Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073516.t1 | XP_003604926.1 | 98.3 | 358 | 6 | 0 | 1 | 358 | 1 | 358 | 4.00E-205 | 723.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073516.t1 | Q9SAV3 | 94.1 | 323 | 19 | 0 | 36 | 358 | 30 | 352 | 1.8e-182 | 639.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073516.t1 | G7JTF7 | 98.3 | 358 | 6 | 0 | 1 | 358 | 1 | 358 | 2.9e-205 | 723.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene34923 | MS.gene073516 | PPI |
| MS.gene035365 | MS.gene073516 | PPI |
| MS.gene073516 | MS.gene08312 | PPI |
| MS.gene000331 | MS.gene073516 | PPI |
| MS.gene073516 | MS.gene28855 | PPI |
| MS.gene073516 | MS.gene050322 | PPI |
| MS.gene000681 | MS.gene073516 | PPI |
| MS.gene022368 | MS.gene073516 | PPI |
| MS.gene073516 | MS.gene007227 | PPI |
| MS.gene97445 | MS.gene073516 | PPI |
| MS.gene54337 | MS.gene073516 | PPI |
| MS.gene041602 | MS.gene073516 | PPI |
| MS.gene70694 | MS.gene073516 | PPI |
| MS.gene023314 | MS.gene073516 | PPI |
| MS.gene041600 | MS.gene073516 | PPI |
| MS.gene066363 | MS.gene073516 | PPI |
| MS.gene035364 | MS.gene073516 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073516.t1 | MTR_4g021470 | 98.324 | 358 | 6 | 0 | 1 | 358 | 1 | 358 | 0.0 | 728 |
| MS.gene073516.t1 | MTR_7g005380 | 36.391 | 327 | 201 | 4 | 33 | 353 | 23 | 348 | 1.93e-68 | 219 |
| MS.gene073516.t1 | MTR_3g076630 | 38.255 | 298 | 181 | 3 | 38 | 334 | 83 | 378 | 3.31e-61 | 202 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073516.t1 | AT1G55510 | 91.124 | 338 | 29 | 1 | 21 | 358 | 16 | 352 | 0.0 | 641 |
| MS.gene073516.t1 | AT3G13450 | 90.634 | 331 | 30 | 1 | 28 | 358 | 29 | 358 | 0.0 | 632 |
| MS.gene073516.t1 | AT5G50850 | 37.730 | 326 | 196 | 4 | 34 | 353 | 32 | 356 | 3.50e-71 | 226 |
| MS.gene073516.t1 | AT1G30120 | 39.677 | 310 | 183 | 4 | 26 | 334 | 75 | 381 | 1.21e-66 | 216 |
| MS.gene073516.t1 | AT2G34590 | 38.369 | 331 | 193 | 5 | 13 | 334 | 53 | 381 | 1.60e-65 | 213 |
Find 89 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAACAAGTCACCTTATTCT+TGG | 0.245214 | 4.1:-76708037 | None:intergenic |
| CTTTACCGCCACAATTAAAT+TGG | 0.260322 | 4.1:-76705268 | None:intergenic |
| ATTGGGAAAATGGGTTTCTT+TGG | 0.265066 | 4.1:+76702829 | MS.gene073516:CDS |
| GCTTTCTTCTGTCATGTTCC+TGG | 0.276789 | 4.1:+76705452 | MS.gene073516:CDS |
| GGGAGCTCAATTGTCTATTA+TGG | 0.283147 | 4.1:+76706536 | MS.gene073516:CDS |
| GTGTGAAGAGATTGGGAAAA+TGG | 0.298675 | 4.1:+76702819 | MS.gene073516:CDS |
| GGTACCTCAGCTTCAGATAA+AGG | 0.302451 | 4.1:-76706387 | None:intergenic |
| TTAACAATTAGAACCCCTTA+TGG | 0.304867 | 4.1:+76705386 | MS.gene073516:CDS |
| GCTCCGGTGACCGGAGGATT+TGG | 0.323075 | 4.1:+76707202 | MS.gene073516:CDS |
| CTTGATTAATAGCAGAATAA+AGG | 0.338144 | 4.1:-76702925 | None:intergenic |
| ATTCTTGGTTGGCATGTAGA+AGG | 0.340328 | 4.1:-76708022 | None:intergenic |
| CTACATGCCAACCAAGAATA+AGG | 0.342880 | 4.1:+76708026 | MS.gene073516:CDS |
| GGTGTGTTCCGTTGCACAAC+TGG | 0.365452 | 4.1:+76704602 | MS.gene073516:CDS |
| GGTATCGTTGGCTTTGGAAT+TGG | 0.380330 | 4.1:+76704923 | MS.gene073516:CDS |
| TCAAGCTCTTCATATTGCTT+TGG | 0.381002 | 4.1:+76702943 | MS.gene073516:CDS |
| AATGGGTTTCTTTGGTTTCA+AGG | 0.400338 | 4.1:+76702837 | MS.gene073516:CDS |
| GGAGAAGATGTAGGCTTTGG+TGG | 0.409447 | 4.1:+76704581 | MS.gene073516:CDS |
| GGAAGCGATATTACACTTGT+TGG | 0.415313 | 4.1:+76706510 | MS.gene073516:CDS |
| ATCTGAAGACACTAATTCCT+TGG | 0.418114 | 4.1:+76707040 | MS.gene073516:CDS |
| CAATACTCCTCTTTGTGAGC+AGG | 0.420406 | 4.1:+76704658 | MS.gene073516:CDS |
| CGTTGGCTTTGGAATTGGTC+TGG | 0.421778 | 4.1:+76704928 | MS.gene073516:CDS |
| TCACAGGGTATCGTTGGCTT+TGG | 0.421915 | 4.1:+76704917 | MS.gene073516:intron |
| TTTGCTTCCTTTGGACTTCG+AGG | 0.429912 | 4.1:-76706153 | None:intergenic |
| ACTGGATTAGCAGACCGATT+TGG | 0.437170 | 4.1:+76704620 | MS.gene073516:CDS |
| GGTTTCTTTGGTTTCAAGGA+GGG | 0.437943 | 4.1:+76702841 | MS.gene073516:CDS |
| TTTGGAGAAGATGTAGGCTT+TGG | 0.451573 | 4.1:+76704578 | MS.gene073516:CDS |
| TGGAATTGGTCTGGCAGCTA+TGG | 0.452161 | 4.1:+76704937 | MS.gene073516:CDS |
| CATGGCCAACAGCTCCATAA+GGG | 0.452887 | 4.1:-76705400 | None:intergenic |
| CGAAGTCCAAAGGAAGCAAA+AGG | 0.458646 | 4.1:+76706156 | MS.gene073516:CDS |
| GTTTCTTTGGTTTCAAGGAG+GGG | 0.462827 | 4.1:+76702842 | MS.gene073516:CDS |
| AGACCACAAACTCTTGCTAC+AGG | 0.470899 | 4.1:-76707970 | None:intergenic |
| TGTGAAGAGATTGGGAAAAT+GGG | 0.471202 | 4.1:+76702820 | MS.gene073516:CDS |
| TTCTTGAACGCTGCTTCTCA+AGG | 0.473251 | 4.1:+76707245 | MS.gene073516:CDS |
| CCATGGCCAACAGCTCCATA+AGG | 0.473283 | 4.1:-76705401 | None:intergenic |
| CAAGTCACCTTATTCTTGGT+TGG | 0.475955 | 4.1:-76708033 | None:intergenic |
| TTGCTTCCTTTGGACTTCGA+GGG | 0.478535 | 4.1:-76706152 | None:intergenic |
| GTCAACTTCCATTGTTCAGA+AGG | 0.479003 | 4.1:+76702868 | MS.gene073516:CDS |
| GTCACCATGTGTGAAGAGAT+TGG | 0.482522 | 4.1:+76702811 | MS.gene073516:CDS |
| TGCTACTCACAGGGTATCGT+TGG | 0.484434 | 4.1:+76704911 | MS.gene073516:intron |
| GCCCCTGTAGCAAGAGTTTG+TGG | 0.487322 | 4.1:+76707967 | MS.gene073516:CDS |
| CGATATTACACTTGTTGGAT+GGG | 0.488766 | 4.1:+76706515 | MS.gene073516:CDS |
| TTCTTGGTTGGCATGTAGAA+GGG | 0.493347 | 4.1:-76708021 | None:intergenic |
| GCGATATTACACTTGTTGGA+TGG | 0.493378 | 4.1:+76706514 | MS.gene073516:CDS |
| AGTCATGAAGCTCCGGTGAC+CGG | 0.504899 | 4.1:+76707193 | MS.gene073516:CDS |
| TGAGAAGCAGCGTTCAAGAA+TGG | 0.508954 | 4.1:-76707242 | None:intergenic |
| AAGGATGCTGCTGCTGAGAA+TGG | 0.512633 | 4.1:+76702887 | MS.gene073516:CDS |
| TCTGAAGACACTAATTCCTT+GGG | 0.514920 | 4.1:+76707041 | MS.gene073516:CDS |
| TGCAAACTGGATTTCAGCTA+TGG | 0.519711 | 4.1:-76705095 | None:intergenic |
| TCCACAGTTTCTTTATCCCA+AGG | 0.519849 | 4.1:-76707057 | None:intergenic |
| GCACCAAATCCTCCGGTCAC+CGG | 0.522916 | 4.1:-76707205 | None:intergenic |
| GGTTCGAAAACAAGAGGAAA+AGG | 0.524926 | 4.1:-76708000 | None:intergenic |
| AGAACCCCTTATGGAGCTGT+TGG | 0.527687 | 4.1:+76705395 | MS.gene073516:CDS |
| TCACCATGTGTGAAGAGATT+GGG | 0.530158 | 4.1:+76702812 | MS.gene073516:CDS |
| ACATGACAGAAGAAAGCCTC+AGG | 0.547527 | 4.1:-76705446 | None:intergenic |
| CCTTATGGAGCTGTTGGCCA+TGG | 0.547588 | 4.1:+76705401 | MS.gene073516:CDS |
| TATGGAGCTGTTGGCCATGG+TGG | 0.555046 | 4.1:+76705404 | MS.gene073516:CDS |
| GAGCATGCCTGATCAAAAGC+AGG | 0.557132 | 4.1:-76705130 | None:intergenic |
| GACCACAAACTCTTGCTACA+GGG | 0.562598 | 4.1:-76707969 | None:intergenic |
| TTTGGCCGTTGAAGAAGTAC+CGG | 0.563379 | 4.1:+76706347 | MS.gene073516:CDS |
| GGCAACATGTAATCATCCTC+CGG | 0.568936 | 4.1:-76706366 | None:intergenic |
| TTGCTTTGGACACTGATCCT+CGG | 0.570770 | 4.1:+76702957 | MS.gene073516:CDS |
| GTAGATTAGTCATGAAGCTC+CGG | 0.571967 | 4.1:+76707186 | MS.gene073516:intron |
| AGCGGAAACCAATTTAATTG+TGG | 0.572917 | 4.1:+76705260 | MS.gene073516:CDS |
| GATTTCAGCACCAAATCCTC+CGG | 0.578711 | 4.1:-76707212 | None:intergenic |
| ATCCTCCGGTACTTCTTCAA+CGG | 0.580188 | 4.1:-76706352 | None:intergenic |
| CTGCTAATCCAGTTGTGCAA+CGG | 0.596759 | 4.1:-76704610 | None:intergenic |
| TCTTGAACGCTGCTTCTCAA+GGG | 0.599173 | 4.1:+76707246 | MS.gene073516:CDS |
| TTTCCCAATCTCTTCACACA+TGG | 0.603446 | 4.1:-76702815 | None:intergenic |
| CTCACGCAGGTGATTCGAGA+AGG | 0.604024 | 4.1:+76706489 | MS.gene073516:intron |
| GAAGTCCAAAGGAAGCAAAA+GGG | 0.605180 | 4.1:+76706157 | MS.gene073516:CDS |
| GGGTTTCTTTGGTTTCAAGG+AGG | 0.605317 | 4.1:+76702840 | MS.gene073516:CDS |
| AGCAGCATCCTTCTGAACAA+TGG | 0.609794 | 4.1:-76702876 | None:intergenic |
| TAGAAGGGTTCGAAAACAAG+AGG | 0.611384 | 4.1:-76708006 | None:intergenic |
| ACCACAAACTCTTGCTACAG+GGG | 0.612361 | 4.1:-76707968 | None:intergenic |
| GGAAACCAATTTAATTGTGG+CGG | 0.612450 | 4.1:+76705263 | MS.gene073516:CDS |
| TCATATACCTGCTCACAAAG+AGG | 0.612626 | 4.1:-76704665 | None:intergenic |
| AAACACCATACTTTGATACC+AGG | 0.615715 | 4.1:-76705470 | None:intergenic |
| GATATTACACTTGTTGGATG+GGG | 0.617699 | 4.1:+76706516 | MS.gene073516:CDS |
| TGTCATCCCTCGAAGTCCAA+AGG | 0.623687 | 4.1:+76706146 | MS.gene073516:CDS |
| AAGCCTCAGGAGATTGAGAG+TGG | 0.639692 | 4.1:-76705433 | None:intergenic |
| GGCCGTTGAAGAAGTACCGG+AGG | 0.639786 | 4.1:+76706350 | MS.gene073516:CDS |
| CATGAAGCTCCGGTGACCGG+AGG | 0.641182 | 4.1:+76707196 | MS.gene073516:CDS |
| GTTGCCTTTATCTGAAGCTG+AGG | 0.646371 | 4.1:+76706383 | MS.gene073516:CDS |
| TCCTTGGGATAAAGAAACTG+TGG | 0.648165 | 4.1:+76707056 | MS.gene073516:CDS |
| ATGGCCAACAGCTCCATAAG+GGG | 0.659107 | 4.1:-76705399 | None:intergenic |
| TTACCACTCTCAATCTCCTG+AGG | 0.681438 | 4.1:+76705430 | MS.gene073516:CDS |
| TTGGGATAAAGAAACTGTGG+AGG | 0.692494 | 4.1:+76707059 | MS.gene073516:CDS |
| GCTAAGTTTAGATATCGAAG+CGG | 0.693198 | 4.1:+76705242 | MS.gene073516:CDS |
| GAGAGTGGTAATGTCCACCA+TGG | 0.697263 | 4.1:-76705418 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAATTGTTTAAACTTTTA+AGG | + | chr4.1:76705610-76705629 | MS.gene073516:intron | 10.0% |
| !! | AAAATTTAAGTCTTAGAATT+TGG | + | chr4.1:76703868-76703887 | MS.gene073516:intron | 15.0% |
| !! | AAATTTAAGTCTTAGAATTT+GGG | + | chr4.1:76703869-76703888 | MS.gene073516:intron | 15.0% |
| !! | ATTGATAAATTTGAAGATAA+TGG | - | chr4.1:76704431-76704450 | None:intergenic | 15.0% |
| !! | TTTATATATCAGAATTTAAG+AGG | + | chr4.1:76705038-76705057 | MS.gene073516:intron | 15.0% |
| !!! | AATTTTTGAAATTACTGATT+AGG | - | chr4.1:76704881-76704900 | None:intergenic | 15.0% |
| !!! | ATTTGATAATTATAAATCTG+TGG | + | chr4.1:76707572-76707591 | MS.gene073516:intron | 15.0% |
| !!! | TTTTAAAATGTTTTACACAA+AGG | - | chr4.1:76703852-76703871 | None:intergenic | 15.0% |
| !! | AATATATTACTATAGTTGAG+AGG | + | chr4.1:76706920-76706939 | MS.gene073516:intron | 20.0% |
| !! | AATTTCGTAATAAAGGTTAA+TGG | - | chr4.1:76703456-76703475 | None:intergenic | 20.0% |
| !! | ACTTCAAGTAAAAATTCTTT+AGG | + | chr4.1:76707293-76707312 | MS.gene073516:intron | 20.0% |
| !! | ATAACAGACATATTCTTATA+TGG | - | chr4.1:76703548-76703567 | None:intergenic | 20.0% |
| !! | ATGAAAATTAAAAACACACA+AGG | + | chr4.1:76704754-76704773 | MS.gene073516:intron | 20.0% |
| !! | ATGTTATTGTTACAAAACTT+AGG | + | chr4.1:76703566-76703585 | MS.gene073516:intron | 20.0% |
| !! | CTTCAAGTAAAAATTCTTTA+GGG | + | chr4.1:76707294-76707313 | MS.gene073516:intron | 20.0% |
| !! | GGTACTATTATTAATTAAAG+TGG | - | chr4.1:76707885-76707904 | None:intergenic | 20.0% |
| !! | GTAATGTTACTAATATGATA+TGG | - | chr4.1:76705906-76705925 | None:intergenic | 20.0% |
| !! | TAAATTCATCTTTACCAATT+TGG | + | chr4.1:76707720-76707739 | MS.gene073516:intron | 20.0% |
| !! | TCATATATTACACTTCTTAA+TGG | + | chr4.1:76704268-76704287 | MS.gene073516:intron | 20.0% |
| !! | TTTATATAACAAATGGAATG+CGG | + | chr4.1:76703950-76703969 | MS.gene073516:intron | 20.0% |
| !!! | AATCTCGTAAATAATTTTGA+TGG | + | chr4.1:76706687-76706706 | MS.gene073516:intron | 20.0% |
| !!! | ATGTCTTTTATATTAGGAAT+AGG | - | chr4.1:76707908-76707927 | None:intergenic | 20.0% |
| !!! | ATGTGTTTTATTTTTTTCAG+TGG | + | chr4.1:76706316-76706335 | MS.gene073516:intron | 20.0% |
| !!! | ATTGTGTTTCTTCTTTTTAT+TGG | + | chr4.1:76704815-76704834 | MS.gene073516:intron | 20.0% |
| !!! | ATTTTATTACGAAATTTTGC+AGG | + | chr4.1:76706993-76707012 | MS.gene073516:intron | 20.0% |
| !!! | TAAGCTTTATGTTTAGATTA+GGG | + | chr4.1:76703743-76703762 | MS.gene073516:intron | 20.0% |
| !!! | TGTCTTTTATATTAGGAATA+GGG | - | chr4.1:76707907-76707926 | None:intergenic | 20.0% |
| !!! | TTAAGCTTTATGTTTAGATT+AGG | + | chr4.1:76703742-76703761 | MS.gene073516:intron | 20.0% |
| !!! | TTATTTACAACCTCATTTTT+TGG | + | chr4.1:76705512-76705531 | MS.gene073516:intron | 20.0% |
| !!! | TTCATTTCTTTTTCTTTATC+AGG | + | chr4.1:76702989-76703008 | MS.gene073516:intron | 20.0% |
| ! | AAAACTTAGACCATATTTCT+AGG | + | chr4.1:76704076-76704095 | MS.gene073516:intron | 25.0% |
| ! | AAATGCAAAAGGAGAATATA+AGG | - | chr4.1:76704540-76704559 | None:intergenic | 25.0% |
| ! | AACTATAGTAATATATTCCC+AGG | - | chr4.1:76706917-76706936 | None:intergenic | 25.0% |
| ! | AATTACATCTAGTACTAAGT+TGG | + | chr4.1:76706039-76706058 | MS.gene073516:intron | 25.0% |
| ! | ACTATAGTAATATATTCCCA+GGG | - | chr4.1:76706916-76706935 | None:intergenic | 25.0% |
| ! | CTTGATTAATAGCAGAATAA+AGG | - | chr4.1:76702928-76702947 | None:intergenic | 25.0% |
| ! | GAATATAAGAATTCAACCTT+TGG | - | chr4.1:76706231-76706250 | None:intergenic | 25.0% |
| ! | GATACTTATATTGGCAAATT+TGG | - | chr4.1:76704507-76704526 | None:intergenic | 25.0% |
| ! | GATCTATAAATTTGACGTAA+CGG | - | chr4.1:76705321-76705340 | None:intergenic | 25.0% |
| ! | TAGATTAGGGGATTATATTA+GGG | + | chr4.1:76703756-76703775 | MS.gene073516:intron | 25.0% |
| ! | TCAAATAAGCGATACTTATA+AGG | - | chr4.1:76704482-76704501 | None:intergenic | 25.0% |
| ! | TCAGTTCTCATAAATCTTAA+AGG | - | chr4.1:76705969-76705988 | None:intergenic | 25.0% |
| ! | TCATCGAAATTTCGTAATAA+AGG | - | chr4.1:76703463-76703482 | None:intergenic | 25.0% |
| ! | TCGAAAAATACATTAGGATT+CGG | - | chr4.1:76706207-76706226 | None:intergenic | 25.0% |
| ! | TGGTTAATTATATCTTGTGA+TGG | + | chr4.1:76706729-76706748 | MS.gene073516:intron | 25.0% |
| ! | TGTGATACAAAACAAAACTT+AGG | + | chr4.1:76703124-76703143 | MS.gene073516:intron | 25.0% |
| ! | TTAGATTAGGGGATTATATT+AGG | + | chr4.1:76703755-76703774 | MS.gene073516:intron | 25.0% |
| ! | TTCAGGTGTTTAAATATACA+TGG | + | chr4.1:76706837-76706856 | MS.gene073516:intron | 25.0% |
| ! | TTGATACCATCTTAGAATTT+GGG | + | chr4.1:76704035-76704054 | MS.gene073516:intron | 25.0% |
| ! | TTGGCTATTCAAATAGATAT+TGG | - | chr4.1:76707520-76707539 | None:intergenic | 25.0% |
| ! | TTTGACAAACATAAAGTAGA+AGG | - | chr4.1:76703720-76703739 | None:intergenic | 25.0% |
| ! | TTTGATACCATCTTAGAATT+TGG | + | chr4.1:76704034-76704053 | MS.gene073516:intron | 25.0% |
| !! | AAGCTTTATGTTTAGATTAG+GGG | + | chr4.1:76703744-76703763 | MS.gene073516:intron | 25.0% |
| !! | GTCTTTTATATTAGGAATAG+GGG | - | chr4.1:76707906-76707925 | None:intergenic | 25.0% |
| !! | TATATATTTGAGTTCATCAG+TGG | + | chr4.1:76704227-76704246 | MS.gene073516:intron | 25.0% |
| !! | TCAGACATGTCTTTTATATT+AGG | - | chr4.1:76707914-76707933 | None:intergenic | 25.0% |
| !! | TTTGGTTCGAAAAATACATT+AGG | - | chr4.1:76706213-76706232 | None:intergenic | 25.0% |
| !!! | AAACCCTATTTTTACCAAAT+CGG | - | chr4.1:76704637-76704656 | None:intergenic | 25.0% |
| !!! | AAACTTTTTCACATTCTTGT+AGG | + | chr4.1:76705362-76705381 | MS.gene073516:intron | 25.0% |
| !!! | AACAAAAGTACCAAAAAATG+AGG | - | chr4.1:76705525-76705544 | None:intergenic | 25.0% |
| !!! | AATTTTGAAGTATTGATCCA+CGG | + | chr4.1:76703501-76703520 | MS.gene073516:intron | 25.0% |
| !!! | ATATGGTCTAAGTTTTAGAA+TGG | - | chr4.1:76704072-76704091 | None:intergenic | 25.0% |
| !!! | CCATTTGTTATATAAAGCTT+GGG | - | chr4.1:76703946-76703965 | None:intergenic | 25.0% |
| !!! | CTGTTTTGAATTGTTATACT+AGG | + | chr4.1:76703182-76703201 | MS.gene073516:intron | 25.0% |
| !!! | TAATGTATTTTTCGAACCAA+AGG | + | chr4.1:76706212-76706231 | MS.gene073516:CDS | 25.0% |
| !!! | TCAAGCAATTTGAGATTTTT+TGG | - | chr4.1:76707468-76707487 | None:intergenic | 25.0% |
| !!! | TCCATTTGTTATATAAAGCT+TGG | - | chr4.1:76703947-76703966 | None:intergenic | 25.0% |
| !!! | TTTGTGGTAATTTTAAGTAC+TGG | - | chr4.1:76703271-76703290 | None:intergenic | 25.0% |
| AAATGAGACCGTATCTTTAT+GGG | - | chr4.1:76707628-76707647 | None:intergenic | 30.0% | |
| AATAGCTTGATCATCAAAGT+AGG | + | chr4.1:76705659-76705678 | MS.gene073516:intron | 30.0% | |
| AGCCAAATATATTGACATGA+TGG | + | chr4.1:76707534-76707553 | MS.gene073516:intron | 30.0% | |
| ATCATCAAAGTAGGAATATC+AGG | + | chr4.1:76705668-76705687 | MS.gene073516:intron | 30.0% | |
| ATGCTGTCACAGATTTATAA+CGG | - | chr4.1:76707418-76707437 | None:intergenic | 30.0% | |
| ATTGCAAATGACACAGTAAA+GGG | - | chr4.1:76703602-76703621 | None:intergenic | 30.0% | |
| CAAACTGCAATTACAAATTG+TGG | - | chr4.1:76706873-76706892 | None:intergenic | 30.0% | |
| CTATACCAAAAACATTCTTG+AGG | - | chr4.1:76706124-76706143 | None:intergenic | 30.0% | |
| GAAAAATGTAATCTGCAAAC+TGG | - | chr4.1:76705111-76705130 | None:intergenic | 30.0% | |
| GAACTCAAATATATAGCTTC+CGG | - | chr4.1:76704222-76704241 | None:intergenic | 30.0% | |
| GATTATATCAGATTGCAGTA+AGG | - | chr4.1:76705009-76705028 | None:intergenic | 30.0% | |
| GCCAAATATATTGACATGAT+GGG | + | chr4.1:76707535-76707554 | MS.gene073516:intron | 30.0% | |
| GGTACGAGTAAAATAACAAT+CGG | + | chr4.1:76707857-76707876 | MS.gene073516:intron | 30.0% | |
| GTTAATGCAGTTCAAATACA+TGG | + | chr4.1:76706709-76706728 | MS.gene073516:intron | 30.0% | |
| TAAATGAGACCGTATCTTTA+TGG | - | chr4.1:76707629-76707648 | None:intergenic | 30.0% | |
| TCATCAAAGTAGGAATATCA+GGG | + | chr4.1:76705669-76705688 | MS.gene073516:intron | 30.0% | |
| TCATTTGATCATGCAGATAT+TGG | + | chr4.1:76708127-76708146 | MS.gene073516:intron | 30.0% | |
| TCCCATCATGTCAATATATT+TGG | - | chr4.1:76707539-76707558 | None:intergenic | 30.0% | |
| TCTTGTATTTATATGCTGCA+TGG | + | chr4.1:76708072-76708091 | MS.gene073516:intron | 30.0% | |
| TGAAGTTATGAGCTAAAAGT+TGG | - | chr4.1:76707279-76707298 | None:intergenic | 30.0% | |
| TGAGATCACAGAAAAGTTTA+GGG | + | chr4.1:76703663-76703682 | MS.gene073516:intron | 30.0% | |
| TGTACAGAGGATACTTATAT+TGG | - | chr4.1:76704516-76704535 | None:intergenic | 30.0% | |
| TTAACAATTAGAACCCCTTA+TGG | + | chr4.1:76705386-76705405 | MS.gene073516:CDS | 30.0% | |
| TTAAGTCTTAGAATTTGGGT+TGG | + | chr4.1:76703873-76703892 | MS.gene073516:intron | 30.0% | |
| TTCATTGCAGACTCATTTAA+GGG | - | chr4.1:76704123-76704142 | None:intergenic | 30.0% | |
| TTGTAAGCAGCTTAATCATT+TGG | - | chr4.1:76705563-76705582 | None:intergenic | 30.0% | |
| TTGTGTTAGTAAAACAACTC+TGG | + | chr4.1:76704708-76704727 | MS.gene073516:intron | 30.0% | |
| TTTACCAATTTGGAAAAGCA+AGG | + | chr4.1:76707730-76707749 | MS.gene073516:intron | 30.0% | |
| ! | AAATGCCTCAAGAATGTTTT+TGG | + | chr4.1:76706116-76706135 | MS.gene073516:intron | 30.0% |
| ! | ATATGGATTACCTTCAAAAG+TGG | - | chr4.1:76703531-76703550 | None:intergenic | 30.0% |
| ! | ATGCTCTCTTTATAAGGTTT+TGG | + | chr4.1:76705147-76705166 | MS.gene073516:intron | 30.0% |
| ! | CAAAGTATGGTGTTTTCATT+TGG | + | chr4.1:76705478-76705497 | MS.gene073516:intron | 30.0% |
| ! | CCCAAGCTTTATATAACAAA+TGG | + | chr4.1:76703943-76703962 | MS.gene073516:intron | 30.0% |
| ! | TAAACTTTTCTGTGATCTCA+CGG | - | chr4.1:76703663-76703682 | None:intergenic | 30.0% |
| ! | TACAATTTTTCCATTTCCCT+GGG | + | chr4.1:76706897-76706916 | MS.gene073516:intron | 30.0% |
| ! | TATTACGAAATTTTGCAGGA+GGG | + | chr4.1:76706997-76707016 | MS.gene073516:intron | 30.0% |
| ! | TTAAAGCTGAATTTCTAGAG+AGG | + | chr4.1:76704011-76704030 | MS.gene073516:intron | 30.0% |
| ! | TTACAATTTTTCCATTTCCC+TGG | + | chr4.1:76706896-76706915 | MS.gene073516:intron | 30.0% |
| ! | TTAGGGCATAGTTTATGTTT+TGG | + | chr4.1:76707311-76707330 | MS.gene073516:intron | 30.0% |
| ! | TTATTACGAAATTTTGCAGG+AGG | + | chr4.1:76706996-76707015 | MS.gene073516:intron | 30.0% |
| !! | AGACCGATTTGGTAAAAATA+GGG | + | chr4.1:76704631-76704650 | MS.gene073516:CDS | 30.0% |
| !! | GAGTTGTTTTACTAACACAA+AGG | - | chr4.1:76704708-76704727 | None:intergenic | 30.0% |
| !! | TCAATCGTCTTTAGAATTTG+TGG | - | chr4.1:76703287-76703306 | None:intergenic | 30.0% |
| !!! | ACTCTGAGATTTTTTTAACG+AGG | - | chr4.1:76704790-76704809 | None:intergenic | 30.0% |
| !!! | CTAAGTTTTAGAATGGAGTT+AGG | - | chr4.1:76704065-76704084 | None:intergenic | 30.0% |
| !!! | CTCAAGAATGTTTTTGGTAT+AGG | + | chr4.1:76706122-76706141 | MS.gene073516:intron | 30.0% |
| !!! | CTCTTTATAAGGTTTTGGTT+AGG | + | chr4.1:76705152-76705171 | MS.gene073516:intron | 30.0% |
| !!! | TATGTTTTTGGAGAAGATGT+AGG | + | chr4.1:76704572-76704591 | MS.gene073516:CDS | 30.0% |
| AAACACCATACTTTGATACC+AGG | - | chr4.1:76705473-76705492 | None:intergenic | 35.0% | |
| ACATTGAATTGCTACTCACA+GGG | + | chr4.1:76704902-76704921 | MS.gene073516:intron | 35.0% | |
| ACGAAATTTCGATGACTAGT+TGG | + | chr4.1:76703468-76703487 | MS.gene073516:intron | 35.0% | |
| ACTTTCTGATTCAAAGCAAC+AGG | - | chr4.1:76706595-76706614 | None:intergenic | 35.0% | |
| AGATCACAGAAAAGTTTAGG+GGG | + | chr4.1:76703665-76703684 | MS.gene073516:intron | 35.0% | |
| AGCGGAAACCAATTTAATTG+TGG | + | chr4.1:76705260-76705279 | MS.gene073516:CDS | 35.0% | |
| AGGTGGAATTTCCAATACAA+AGG | + | chr4.1:76704190-76704209 | MS.gene073516:intron | 35.0% | |
| ATCCATGTCTAGAAATCTAG+AGG | + | chr4.1:76706948-76706967 | MS.gene073516:intron | 35.0% | |
| ATCTGAAGACACTAATTCCT+TGG | + | chr4.1:76707040-76707059 | MS.gene073516:CDS | 35.0% | |
| ATGTTCCTGGTATCAAAGTA+TGG | + | chr4.1:76705465-76705484 | MS.gene073516:intron | 35.0% | |
| ATTAATGAGTTGCAACACCT+TGG | - | chr4.1:76706767-76706786 | None:intergenic | 35.0% | |
| ATTTAAACACCTGAAAACCG+TGG | - | chr4.1:76706832-76706851 | None:intergenic | 35.0% | |
| ATTTATGAGAACTGAGATGC+TGG | + | chr4.1:76705974-76705993 | MS.gene073516:intron | 35.0% | |
| CAAACAAGTCACCTTATTCT+TGG | - | chr4.1:76708040-76708059 | None:intergenic | 35.0% | |
| CATTGCAAATGACACAGTAA+AGG | - | chr4.1:76703603-76703622 | None:intergenic | 35.0% | |
| CTCAAATTGCTTGAGAATTG+AGG | + | chr4.1:76707474-76707493 | MS.gene073516:intron | 35.0% | |
| CTTAAATGAGTCTGCAATGA+AGG | + | chr4.1:76704122-76704141 | MS.gene073516:intron | 35.0% | |
| CTTCATTGCAGACTCATTTA+AGG | - | chr4.1:76704124-76704143 | None:intergenic | 35.0% | |
| CTTTACCGCCACAATTAAAT+TGG | - | chr4.1:76705271-76705290 | None:intergenic | 35.0% | |
| GAGAATATAAGGATGTACAG+AGG | - | chr4.1:76704529-76704548 | None:intergenic | 35.0% | |
| GAGATCACAGAAAAGTTTAG+GGG | + | chr4.1:76703664-76703683 | MS.gene073516:intron | 35.0% | |
| GATGGTTAATGAATATGCCA+AGG | + | chr4.1:76706747-76706766 | MS.gene073516:intron | 35.0% | |
| GCTAAGTTTAGATATCGAAG+CGG | + | chr4.1:76705242-76705261 | MS.gene073516:CDS | 35.0% | |
| GGAAACCAATTTAATTGTGG+CGG | + | chr4.1:76705263-76705282 | MS.gene073516:CDS | 35.0% | |
| GTAATATATTCCCAGGGAAA+TGG | - | chr4.1:76706910-76706929 | None:intergenic | 35.0% | |
| GTCACCTTTCAGACTAAAAA+GGG | - | chr4.1:76703628-76703647 | None:intergenic | 35.0% | |
| GTGAGATCACAGAAAAGTTT+AGG | + | chr4.1:76703662-76703681 | MS.gene073516:intron | 35.0% | |
| TAGAATGAATACCGAAACCT+GGG | + | chr4.1:76707127-76707146 | MS.gene073516:intron | 35.0% | |
| TCAAGCTCTTCATATTGCTT+TGG | + | chr4.1:76702943-76702962 | MS.gene073516:CDS | 35.0% | |
| TCATTGCAGACTCATTTAAG+GGG | - | chr4.1:76704122-76704141 | None:intergenic | 35.0% | |
| TCTCAGTGAAGAAGAAAAAG+AGG | + | chr4.1:76706417-76706436 | MS.gene073516:intron | 35.0% | |
| TCTGAAGACACTAATTCCTT+GGG | + | chr4.1:76707041-76707060 | MS.gene073516:CDS | 35.0% | |
| TCTGAATCGTAAAAATGACG+AGG | + | chr4.1:76703429-76703448 | MS.gene073516:intron | 35.0% | |
| TGTCACCTTTCAGACTAAAA+AGG | - | chr4.1:76703629-76703648 | None:intergenic | 35.0% | |
| TGTGAAGAGATTGGGAAAAT+GGG | + | chr4.1:76702820-76702839 | MS.gene073516:CDS | 35.0% | |
| TTAGAATGAATACCGAAACC+TGG | + | chr4.1:76707126-76707145 | MS.gene073516:intron | 35.0% | |
| TTGCAAATGACACAGTAAAG+GGG | - | chr4.1:76703601-76703620 | None:intergenic | 35.0% | |
| TTTATGAGAACTGAGATGCT+GGG | + | chr4.1:76705975-76705994 | MS.gene073516:intron | 35.0% | |
| ! | AAACATTCTTGAGGCATTTG+CGG | - | chr4.1:76706115-76706134 | None:intergenic | 35.0% |
| ! | AATAACCCTTTTGCTTCCTT+TGG | - | chr4.1:76706165-76706184 | None:intergenic | 35.0% |
| ! | AATGGGTTTCTTTGGTTTCA+AGG | + | chr4.1:76702837-76702856 | MS.gene073516:CDS | 35.0% |
| ! | ACGTAGTTGGAAGATTTTGA+AGG | + | chr4.1:76705845-76705864 | MS.gene073516:intron | 35.0% |
| ! | ATATTGACATGATGGGAGTT+AGG | + | chr4.1:76707542-76707561 | MS.gene073516:intron | 35.0% |
| ! | ATTGGGAAAATGGGTTTCTT+TGG | + | chr4.1:76702829-76702848 | MS.gene073516:CDS | 35.0% |
| ! | ATTTTGAACGTCATCAACCA+CGG | + | chr4.1:76706812-76706831 | MS.gene073516:intron | 35.0% |
| ! | CGATATTACACTTGTTGGAT+GGG | + | chr4.1:76706515-76706534 | MS.gene073516:CDS | 35.0% |
| ! | CTCACATTGATTGAGAATCA+AGG | + | chr4.1:76707347-76707366 | MS.gene073516:intron | 35.0% |
| ! | CTTCTTCACTGAGACTTTTT+GGG | - | chr4.1:76706411-76706430 | None:intergenic | 35.0% |
| ! | GATATTACACTTGTTGGATG+GGG | + | chr4.1:76706516-76706535 | MS.gene073516:CDS | 35.0% |
| ! | GCTTATATGTTTTCATGGCA+GGG | + | chr4.1:76705064-76705083 | MS.gene073516:intron | 35.0% |
| ! | TCTTCTTCACTGAGACTTTT+TGG | - | chr4.1:76706412-76706431 | None:intergenic | 35.0% |
| ! | TGCTTATATGTTTTCATGGC+AGG | + | chr4.1:76705063-76705082 | MS.gene073516:intron | 35.0% |
| !! | CAGACCGATTTGGTAAAAAT+AGG | + | chr4.1:76704630-76704649 | MS.gene073516:CDS | 35.0% |
| !! | CATTTTTCCTGCTTTTGATC+AGG | + | chr4.1:76705123-76705142 | MS.gene073516:CDS | 35.0% |
| !! | GGCTTGCTTATATGTTTTCA+TGG | + | chr4.1:76705059-76705078 | MS.gene073516:intron | 35.0% |
| !! | TCTTCCTTGCTTTTCCAAAT+TGG | - | chr4.1:76707737-76707756 | None:intergenic | 35.0% |
| !!! | TTTTCAGTGGCTTTATCGTT+TGG | + | chr4.1:76706329-76706348 | MS.gene073516:intron | 35.0% |
| ACAAATGGAATGCGGCAATT+AGG | + | chr4.1:76703958-76703977 | MS.gene073516:intron | 40.0% | |
| ACAGATTTATAACGGCACCT+CGG | - | chr4.1:76707410-76707429 | None:intergenic | 40.0% | |
| ACCACTGAACTGACACATAA+TGG | - | chr4.1:76707840-76707859 | None:intergenic | 40.0% | |
| ACCATTATGTGTCAGTTCAG+TGG | + | chr4.1:76707836-76707855 | MS.gene073516:intron | 40.0% | |
| ACTCTCATAGTCGTAAAAGG+AGG | - | chr4.1:76703328-76703347 | None:intergenic | 40.0% | |
| AGGGGATTATATTAGGGATG+TGG | + | chr4.1:76703762-76703781 | MS.gene073516:intron | 40.0% | |
| ATGTAAGTTAATACCGACCC+AGG | - | chr4.1:76707147-76707166 | None:intergenic | 40.0% | |
| ATTCTTGGTTGGCATGTAGA+AGG | - | chr4.1:76708025-76708044 | None:intergenic | 40.0% | |
| CAAGTCACCTTATTCTTGGT+TGG | - | chr4.1:76708036-76708055 | None:intergenic | 40.0% | |
| CAGATTGCAGTAAGGTTTGT+CGG | - | chr4.1:76705001-76705020 | None:intergenic | 40.0% | |
| CAGCATACACAAAACCCAAA+CGG | + | chr4.1:76707432-76707451 | MS.gene073516:intron | 40.0% | |
| CATTGCAGACTCATTTAAGG+GGG | - | chr4.1:76704121-76704140 | None:intergenic | 40.0% | |
| CCATACAAAACCGCCTTATA+AGG | + | chr4.1:76703911-76703930 | MS.gene073516:intron | 40.0% | |
| CTACATGCCAACCAAGAATA+AGG | + | chr4.1:76708026-76708045 | MS.gene073516:CDS | 40.0% | |
| CTCTAACTGTGTCACAAAAG+AGG | - | chr4.1:76707947-76707966 | None:intergenic | 40.0% | |
| CTCTCATAGTCGTAAAAGGA+GGG | - | chr4.1:76703327-76703346 | None:intergenic | 40.0% | |
| GAAATGAATGAAACTCACCG+AGG | - | chr4.1:76702977-76702996 | None:intergenic | 40.0% | |
| GAAGTCCAAAGGAAGCAAAA+GGG | + | chr4.1:76706157-76706176 | MS.gene073516:CDS | 40.0% | |
| GACATTGAATTGCTACTCAC+AGG | + | chr4.1:76704901-76704920 | MS.gene073516:intron | 40.0% | |
| GATGACTTCGAATTAGCAAG+TGG | + | chr4.1:76705813-76705832 | MS.gene073516:intron | 40.0% | |
| GGAAGCGATATTACACTTGT+TGG | + | chr4.1:76706510-76706529 | MS.gene073516:CDS | 40.0% | |
| GGGAGCTCAATTGTCTATTA+TGG | + | chr4.1:76706536-76706555 | MS.gene073516:CDS | 40.0% | |
| GGTTCGAAAACAAGAGGAAA+AGG | - | chr4.1:76708003-76708022 | None:intergenic | 40.0% | |
| GTATTGAACCGACATCAATC+AGG | - | chr4.1:76703353-76703372 | None:intergenic | 40.0% | |
| GTCAACTTCCATTGTTCAGA+AGG | + | chr4.1:76702868-76702887 | MS.gene073516:CDS | 40.0% | |
| GTCACTCTCATAGTCGTAAA+AGG | - | chr4.1:76703331-76703350 | None:intergenic | 40.0% | |
| GTGGTCTATGAATACGTAGT+TGG | + | chr4.1:76705832-76705851 | MS.gene073516:intron | 40.0% | |
| GTGTCACAAAAGAGGAAAAC+AGG | - | chr4.1:76707939-76707958 | None:intergenic | 40.0% | |
| GTGTGAAGAGATTGGGAAAA+TGG | + | chr4.1:76702819-76702838 | MS.gene073516:CDS | 40.0% | |
| GTTATACTAGGTGAGTGCTA+AGG | + | chr4.1:76703194-76703213 | MS.gene073516:intron | 40.0% | |
| TAGAAGGGTTCGAAAACAAG+AGG | - | chr4.1:76708009-76708028 | None:intergenic | 40.0% | |
| TCACCATGTGTGAAGAGATT+GGG | + | chr4.1:76702812-76702831 | MS.gene073516:CDS | 40.0% | |
| TCAGGCATGCTCTCTTTATA+AGG | + | chr4.1:76705141-76705160 | MS.gene073516:intron | 40.0% | |
| TCATATACCTGCTCACAAAG+AGG | - | chr4.1:76704668-76704687 | None:intergenic | 40.0% | |
| TCCAATACAAAGGTTGCAAC+CGG | + | chr4.1:76704200-76704219 | MS.gene073516:intron | 40.0% | |
| TCCACAGTTTCTTTATCCCA+AGG | - | chr4.1:76707060-76707079 | None:intergenic | 40.0% | |
| TCCTTGGGATAAAGAAACTG+TGG | + | chr4.1:76707056-76707075 | MS.gene073516:CDS | 40.0% | |
| TGCAAACTGGATTTCAGCTA+TGG | - | chr4.1:76705098-76705117 | None:intergenic | 40.0% | |
| TTATTACTCTGTACTCACGC+AGG | + | chr4.1:76706476-76706495 | MS.gene073516:intron | 40.0% | |
| TTCTTGGTTGGCATGTAGAA+GGG | - | chr4.1:76708024-76708043 | None:intergenic | 40.0% | |
| TTGGGATAAAGAAACTGTGG+AGG | + | chr4.1:76707059-76707078 | MS.gene073516:CDS | 40.0% | |
| TTTCCCAATCTCTTCACACA+TGG | - | chr4.1:76702818-76702837 | None:intergenic | 40.0% | |
| TTTGGAGAAGATGTAGGCTT+TGG | + | chr4.1:76704578-76704597 | MS.gene073516:CDS | 40.0% | |
| ! | ACAAAGGTGTGTTGAGACTT+TGG | - | chr4.1:76703836-76703855 | None:intergenic | 40.0% |
| ! | CATCGCAGTGCTTATGTTTT+TGG | + | chr4.1:76704560-76704579 | MS.gene073516:intron | 40.0% |
| ! | CTCATTTGTTAGAGTAGACG+TGG | - | chr4.1:76707667-76707686 | None:intergenic | 40.0% |
| ! | CTCTTTTGTGACACAGTTAG+AGG | + | chr4.1:76707945-76707964 | MS.gene073516:intron | 40.0% |
| ! | GACCTCTAGATTTCTAGACA+TGG | - | chr4.1:76706953-76706972 | None:intergenic | 40.0% |
| ! | GAGGCATCAGTAAAAAAGAC+AGG | + | chr4.1:76707078-76707097 | MS.gene073516:CDS | 40.0% |
| ! | GCGATATTACACTTGTTGGA+TGG | + | chr4.1:76706514-76706533 | MS.gene073516:CDS | 40.0% |
| ! | GGTCAACCCAAATTCTAAGA+TGG | - | chr4.1:76704044-76704063 | None:intergenic | 40.0% |
| ! | GGTTTCTTTGGTTTCAAGGA+GGG | + | chr4.1:76702841-76702860 | MS.gene073516:CDS | 40.0% |
| ! | GTAGATTAGTCATGAAGCTC+CGG | + | chr4.1:76707186-76707205 | MS.gene073516:intron | 40.0% |
| ! | GTTTCTTTGGTTTCAAGGAG+GGG | + | chr4.1:76702842-76702861 | MS.gene073516:CDS | 40.0% |
| ! | TTTGTATGGCTGGTTGAGTT+AGG | - | chr4.1:76703900-76703919 | None:intergenic | 40.0% |
| !! | ACCATATTTCTAGGCGTAGA+GGG | + | chr4.1:76704085-76704104 | MS.gene073516:intron | 40.0% |
| !! | CCTTATAAGGCGGTTTTGTA+TGG | - | chr4.1:76703914-76703933 | None:intergenic | 40.0% |
| !! | TGTGCCCTTTTTAGTCTGAA+AGG | + | chr4.1:76703621-76703640 | MS.gene073516:intron | 40.0% |
| !!! | TTTTAAGTACTGGTCCACAG+TGG | - | chr4.1:76703261-76703280 | None:intergenic | 40.0% |
| AATGGAATGCGGCAATTAGG+TGG | + | chr4.1:76703961-76703980 | MS.gene073516:intron | 45.0% | |
| ACACAAAACCCAAACGGTTC+TGG | + | chr4.1:76707438-76707457 | MS.gene073516:intron | 45.0% | |
| ACATGACAGAAGAAAGCCTC+AGG | - | chr4.1:76705449-76705468 | None:intergenic | 45.0% | |
| ACCACAAACTCTTGCTACAG+GGG | - | chr4.1:76707971-76707990 | None:intergenic | 45.0% | |
| ACCCATATGCCGCAATTAGA+CGG | + | chr4.1:76704147-76704166 | MS.gene073516:intron | 45.0% | |
| AGACCACAAACTCTTGCTAC+AGG | - | chr4.1:76707973-76707992 | None:intergenic | 45.0% | |
| AGCAGCATCCTTCTGAACAA+TGG | - | chr4.1:76702879-76702898 | None:intergenic | 45.0% | |
| AGGAATATCAGGGCTCTGTT+TGG | + | chr4.1:76705679-76705698 | MS.gene073516:intron | 45.0% | |
| ATACTAGGTGAGTGCTAAGG+TGG | + | chr4.1:76703197-76703216 | MS.gene073516:intron | 45.0% | |
| ATCCTCCGGTACTTCTTCAA+CGG | - | chr4.1:76706355-76706374 | None:intergenic | 45.0% | |
| ATGAATACCGAAACCTGGGT+CGG | + | chr4.1:76707131-76707150 | MS.gene073516:intron | 45.0% | |
| ATTAGGAGTGGTAGAGAGCA+AGG | + | chr4.1:76706008-76706027 | MS.gene073516:intron | 45.0% | |
| CAATACTCCTCTTTGTGAGC+AGG | + | chr4.1:76704658-76704677 | MS.gene073516:CDS | 45.0% | |
| CGAAGTCCAAAGGAAGCAAA+AGG | + | chr4.1:76706156-76706175 | MS.gene073516:CDS | 45.0% | |
| CTGCTAATCCAGTTGTGCAA+CGG | - | chr4.1:76704613-76704632 | None:intergenic | 45.0% | |
| GACCACAAACTCTTGCTACA+GGG | - | chr4.1:76707972-76707991 | None:intergenic | 45.0% | |
| GAGAGTGACCTGATTGATGT+CGG | + | chr4.1:76703342-76703361 | MS.gene073516:intron | 45.0% | |
| GATTTCAGCACCAAATCCTC+CGG | - | chr4.1:76707215-76707234 | None:intergenic | 45.0% | |
| GCACACGACCCATAAAGATA+CGG | + | chr4.1:76707617-76707636 | MS.gene073516:intron | 45.0% | |
| GCACTGCGATGAAATGCAAA+AGG | - | chr4.1:76704551-76704570 | None:intergenic | 45.0% | |
| GCAGTCTTCACCTTATAAGG+CGG | - | chr4.1:76703924-76703943 | None:intergenic | 45.0% | |
| GCTTTCTTCTGTCATGTTCC+TGG | + | chr4.1:76705452-76705471 | MS.gene073516:CDS | 45.0% | |
| GGCAACATGTAATCATCCTC+CGG | - | chr4.1:76706369-76706388 | None:intergenic | 45.0% | |
| GGTAACGAGAGAATTAGGAG+TGG | + | chr4.1:76705996-76706015 | MS.gene073516:intron | 45.0% | |
| GGTACCTCAGCTTCAGATAA+AGG | - | chr4.1:76706390-76706409 | None:intergenic | 45.0% | |
| GTCACCATGTGTGAAGAGAT+TGG | + | chr4.1:76702811-76702830 | MS.gene073516:CDS | 45.0% | |
| GTTAATACCGACCCAGGTTT+CGG | - | chr4.1:76707141-76707160 | None:intergenic | 45.0% | |
| TCCCTCTACGCCTAGAAATA+TGG | - | chr4.1:76704089-76704108 | None:intergenic | 45.0% | |
| TCCGGTTGCAACCTTTGTAT+TGG | - | chr4.1:76704204-76704223 | None:intergenic | 45.0% | |
| TCTTGAACGCTGCTTCTCAA+GGG | + | chr4.1:76707246-76707265 | MS.gene073516:CDS | 45.0% | |
| TGAGAAGCAGCGTTCAAGAA+TGG | - | chr4.1:76707245-76707264 | None:intergenic | 45.0% | |
| TGCTGGGTAACGAGAGAATT+AGG | + | chr4.1:76705991-76706010 | MS.gene073516:intron | 45.0% | |
| TGGGCAGTCTTCACCTTATA+AGG | - | chr4.1:76703927-76703946 | None:intergenic | 45.0% | |
| TTACCACTCTCAATCTCCTG+AGG | + | chr4.1:76705430-76705449 | MS.gene073516:CDS | 45.0% | |
| TTCTTGAACGCTGCTTCTCA+AGG | + | chr4.1:76707245-76707264 | MS.gene073516:CDS | 45.0% | |
| TTGCTTCCTTTGGACTTCGA+GGG | - | chr4.1:76706155-76706174 | None:intergenic | 45.0% | |
| TTGGTGTACCAGAACCGTTT+GGG | - | chr4.1:76707449-76707468 | None:intergenic | 45.0% | |
| TTTGCTTCCTTTGGACTTCG+AGG | - | chr4.1:76706156-76706175 | None:intergenic | 45.0% | |
| ! | CTTTTCTGTGATCTCACGGT+TGG | - | chr4.1:76703659-76703678 | None:intergenic | 45.0% |
| ! | GGGTTTCTTTGGTTTCAAGG+AGG | + | chr4.1:76702840-76702859 | MS.gene073516:CDS | 45.0% |
| ! | GTTGCCTTTATCTGAAGCTG+AGG | + | chr4.1:76706383-76706402 | MS.gene073516:CDS | 45.0% |
| ! | TTGCTTTGGACACTGATCCT+CGG | + | chr4.1:76702957-76702976 | MS.gene073516:CDS | 45.0% |
| ! | TTTGGCCGTTGAAGAAGTAC+CGG | + | chr4.1:76706347-76706366 | MS.gene073516:CDS | 45.0% |
| ! | TTTGGTGTACCAGAACCGTT+TGG | - | chr4.1:76707450-76707469 | None:intergenic | 45.0% |
| !! | ACTGGATTAGCAGACCGATT+TGG | + | chr4.1:76704620-76704639 | MS.gene073516:CDS | 45.0% |
| !! | ATAAGGCGGTTTTGTATGGC+TGG | - | chr4.1:76703910-76703929 | None:intergenic | 45.0% |
| !! | GACCATATTTCTAGGCGTAG+AGG | + | chr4.1:76704084-76704103 | MS.gene073516:intron | 45.0% |
| !! | GGTATCGTTGGCTTTGGAAT+TGG | + | chr4.1:76704923-76704942 | MS.gene073516:CDS | 45.0% |
| AAGCCTCAGGAGATTGAGAG+TGG | - | chr4.1:76705436-76705455 | None:intergenic | 50.0% | |
| AAGGATGCTGCTGCTGAGAA+TGG | + | chr4.1:76702887-76702906 | MS.gene073516:CDS | 50.0% | |
| AATGCGGCAATTAGGTGGCT+AGG | + | chr4.1:76703966-76703985 | MS.gene073516:intron | 50.0% | |
| AGAACCCCTTATGGAGCTGT+TGG | + | chr4.1:76705395-76705414 | MS.gene073516:CDS | 50.0% | |
| AGCCGTCTAATTGCGGCATA+TGG | - | chr4.1:76704152-76704171 | None:intergenic | 50.0% | |
| AGGTGGACCACCTTTGTAAG+TGG | + | chr4.1:76703214-76703233 | MS.gene073516:intron | 50.0% | |
| ATGCGGCAATTAGGTGGCTA+GGG | + | chr4.1:76703967-76703986 | MS.gene073516:intron | 50.0% | |
| ATGGCCAACAGCTCCATAAG+GGG | - | chr4.1:76705402-76705421 | None:intergenic | 50.0% | |
| ATTTATAACGGCACCTCGGC+AGG | - | chr4.1:76707406-76707425 | None:intergenic | 50.0% | |
| CAGTGGACCACTTACATCCA+CGG | - | chr4.1:76703244-76703263 | None:intergenic | 50.0% | |
| CATGGCCAACAGCTCCATAA+GGG | - | chr4.1:76705403-76705422 | None:intergenic | 50.0% | |
| CCTTCAAAAGTGGTCTACCG+TGG | - | chr4.1:76703521-76703540 | None:intergenic | 50.0% | |
| CTAGCGGCGCACTGTAATTA+AGG | + | chr4.1:76704170-76704189 | MS.gene073516:intron | 50.0% | |
| GAGCATGCCTGATCAAAAGC+AGG | - | chr4.1:76705133-76705152 | None:intergenic | 50.0% | |
| GCCGTCTAATTGCGGCATAT+GGG | - | chr4.1:76704151-76704170 | None:intergenic | 50.0% | |
| GCTATCTCGTCGCGACATTA+AGG | + | chr4.1:76703028-76703047 | MS.gene073516:intron | 50.0% | |
| TGCAGACTCATTTAAGGGGG+AGG | - | chr4.1:76704118-76704137 | None:intergenic | 50.0% | |
| TGGATGTAAGTGGTCCACTG+TGG | + | chr4.1:76703244-76703263 | MS.gene073516:intron | 50.0% | |
| TGTCATCCCTCGAAGTCCAA+AGG | + | chr4.1:76706146-76706165 | MS.gene073516:CDS | 50.0% | |
| ! | CGTCATCAACCACGGTTTTC+AGG | + | chr4.1:76706820-76706839 | MS.gene073516:intron | 50.0% |
| ! | GAGAGTGGTAATGTCCACCA+TGG | - | chr4.1:76705421-76705440 | None:intergenic | 50.0% |
| ! | GGAGAAGATGTAGGCTTTGG+TGG | + | chr4.1:76704581-76704600 | MS.gene073516:CDS | 50.0% |
| ! | TGGAATTGGTCTGGCAGCTA+TGG | + | chr4.1:76704937-76704956 | MS.gene073516:CDS | 50.0% |
| !! | CCACGGTAGACCACTTTTGA+AGG | + | chr4.1:76703518-76703537 | MS.gene073516:intron | 50.0% |
| !! | CGTTGGCTTTGGAATTGGTC+TGG | + | chr4.1:76704928-76704947 | MS.gene073516:CDS | 50.0% |
| !! | TCACAGGGTATCGTTGGCTT+TGG | + | chr4.1:76704917-76704936 | MS.gene073516:intron | 50.0% |
| !! | TGCTACTCACAGGGTATCGT+TGG | + | chr4.1:76704911-76704930 | MS.gene073516:intron | 50.0% |
| AGTCATGAAGCTCCGGTGAC+CGG | + | chr4.1:76707193-76707212 | MS.gene073516:CDS | 55.0% | |
| CCACGGTGGACCACTTACAA+AGG | - | chr4.1:76703227-76703246 | None:intergenic | 55.0% | |
| CCATGGCCAACAGCTCCATA+AGG | - | chr4.1:76705404-76705423 | None:intergenic | 55.0% | |
| CCTTATGGAGCTGTTGGCCA+TGG | + | chr4.1:76705401-76705420 | MS.gene073516:CDS | 55.0% | |
| CCTTTGTAAGTGGTCCACCG+TGG | + | chr4.1:76703224-76703243 | MS.gene073516:intron | 55.0% | |
| CGGTGGACCACTTACAAAGG+TGG | - | chr4.1:76703224-76703243 | None:intergenic | 55.0% | |
| CTCACGCAGGTGATTCGAGA+AGG | + | chr4.1:76706489-76706508 | MS.gene073516:intron | 55.0% | |
| GCCCCTGTAGCAAGAGTTTG+TGG | + | chr4.1:76707967-76707986 | MS.gene073516:CDS | 55.0% | |
| GCGGCGCACTGTAATTAAGG+TGG | + | chr4.1:76704173-76704192 | MS.gene073516:intron | 55.0% | |
| GGTGTGTTCCGTTGCACAAC+TGG | + | chr4.1:76704602-76704621 | MS.gene073516:CDS | 55.0% | |
| TATGGAGCTGTTGGCCATGG+TGG | + | chr4.1:76705404-76705423 | MS.gene073516:CDS | 55.0% | |
| TGCCGCAATTAGACGGCTAG+CGG | + | chr4.1:76704154-76704173 | MS.gene073516:intron | 55.0% | |
| TGCGGCAATTAGGTGGCTAG+GGG | + | chr4.1:76703968-76703987 | MS.gene073516:intron | 55.0% | |
| TGGACCACTTACATCCACGG+TGG | - | chr4.1:76703241-76703260 | None:intergenic | 55.0% | |
| TGGTCCACCGTGGATGTAAG+TGG | + | chr4.1:76703234-76703253 | MS.gene073516:intron | 55.0% | |
| CGCCGCTAGCCGTCTAATTG+CGG | - | chr4.1:76704159-76704178 | None:intergenic | 60.0% | |
| GCACCAAATCCTCCGGTCAC+CGG | - | chr4.1:76707208-76707227 | None:intergenic | 60.0% | |
| GGCAATTAGGTGGCTAGGGG+CGG | + | chr4.1:76703971-76703990 | MS.gene073516:intron | 60.0% | |
| TCACTGTCCTCAACCTGCCG+AGG | + | chr4.1:76707390-76707409 | MS.gene073516:intron | 60.0% | |
| !! | GGCCGTTGAAGAAGTACCGG+AGG | + | chr4.1:76706350-76706369 | MS.gene073516:CDS | 60.0% |
| AACGGCACCTCGGCAGGTTG+AGG | - | chr4.1:76707400-76707419 | None:intergenic | 65.0% | |
| CATGAAGCTCCGGTGACCGG+AGG | + | chr4.1:76707196-76707215 | MS.gene073516:CDS | 65.0% | |
| GCTCCGGTGACCGGAGGATT+TGG | + | chr4.1:76707202-76707221 | MS.gene073516:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 76702809 | 76708178 | 76702809 | ID=MS.gene073516 |
| chr4.1 | mRNA | 76702809 | 76708178 | 76702809 | ID=MS.gene073516.t1;Parent=MS.gene073516 |
| chr4.1 | exon | 76702809 | 76702978 | 76702809 | ID=MS.gene073516.t1.exon1;Parent=MS.gene073516.t1 |
| chr4.1 | CDS | 76702809 | 76702978 | 76702809 | ID=cds.MS.gene073516.t1;Parent=MS.gene073516.t1 |
| chr4.1 | exon | 76704568 | 76704679 | 76704568 | ID=MS.gene073516.t1.exon2;Parent=MS.gene073516.t1 |
| chr4.1 | CDS | 76704568 | 76704679 | 76704568 | ID=cds.MS.gene073516.t1;Parent=MS.gene073516.t1 |
| chr4.1 | exon | 76704923 | 76704958 | 76704923 | ID=MS.gene073516.t1.exon3;Parent=MS.gene073516.t1 |
| chr4.1 | CDS | 76704923 | 76704958 | 76704923 | ID=cds.MS.gene073516.t1;Parent=MS.gene073516.t1 |
| chr4.1 | exon | 76705085 | 76705144 | 76705085 | ID=MS.gene073516.t1.exon4;Parent=MS.gene073516.t1 |
| chr4.1 | CDS | 76705085 | 76705144 | 76705085 | ID=cds.MS.gene073516.t1;Parent=MS.gene073516.t1 |
| chr4.1 | exon | 76705227 | 76705284 | 76705227 | ID=MS.gene073516.t1.exon5;Parent=MS.gene073516.t1 |
| chr4.1 | CDS | 76705227 | 76705284 | 76705227 | ID=cds.MS.gene073516.t1;Parent=MS.gene073516.t1 |
| chr4.1 | exon | 76705384 | 76705481 | 76705384 | ID=MS.gene073516.t1.exon6;Parent=MS.gene073516.t1 |
| chr4.1 | CDS | 76705384 | 76705481 | 76705384 | ID=cds.MS.gene073516.t1;Parent=MS.gene073516.t1 |
| chr4.1 | exon | 76706144 | 76706233 | 76706144 | ID=MS.gene073516.t1.exon7;Parent=MS.gene073516.t1 |
| chr4.1 | CDS | 76706144 | 76706233 | 76706144 | ID=cds.MS.gene073516.t1;Parent=MS.gene073516.t1 |
| chr4.1 | exon | 76706336 | 76706404 | 76706336 | ID=MS.gene073516.t1.exon8;Parent=MS.gene073516.t1 |
| chr4.1 | CDS | 76706336 | 76706404 | 76706336 | ID=cds.MS.gene073516.t1;Parent=MS.gene073516.t1 |
| chr4.1 | exon | 76706498 | 76706584 | 76706498 | ID=MS.gene073516.t1.exon9;Parent=MS.gene073516.t1 |
| chr4.1 | CDS | 76706498 | 76706584 | 76706498 | ID=cds.MS.gene073516.t1;Parent=MS.gene073516.t1 |
| chr4.1 | exon | 76707015 | 76707110 | 76707015 | ID=MS.gene073516.t1.exon10;Parent=MS.gene073516.t1 |
| chr4.1 | CDS | 76707015 | 76707110 | 76707015 | ID=cds.MS.gene073516.t1;Parent=MS.gene073516.t1 |
| chr4.1 | exon | 76707190 | 76707267 | 76707190 | ID=MS.gene073516.t1.exon11;Parent=MS.gene073516.t1 |
| chr4.1 | CDS | 76707190 | 76707267 | 76707190 | ID=cds.MS.gene073516.t1;Parent=MS.gene073516.t1 |
| chr4.1 | exon | 76707961 | 76708047 | 76707961 | ID=MS.gene073516.t1.exon12;Parent=MS.gene073516.t1 |
| chr4.1 | CDS | 76707961 | 76708047 | 76707961 | ID=cds.MS.gene073516.t1;Parent=MS.gene073516.t1 |
| chr4.1 | exon | 76708143 | 76708178 | 76708143 | ID=MS.gene073516.t1.exon13;Parent=MS.gene073516.t1 |
| chr4.1 | CDS | 76708143 | 76708178 | 76708143 | ID=cds.MS.gene073516.t1;Parent=MS.gene073516.t1 |
| Gene Sequence |
| Protein sequence |
