Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81790.t1 | XP_003604926.1 | 98.1 | 319 | 6 | 0 | 1 | 319 | 1 | 319 | 9.70E-182 | 646 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81790.t1 | Q9SAV3 | 93.0 | 284 | 20 | 0 | 36 | 319 | 30 | 313 | 1.7e-158 | 560.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81790.t1 | G7JTF7 | 98.1 | 319 | 6 | 0 | 1 | 319 | 1 | 319 | 7.0e-182 | 646.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene81790 | MS.gene050322 | PPI |
| MS.gene041602 | MS.gene81790 | PPI |
| MS.gene041600 | MS.gene81790 | PPI |
| MS.gene97445 | MS.gene81790 | PPI |
| MS.gene70694 | MS.gene81790 | PPI |
| MS.gene023314 | MS.gene81790 | PPI |
| MS.gene066363 | MS.gene81790 | PPI |
| MS.gene035364 | MS.gene81790 | PPI |
| MS.gene34923 | MS.gene81790 | PPI |
| MS.gene035365 | MS.gene81790 | PPI |
| MS.gene000681 | MS.gene81790 | PPI |
| MS.gene022368 | MS.gene81790 | PPI |
| MS.gene81790 | MS.gene08312 | PPI |
| MS.gene000331 | MS.gene81790 | PPI |
| MS.gene81790 | MS.gene007227 | PPI |
| MS.gene54337 | MS.gene81790 | PPI |
| MS.gene81790 | MS.gene28855 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81790.t1 | MTR_4g021470 | 98.119 | 319 | 6 | 0 | 1 | 319 | 1 | 319 | 0.0 | 647 |
| MS.gene81790.t1 | MTR_7g005380 | 36.458 | 288 | 178 | 3 | 33 | 316 | 23 | 309 | 2.13e-61 | 200 |
| MS.gene81790.t1 | MTR_3g076630 | 38.989 | 277 | 166 | 3 | 38 | 313 | 83 | 357 | 9.37e-58 | 192 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81790.t1 | AT1G55510 | 92.958 | 284 | 20 | 0 | 36 | 319 | 30 | 313 | 0.0 | 560 |
| MS.gene81790.t1 | AT3G13450 | 89.041 | 292 | 31 | 1 | 28 | 319 | 29 | 319 | 0.0 | 548 |
| MS.gene81790.t1 | AT5G50850 | 37.847 | 288 | 174 | 3 | 34 | 317 | 32 | 318 | 6.19e-64 | 206 |
| MS.gene81790.t1 | AT1G30120 | 40.138 | 289 | 169 | 4 | 26 | 313 | 75 | 360 | 1.25e-62 | 204 |
| MS.gene81790.t1 | AT2G34590 | 38.387 | 310 | 180 | 5 | 13 | 313 | 53 | 360 | 2.85e-61 | 201 |
Find 86 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTACCGCCACAATTAAAT+TGG | 0.260322 | 4.2:-81061457 | None:intergenic |
| ATTGGGAAAATGGGTTTCTT+TGG | 0.274502 | 4.2:+81058959 | MS.gene81790:CDS |
| GCTTTCTTCTGTCATGTTCC+TGG | 0.276789 | 4.2:+81061641 | MS.gene81790:CDS |
| GCTCCGGTGACCGGAGGTTT+TGG | 0.293409 | 4.2:+81063388 | MS.gene81790:CDS |
| GTGTGAAGAGATTGGGAAAA+TGG | 0.298675 | 4.2:+81058949 | MS.gene81790:CDS |
| TTAACAATTAGAACCCCTTA+TGG | 0.304867 | 4.2:+81061575 | MS.gene81790:CDS |
| CTTGATTAATAGCAGAATAA+AGG | 0.338144 | 4.2:-81059055 | None:intergenic |
| GGCGTGTTCCGTTGCACAAC+TGG | 0.342467 | 4.2:+81060753 | MS.gene81790:CDS |
| GGGAGCTCAATTGTCTATAA+TGG | 0.343753 | 4.2:+81062719 | MS.gene81790:CDS |
| TGTACCTCGGCCTCAGATAA+AGG | 0.359021 | 4.2:-81062570 | None:intergenic |
| GTTTCAGTGGCTTTATCGTT+TGG | 0.377268 | 4.2:+81062512 | MS.gene81790:intron |
| TCAAGCTCTTCATATTGCTT+TGG | 0.381002 | 4.2:+81059073 | MS.gene81790:CDS |
| AATGGGTTTCTTTGGCTTCA+AGG | 0.382551 | 4.2:+81058967 | MS.gene81790:CDS |
| AACGCTGCTTCTCAAGGGTA+TGG | 0.385769 | 4.2:+81063437 | MS.gene81790:CDS |
| GGTATCGTTGGCTTTGGAAT+TGG | 0.389574 | 4.2:+81061119 | MS.gene81790:CDS |
| TTCGGAGAAGATGTAGGCTT+TGG | 0.391728 | 4.2:+81060729 | MS.gene81790:CDS |
| TCGCAGGGTATCGTTGGCTT+TGG | 0.397957 | 4.2:+81061113 | MS.gene81790:intron |
| GGAAGCGATATTACACTTGT+TGG | 0.415313 | 4.2:+81062693 | MS.gene81790:CDS |
| ATCTGAAGACACTAATTCCT+TGG | 0.418114 | 4.2:+81063220 | MS.gene81790:CDS |
| TGAAGTTATGAGTTAAAAGT+TGG | 0.420678 | 4.2:-81063462 | None:intergenic |
| GGTTTCTTTGGCTTCAAGGA+GGG | 0.429417 | 4.2:+81058971 | MS.gene81790:CDS |
| TTTGCTTCCTTTGGACTTCG+AGG | 0.429912 | 4.2:-81062332 | None:intergenic |
| ACTGGATTAGCAGACCGATT+TGG | 0.437170 | 4.2:+81060771 | MS.gene81790:CDS |
| GGAGAAGATGTAGGCTTTGG+TGG | 0.452189 | 4.2:+81060732 | MS.gene81790:CDS |
| CATGGCCAACAGCTCCATAA+GGG | 0.452887 | 4.2:-81061589 | None:intergenic |
| GTTTCTTTGGCTTCAAGGAG+GGG | 0.455270 | 4.2:+81058972 | MS.gene81790:CDS |
| CGAAGTCCAAAGGAAGCAAA+AGG | 0.458646 | 4.2:+81062335 | MS.gene81790:CDS |
| CTGTCATGTTCCTGGTATCA+AGG | 0.467973 | 4.2:+81061649 | MS.gene81790:CDS |
| TGTGAAGAGATTGGGAAAAT+GGG | 0.471202 | 4.2:+81058950 | MS.gene81790:CDS |
| TTCTTGAACGCTGCTTCTCA+AGG | 0.473251 | 4.2:+81063431 | MS.gene81790:CDS |
| CCATGGCCAACAGCTCCATA+AGG | 0.473283 | 4.2:-81061590 | None:intergenic |
| TTGCTTCCTTTGGACTTCGA+GGG | 0.478535 | 4.2:-81062331 | None:intergenic |
| GTCAACTTCCATTGTTCAGA+AGG | 0.479003 | 4.2:+81058998 | MS.gene81790:CDS |
| GTCACCATGTGTGAAGAGAT+TGG | 0.482522 | 4.2:+81058941 | MS.gene81790:CDS |
| CAATACTCCTCTCTGTGAGC+AGG | 0.484075 | 4.2:+81060809 | MS.gene81790:CDS |
| CGATATTACACTTGTTGGAT+GGG | 0.488766 | 4.2:+81062698 | MS.gene81790:CDS |
| GCGATATTACACTTGTTGGA+TGG | 0.493378 | 4.2:+81062697 | MS.gene81790:CDS |
| TGGAATTGGTCTAGCAGCTA+TGG | 0.499345 | 4.2:+81061133 | MS.gene81790:CDS |
| AGTCATGAAGCTCCGGTGAC+CGG | 0.500162 | 4.2:+81063379 | MS.gene81790:CDS |
| TGCTACTCGCAGGGTATCGT+TGG | 0.502027 | 4.2:+81061107 | MS.gene81790:intron |
| AATTAAATTGGTTTCCACTC+CGG | 0.508731 | 4.2:-81061445 | None:intergenic |
| TGAGAAGCAGCGTTCAAGAA+TGG | 0.508954 | 4.2:-81063428 | None:intergenic |
| TGCGAACTGGATTTCTGCTA+TGG | 0.509761 | 4.2:-81061287 | None:intergenic |
| TCTGAAGACACTAATTCCTT+GGG | 0.514920 | 4.2:+81063221 | MS.gene81790:CDS |
| TCCACAGTTTCTTTATCCCA+AGG | 0.519849 | 4.2:-81063237 | None:intergenic |
| GCACCAAAACCTCCGGTCAC+CGG | 0.522119 | 4.2:-81063391 | None:intergenic |
| AGAACCCCTTATGGAGCTGT+TGG | 0.527687 | 4.2:+81061584 | MS.gene81790:CDS |
| TCACCATGTGTGAAGAGATT+GGG | 0.530158 | 4.2:+81058942 | MS.gene81790:CDS |
| ACTTCCATTGTTCAGAAGGA+TGG | 0.537631 | 4.2:+81059002 | MS.gene81790:CDS |
| GTTGCCTTTATCTGAGGCCG+AGG | 0.541871 | 4.2:+81062566 | MS.gene81790:CDS |
| ACATGACAGAAGAAAGCCTC+AGG | 0.547527 | 4.2:-81061635 | None:intergenic |
| CCTTATGGAGCTGTTGGCCA+TGG | 0.547588 | 4.2:+81061590 | MS.gene81790:CDS |
| AAGGATGGTGCTGCTGAGAA+TGG | 0.551789 | 4.2:+81059017 | MS.gene81790:CDS |
| TATGGAGCTGTTGGCCATGG+TGG | 0.555046 | 4.2:+81061593 | MS.gene81790:CDS |
| GAGCATGCCTGATCAAAAGC+AGG | 0.557132 | 4.2:-81061322 | None:intergenic |
| GTAGATCAGTCATGAAGCTC+CGG | 0.560997 | 4.2:+81063372 | MS.gene81790:intron |
| AAGCTGCTAAGTTTAGATAC+CGG | 0.563115 | 4.2:+81061426 | MS.gene81790:CDS |
| AGTGGAAACCAATTTAATTG+TGG | 0.570760 | 4.2:+81061449 | MS.gene81790:CDS |
| TTGCTTTGGACACTGATCCT+CGG | 0.570770 | 4.2:+81059087 | MS.gene81790:CDS |
| ACGCTGCTTCTCAAGGGTAT+GGG | 0.570858 | 4.2:+81063438 | MS.gene81790:CDS |
| CTTATTCAGGTGATTCGAGA+AGG | 0.572810 | 4.2:+81062672 | MS.gene81790:intron |
| GGCAACATGTAATCACCCTC+TGG | 0.573628 | 4.2:-81062549 | None:intergenic |
| TTACATGTTGCCTTTATCTG+AGG | 0.573657 | 4.2:+81062560 | MS.gene81790:CDS |
| GGAAACCAATTTAATTGTGG+CGG | 0.584601 | 4.2:+81061452 | MS.gene81790:CDS |
| ACCCTCTGGTACTTCTTCAA+CGG | 0.586362 | 4.2:-81062535 | None:intergenic |
| CTGCTAATCCAGTTGTGCAA+CGG | 0.596759 | 4.2:-81060761 | None:intergenic |
| GATTTCAGCACCAAAACCTC+CGG | 0.598250 | 4.2:-81063398 | None:intergenic |
| TCTTGAACGCTGCTTCTCAA+GGG | 0.599173 | 4.2:+81063432 | MS.gene81790:CDS |
| TTTCCCAATCTCTTCACACA+TGG | 0.603446 | 4.2:-81058945 | None:intergenic |
| GAAGTCCAAAGGAAGCAAAA+GGG | 0.605180 | 4.2:+81062336 | MS.gene81790:CDS |
| GGGTTTCTTTGGCTTCAAGG+AGG | 0.605274 | 4.2:+81058970 | MS.gene81790:CDS |
| CGTCATCCCTCGAAGTCCAA+AGG | 0.607275 | 4.2:+81062325 | MS.gene81790:CDS |
| AAACACCATACCTTGATACC+AGG | 0.612193 | 4.2:-81061659 | None:intergenic |
| GATATTACACTTGTTGGATG+GGG | 0.617699 | 4.2:+81062699 | MS.gene81790:CDS |
| AGCACCATCCTTCTGAACAA+TGG | 0.633968 | 4.2:-81059006 | None:intergenic |
| GCCGTTGAAGAAGTACCAGA+GGG | 0.638851 | 4.2:+81062534 | MS.gene81790:CDS |
| AAGCCTCAGGAGATTGAGAG+TGG | 0.639692 | 4.2:-81061622 | None:intergenic |
| CATGAAGCTCCGGTGACCGG+AGG | 0.639722 | 4.2:+81063382 | MS.gene81790:CDS |
| GGCCGTTGAAGAAGTACCAG+AGG | 0.641932 | 4.2:+81062533 | MS.gene81790:CDS |
| TCCTTGGGATAAAGAAACTG+TGG | 0.648165 | 4.2:+81063236 | MS.gene81790:CDS |
| ATGGCCAACAGCTCCATAAG+GGG | 0.659107 | 4.2:-81061588 | None:intergenic |
| TTACCACTCTCAATCTCCTG+AGG | 0.681438 | 4.2:+81061619 | MS.gene81790:CDS |
| TTGGGATAAAGAAACTGTGG+AGG | 0.692494 | 4.2:+81063239 | MS.gene81790:CDS |
| GAGAGTGGTAATGTCCACCA+TGG | 0.697263 | 4.2:-81061607 | None:intergenic |
| TCAAATACCTGCTCACAGAG+AGG | 0.697533 | 4.2:-81060816 | None:intergenic |
| GCTAAGTTTAGATACCGGAG+TGG | 0.735679 | 4.2:+81061431 | MS.gene81790:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATAGTAATATATTCTCA+TGG | - | chr4.2:81063096-81063115 | None:intergenic | 15.0% |
| !! | AATTTCGAAAATAATTTAGA+TGG | + | chr4.2:81062868-81062887 | MS.gene81790:intron | 15.0% |
| !!! | GAAATTAAAGTTTTAGAATT+TGG | + | chr4.2:81059997-81060016 | MS.gene81790:intron | 15.0% |
| !!! | TATGACTTTATTTTATCTTT+TGG | - | chr4.2:81061965-81061984 | None:intergenic | 15.0% |
| !!! | TTGTTGTTAATTATGTTTAA+TGG | - | chr4.2:81062974-81062993 | None:intergenic | 15.0% |
| !! | AATTACATCTAGTACTAATT+TGG | + | chr4.2:81062216-81062235 | MS.gene81790:intron | 20.0% |
| !! | AATTTCGTAATAAAGGTTAA+CGG | - | chr4.2:81059586-81059605 | None:intergenic | 20.0% |
| !! | ACAAACAGTGAATATATATA+TGG | + | chr4.2:81060621-81060640 | MS.gene81790:intron | 20.0% |
| !! | ATGTTATTGTTACAAAACTT+AGG | + | chr4.2:81059696-81059715 | MS.gene81790:intron | 20.0% |
| !! | GATATATAAATTTGACGTAA+CGG | - | chr4.2:81061510-81061529 | None:intergenic | 20.0% |
| !! | TCAAAAAATACAATAGGATT+CGG | - | chr4.2:81062386-81062405 | None:intergenic | 20.0% |
| !! | TCTATGTTACTAATATGATA+TGG | - | chr4.2:81062092-81062111 | None:intergenic | 20.0% |
| !! | TGTATACAGGATATTTATAT+AGG | - | chr4.2:81060667-81060686 | None:intergenic | 20.0% |
| !! | TGTTAATTATGTTTAATGGA+TGG | - | chr4.2:81062970-81062989 | None:intergenic | 20.0% |
| !!! | AATTTGAAGATAATGGAAAA+AGG | - | chr4.2:81060586-81060605 | None:intergenic | 20.0% |
| !!! | ATTTTATTACGAAATTTTGC+AGG | + | chr4.2:81063173-81063192 | MS.gene81790:intron | 20.0% |
| !!! | CATAATAATGTTTTACACAA+AGG | - | chr4.2:81059978-81059997 | None:intergenic | 20.0% |
| !!! | TAAAGTTTTAGAATTTGGAT+TGG | + | chr4.2:81060002-81060021 | MS.gene81790:intron | 20.0% |
| !!! | TATCTGTTTATTTTAAACCA+GGG | - | chr4.2:81060879-81060898 | None:intergenic | 20.0% |
| !!! | TATTGTATTTTTTGAACCAA+AGG | + | chr4.2:81062391-81062410 | MS.gene81790:CDS | 20.0% |
| !!! | TGTGTTATTATGAATTCAAT+TGG | + | chr4.2:81060450-81060469 | MS.gene81790:intron | 20.0% |
| !!! | TTATATGTTACTTCATATCA+GGG | + | chr4.2:81061256-81061275 | MS.gene81790:intron | 20.0% |
| !!! | TTCATTTCTTTTTCTTTATC+AGG | + | chr4.2:81059119-81059138 | MS.gene81790:intron | 20.0% |
| !!! | TTTGGTTCAAAAAATACAAT+AGG | - | chr4.2:81062392-81062411 | None:intergenic | 20.0% |
| ! | AAAAAAATCTTGTAACTCAC+AGG | + | chr4.2:81060946-81060965 | MS.gene81790:intron | 25.0% |
| ! | AAAAAATCTTGTAACTCACA+GGG | + | chr4.2:81060947-81060966 | MS.gene81790:intron | 25.0% |
| ! | AAATGCAAAAGGAGAATATA+AGG | - | chr4.2:81060691-81060710 | None:intergenic | 25.0% |
| ! | AAATTTCTCTGTACTTATTC+AGG | + | chr4.2:81062659-81062678 | MS.gene81790:intron | 25.0% |
| ! | ATAACAGACAGATTCTTATA+TGG | - | chr4.2:81059678-81059697 | None:intergenic | 25.0% |
| ! | CAGAATAAGAATAAAACCTT+TGG | - | chr4.2:81062410-81062429 | None:intergenic | 25.0% |
| ! | CTTGATTAATAGCAGAATAA+AGG | - | chr4.2:81059058-81059077 | None:intergenic | 25.0% |
| ! | GATCAGTAATTGACTAATTT+CGG | + | chr4.2:81061386-81061405 | MS.gene81790:intron | 25.0% |
| ! | GATTATATCAGATTGTAGTA+AGG | - | chr4.2:81061205-81061224 | None:intergenic | 25.0% |
| ! | GTAATATATTCTCATGGAAA+TGG | - | chr4.2:81063090-81063109 | None:intergenic | 25.0% |
| ! | TAATGTAACTGAAGGAATTA+TGG | - | chr4.2:81060559-81060578 | None:intergenic | 25.0% |
| ! | TCAGTTCTCATAAATCTTAA+AGG | - | chr4.2:81062146-81062165 | None:intergenic | 25.0% |
| ! | TCATCGAAATTTCGTAATAA+AGG | - | chr4.2:81059593-81059612 | None:intergenic | 25.0% |
| ! | TGAAGTTATGAGTTAAAAGT+TGG | - | chr4.2:81063465-81063484 | None:intergenic | 25.0% |
| ! | TGACAAAGACATAAAGTAAA+AGG | - | chr4.2:81059850-81059869 | None:intergenic | 25.0% |
| ! | TGTGATACAAAACAAAACTT+AGG | + | chr4.2:81059254-81059273 | MS.gene81790:intron | 25.0% |
| ! | TTATGTCTTTGTCAAAACTA+CGG | + | chr4.2:81059856-81059875 | MS.gene81790:intron | 25.0% |
| ! | TTTATATTTCAGCTCATCAA+TGG | + | chr4.2:81060387-81060406 | MS.gene81790:intron | 25.0% |
| !! | CTTATATGTTACTTCATATC+AGG | + | chr4.2:81061255-81061274 | MS.gene81790:intron | 25.0% |
| !! | GTTGAGTTTCTTCTTTTTAT+TGG | + | chr4.2:81061027-81061046 | MS.gene81790:intron | 25.0% |
| !!! | AAACCCTATTTTTACCAAAT+CGG | - | chr4.2:81060788-81060807 | None:intergenic | 25.0% |
| !!! | AAACTTTTTCACATTGTTGT+AGG | + | chr4.2:81061551-81061570 | MS.gene81790:intron | 25.0% |
| !!! | AACAAAAGTACCAAAATATG+AGG | - | chr4.2:81061712-81061731 | None:intergenic | 25.0% |
| !!! | CTGTTTTGAATTGTTATACT+AGG | + | chr4.2:81059312-81059331 | MS.gene81790:intron | 25.0% |
| !!! | GTATCTGTTTATTTTAAACC+AGG | - | chr4.2:81060880-81060899 | None:intergenic | 25.0% |
| !!! | TGTTTTAGATCCTCATATTT+TGG | + | chr4.2:81061699-81061718 | MS.gene81790:intron | 25.0% |
| !!! | TTTGTGGTAATTTTAAGTAC+TGG | - | chr4.2:81059401-81059420 | None:intergenic | 25.0% |
| AAAACTACGGGTTTCTATAA+GGG | + | chr4.2:81059869-81059888 | MS.gene81790:intron | 30.0% | |
| AAGGCTTATAATGTAACTGA+AGG | - | chr4.2:81060567-81060586 | None:intergenic | 30.0% | |
| AATAGCTTGATCATCAAAGT+AGG | + | chr4.2:81061846-81061865 | MS.gene81790:intron | 30.0% | |
| AGTGGAAACCAATTTAATTG+TGG | + | chr4.2:81061449-81061468 | MS.gene81790:CDS | 30.0% | |
| ATAGAATGAATACTGAAACC+TGG | + | chr4.2:81063306-81063325 | MS.gene81790:intron | 30.0% | |
| ATCCATGTCTAGAAATCTAA+AGG | + | chr4.2:81063128-81063147 | MS.gene81790:intron | 30.0% | |
| ATTGCAAATGACACAGTAAA+GGG | - | chr4.2:81059732-81059751 | None:intergenic | 30.0% | |
| ATTTATGAGAACTGAGATAC+TGG | + | chr4.2:81062151-81062170 | MS.gene81790:intron | 30.0% | |
| CAAACTGCAATTACAAATTG+TGG | - | chr4.2:81063054-81063073 | None:intergenic | 30.0% | |
| CTATACCAAAAACATTCTTG+AGG | - | chr4.2:81062303-81062322 | None:intergenic | 30.0% | |
| GAAAAATATAATCTGCGAAC+TGG | - | chr4.2:81061303-81061322 | None:intergenic | 30.0% | |
| GAGAATATAAGGATGTATAC+AGG | - | chr4.2:81060680-81060699 | None:intergenic | 30.0% | |
| GTAGCGAAATTTGAAGATAA+TGG | - | chr4.2:81060593-81060612 | None:intergenic | 30.0% | |
| GTTAATGCAGTTCAAATACA+CGG | + | chr4.2:81062890-81062909 | MS.gene81790:intron | 30.0% | |
| TATGTCTTTGTCAAAACTAC+GGG | + | chr4.2:81059857-81059876 | MS.gene81790:intron | 30.0% | |
| TCACTTTACAAGTCTTAGAA+TGG | - | chr4.2:81060183-81060202 | None:intergenic | 30.0% | |
| TCTCAATGATGAAGAAAAAG+AGG | + | chr4.2:81062600-81062619 | MS.gene81790:intron | 30.0% | |
| TTAACAATTAGAACCCCTTA+TGG | + | chr4.2:81061575-81061594 | MS.gene81790:CDS | 30.0% | |
| TTGTAAGCAGCTTAATCATT+TGG | - | chr4.2:81061750-81061769 | None:intergenic | 30.0% | |
| TTTATGAGAACTGAGATACT+GGG | + | chr4.2:81062152-81062171 | MS.gene81790:intron | 30.0% | |
| TTTCATTTCGCCTAGAAATA+TGG | - | chr4.2:81060241-81060260 | None:intergenic | 30.0% | |
| TTTGATGCTGAAAAAGTAAG+TGG | + | chr4.2:81062753-81062772 | MS.gene81790:intron | 30.0% | |
| ! | AAATGCCTCAAGAATGTTTT+TGG | + | chr4.2:81062295-81062314 | MS.gene81790:intron | 30.0% |
| ! | AATTAAATTGGTTTCCACTC+CGG | - | chr4.2:81061448-81061467 | None:intergenic | 30.0% |
| ! | GTGTTTGATAGTTCTATAGA+CGG | + | chr4.2:81061774-81061793 | MS.gene81790:intron | 30.0% |
| ! | TATTACGAAATTTTGCAGGA+GGG | + | chr4.2:81063177-81063196 | MS.gene81790:intron | 30.0% |
| ! | TTAAGTCGGAATTTCTAAAG+AGG | + | chr4.2:81060122-81060141 | MS.gene81790:intron | 30.0% |
| ! | TTATTACGAAATTTTGCAGG+AGG | + | chr4.2:81063176-81063195 | MS.gene81790:intron | 30.0% |
| !! | AGACCGATTTGGTAAAAATA+GGG | + | chr4.2:81060782-81060801 | MS.gene81790:CDS | 30.0% |
| !! | ATTCTAAGACTTGTAAAGTG+AGG | + | chr4.2:81060182-81060201 | MS.gene81790:intron | 30.0% |
| !! | TATTTTTCCTGCTTTTGATC+AGG | + | chr4.2:81061315-81061334 | MS.gene81790:CDS | 30.0% |
| !! | TCAATCGTCTTTAGAATTTG+TGG | - | chr4.2:81059417-81059436 | None:intergenic | 30.0% |
| !!! | CTCAAGAATGTTTTTGGTAT+AGG | + | chr4.2:81062301-81062320 | MS.gene81790:intron | 30.0% |
| AAGAAACTCAACATCAAACC+AGG | - | chr4.2:81061019-81061038 | None:intergenic | 35.0% | |
| AAGCTGCTAAGTTTAGATAC+CGG | + | chr4.2:81061426-81061445 | MS.gene81790:CDS | 35.0% | |
| ACAAGTCTTAGAATGGAGTT+AGG | - | chr4.2:81060176-81060195 | None:intergenic | 35.0% | |
| ACCACTTAGACCATATTTCT+AGG | + | chr4.2:81060228-81060247 | MS.gene81790:intron | 35.0% | |
| ACGAAATTTCGATGACTAGT+TGG | + | chr4.2:81059598-81059617 | MS.gene81790:intron | 35.0% | |
| ACTCAATCAACCATACCAAA+TGG | + | chr4.2:81060030-81060049 | MS.gene81790:intron | 35.0% | |
| ATCATCAAAGTAGGAAGATC+AGG | + | chr4.2:81061855-81061874 | MS.gene81790:intron | 35.0% | |
| ATCTGAAGACACTAATTCCT+TGG | + | chr4.2:81063220-81063239 | MS.gene81790:CDS | 35.0% | |
| ATGAATACTGAAACCTGGAT+TGG | + | chr4.2:81063311-81063330 | MS.gene81790:intron | 35.0% | |
| CAAAACTACGGGTTTCTATA+AGG | + | chr4.2:81059868-81059887 | MS.gene81790:intron | 35.0% | |
| CAGACACTTCAGGAAAATTT+CGG | - | chr4.2:81060480-81060499 | None:intergenic | 35.0% | |
| CAGATTGTAGTAAGGTTTGT+TGG | - | chr4.2:81061197-81061216 | None:intergenic | 35.0% | |
| CATTGCAAATGACACAGTAA+AGG | - | chr4.2:81059733-81059752 | None:intergenic | 35.0% | |
| CTATAGGTTAATACCAATCC+AGG | - | chr4.2:81063327-81063346 | None:intergenic | 35.0% | |
| CTGAAAAAGTAAGTGGATGT+TGG | + | chr4.2:81062760-81062779 | MS.gene81790:intron | 35.0% | |
| CTTTACCGCCACAATTAAAT+TGG | - | chr4.2:81061460-81061479 | None:intergenic | 35.0% | |
| GAGCTGAAATATAAAGCTTC+CGG | - | chr4.2:81060382-81060401 | None:intergenic | 35.0% | |
| GATGACTTCGAATTAGTAAG+TGG | + | chr4.2:81061999-81062018 | MS.gene81790:intron | 35.0% | |
| GGAAACCAATTTAATTGTGG+CGG | + | chr4.2:81061452-81061471 | MS.gene81790:CDS | 35.0% | |
| GGTAATGAGAGAATTAGGAT+TGG | + | chr4.2:81062173-81062192 | MS.gene81790:intron | 35.0% | |
| GTTCTAACACAAATGAAGCA+TGG | - | chr4.2:81060851-81060870 | None:intergenic | 35.0% | |
| TACTGGGTAATGAGAGAATT+AGG | + | chr4.2:81062168-81062187 | MS.gene81790:intron | 35.0% | |
| TCAAGCTCTTCATATTGCTT+TGG | + | chr4.2:81059073-81059092 | MS.gene81790:CDS | 35.0% | |
| TCAATGCATCATGTAGCTAT+AGG | - | chr4.2:81063343-81063362 | None:intergenic | 35.0% | |
| TCATCAAAGTAGGAAGATCA+GGG | + | chr4.2:81061856-81061875 | MS.gene81790:intron | 35.0% | |
| TCTGAAGACACTAATTCCTT+GGG | + | chr4.2:81063221-81063240 | MS.gene81790:CDS | 35.0% | |
| TCTGAATCGTAAAAATGACG+AGG | + | chr4.2:81059559-81059578 | MS.gene81790:intron | 35.0% | |
| TCTGTGACTCTGAATTCTAT+TGG | + | chr4.2:81060496-81060515 | MS.gene81790:intron | 35.0% | |
| TGTGAAGAGATTGGGAAAAT+GGG | + | chr4.2:81058950-81058969 | MS.gene81790:CDS | 35.0% | |
| TTACATGTTGCCTTTATCTG+AGG | + | chr4.2:81062560-81062579 | MS.gene81790:CDS | 35.0% | |
| TTCCAATACAAAGTTGCTAC+CGG | + | chr4.2:81060360-81060379 | MS.gene81790:intron | 35.0% | |
| TTGCAAATGACACAGTAAAG+GGG | - | chr4.2:81059731-81059750 | None:intergenic | 35.0% | |
| TTGGTATGGTTGATTGAGTT+AGG | - | chr4.2:81060029-81060048 | None:intergenic | 35.0% | |
| ! | AAACATTCTTGAGGCATTTG+CGG | - | chr4.2:81062294-81062313 | None:intergenic | 35.0% |
| ! | AATAACCCTTTTGCTTCCTT+TGG | - | chr4.2:81062344-81062363 | None:intergenic | 35.0% |
| ! | AATTTGAAATGCTACTCGCA+GGG | + | chr4.2:81061098-81061117 | MS.gene81790:intron | 35.0% |
| ! | ACGTAGTTGGAAGATTTTGA+AGG | + | chr4.2:81062031-81062050 | MS.gene81790:intron | 35.0% |
| ! | ATATGGACTACCTTCAAAAG+TGG | - | chr4.2:81059661-81059680 | None:intergenic | 35.0% |
| ! | ATTAGGATTGGTAAAGAGCA+AGG | + | chr4.2:81062185-81062204 | MS.gene81790:intron | 35.0% |
| ! | ATTGGGAAAATGGGTTTCTT+TGG | + | chr4.2:81058959-81058978 | MS.gene81790:CDS | 35.0% |
| ! | ATTTTGAACGTCATCAACCA+CGG | + | chr4.2:81062993-81063012 | MS.gene81790:intron | 35.0% |
| ! | CAAGGTATGGTGTTTTCATT+TGG | + | chr4.2:81061667-81061686 | MS.gene81790:intron | 35.0% |
| ! | CGATATTACACTTGTTGGAT+GGG | + | chr4.2:81062698-81062717 | MS.gene81790:CDS | 35.0% |
| ! | GACCTTTAGATTTCTAGACA+TGG | - | chr4.2:81063133-81063152 | None:intergenic | 35.0% |
| ! | GATATTACACTTGTTGGATG+GGG | + | chr4.2:81062699-81062718 | MS.gene81790:CDS | 35.0% |
| ! | TAATTTGAAATGCTACTCGC+AGG | + | chr4.2:81061097-81061116 | MS.gene81790:intron | 35.0% |
| ! | TATGTTTTCGGAGAAGATGT+AGG | + | chr4.2:81060723-81060742 | MS.gene81790:CDS | 35.0% |
| ! | TCTAGGTTGAGGTTCTATAT+AGG | + | chr4.2:81059901-81059920 | MS.gene81790:intron | 35.0% |
| ! | TTGAGACTTTTTGTGTACCT+CGG | - | chr4.2:81062586-81062605 | None:intergenic | 35.0% |
| ! | TTTTAGTCCACCATTTGGTA+TGG | - | chr4.2:81060043-81060062 | None:intergenic | 35.0% |
| !! | AGGTTTGTTGGTAAAACAAG+AGG | - | chr4.2:81061185-81061204 | None:intergenic | 35.0% |
| !! | CAGACCGATTTGGTAAAAAT+AGG | + | chr4.2:81060781-81060800 | MS.gene81790:CDS | 35.0% |
| AAACACCATACCTTGATACC+AGG | - | chr4.2:81061662-81061681 | None:intergenic | 40.0% | |
| AATGAACATTCTCCAGAACC+TGG | + | chr4.2:81060998-81061017 | MS.gene81790:intron | 40.0% | |
| ACGATAAAGCCACTGAAACA+AGG | - | chr4.2:81062511-81062530 | None:intergenic | 40.0% | |
| ACTCTCATAGTCGTAAAAGG+AGG | - | chr4.2:81059458-81059477 | None:intergenic | 40.0% | |
| ACTTCCATTGTTCAGAAGGA+TGG | + | chr4.2:81059002-81059021 | MS.gene81790:CDS | 40.0% | |
| AGCTCATCAATGGACAAACA+CGG | + | chr4.2:81060397-81060416 | MS.gene81790:intron | 40.0% | |
| AGTTGAACACCTAAAAACCG+TGG | - | chr4.2:81063013-81063032 | None:intergenic | 40.0% | |
| ATCCCACGGTTGGAATATTA+TGG | - | chr4.2:81059779-81059798 | None:intergenic | 40.0% | |
| ATGTTCCTGGTATCAAGGTA+TGG | + | chr4.2:81061654-81061673 | MS.gene81790:intron | 40.0% | |
| ATTGCAAACAGAGAACACGT+AGG | + | chr4.2:81060904-81060923 | MS.gene81790:intron | 40.0% | |
| CAATCAACCATACCAAATGG+TGG | + | chr4.2:81060033-81060052 | MS.gene81790:intron | 40.0% | |
| CAGTGAATGCCACAATTAGA+CGG | + | chr4.2:81060308-81060327 | MS.gene81790:intron | 40.0% | |
| CGGTTAATTACATCCTGTGA+TGG | + | chr4.2:81062910-81062929 | MS.gene81790:intron | 40.0% | |
| CTAGTGGCACACTGTAATTA+AGG | + | chr4.2:81060331-81060350 | MS.gene81790:intron | 40.0% | |
| CTCTCATAGTCGTAAAAGGA+GGG | - | chr4.2:81059457-81059476 | None:intergenic | 40.0% | |
| CTGGTCGTCATACAAAGTTT+GGG | - | chr4.2:81060069-81060088 | None:intergenic | 40.0% | |
| CTTATTCAGGTGATTCGAGA+AGG | + | chr4.2:81062672-81062691 | MS.gene81790:intron | 40.0% | |
| GAAATGAATGAAACTCACCG+AGG | - | chr4.2:81059107-81059126 | None:intergenic | 40.0% | |
| GAAGTCCAAAGGAAGCAAAA+GGG | + | chr4.2:81062336-81062355 | MS.gene81790:CDS | 40.0% | |
| GATTGGTAAAGAGCAAGGAT+GGG | + | chr4.2:81062190-81062209 | MS.gene81790:intron | 40.0% | |
| GCAGTGCACACAATTCTTTA+AGG | - | chr4.2:81062442-81062461 | None:intergenic | 40.0% | |
| GCCTAGAAATATGGTCTAAG+TGG | - | chr4.2:81060232-81060251 | None:intergenic | 40.0% | |
| GGAAGCGATATTACACTTGT+TGG | + | chr4.2:81062693-81062712 | MS.gene81790:CDS | 40.0% | |
| GGCACCTTTCAGACTAAAAA+GGG | - | chr4.2:81059758-81059777 | None:intergenic | 40.0% | |
| GGGAGCTCAATTGTCTATAA+TGG | + | chr4.2:81062719-81062738 | MS.gene81790:CDS | 40.0% | |
| GGTCAACACAAATGCTAAGA+TGG | - | chr4.2:81060155-81060174 | None:intergenic | 40.0% | |
| GTATTGAACCGACATCAATC+AGG | - | chr4.2:81059483-81059502 | None:intergenic | 40.0% | |
| GTCAACTTCCATTGTTCAGA+AGG | + | chr4.2:81058998-81059017 | MS.gene81790:CDS | 40.0% | |
| GTCACTCTCATAGTCGTAAA+AGG | - | chr4.2:81059461-81059480 | None:intergenic | 40.0% | |
| GTGGTCTATGAATACGTAGT+TGG | + | chr4.2:81062018-81062037 | MS.gene81790:intron | 40.0% | |
| GTGTGAAGAGATTGGGAAAA+TGG | + | chr4.2:81058949-81058968 | MS.gene81790:CDS | 40.0% | |
| GTTATACTAGGTGAGTGCTA+AGG | + | chr4.2:81059324-81059343 | MS.gene81790:intron | 40.0% | |
| TCACCATGTGTGAAGAGATT+GGG | + | chr4.2:81058942-81058961 | MS.gene81790:CDS | 40.0% | |
| TCACTGTGTTGTGGTTAAGA+GGG | - | chr4.2:81060273-81060292 | None:intergenic | 40.0% | |
| TCAGGCATGCTCTCTTTATA+AGG | + | chr4.2:81061333-81061352 | MS.gene81790:intron | 40.0% | |
| TCCACAGTTTCTTTATCCCA+AGG | - | chr4.2:81063240-81063259 | None:intergenic | 40.0% | |
| TCCTTGGGATAAAGAAACTG+TGG | + | chr4.2:81063236-81063255 | MS.gene81790:CDS | 40.0% | |
| TCTGGTCGTCATACAAAGTT+TGG | - | chr4.2:81060070-81060089 | None:intergenic | 40.0% | |
| TCTTAACCACAACACAGTGA+AGG | + | chr4.2:81060273-81060292 | MS.gene81790:intron | 40.0% | |
| TGCCATAATATTCCAACCGT+GGG | + | chr4.2:81059774-81059793 | MS.gene81790:intron | 40.0% | |
| TGGCACCTTTCAGACTAAAA+AGG | - | chr4.2:81059759-81059778 | None:intergenic | 40.0% | |
| TGGGATCACAGAAAAGTTGA+GGG | + | chr4.2:81059793-81059812 | MS.gene81790:intron | 40.0% | |
| TTCACTGTGTTGTGGTTAAG+AGG | - | chr4.2:81060274-81060293 | None:intergenic | 40.0% | |
| TTCCGGTAGCAACTTTGTAT+TGG | - | chr4.2:81060365-81060384 | None:intergenic | 40.0% | |
| TTGGGATAAAGAAACTGTGG+AGG | + | chr4.2:81063239-81063258 | MS.gene81790:CDS | 40.0% | |
| TTTCCCAATCTCTTCACACA+TGG | - | chr4.2:81058948-81058967 | None:intergenic | 40.0% | |
| TTTGTATGACGACCAGAATG+CGG | + | chr4.2:81060073-81060092 | MS.gene81790:intron | 40.0% | |
| ! | AACATTCTTGAGGCATTTGC+GGG | - | chr4.2:81062293-81062312 | None:intergenic | 40.0% |
| ! | AATGGGTTTCTTTGGCTTCA+AGG | + | chr4.2:81058967-81058986 | MS.gene81790:CDS | 40.0% |
| ! | CATCGCAGTGCTTATGTTTT+CGG | + | chr4.2:81060711-81060730 | MS.gene81790:intron | 40.0% |
| ! | CATGTGATTCCTTGTTTCAG+TGG | + | chr4.2:81062499-81062518 | MS.gene81790:intron | 40.0% |
| ! | GCGATATTACACTTGTTGGA+TGG | + | chr4.2:81062697-81062716 | MS.gene81790:CDS | 40.0% |
| ! | GTGGTAGTGCTTATAAAGCT+TGG | - | chr4.2:81060213-81060232 | None:intergenic | 40.0% |
| ! | TCAACTTTTCTGTGATCCCA+CGG | - | chr4.2:81059793-81059812 | None:intergenic | 40.0% |
| !! | GTTTCAGTGGCTTTATCGTT+TGG | + | chr4.2:81062512-81062531 | MS.gene81790:intron | 40.0% |
| !! | TAGGGGCACTTCAATTAAGT+CGG | + | chr4.2:81060108-81060127 | MS.gene81790:intron | 40.0% |
| !! | TGTGCCCTTTTTAGTCTGAA+AGG | + | chr4.2:81059751-81059770 | MS.gene81790:intron | 40.0% |
| !!! | TTTTAAGTACTGGTCCACAG+TGG | - | chr4.2:81059391-81059410 | None:intergenic | 40.0% |
| ACATGACAGAAGAAAGCCTC+AGG | - | chr4.2:81061638-81061657 | None:intergenic | 45.0% | |
| ACCCTCTGGTACTTCTTCAA+CGG | - | chr4.2:81062538-81062557 | None:intergenic | 45.0% | |
| AGCACCATCCTTCTGAACAA+TGG | - | chr4.2:81059009-81059028 | None:intergenic | 45.0% | |
| ATACTAGGTGAGTGCTAAGG+TGG | + | chr4.2:81059327-81059346 | MS.gene81790:intron | 45.0% | |
| CCTTCAAAAGTGGTCTATCG+TGG | - | chr4.2:81059651-81059670 | None:intergenic | 45.0% | |
| CGAAGTCCAAAGGAAGCAAA+AGG | + | chr4.2:81062335-81062354 | MS.gene81790:CDS | 45.0% | |
| CTCAACATCAAACCAGGTTC+TGG | - | chr4.2:81061013-81061032 | None:intergenic | 45.0% | |
| CTGCTAATCCAGTTGTGCAA+CGG | - | chr4.2:81060764-81060783 | None:intergenic | 45.0% | |
| CTGTCATGTTCCTGGTATCA+AGG | + | chr4.2:81061649-81061668 | MS.gene81790:CDS | 45.0% | |
| GAGAGTGACCTGATTGATGT+CGG | + | chr4.2:81059472-81059491 | MS.gene81790:intron | 45.0% | |
| GATTTCAGCACCAAAACCTC+CGG | - | chr4.2:81063401-81063420 | None:intergenic | 45.0% | |
| GCACTGCGATGAAATGCAAA+AGG | - | chr4.2:81060702-81060721 | None:intergenic | 45.0% | |
| GCTAAGTTTAGATACCGGAG+TGG | + | chr4.2:81061431-81061450 | MS.gene81790:CDS | 45.0% | |
| GCTTTCTTCTGTCATGTTCC+TGG | + | chr4.2:81061641-81061660 | MS.gene81790:CDS | 45.0% | |
| GGATCACAGAAAAGTTGAGG+GGG | + | chr4.2:81059795-81059814 | MS.gene81790:intron | 45.0% | |
| GGGATCACAGAAAAGTTGAG+GGG | + | chr4.2:81059794-81059813 | MS.gene81790:intron | 45.0% | |
| GTAGATCAGTCATGAAGCTC+CGG | + | chr4.2:81063372-81063391 | MS.gene81790:intron | 45.0% | |
| GTCACCATGTGTGAAGAGAT+TGG | + | chr4.2:81058941-81058960 | MS.gene81790:CDS | 45.0% | |
| GTGCCATAATATTCCAACCG+TGG | + | chr4.2:81059773-81059792 | MS.gene81790:intron | 45.0% | |
| GTGGCACACTGTAATTAAGG+TGG | + | chr4.2:81060334-81060353 | MS.gene81790:intron | 45.0% | |
| GTGGGATCACAGAAAAGTTG+AGG | + | chr4.2:81059792-81059811 | MS.gene81790:intron | 45.0% | |
| TATAAGGGACGCGGTTATCT+AGG | + | chr4.2:81059884-81059903 | MS.gene81790:intron | 45.0% | |
| TCAAATACCTGCTCACAGAG+AGG | - | chr4.2:81060819-81060838 | None:intergenic | 45.0% | |
| TCTTGAACGCTGCTTCTCAA+GGG | + | chr4.2:81063432-81063451 | MS.gene81790:CDS | 45.0% | |
| TGAGAAGCAGCGTTCAAGAA+TGG | - | chr4.2:81063431-81063450 | None:intergenic | 45.0% | |
| TGCGAACTGGATTTCTGCTA+TGG | - | chr4.2:81061290-81061309 | None:intergenic | 45.0% | |
| TTACCACTCTCAATCTCCTG+AGG | + | chr4.2:81061619-81061638 | MS.gene81790:CDS | 45.0% | |
| TTCAGAGTCACAGACACTTC+AGG | - | chr4.2:81060490-81060509 | None:intergenic | 45.0% | |
| TTCGGAGAAGATGTAGGCTT+TGG | + | chr4.2:81060729-81060748 | MS.gene81790:CDS | 45.0% | |
| TTCTTGAACGCTGCTTCTCA+AGG | + | chr4.2:81063431-81063450 | MS.gene81790:CDS | 45.0% | |
| TTGCTTCCTTTGGACTTCGA+GGG | - | chr4.2:81062334-81062353 | None:intergenic | 45.0% | |
| TTGTGTTAGAACAGCAACCC+TGG | + | chr4.2:81060859-81060878 | MS.gene81790:intron | 45.0% | |
| TTTGCTTCCTTTGGACTTCG+AGG | - | chr4.2:81062335-81062354 | None:intergenic | 45.0% | |
| ! | ACATTCTTGAGGCATTTGCG+GGG | - | chr4.2:81062292-81062311 | None:intergenic | 45.0% |
| ! | CACAAAGGTGTAGAGACTTC+AGG | - | chr4.2:81059963-81059982 | None:intergenic | 45.0% |
| ! | CGTCATCAACCACGGTTTTT+AGG | + | chr4.2:81063001-81063020 | MS.gene81790:intron | 45.0% |
| ! | GAGGCATCAGTGAAAAAGAC+AGG | + | chr4.2:81063258-81063277 | MS.gene81790:CDS | 45.0% |
| ! | GGATTGGTAAAGAGCAAGGA+TGG | + | chr4.2:81062189-81062208 | MS.gene81790:intron | 45.0% |
| ! | GGTTTCTTTGGCTTCAAGGA+GGG | + | chr4.2:81058971-81058990 | MS.gene81790:CDS | 45.0% |
| ! | GTTTCTTTGGCTTCAAGGAG+GGG | + | chr4.2:81058972-81058991 | MS.gene81790:CDS | 45.0% |
| ! | TGGAATTGGTCTAGCAGCTA+TGG | + | chr4.2:81061133-81061152 | MS.gene81790:CDS | 45.0% |
| ! | TTGCTTTGGACACTGATCCT+CGG | + | chr4.2:81059087-81059106 | MS.gene81790:CDS | 45.0% |
| !! | ACTGGATTAGCAGACCGATT+TGG | + | chr4.2:81060771-81060790 | MS.gene81790:CDS | 45.0% |
| !! | CCACGATAGACCACTTTTGA+AGG | + | chr4.2:81059648-81059667 | MS.gene81790:intron | 45.0% |
| !! | GGCAGTTTTAGTCCACCATT+TGG | - | chr4.2:81060048-81060067 | None:intergenic | 45.0% |
| !! | GGTATCGTTGGCTTTGGAAT+TGG | + | chr4.2:81061119-81061138 | MS.gene81790:CDS | 45.0% |
| !!! | TATAAATATTTAAACTTTTA+AGG | + | chr4.2:81061797-81061816 | MS.gene81790:intron | 5.0% |
| AACGCTGCTTCTCAAGGGTA+TGG | + | chr4.2:81063437-81063456 | MS.gene81790:CDS | 50.0% | |
| AAGCCTCAGGAGATTGAGAG+TGG | - | chr4.2:81061625-81061644 | None:intergenic | 50.0% | |
| AATGCGGCAATTAGGTGGCT+AGG | + | chr4.2:81060089-81060108 | MS.gene81790:intron | 50.0% | |
| ACCAGAATGCGGCAATTAGG+TGG | + | chr4.2:81060084-81060103 | MS.gene81790:intron | 50.0% | |
| ACGACCAGAATGCGGCAATT+AGG | + | chr4.2:81060081-81060100 | MS.gene81790:intron | 50.0% | |
| ACGGGTTTCTATAAGGGACG+CGG | + | chr4.2:81059875-81059894 | MS.gene81790:intron | 50.0% | |
| AGAACCCCTTATGGAGCTGT+TGG | + | chr4.2:81061584-81061603 | MS.gene81790:CDS | 50.0% | |
| AGGAAGATCAGGGCTCTGTT+TGG | + | chr4.2:81061866-81061885 | MS.gene81790:intron | 50.0% | |
| AGGTGGACCACCTTTGTAAG+TGG | + | chr4.2:81059344-81059363 | MS.gene81790:intron | 50.0% | |
| ATGCGGCAATTAGGTGGCTA+GGG | + | chr4.2:81060090-81060109 | MS.gene81790:intron | 50.0% | |
| ATGGCCAACAGCTCCATAAG+GGG | - | chr4.2:81061591-81061610 | None:intergenic | 50.0% | |
| CAATACTCCTCTCTGTGAGC+AGG | + | chr4.2:81060809-81060828 | MS.gene81790:CDS | 50.0% | |
| CAGTGGACCACTTACATCCA+CGG | - | chr4.2:81059374-81059393 | None:intergenic | 50.0% | |
| CATGGCCAACAGCTCCATAA+GGG | - | chr4.2:81061592-81061611 | None:intergenic | 50.0% | |
| CCAACACCTTCACTGTGTTG+TGG | - | chr4.2:81060282-81060301 | None:intergenic | 50.0% | |
| CTGTGTTGTGGTTAAGAGGG+TGG | - | chr4.2:81060270-81060289 | None:intergenic | 50.0% | |
| GAGCATGCCTGATCAAAAGC+AGG | - | chr4.2:81061325-81061344 | None:intergenic | 50.0% | |
| GCAAACAGAGAACACGTAGG+AGG | + | chr4.2:81060907-81060926 | MS.gene81790:intron | 50.0% | |
| GCAGCTATGGTGAGTCTAAG+AGG | + | chr4.2:81061146-81061165 | MS.gene81790:intron | 50.0% | |
| GCTATCTCGTCGCGACATTA+AGG | + | chr4.2:81059158-81059177 | MS.gene81790:intron | 50.0% | |
| GGCAACATGTAATCACCCTC+TGG | - | chr4.2:81062552-81062571 | None:intergenic | 50.0% | |
| TGCCACAATTAGACGGCTAG+TGG | + | chr4.2:81060315-81060334 | MS.gene81790:intron | 50.0% | |
| TGCCACTAGCCGTCTAATTG+TGG | - | chr4.2:81060320-81060339 | None:intergenic | 50.0% | |
| TGGATGTAAGTGGTCCACTG+TGG | + | chr4.2:81059374-81059393 | MS.gene81790:intron | 50.0% | |
| TGTACCTCGGCCTCAGATAA+AGG | - | chr4.2:81062573-81062592 | None:intergenic | 50.0% | |
| ! | ACGCTGCTTCTCAAGGGTAT+GGG | + | chr4.2:81063438-81063457 | MS.gene81790:CDS | 50.0% |
| ! | CCACAACACAGTGAAGGTGT+TGG | + | chr4.2:81060279-81060298 | MS.gene81790:intron | 50.0% |
| ! | CTTTTCTGTGATCCCACGGT+TGG | - | chr4.2:81059789-81059808 | None:intergenic | 50.0% |
| ! | GAGAGTGGTAATGTCCACCA+TGG | - | chr4.2:81061610-81061629 | None:intergenic | 50.0% |
| ! | GGAGAAGATGTAGGCTTTGG+TGG | + | chr4.2:81060732-81060751 | MS.gene81790:CDS | 50.0% |
| ! | GGGTTTCTTTGGCTTCAAGG+AGG | + | chr4.2:81058970-81058989 | MS.gene81790:CDS | 50.0% |
| !! | AAGGATGGTGCTGCTGAGAA+TGG | + | chr4.2:81059017-81059036 | MS.gene81790:CDS | 50.0% |
| !! | GCCGTTGAAGAAGTACCAGA+GGG | + | chr4.2:81062534-81062553 | MS.gene81790:CDS | 50.0% |
| AGTCATGAAGCTCCGGTGAC+CGG | + | chr4.2:81063379-81063398 | MS.gene81790:CDS | 55.0% | |
| CCACGGTGGACCACTTACAA+AGG | - | chr4.2:81059357-81059376 | None:intergenic | 55.0% | |
| CCATGGCCAACAGCTCCATA+AGG | - | chr4.2:81061593-81061612 | None:intergenic | 55.0% | |
| CCTTATGGAGCTGTTGGCCA+TGG | + | chr4.2:81061590-81061609 | MS.gene81790:CDS | 55.0% | |
| CCTTTGTAAGTGGTCCACCG+TGG | + | chr4.2:81059354-81059373 | MS.gene81790:intron | 55.0% | |
| CGGTGGACCACTTACAAAGG+TGG | - | chr4.2:81059354-81059373 | None:intergenic | 55.0% | |
| CGTCATCCCTCGAAGTCCAA+AGG | + | chr4.2:81062325-81062344 | MS.gene81790:CDS | 55.0% | |
| GCCACCTAATTGCCGCATTC+TGG | - | chr4.2:81060088-81060107 | None:intergenic | 55.0% | |
| GGACGCGGTTATCTAGGTTG+AGG | + | chr4.2:81059890-81059909 | MS.gene81790:intron | 55.0% | |
| TATGGAGCTGTTGGCCATGG+TGG | + | chr4.2:81061593-81061612 | MS.gene81790:CDS | 55.0% | |
| TGCGGCAATTAGGTGGCTAG+GGG | + | chr4.2:81060091-81060110 | MS.gene81790:intron | 55.0% | |
| TGGACCACTTACATCCACGG+TGG | - | chr4.2:81059371-81059390 | None:intergenic | 55.0% | |
| TGGTCCACCGTGGATGTAAG+TGG | + | chr4.2:81059364-81059383 | MS.gene81790:intron | 55.0% | |
| ! | GTTGCCTTTATCTGAGGCCG+AGG | + | chr4.2:81062566-81062585 | MS.gene81790:CDS | 55.0% |
| !! | GGCCGTTGAAGAAGTACCAG+AGG | + | chr4.2:81062533-81062552 | MS.gene81790:CDS | 55.0% |
| !! | TCGCAGGGTATCGTTGGCTT+TGG | + | chr4.2:81061113-81061132 | MS.gene81790:intron | 55.0% |
| !! | TGCTACTCGCAGGGTATCGT+TGG | + | chr4.2:81061107-81061126 | MS.gene81790:intron | 55.0% |
| GCACCAAAACCTCCGGTCAC+CGG | - | chr4.2:81063394-81063413 | None:intergenic | 60.0% | |
| GGCGTGTTCCGTTGCACAAC+TGG | + | chr4.2:81060753-81060772 | MS.gene81790:CDS | 60.0% | |
| CATGAAGCTCCGGTGACCGG+AGG | + | chr4.2:81063382-81063401 | MS.gene81790:CDS | 65.0% | |
| ! | GCTCCGGTGACCGGAGGTTT+TGG | + | chr4.2:81063388-81063407 | MS.gene81790:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 81058939 | 81063489 | 81058939 | ID=MS.gene81790 |
| chr4.2 | mRNA | 81058939 | 81063489 | 81058939 | ID=MS.gene81790.t1;Parent=MS.gene81790 |
| chr4.2 | exon | 81058939 | 81059108 | 81058939 | ID=MS.gene81790.t1.exon1;Parent=MS.gene81790.t1 |
| chr4.2 | CDS | 81058939 | 81059108 | 81058939 | ID=cds.MS.gene81790.t1;Parent=MS.gene81790.t1 |
| chr4.2 | exon | 81060719 | 81060830 | 81060719 | ID=MS.gene81790.t1.exon2;Parent=MS.gene81790.t1 |
| chr4.2 | CDS | 81060719 | 81060830 | 81060719 | ID=cds.MS.gene81790.t1;Parent=MS.gene81790.t1 |
| chr4.2 | exon | 81061119 | 81061154 | 81061119 | ID=MS.gene81790.t1.exon3;Parent=MS.gene81790.t1 |
| chr4.2 | CDS | 81061119 | 81061154 | 81061119 | ID=cds.MS.gene81790.t1;Parent=MS.gene81790.t1 |
| chr4.2 | exon | 81061277 | 81061336 | 81061277 | ID=MS.gene81790.t1.exon4;Parent=MS.gene81790.t1 |
| chr4.2 | CDS | 81061277 | 81061336 | 81061277 | ID=cds.MS.gene81790.t1;Parent=MS.gene81790.t1 |
| chr4.2 | exon | 81061416 | 81061473 | 81061416 | ID=MS.gene81790.t1.exon5;Parent=MS.gene81790.t1 |
| chr4.2 | CDS | 81061416 | 81061473 | 81061416 | ID=cds.MS.gene81790.t1;Parent=MS.gene81790.t1 |
| chr4.2 | exon | 81061573 | 81061670 | 81061573 | ID=MS.gene81790.t1.exon6;Parent=MS.gene81790.t1 |
| chr4.2 | CDS | 81061573 | 81061670 | 81061573 | ID=cds.MS.gene81790.t1;Parent=MS.gene81790.t1 |
| chr4.2 | exon | 81062323 | 81062412 | 81062323 | ID=MS.gene81790.t1.exon7;Parent=MS.gene81790.t1 |
| chr4.2 | CDS | 81062323 | 81062412 | 81062323 | ID=cds.MS.gene81790.t1;Parent=MS.gene81790.t1 |
| chr4.2 | exon | 81062519 | 81062587 | 81062519 | ID=MS.gene81790.t1.exon8;Parent=MS.gene81790.t1 |
| chr4.2 | CDS | 81062519 | 81062587 | 81062519 | ID=cds.MS.gene81790.t1;Parent=MS.gene81790.t1 |
| chr4.2 | exon | 81062681 | 81062767 | 81062681 | ID=MS.gene81790.t1.exon9;Parent=MS.gene81790.t1 |
| chr4.2 | CDS | 81062681 | 81062767 | 81062681 | ID=cds.MS.gene81790.t1;Parent=MS.gene81790.t1 |
| chr4.2 | exon | 81063195 | 81063290 | 81063195 | ID=MS.gene81790.t1.exon10;Parent=MS.gene81790.t1 |
| chr4.2 | CDS | 81063195 | 81063290 | 81063195 | ID=cds.MS.gene81790.t1;Parent=MS.gene81790.t1 |
| chr4.2 | exon | 81063376 | 81063489 | 81063376 | ID=MS.gene81790.t1.exon11;Parent=MS.gene81790.t1 |
| chr4.2 | CDS | 81063376 | 81063489 | 81063376 | ID=cds.MS.gene81790.t1;Parent=MS.gene81790.t1 |
| Gene Sequence |
| Protein sequence |
