.gene08312:CDS | 25.0% |
| !! | TGTTTTGCTTTATAACCTTA+AGG | + | chr4.1:16339168-16339187 | MS.gene08312:CDS | 25.0% |
| !! | TTCAATTTTACAAAGCAGAT+AGG | + | chr4.1:16337176-16337195 | MS.gene08312:intron | 25.0% |
| !! | TTTTATTCTTCTCTCTGATT+GGG | - | chr4.1:16337736-16337755 | None:intergenic | 25.0% |
| !!! | AGGAACCCTATATTTTTTTT+TGG | + | chr4.1:16337913-16337932 | MS.gene08312:intron | 25.0% |
| !!! | CTAATTTGTGCAGAAATTTT+TGG | - | chr4.1:16337569-16337588 | None:intergenic | 25.0% |
| !!! | TTGAATGGTTTTTTGATTCT+GGG | + | chr4.1:16336646-16336665 | MS.gene08312:intron | 25.0% |
| AACCAAATCTCTAACAATTG+TGG | + | chr4.1:16338923-16338942 | MS.gene08312:CDS | 30.0% | |
| AATGAAAGAAACAGCATCAA+TGG | - | chr4.1:16336712-16336731 | None:intergenic | 30.0% | |
| ACAACATCAAATGTTTGTAG+GGG | - | chr4.1:16337018-16337037 | None:intergenic | 30.0% | |
| AGTACTAATGATGTTCTCTT+TGG | - | chr4.1:16337619-16337638 | None:intergenic | 30.0% | |
| ATTGGAAGAAGAAATGGAAA+GGG | + | chr4.1:16338688-16338707 | MS.gene08312:CDS | 30.0% | |
| CACGCAATTACAAAAAAATG+TGG | - | chr4.1:16336892-16336911 | None:intergenic | 30.0% | |
| CATTTGATCTTCACACAATT+GGG | + | chr4.1:16339368-16339387 | MS.gene08312:CDS | 30.0% | |
| CTTCAATTAAGAATGACTTC+AGG | + | chr4.1:16337291-16337310 | MS.gene08312:intron | 30.0% | |
| GAAAAAGGAAAAAATGTGCA+CGG | - | chr4.1:16338445-16338464 | None:intergenic | 30.0% | |
| GAACAACATCAAATGTTTGT+AGG | - | chr4.1:16337020-16337039 | None:intergenic | 30.0% | |
| GATGTTGAGATTGAGTTAAT+CGG | + | chr4.1:16337846-16337865 | MS.gene08312:intron | 30.0% | |
| GGGTTTCTCTTATAAGTTAA+TGG | + | chr4.1:16336666-16336685 | MS.gene08312:intron | 30.0% | |
| GTCAAAAAAACGAACCTTTA+AGG | - | chr4.1:16336623-16336642 | None:intergenic | 30.0% | |
| TATCATATGTTTATCCTCTC+AGG | + | chr4.1:16339510-16339529 | MS.gene08312:CDS | 30.0% | |
| TATTAACATATTCCAGGATG+AGG | + | chr4.1:16339266-16339285 | MS.gene08312:CDS | 30.0% | |
| TCAAAACTCCCAATATGATA+CGG | + | chr4.1:16337415-16337434 | MS.gene08312:intron | 30.0% | |
| TGAGAGGATAAACATATGAT+AGG | - | chr4.1:16339511-16339530 | None:intergenic | 30.0% | |
| TTCAATAAAGAAGACACATC+GGG | + | chr4.1:16339393-16339412 | MS.gene08312:CDS | 30.0% | |
| TTCCACAATTGTTAGAGATT+TGG | - | chr4.1:16338928-16338947 | None:intergenic | 30.0% | |
| ! | ACACGATTCTTCACTATTTT+TGG | + | chr4.1:16338177-16338196 | MS.gene08312:intron | 30.0% |
| ! | CTTTTATTCTTCTCTCTGAT+TGG | - | chr4.1:16337737-16337756 | None:intergenic | 30.0% |
| ! | GTCATGGAAATTTTCAGTAA+TGG | - | chr4.1:16339476-16339495 | None:intergenic | 30.0% |
| ! | TCATATTTTCAATCAATCCC+TGG | + | chr4.1:16339052-16339071 | MS.gene08312:CDS | 30.0% |
| !! | TAACTGATTTGATTTCAGAG+AGG | + | chr4.1:16336735-16336754 | MS.gene08312:intron | 30.0% |
| !!! | CACATTTTTTTGTAATTGCG+TGG | + | chr4.1:16336890-16336909 | MS.gene08312:intron | 30.0% |
| !!! | CTTCACTATTTTTGGAGTAT+CGG | + | chr4.1:16338185-16338204 | MS.gene08312:intron | 30.0% |
| !!! | GTGTTTTTTTGGTTGTTGTT+TGG | + | chr4.1:16336933-16336952 | MS.gene08312:intron | 30.0% |
| !!! | GTTGAATGGTTTTTTGATTC+TGG | + | chr4.1:16336645-16336664 | MS.gene08312:intron | 30.0% |
| !!! | TTCACTATTTTTGGAGTATC+GGG | + | chr4.1:16338186-16338205 | MS.gene08312:intron | 30.0% |
| AAAATACCAGTTGTCATTCG+TGG | + | chr4.1:16338977-16338996 | MS.gene08312:CDS | 35.0% | |
| AAATACCAGTTGTCATTCGT+GGG | + | chr4.1:16338978-16338997 | MS.gene08312:CDS | 35.0% | |
| ACAGTACATACTCTTCATCT+GGG | - | chr4.1:16339201-16339220 | None:intergenic | 35.0% | |
| ACATGCTCAAAAAGAATCAC+AGG | - | chr4.1:16339151-16339170 | None:intergenic | 35.0% | |
| ACCTGATATCAATCACTTCA+GGG | - | chr4.1:16339339-16339358 | None:intergenic | 35.0% | |
| AGAAACCTAGCTGAAAAGTT+TGG | + | chr4.1:16338773-16338792 | MS.gene08312:CDS | 35.0% | |
| AGAAACTGAGTATAACTCAC+CGG | + | chr4.1:16337794-16337813 | MS.gene08312:intron | 35.0% | |
| ATCAGATATCAGATACGTGT+CGG | + | chr4.1:16338154-16338173 | MS.gene08312:intron | 35.0% | |
| ATTGAGTTAATCGGTGGTAA+TGG | + | chr4.1:16337855-16337874 | MS.gene08312:intron | 35.0% | |
| CATGCTCAAAAAGAATCACA+GGG | - | chr4.1:16339150-16339169 | None:intergenic | 35.0% | |
| CCAATTGTGTGAAGATCAAA+TGG | - | chr4.1:16339370-16339389 | None:intergenic | 35.0% | |
| CCATTTGATCTTCACACAAT+TGG | + | chr4.1:16339367-16339386 | MS.gene08312:CDS | 35.0% | |
| CTTGTTGGAATCAAAGGAAT+TGG | - | chr4.1:16336577-16336596 | None:intergenic | 35.0% | |
| GATTGGAAGAAGAAATGGAA+AGG | + | chr4.1:16338687-16338706 | MS.gene08312:CDS | 35.0% | |
| GGTAAAAATGTCTTCATGCT+GGG | - | chr4.1:16338306-16338325 | None:intergenic | 35.0% | |
| TAACTTACTGCAACTGCATT+AGG | - | chr4.1:16336848-16336867 | None:intergenic | 35.0% | |
| TAATATTGTAACATGCTCCC+CGG | - | chr4.1:16339251-16339270 | None:intergenic | 35.0% | |
| TAGGCCAAAACAGTGAAATA+TGG | + | chr4.1:16338231-16338250 | MS.gene08312:intron | 35.0% | |
| TATCTAGGCCGTATCATATT+GGG | - | chr4.1:16337426-16337445 | None:intergenic | 35.0% | |
| TCACAGCTGAAAAGAAGATT+AGG | + | chr4.1:16338212-16338231 | MS.gene08312:intron | 35.0% | |
| TCATTATGGAGGATCTTACA+AGG | + | chr4.1:16338745-16338764 | MS.gene08312:CDS | 35.0% | |
| TGAAGGATTGGAAGAAGAAA+TGG | + | chr4.1:16338682-16338701 | MS.gene08312:CDS | 35.0% | |
| ! | GATTTGATTTCAGAGAGGAA+AGG | + | chr4.1:16336740-16336759 | MS.gene08312:intron | 35.0% |
| ! | GTATGCTCTTTTGATCGTAA+AGG | - | chr4.1:16338553-16338572 | None:intergenic | 35.0% |
| ! | TAGGCCATATTTCACTGTTT+TGG | - | chr4.1:16338238-16338257 | None:intergenic | 35.0% |
| ! | TGTTGTTTGGTTATAGACAC+AGG | + | chr4.1:16336946-16336965 | MS.gene08312:intron | 35.0% |
| !! | CAGATGTGCATTTTATTTGC+AGG | + | chr4.1:16338630-16338649 | MS.gene08312:intron | 35.0% |
| !! | TAAGACAGAAGTATCGTTGT+CGG | + | chr4.1:16338027-16338046 | MS.gene08312:intron | 35.0% |
| !!! | CGTTTTTTTGACTCGTTGAA+TGG | + | chr4.1:16336631-16336650 | MS.gene08312:intron | 35.0% |
| !!! | TCACTATTTTTGGAGTATCG+GGG | + | chr4.1:16338187-16338206 | MS.gene08312:intron | 35.0% |
| AAATATGGCCTAAACTGTGG+AGG | + | chr4.1:16338246-16338265 | MS.gene08312:intron | 40.0% | |
| AATATGGCCTAAACTGTGGA+GGG | + | chr4.1:16338247-16338266 | MS.gene08312:intron | 40.0% | |
| AATATTGTAACATGCTCCCC+GGG | - | chr4.1:16339250-16339269 | None:intergenic | 40.0% | |
| ACCCTGAAGTGATTGATATC+AGG | + | chr4.1:16339335-16339354 | MS.gene08312:CDS | 40.0% | |
| ACTTCTCCGATACGTGTATT+CGG | + | chr4.1:16338121-16338140 | MS.gene08312:intron | 40.0% | |
| AGATAGGCTATGCTTCAATG+AGG | + | chr4.1:16337192-16337211 | MS.gene08312:intron | 40.0% | |
| ATACGTCCGAATACACGTAT+CGG | - | chr4.1:16338130-16338149 | None:intergenic | 40.0% | |
| ATACGTGTATTCGGACGTAT+CGG | + | chr4.1:16338130-16338149 | MS.gene08312:intron | 40.0% | |
| CAAGTCGATAGTTTCCATCT+AGG | + | chr4.1:16338484-16338503 | MS.gene08312:intron | 40.0% | |
| GAACATGGGATTTCTACTTC+TGG | + | chr4.1:16338895-16338914 | MS.gene08312:CDS | 40.0% | |
| GAAGATGTAGGTCATTATGG+AGG | + | chr4.1:16338734-16338753 | MS.gene08312:CDS | 40.0% | |
| GACAGTACATACTCTTCATC+TGG | - | chr4.1:16339202-16339221 | None:intergenic | 40.0% | |
| GACCTGATATCAATCACTTC+AGG | - | chr4.1:16339340-16339359 | None:intergenic | 40.0% | |
| GATCCTTGTGTTTGTGTCAT+GGG | + | chr4.1:16338710-16338729 | MS.gene08312:CDS | 40.0% | |
| GCTTCAATGAGGAGAAGAAT+TGG | + | chr4.1:16337203-16337222 | MS.gene08312:intron | 40.0% | |
| GGGTAAAAATGTCTTCATGC+TGG | - | chr4.1:16338307-16338326 | None:intergenic | 40.0% | |
| GGTGAAGATGTAGGTCATTA+TGG | + | chr4.1:16338731-16338750 | MS.gene08312:CDS | 40.0% | |
| GTATCTAGGCCGTATCATAT+TGG | - | chr4.1:16337427-16337446 | None:intergenic | 40.0% | |
| GTGAAATATGGCCTAAACTG+TGG | + | chr4.1:16338243-16338262 | MS.gene08312:intron | 40.0% | |
| GTTGAGATTGAGTTAATCGG+TGG | + | chr4.1:16337849-16337868 | MS.gene08312:intron | 40.0% | |
| GTTGGAATCAAAGGAATTGG+AGG | - | chr4.1:16336574-16336593 | None:intergenic | 40.0% | |
| TAAGGGATCTACGAGAAGAA+AGG | - | chr4.1:16336605-16336624 | None:intergenic | 40.0% | |
| TCAACACCTTATAACGCGAA+GGG | + | chr4.1:16339094-16339113 | MS.gene08312:CDS | 40.0% | |
| TCTTCTCGTAGATCCCTTAA+AGG | + | chr4.1:16336606-16336625 | MS.gene08312:CDS | 40.0% | |
| TGTTGTCAGATCTGATGCAA+AGG | + | chr4.1:16336772-16336791 | MS.gene08312:CDS | 40.0% | |
| TTCAACACCTTATAACGCGA+AGG | + | chr4.1:16339093-16339112 | MS.gene08312:CDS | 40.0% | |
| TTGAAGAAGCTGAGATGGTT+AGG | + | chr4.1:16339224-16339243 | MS.gene08312:CDS | 40.0% | |
| ! | AGAAGAAAGGAGTAGCTTGT+TGG | - | chr4.1:16336592-16336611 | None:intergenic | 40.0% |
| ! | CATCTGGGATTCTTTCCTTA+AGG | - | chr4.1:16339186-16339205 | None:intergenic | 40.0% |
| ! | TACACGTATCGGAGAAGTAT+CGG | - | chr4.1:16338119-16338138 | None:intergenic | 40.0% |
| !! | GAGTAGCTTGTTGGAATCAA+AGG | - | chr4.1:16336583-16336602 | None:intergenic | 40.0% |
| !! | GATGTCTTGTTGTTCCTAGA+TGG | - | chr4.1:16338501-16338520 | None:intergenic | 40.0% |
| !! | TAGGAGCATCCAAATAGTCA+TGG | - | chr4.1:16339492-16339511 | None:intergenic | 40.0% |
| !! | TGAAGGCATTCTCAGCAATA+GGG | - | chr4.1:16338820-16338839 | None:intergenic | 40.0% |
| !! | TGGAATTGGTGCTAGTTTGA+CGG | + | chr4.1:16339447-16339466 | MS.gene08312:CDS | 40.0% |
| AACATTGGAGGAATGGACAG+TGG | + | chr4.1:16339555-16339574 | MS.gene08312:CDS | 45.0% | |
| AACTGAGTATAACTCACCGG+AGG | + | chr4.1:16337797-16337816 | MS.gene08312:intron | 45.0% | |
| AATGTTCCGGCATATGGAGT+CGG | - | chr4.1:16339541-16339560 | None:intergenic | 45.0% | |
| ACTGCAGTCACAATTTGAGC+AGG | - | chr4.1:16339586-16339605 | None:intergenic | 45.0% | |
| AGCTCCCAATCCTTGGAAAA+GGG | - | chr4.1:16336547-16336566 | None:intergenic | 45.0% | |
| AGGGAATAGCCATCACTTAG+TGG | + | chr4.1:16337885-16337904 | MS.gene08312:intron | 45.0% | |
| ATATGGCCTAAACTGTGGAG+GGG | + | chr4.1:16338248-16338267 | MS.gene08312:intron | 45.0% | |
| ATCAAGCCCTTCGCGTTATA+AGG | - | chr4.1:16339103-16339122 | None:intergenic | 45.0% | |
| ATCAATCCCTGGCATTCAGA+TGG | + | chr4.1:16339063-16339082 | MS.gene08312:CDS | 45.0% | |
| ATCCGTATCGTGTCAGGTAT+CGG | - | chr4.1:16337372-16337391 | None:intergenic | 45.0% | |
| ATGCTGCATTATACGTCTGG+AGG | + | chr4.1:16338947-16338966 | MS.gene08312:CDS | 45.0% | |
| ATGTTCATGCCCTCGATGAT+TGG | - | chr4.1:16338881-16338900 | None:intergenic | 45.0% | |
| ATTGCTGAGAATGCCTTCAC+TGG | + | chr4.1:16338821-16338840 | MS.gene08312:CDS | 45.0% | |
| CAGTCACAATTTGAGCAGGT+TGG | - | chr4.1:16339582-16339601 | None:intergenic | 45.0% | |
| CATGACATGATACCTCATCC+TGG | - | chr4.1:16339281-16339300 | None:intergenic | 45.0% | |
| CCAAGACATTGGTGAACAAG+GGG | + | chr4.1:16339308-16339327 | MS.gene08312:CDS | 45.0% | |
| GAGAATGCCTTCACTGGAAT+GGG | + | chr4.1:16338827-16338846 | MS.gene08312:CDS | 45.0% | |
| GCCAAGACATTGGTGAACAA+GGG | + | chr4.1:16339307-16339326 | MS.gene08312:CDS | 45.0% | |
| GGAATGCTGCATTATACGTC+TGG | + | chr4.1:16338944-16338963 | MS.gene08312:CDS | 45.0% | |
| GGATCCTTGTGTTTGTGTCA+TGG | + | chr4.1:16338709-16338728 | MS.gene08312:CDS | 45.0% | |
| GTCACTTGAAGAAGCTGAGA+TGG | + | chr4.1:16339219-16339238 | MS.gene08312:CDS | 45.0% | |
| GTCTTCATGCTGGGACTAAA+AGG | - | chr4.1:16338297-16338316 | None:intergenic | 45.0% | |
| TATCGTATCCGTATCGTGTC+AGG | - | chr4.1:16337378-16337397 | None:intergenic | 45.0% | |
| TCACCCATGACACAAACACA+AGG | - | chr4.1:16338716-16338735 | None:intergenic | 45.0% | |
| TCCAATACCCATTCCAGTGA+AGG | - | chr4.1:16338837-16338856 | None:intergenic | 45.0% | |
| TCTTTACCCCTCCACAGTTT+AGG | - | chr4.1:16338257-16338276 | None:intergenic | 45.0% | |
| TGAGAATGCCTTCACTGGAA+TGG | + | chr4.1:16338826-16338845 | MS.gene08312:CDS | 45.0% | |
| TGCCAAGACATTGGTGAACA+AGG | + | chr4.1:16339306-16339325 | MS.gene08312:CDS | 45.0% | |
| TGTCCATTCCTCCAATGTTC+CGG | - | chr4.1:16339554-16339573 | None:intergenic | 45.0% | |
| TGTGTCATGGGTGAAGATGT+AGG | + | chr4.1:16338722-16338741 | MS.gene08312:CDS | 45.0% | |
| TTCTTCCAATCCTTCACGCA+GGG | - | chr4.1:16338678-16338697 | None:intergenic | 45.0% | |
| TTGTAGGGGAAAACATACCC+AGG | - | chr4.1:16337004-16337023 | None:intergenic | 45.0% | |
| ! | AATCATCGAGGGCATGAACA+TGG | + | chr4.1:16338880-16338899 | MS.gene08312:CDS | 45.0% |
| ! | ATCATCGAGGGCATGAACAT+GGG | + | chr4.1:16338881-16338900 | MS.gene08312:CDS | 45.0% |
| ! | GCAACCCTTTTCCAAGGATT+GGG | + | chr4.1:16336540-16336559 | MS.gene08312:CDS | 45.0% |
| ! | GTGAGCAAGACTTTGAAGAC+TGG | + | chr4.1:16336794-16336813 | MS.gene08312:CDS | 45.0% |
| !! | CGGTGGTAATGGTTAGAAGA+GGG | + | chr4.1:16337866-16337885 | MS.gene08312:intron | 45.0% |
| !! | GAAGGCATTCTCAGCAATAG+GGG | - | chr4.1:16338819-16338838 | None:intergenic | 45.0% |
| !! | GTGAAGGCATTCTCAGCAAT+AGG | - | chr4.1:16338821-16338840 | None:intergenic | 45.0% |
| !! | TCGGTGGTAATGGTTAGAAG+AGG | + | chr4.1:16337865-16337884 | MS.gene08312:intron | 45.0% |
| AAGCGACCATCTGAATGCCA+GGG | - | chr4.1:16339072-16339091 | None:intergenic | 50.0% | |
| ACATCGGGTTCTCATAGTGG+AGG | + | chr4.1:16339408-16339427 | MS.gene08312:CDS | 50.0% | |
| AGGTAACAGCTCCCAATCCT+TGG | - | chr4.1:16336554-16336573 | None:intergenic | 50.0% | |
| ATGCCGGAACATTGGAGGAA+TGG | + | chr4.1:16339548-16339567 | MS.gene08312:CDS | 50.0% | |
| ATTGCCTCCATCAACACCTC+CGG | - | chr4.1:16337816-16337835 | None:intergenic | 50.0% | |
| CAGCTCCCAATCCTTGGAAA+AGG | - | chr4.1:16336548-16336567 | None:intergenic | 50.0% | |
| CATGCAAGCTGCCAAGACAT+TGG | + | chr4.1:16339297-16339316 | MS.gene08312:CDS | 50.0% | |
| CCCCTTGTTCACCAATGTCT+TGG | - | chr4.1:16339311-16339330 | None:intergenic | 50.0% | |
| CTGTACGAAGCATACGCTGA+AGG | - | chr4.1:16337317-16337336 | None:intergenic | 50.0% | |
| CTTCACGCAGGGCTTCAAAA+AGG | - | chr4.1:16338667-16338686 | None:intergenic | 50.0% | |
| CTTCTTCCAATCCTTCACGC+AGG | - | chr4.1:16338679-16338698 | None:intergenic | 50.0% | |
| GACACATCGGGTTCTCATAG+TGG | + | chr4.1:16339405-16339424 | MS.gene08312:CDS | 50.0% | |
| GACTCCATATGCCGGAACAT+TGG | + | chr4.1:16339540-16339559 | MS.gene08312:CDS | 50.0% | |
| GCCTTCACTGGAATGGGTAT+TGG | + | chr4.1:16338833-16338852 | MS.gene08312:CDS | 50.0% | |
| TCCATATGCCGGAACATTGG+AGG | + | chr4.1:16339543-16339562 | MS.gene08312:CDS | 50.0% | |
| TCCGTATCGTGTCAGGTATC+GGG | - | chr4.1:16337371-16337390 | None:intergenic | 50.0% | |
| TCCTCCAATGTTCCGGCATA+TGG | - | chr4.1:16339547-16339566 | None:intergenic | 50.0% | |
| TCCTCGTCACCACTAAGTGA+TGG | - | chr4.1:16337897-16337916 | None:intergenic | 50.0% | |
| TTTCGATGCTGCAGAAGTCG+CGG | - | chr4.1:16336981-16337000 | None:intergenic | 50.0% | |
| ! | ACTTCTGCAGCATCGAAACC+TGG | + | chr4.1:16336983-16337002 | MS.gene08312:CDS | 50.0% |
| ! | CTTCTGCAGCATCGAAACCT+GGG | + | chr4.1:16336984-16337003 | MS.gene08312:CDS | 50.0% |
| ! | GGCAACCCTTTTCCAAGGAT+TGG | + | chr4.1:16336539-16336558 | MS.gene08312:CDS | 50.0% |
| ! | GGGGCTTCATAGCTTTTCAG+TGG | - | chr4.1:16337351-16337370 | None:intergenic | 50.0% |
| ! | GGTCGCCAAACTTTTCAGCT+AGG | - | chr4.1:16338781-16338800 | None:intergenic | 50.0% |
| ! | GTTTGGCGACCTCAGAGTTT+TGG | + | chr4.1:16338790-16338809 | MS.gene08312:CDS | 50.0% |
| ! | TCATAGTGGAGGAGTGCATG+CGG | + | chr4.1:16339419-16339438 | MS.gene08312:CDS | 50.0% |
| !! | TAACTCACCGGAGGTGTTGA+TGG | + | chr4.1:16337806-16337825 | MS.gene08312:intron | 50.0% |
| !! | TAGGGGTGTCCAAAACTCTG+AGG | - | chr4.1:16338802-16338821 | None:intergenic | 50.0% |
| !!! | CTTTTTGAAGCCCTGCGTGA+AGG | + | chr4.1:16338665-16338684 | MS.gene08312:CDS | 50.0% |
| AAGCTGAGATGGTTAGGCCC+GGG | + | chr4.1:16339230-16339249 | MS.gene08312:CDS | 55.0% | |
| AAGTTGCCGACCAACTCCAC+CGG | - | chr4.1:16339005-16339024 | None:intergenic | 55.0% | |
| CAAGCGACCATCTGAATGCC+AGG | - | chr4.1:16339073-16339092 | None:intergenic | 55.0% | |
| CCCCGATACCTGACACGATA+CGG | + | chr4.1:16337367-16337386 | MS.gene08312:intron | 55.0% | |
| GAAGCTGAGATGGTTAGGCC+CGG | + | chr4.1:16339229-16339248 | MS.gene08312:CDS | 55.0% | |
| TGAAGCCCTGCGTGAAGGAT+TGG | + | chr4.1:16338670-16338689 | MS.gene08312:CDS | 55.0% | |
| ! | CCGTATCGTGTCAGGTATCG+GGG | - | chr4.1:16337370-16337389 | None:intergenic | 55.0% |
| ! | GCCATCACTTAGTGGTGACG+AGG | + | chr4.1:16337893-16337912 | MS.gene08312:intron | 55.0% |
| ! | GGTATTGGAGCTGCCATGAC+TGG | + | chr4.1:16338848-16338867 | MS.gene08312:CDS | 55.0% |
| ! | GGTCTGAGGCCAATCATCGA+GGG | + | chr4.1:16338869-16338888 | MS.gene08312:CDS | 55.0% |
| ! | TGGTCTGAGGCCAATCATCG+AGG | + | chr4.1:16338868-16338887 | MS.gene08312:CDS | 55.0% |
| !! | GATGTGCCGACTCCATATGC+CGG | + | chr4.1:16339532-16339551 | MS.gene08312:CDS | 55.0% |
| !! | GATTGGCCTCAGACCAGTCA+TGG | - | chr4.1:16338864-16338883 | None:intergenic | 55.0% |
| AGCAGAACACTCGCAGCGTC+TGG | + | chr4.1:16339027-16339046 | MS.gene08312:CDS | 60.0% | |
| AGCTGAGATGGTTAGGCCCG+GGG | + | chr4.1:16339231-16339250 | MS.gene08312:CDS | 60.0% | |
| AGTTGCCGACCAACTCCACC+GGG | - | chr4.1:16339004-16339023 | None:intergenic | 60.0% | |
| CCAGTTGTCATTCGTGGGCC+CGG | + | chr4.1:16338983-16339002 | MS.gene08312:CDS | 60.0% | |
| TGCATGCGGACGGGTGGAAT+TGG | + | chr4.1:16339433-16339452 | MS.gene08312:CDS | 60.0% | |
| TGGAGTCGGCACATCCTGAG+AGG | - | chr4.1:16339527-16339546 | None:intergenic | 60.0% | |
| ! | AGTGGAGGAGTGCATGCGGA+CGG | + | chr4.1:16339423-16339442 | MS.gene08312:CDS | 60.0% |
| ! | GGTGGAGTTGGTCGGCAACT+TGG | + | chr4.1:16339004-16339023 | MS.gene08312:CDS | 60.0% |
| !! | CTCACCGGAGGTGTTGATGG+AGG | + | chr4.1:16337809-16337828 | MS.gene08312:intron | 60.0% |
| !! | GAGCTGCCATGACTGGTCTG+AGG | + | chr4.1:16338855-16338874 | MS.gene08312:CDS | 60.0% |
| ATTCGTGGGCCCGGTGGAGT+TGG | + | chr4.1:16338992-16339011 | MS.gene08312:CDS | 65.0% | |
| CCGGGCCCACGAATGACAAC+TGG | - | chr4.1:16338986-16339005 | None:intergenic | 65.0% | |
| GTTGTCATTCGTGGGCCCGG+TGG | + | chr4.1:16338986-16339005 | MS.gene08312:CDS | 65.0% | |
| ! | GTGGAGGAGTGCATGCGGAC+GGG | + | chr4.1:16339424-16339443 | MS.gene08312:CDS | 65.0% |
| ! | GAGGAGTGCATGCGGACGGG+TGG | + | chr4.1:16339427-16339446 | MS.gene08312:CDS | 70.0% |
| ! | GTGGGCCCGGTGGAGTTGGT+CGG | + | chr4.1:16338996-16339015 | MS.gene08312:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 16336537 | 16339624 | 16336537 | ID=MS.gene08312 |
| chr4.1 | mRNA | 16336537 | 16339624 | 16336537 | ID=MS.gene08312.t1;Parent=MS.gene08312 |
| chr4.1 | exon | 16336537 | 16336627 | 16336537 | ID=MS.gene08312.t1.exon1;Parent=MS.gene08312.t1 |
| chr4.1 | CDS | 16336537 | 16336627 | 16336537 | ID=cds.MS.gene08312.t1;Parent=MS.gene08312.t1 |
| chr4.1 | exon | 16336753 | 16336859 | 16336753 | ID=MS.gene08312.t1.exon2;Parent=MS.gene08312.t1 |
| chr4.1 | CDS | 16336753 | 16336859 | 16336753 | ID=cds.MS.gene08312.t1;Parent=MS.gene08312.t1 |
| chr4.1 | exon | 16336962 | 16337005 | 16336962 | ID=MS.gene08312.t1.exon3;Parent=MS.gene08312.t1 |
| chr4.1 | CDS | 16336962 | 16337005 | 16336962 | ID=cds.MS.gene08312.t1;Parent=MS.gene08312.t1 |
| chr4.1 | exon | 16338652 | 16339624 | 16338652 | ID=MS.gene08312.t1.exon4;Parent=MS.gene08312.t1 |
| chr4.1 | CDS | 16338652 | 16339624 | 16338652 | ID=cds.MS.gene08312.t1;Parent=MS.gene08312.t1 |
| Gene Sequence |
| Protein sequence |
