Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08318.t1 | RHN42374.1 | 96.8 | 443 | 11 | 1 | 27 | 466 | 26 | 468 | 3.30E-228 | 800.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08318.t1 | Q9C918 | 52.3 | 304 | 140 | 3 | 141 | 443 | 8 | 307 | 1.2e-88 | 328.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08318.t1 | A0A396GS89 | 96.8 | 443 | 11 | 1 | 27 | 466 | 26 | 468 | 2.4e-228 | 800.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050119 | MS.gene08318 | 0.907732 | 3.69E-81 | -1.69E-46 |
| MS.gene054559 | MS.gene08318 | 0.805108 | 1.57E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene08318 | 0.804306 | 2.30E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08318.t1 | MTR_0332s0040 | 90.809 | 272 | 21 | 2 | 195 | 466 | 165 | 432 | 1.58e-180 | 512 |
| MS.gene08318.t1 | MTR_1g092460 | 55.556 | 306 | 128 | 3 | 146 | 451 | 134 | 431 | 4.35e-116 | 348 |
| MS.gene08318.t1 | MTR_0274s0030 | 52.649 | 302 | 133 | 3 | 146 | 447 | 71 | 362 | 1.76e-110 | 331 |
| MS.gene08318.t1 | MTR_8g060700 | 53.145 | 318 | 144 | 3 | 121 | 438 | 435 | 747 | 8.19e-107 | 334 |
| MS.gene08318.t1 | MTR_2g079270 | 49.425 | 348 | 144 | 7 | 115 | 439 | 215 | 553 | 8.04e-105 | 325 |
| MS.gene08318.t1 | MTR_7g023760 | 50.530 | 283 | 123 | 3 | 145 | 427 | 47 | 312 | 7.98e-91 | 279 |
| MS.gene08318.t1 | MTR_4g088835 | 57.576 | 231 | 97 | 1 | 158 | 387 | 638 | 868 | 1.64e-90 | 295 |
| MS.gene08318.t1 | MTR_2g013650 | 49.470 | 283 | 127 | 3 | 158 | 436 | 649 | 919 | 4.57e-90 | 293 |
| MS.gene08318.t1 | MTR_1g112730 | 50.179 | 279 | 132 | 4 | 159 | 437 | 828 | 1099 | 1.74e-88 | 292 |
| MS.gene08318.t1 | MTR_1g092440 | 43.787 | 338 | 137 | 4 | 146 | 436 | 293 | 624 | 6.47e-88 | 281 |
| MS.gene08318.t1 | MTR_8g060700 | 58.475 | 236 | 95 | 2 | 121 | 356 | 435 | 667 | 1.09e-85 | 276 |
| MS.gene08318.t1 | MTR_8g060700 | 58.475 | 236 | 95 | 2 | 121 | 356 | 435 | 667 | 2.55e-85 | 276 |
| MS.gene08318.t1 | MTR_1g092465 | 48.421 | 285 | 114 | 4 | 103 | 384 | 175 | 429 | 3.16e-84 | 266 |
| MS.gene08318.t1 | MTR_4g020620 | 54.741 | 232 | 97 | 1 | 158 | 389 | 604 | 827 | 1.38e-83 | 275 |
| MS.gene08318.t1 | MTR_7g047570 | 47.842 | 278 | 136 | 5 | 161 | 431 | 7 | 282 | 3.65e-81 | 254 |
| MS.gene08318.t1 | MTR_7g451770 | 47.842 | 278 | 136 | 5 | 161 | 431 | 7 | 282 | 3.65e-81 | 254 |
| MS.gene08318.t1 | MTR_2g018540 | 51.037 | 241 | 93 | 4 | 150 | 387 | 87 | 305 | 3.73e-78 | 247 |
| MS.gene08318.t1 | MTR_7g451800 | 46.570 | 277 | 139 | 5 | 162 | 431 | 8 | 282 | 1.56e-76 | 243 |
| MS.gene08318.t1 | MTR_7g047620 | 46.570 | 277 | 139 | 5 | 162 | 431 | 8 | 282 | 1.56e-76 | 243 |
| MS.gene08318.t1 | MTR_4g020620 | 56.281 | 199 | 79 | 1 | 158 | 356 | 546 | 736 | 1.08e-72 | 244 |
| MS.gene08318.t1 | MTR_4g007210 | 41.346 | 312 | 162 | 5 | 134 | 436 | 26 | 325 | 1.91e-72 | 234 |
| MS.gene08318.t1 | MTR_2g079280 | 45.600 | 250 | 106 | 3 | 146 | 395 | 81 | 300 | 2.60e-68 | 221 |
| MS.gene08318.t1 | MTR_4g086440 | 53.886 | 193 | 88 | 1 | 191 | 383 | 37 | 228 | 3.83e-68 | 220 |
| MS.gene08318.t1 | MTR_1g092490 | 52.709 | 203 | 93 | 2 | 236 | 437 | 55 | 255 | 1.97e-65 | 212 |
| MS.gene08318.t1 | MTR_8g071040 | 30.894 | 123 | 75 | 3 | 190 | 312 | 3 | 115 | 4.68e-11 | 61.2 |
| MS.gene08318.t1 | MTR_1g021150 | 29.787 | 141 | 88 | 4 | 190 | 329 | 3 | 133 | 4.77e-11 | 61.2 |
| MS.gene08318.t1 | MTR_7g116940 | 30.233 | 129 | 75 | 3 | 190 | 312 | 3 | 122 | 6.27e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08318.t1 | AT1G53025 | 52.632 | 304 | 137 | 3 | 143 | 443 | 225 | 524 | 3.90e-109 | 333 |
| MS.gene08318.t1 | AT1G53025 | 52.632 | 304 | 137 | 3 | 143 | 443 | 225 | 524 | 6.91e-109 | 333 |
| MS.gene08318.t1 | AT3G15355 | 55.682 | 264 | 113 | 2 | 159 | 422 | 305 | 564 | 7.28e-101 | 314 |
| MS.gene08318.t1 | AT1G53023 | 50.836 | 299 | 124 | 4 | 143 | 431 | 2 | 287 | 2.20e-99 | 301 |
| MS.gene08318.t1 | AT2G16920 | 42.659 | 361 | 191 | 7 | 84 | 437 | 746 | 1097 | 6.34e-88 | 291 |
| MS.gene08318.t1 | AT2G16920 | 42.659 | 361 | 191 | 7 | 84 | 437 | 746 | 1097 | 6.34e-88 | 291 |
| MS.gene08318.t1 | AT2G33770 | 48.410 | 283 | 138 | 2 | 158 | 440 | 632 | 906 | 1.84e-86 | 284 |
| MS.gene08318.t1 | AT5G05080 | 32.812 | 128 | 74 | 4 | 186 | 313 | 8 | 123 | 1.56e-12 | 67.8 |
| MS.gene08318.t1 | AT5G05080 | 32.812 | 128 | 74 | 4 | 186 | 313 | 8 | 123 | 1.56e-12 | 67.8 |
| MS.gene08318.t1 | AT5G05080 | 32.812 | 128 | 74 | 4 | 186 | 313 | 8 | 123 | 1.56e-12 | 67.8 |
| MS.gene08318.t1 | AT5G05080 | 32.812 | 128 | 74 | 4 | 186 | 313 | 8 | 123 | 1.56e-12 | 67.8 |
| MS.gene08318.t1 | AT5G41700 | 30.872 | 149 | 91 | 5 | 190 | 336 | 3 | 141 | 8.67e-12 | 63.5 |
| MS.gene08318.t1 | AT3G08690 | 30.556 | 144 | 89 | 4 | 190 | 332 | 3 | 136 | 4.28e-11 | 61.2 |
| MS.gene08318.t1 | AT3G08690 | 30.556 | 144 | 89 | 4 | 190 | 332 | 3 | 136 | 4.28e-11 | 61.2 |
Find 101 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCTAGGATGGAGCTTATT+AGG | 0.145484 | 4.1:-16498145 | MS.gene08318:CDS |
| TTTCCATTATTATATAAATT+TGG | 0.177130 | 4.1:+16497914 | None:intergenic |
| TGTAGCATGGTTGATTTATC+TGG | 0.257661 | 4.1:+16497836 | None:intergenic |
| CTTCTGTTGCCAGGATGCTT+TGG | 0.314493 | 4.1:-16499189 | MS.gene08318:intron |
| AATCCAAATTTATATAATAA+TGG | 0.333342 | 4.1:-16497917 | MS.gene08318:CDS |
| CTTGACGACGACGCCAGAAT+TGG | 0.336149 | 4.1:+16500274 | None:intergenic |
| AAAGTATGCCTTAGTCTCTT+AGG | 0.344468 | 4.1:-16497893 | MS.gene08318:CDS |
| TTTCGAACTGGACTCTGAAT+TGG | 0.355051 | 4.1:+16498848 | None:intergenic |
| CAGCCTGGGACCTTCACACC+TGG | 0.359549 | 4.1:+16495822 | None:intergenic |
| GACAATGTGGATTTGCCTCC+GGG | 0.372987 | 4.1:-16498930 | MS.gene08318:CDS |
| TGCCAGGATGCTTTGGTCCC+TGG | 0.386858 | 4.1:-16499182 | MS.gene08318:intron |
| TTGCGGGACACTTCCGCCTA+AGG | 0.390892 | 4.1:-16496129 | MS.gene08318:CDS |
| TGTATACATCATTGTCTTCA+AGG | 0.393420 | 4.1:+16497679 | None:intergenic |
| ACTAGCATTACGACTACTTT+GGG | 0.394996 | 4.1:+16496033 | None:intergenic |
| TGCTGCTGCTACTGCTAACT+TGG | 0.399297 | 4.1:-16495876 | MS.gene08318:CDS |
| TGTATTATCATTGTAATCCT+TGG | 0.400389 | 4.1:+16497712 | None:intergenic |
| GGAACTGCAGGGTACTTTGC+AGG | 0.401038 | 4.1:+16498056 | None:intergenic |
| CACTAGCATTACGACTACTT+TGG | 0.405676 | 4.1:+16496032 | None:intergenic |
| ATGGTAAGAACTGCGAAAAC+TGG | 0.416419 | 4.1:-16497862 | MS.gene08318:CDS |
| ATCTACTTCAGCTTTCGAAC+TGG | 0.417449 | 4.1:+16498836 | None:intergenic |
| ATCTTATCATAATGATGATC+AGG | 0.419705 | 4.1:+16498747 | None:intergenic |
| ATCTAGGATGGAGCTTATTA+GGG | 0.420392 | 4.1:-16498144 | MS.gene08318:CDS |
| TCAATGTCACTGAATTCAAT+TGG | 0.421474 | 4.1:-16499095 | MS.gene08318:CDS |
| AATTTCAGGCAGCTGTGAAT+AGG | 0.427761 | 4.1:-16495988 | MS.gene08318:CDS |
| TTGACGACGACGCCAGAATT+GGG | 0.428770 | 4.1:+16500275 | None:intergenic |
| ATCAACCATGCTACAAGTCT+TGG | 0.437396 | 4.1:-16497828 | MS.gene08318:CDS |
| ATGCAGTCATGCAAAAGTTT+CGG | 0.439516 | 4.1:-16498803 | MS.gene08318:CDS |
| GATCATCATTATGATAAGAT+AGG | 0.441368 | 4.1:-16498744 | MS.gene08318:CDS |
| TGACAATGTGGATTTGCCTC+CGG | 0.442691 | 4.1:-16498931 | MS.gene08318:CDS |
| TCTTACAGCGACCAAAGAAC+TGG | 0.445315 | 4.1:-16498605 | MS.gene08318:intron |
| TTGTGAGAGTTTGTGAATCT+AGG | 0.448277 | 4.1:-16498160 | MS.gene08318:CDS |
| TCAGTATGTTCCTCGCCCTT+AGG | 0.453082 | 4.1:+16496113 | None:intergenic |
| TTATGTAAAACTTCTCCAAC+TGG | 0.453968 | 4.1:+16496061 | None:intergenic |
| AGCATCAGTGCCTTGGTTGA+AGG | 0.462539 | 4.1:-16498901 | MS.gene08318:CDS |
| ACGAAAACAAGAGGAAGAGC+AGG | 0.482338 | 4.1:-16500249 | MS.gene08318:intron |
| CTCATAGAATTTCCATGACC+AGG | 0.487258 | 4.1:+16499164 | None:intergenic |
| GGAGTTATATTATAAATCTC+AGG | 0.487573 | 4.1:+16495899 | None:intergenic |
| ATGAGTGTCGGAGAATCATC+TGG | 0.492477 | 4.1:-16499146 | MS.gene08318:CDS |
| TAATAGTCAGAGCCATCGTC+AGG | 0.495284 | 4.1:+16499005 | None:intergenic |
| GCTGTCATCGTTGGACCTCT+AGG | 0.497159 | 4.1:-16498122 | MS.gene08318:CDS |
| GATGCTTTGGTCCCTGGTCA+TGG | 0.499453 | 4.1:-16499176 | MS.gene08318:CDS |
| CTTATTAGGGCTGTCATCGT+TGG | 0.504437 | 4.1:-16498131 | MS.gene08318:CDS |
| CGATATGACTCAGCATATCC+AGG | 0.506421 | 4.1:+16497758 | None:intergenic |
| GACACTTCCGCCTAAGGGCG+AGG | 0.508128 | 4.1:-16496123 | MS.gene08318:CDS |
| ATACATACCGGTGGAACTGC+AGG | 0.508289 | 4.1:+16498044 | None:intergenic |
| CCCGCAACAAAGTCCTCAAA+AGG | 0.519018 | 4.1:+16496145 | None:intergenic |
| TCGAAATTCTTCGCAGTCTG+TGG | 0.527632 | 4.1:+16495925 | None:intergenic |
| AGCCTGGGACCTTCACACCT+GGG | 0.528732 | 4.1:+16495823 | None:intergenic |
| GGCACTGATGCTTCTACCCC+CGG | 0.533051 | 4.1:+16498912 | None:intergenic |
| AAGTTAGCAGTAGCAGCAGC+AGG | 0.536604 | 4.1:+16495878 | None:intergenic |
| GCCACGTACCTAAGAGACTA+AGG | 0.539509 | 4.1:+16497885 | None:intergenic |
| TGCTTCAGCCGCAGAGACAC+AGG | 0.549616 | 4.1:-16498721 | MS.gene08318:intron |
| TGCGGGACACTTCCGCCTAA+GGG | 0.551421 | 4.1:-16496128 | MS.gene08318:CDS |
| TTCATTTCACAACGATGATG+AGG | 0.553115 | 4.1:-16499057 | MS.gene08318:CDS |
| ATCGTGCTGATGAGGGGCAA+AGG | 0.554509 | 4.1:-16497739 | MS.gene08318:CDS |
| TACACTGCGTAAACCACCTA+AGG | 0.559413 | 4.1:-16497660 | MS.gene08318:intron |
| GAAGAAAAGACCGTCATGGT+AGG | 0.560934 | 4.1:+16498094 | None:intergenic |
| GGGTAGAAGCATCAGTGCCT+TGG | 0.561597 | 4.1:-16498908 | MS.gene08318:CDS |
| CAGCAAGTTTACTACCACTC+AGG | 0.569662 | 4.1:-16497953 | MS.gene08318:CDS |
| AAGAAAAGACCGTCATGGTA+GGG | 0.570573 | 4.1:+16498095 | None:intergenic |
| TGACGACGACGCCAGAATTG+GGG | 0.572784 | 4.1:+16500276 | None:intergenic |
| ACTACCACTCAGGTGGCTTG+AGG | 0.574664 | 4.1:-16497943 | MS.gene08318:CDS |
| AAAGTACCCTGCAGTTCCAC+CGG | 0.575597 | 4.1:-16498051 | MS.gene08318:intron |
| GTCGGAGAATCATCTGGTAG+TGG | 0.576524 | 4.1:-16499140 | MS.gene08318:CDS |
| CATTCGACATCCTTCAACCA+AGG | 0.582609 | 4.1:+16498891 | None:intergenic |
| GAGTCATATCGTGCTGATGA+GGG | 0.583830 | 4.1:-16497746 | MS.gene08318:CDS |
| TTTATGGGACGAACCTTAGG+TGG | 0.584837 | 4.1:+16497647 | None:intergenic |
| GTATGTTCCTCGCCCTTAGG+CGG | 0.590897 | 4.1:+16496116 | None:intergenic |
| GATGTCGAATGCAAGCCGGC+TGG | 0.593939 | 4.1:-16498879 | MS.gene08318:CDS |
| GCAGGATCAATTTGACAATG+TGG | 0.594867 | 4.1:-16498943 | MS.gene08318:CDS |
| GAGAGTTTGTGAATCTAGGA+TGG | 0.598904 | 4.1:-16498156 | MS.gene08318:CDS |
| TTGTAGATCATATGCTGAGG+GGG | 0.600786 | 4.1:-16496086 | MS.gene08318:CDS |
| GAAGGATGTCGAATGCAAGC+CGG | 0.603924 | 4.1:-16498883 | MS.gene08318:CDS |
| CAATGTGGATTTGCCTCCGG+GGG | 0.605131 | 4.1:-16498928 | MS.gene08318:CDS |
| GCTTGTAGATCATATGCTGA+GGG | 0.605567 | 4.1:-16496088 | MS.gene08318:CDS |
| CATGGAAATTCTATGAGTGT+CGG | 0.608315 | 4.1:-16499158 | MS.gene08318:CDS |
| CGTCAAGAAACGAAAACAAG+AGG | 0.608319 | 4.1:-16500258 | MS.gene08318:CDS |
| AGCTTGTAGATCATATGCTG+AGG | 0.609426 | 4.1:-16496089 | MS.gene08318:CDS |
| ACAACATAACCCAGGTGTGA+AGG | 0.612629 | 4.1:-16495832 | None:intergenic |
| GACGACGACGCCAGAATTGG+GGG | 0.621069 | 4.1:+16500277 | None:intergenic |
| CAAAGAAGAAAAGACCGTCA+TGG | 0.627963 | 4.1:+16498090 | None:intergenic |
| TGAGGGGCAAAGGAGATCCA+AGG | 0.628352 | 4.1:-16497729 | MS.gene08318:CDS |
| AGTCATATCGTGCTGATGAG+GGG | 0.629146 | 4.1:-16497745 | MS.gene08318:CDS |
| CAAGTTTACTACCACTCAGG+TGG | 0.636743 | 4.1:-16497950 | MS.gene08318:CDS |
| AGTCTCTTAGGTACGTGGCA+TGG | 0.640884 | 4.1:-16497881 | MS.gene08318:CDS |
| AGAAACCAAGACTTGTAGCA+TGG | 0.645266 | 4.1:+16497823 | None:intergenic |
| CTAGGCACTCCCTACCATGA+CGG | 0.653137 | 4.1:-16498104 | MS.gene08318:CDS |
| TACATACCGGTGGAACTGCA+GGG | 0.654447 | 4.1:+16498045 | None:intergenic |
| ACAATGTGGATTTGCCTCCG+GGG | 0.658182 | 4.1:-16498929 | MS.gene08318:CDS |
| GCCTTAGTCTCTTAGGTACG+TGG | 0.660014 | 4.1:-16497886 | MS.gene08318:CDS |
| TGAGTCATATCGTGCTGATG+AGG | 0.660537 | 4.1:-16497747 | MS.gene08318:CDS |
| TCATAGAATTTCCATGACCA+GGG | 0.666561 | 4.1:+16499165 | None:intergenic |
| ATATATCACCTGTGTCTCTG+CGG | 0.668995 | 4.1:+16498713 | None:intergenic |
| CTCTGACTATTACGACGATG+AGG | 0.674543 | 4.1:-16498994 | MS.gene08318:CDS |
| TCATGGTAGGGAGTGCCTAG+AGG | 0.675357 | 4.1:+16498107 | None:intergenic |
| TGTAGATCATATGCTGAGGG+GGG | 0.684377 | 4.1:-16496085 | MS.gene08318:CDS |
| GCACTTGAAGATCCTGACGA+TGG | 0.700157 | 4.1:-16499017 | MS.gene08318:CDS |
| AGAGAACAACAACATAACCC+AGG | 0.704469 | 4.1:-16495840 | MS.gene08318:CDS |
| CTTGTAGATCATATGCTGAG+GGG | 0.711409 | 4.1:-16496087 | MS.gene08318:CDS |
| GAATTGGCATGAGAACCAGC+CGG | 0.715276 | 4.1:+16498864 | None:intergenic |
| TTAGCCTCAAGCCACCTGAG+TGG | 0.718697 | 4.1:+16497939 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCCAAATTTATATAATAA+TGG | - | chr4.1:16498220-16498239 | MS.gene08318:intron | 10.0% |
| !! | CATATTAGTAATATTAATTA+GGG | - | chr4.1:16499096-16499115 | MS.gene08318:CDS | 10.0% |
| !! | GAACTTATAAATTAATATAA+AGG | + | chr4.1:16498619-16498638 | None:intergenic | 10.0% |
| !! | GTAATTGATTATAAATATTA+TGG | + | chr4.1:16499282-16499301 | None:intergenic | 10.0% |
| !! | TTAACATATATTAAGAAAAT+TGG | - | chr4.1:16498980-16498999 | MS.gene08318:CDS | 10.0% |
| !! | TTTCCATTATTATATAAATT+TGG | + | chr4.1:16498226-16498245 | None:intergenic | 10.0% |
| !! | AAAAATAAAAATGATACTGA+GGG | + | chr4.1:16498870-16498889 | None:intergenic | 15.0% |
| !! | AAAATAAAAATAAAAGGCAA+AGG | + | chr4.1:16497728-16497747 | None:intergenic | 15.0% |
| !! | ACTAAATTACCAAAATAATA+AGG | + | chr4.1:16497888-16497907 | None:intergenic | 15.0% |
| !! | GCATATTAGTAATATTAATT+AGG | - | chr4.1:16499095-16499114 | MS.gene08318:CDS | 15.0% |
| !! | TAAAAATAAAAATGATACTG+AGG | + | chr4.1:16498871-16498890 | None:intergenic | 15.0% |
| !! | TTAATACATCTATACATAAA+GGG | + | chr4.1:16499052-16499071 | None:intergenic | 15.0% |
| !! | TTTAATACATCTATACATAA+AGG | + | chr4.1:16499053-16499072 | None:intergenic | 15.0% |
| !!! | AGAACTAAATATTGTTTTAT+GGG | + | chr4.1:16498508-16498527 | None:intergenic | 15.0% |
| !!! | AGTTTTGTTTTAATAGTTTA+AGG | - | chr4.1:16498534-16498553 | MS.gene08318:intron | 15.0% |
| !!! | ATTAATAATTGAAGCAATTT+TGG | + | chr4.1:16499735-16499754 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTAGTTTTGTCAA+TGG | - | chr4.1:16497743-16497762 | MS.gene08318:CDS | 15.0% |
| !!! | GTTTATAAAGATACAATTTT+CGG | + | chr4.1:16498648-16498667 | None:intergenic | 15.0% |
| !!! | GTTTTGTTTTAATAGTTTAA+GGG | - | chr4.1:16498535-16498554 | MS.gene08318:intron | 15.0% |
| !!! | TAAATTTATGCTGATTTATT+GGG | - | chr4.1:16496776-16496795 | MS.gene08318:intron | 15.0% |
| !!! | TACATTCTTAAAAATACTTT+TGG | - | chr4.1:16497778-16497797 | MS.gene08318:CDS | 15.0% |
| !!! | TTATTTTTTATCAGAATAGT+TGG | - | chr4.1:16496232-16496251 | MS.gene08318:intron | 15.0% |
| !! | AATTAATTATTTCAGACTCT+AGG | - | chr4.1:16499856-16499875 | MS.gene08318:intron | 20.0% |
| !! | ATAAAAAATTACTCTCTTGA+GGG | + | chr4.1:16497631-16497650 | None:intergenic | 20.0% |
| !! | ATTCATTATTCCTAACATAT+AGG | + | chr4.1:16496536-16496555 | None:intergenic | 20.0% |
| !! | ATTTCAAAGTTAGATCATAT+AGG | + | chr4.1:16499701-16499720 | None:intergenic | 20.0% |
| !! | ATTTCAACTTATTCATTGTA+TGG | + | chr4.1:16496814-16496833 | None:intergenic | 20.0% |
| !! | CAATTACTAACATCAAAATT+TGG | - | chr4.1:16499295-16499314 | MS.gene08318:intron | 20.0% |
| !! | TAATTGAAGAAAATAAGCAA+TGG | - | chr4.1:16499661-16499680 | MS.gene08318:intron | 20.0% |
| !! | TATAAAAAATTACTCTCTTG+AGG | + | chr4.1:16497632-16497651 | None:intergenic | 20.0% |
| !! | TCATAATAATTTCAAAAGAG+CGG | + | chr4.1:16496258-16496277 | None:intergenic | 20.0% |
| !! | TTAAATTAAATCATCACTCA+AGG | - | chr4.1:16497807-16497826 | MS.gene08318:CDS | 20.0% |
| !! | TTAATATTACTAATATGCCT+TGG | + | chr4.1:16499093-16499112 | None:intergenic | 20.0% |
| !! | TTATAAATATTATGGCAAGA+TGG | + | chr4.1:16499274-16499293 | None:intergenic | 20.0% |
| !! | TTTCAAAGTTAGATCATATA+GGG | + | chr4.1:16499700-16499719 | None:intergenic | 20.0% |
| !!! | AATGAATAAGTTGAAATATG+TGG | - | chr4.1:16496817-16496836 | MS.gene08318:intron | 20.0% |
| !!! | ATAATGAATCGTTTTGTAAA+TGG | - | chr4.1:16496547-16496566 | MS.gene08318:intron | 20.0% |
| !!! | ATGAATAAGTTGAAATATGT+GGG | - | chr4.1:16496818-16496837 | MS.gene08318:intron | 20.0% |
| !!! | CAGAACTAAATATTGTTTTA+TGG | + | chr4.1:16498509-16498528 | None:intergenic | 20.0% |
| !!! | CTAAATTTATGCTGATTTAT+TGG | - | chr4.1:16496775-16496794 | MS.gene08318:intron | 20.0% |
| !!! | GAAATTCAACCTTATTATTT+TGG | - | chr4.1:16497876-16497895 | MS.gene08318:CDS | 20.0% |
| !!! | TATTGATTTTTTATCTTCCA+AGG | - | chr4.1:16499073-16499092 | MS.gene08318:CDS | 20.0% |
| !!! | TTGGGTTGTTTTTTTTATTT+CGG | - | chr4.1:16496058-16496077 | MS.gene08318:CDS | 20.0% |
| !!! | TTTCACTATATCATTTTTAC+AGG | + | chr4.1:16499616-16499635 | None:intergenic | 20.0% |
| ! | AAATGAGCTTATAAAAAGAG+AGG | + | chr4.1:16498902-16498921 | None:intergenic | 25.0% |
| ! | AATATAAGTTCGCAATTTGA+AGG | + | chr4.1:16496598-16496617 | None:intergenic | 25.0% |
| ! | AATCATGAAACTGAAATGAA+AGG | + | chr4.1:16495924-16495943 | None:intergenic | 25.0% |
| ! | AATGAGCTTATAAAAAGAGA+GGG | + | chr4.1:16498901-16498920 | None:intergenic | 25.0% |
| ! | AGAAAAAGATATAGTTTACC+TGG | + | chr4.1:16497603-16497622 | None:intergenic | 25.0% |
| ! | AGAAACATATAATCGGATTA+AGG | + | chr4.1:16497515-16497534 | None:intergenic | 25.0% |
| ! | AGCTTATAAAAAGAGATAGA+GGG | + | chr4.1:16498940-16498959 | None:intergenic | 25.0% |
| ! | ATCATGAAACTGAAATGAAA+GGG | + | chr4.1:16495923-16495942 | None:intergenic | 25.0% |
| ! | ATCTGAGAAAGAAAAAAACA+TGG | + | chr4.1:16497684-16497703 | None:intergenic | 25.0% |
| ! | ATCTTATCATAATGATGATC+AGG | + | chr4.1:16497393-16497412 | None:intergenic | 25.0% |
| ! | CCATATACATATTAGGATTT+AGG | - | chr4.1:16499397-16499416 | MS.gene08318:intron | 25.0% |
| ! | CCTAAATCCTAATATGTATA+TGG | + | chr4.1:16499400-16499419 | None:intergenic | 25.0% |
| ! | GATCATCATTATGATAAGAT+AGG | - | chr4.1:16497393-16497412 | MS.gene08318:intron | 25.0% |
| ! | GGAGTTATATTATAAATCTC+AGG | + | chr4.1:16500241-16500260 | None:intergenic | 25.0% |
| ! | TAAAAAATTACTCTCTTGAG+GGG | + | chr4.1:16497630-16497649 | None:intergenic | 25.0% |
| ! | TAAGAACCAAAAAGAATTTC+AGG | - | chr4.1:16500135-16500154 | MS.gene08318:intron | 25.0% |
| ! | TGTATTATCATTGTAATCCT+TGG | + | chr4.1:16498428-16498447 | None:intergenic | 25.0% |
| ! | TTAACTTTATAGCTCATCAA+TGG | - | chr4.1:16496279-16496298 | MS.gene08318:intron | 25.0% |
| ! | TTATCATATTGCTGTAAAAG+TGG | - | chr4.1:16496625-16496644 | MS.gene08318:intron | 25.0% |
| ! | TTTGGTGAAAAATGCAATAA+GGG | + | chr4.1:16500185-16500204 | None:intergenic | 25.0% |
| !! | AAAGATACAATTTTCGGATT+AGG | + | chr4.1:16498748-16498767 | None:intergenic | 25.0% |
| !! | AATCTAGATTTCATGTTTTC+TGG | - | chr4.1:16499936-16499955 | MS.gene08318:intron | 25.0% |
| !! | ATTGCATTTTTCACCAAAAA+TGG | - | chr4.1:16500187-16500206 | MS.gene08318:intron | 25.0% |
| !! | ATTTCAGTTTCATGATTTTC+TGG | - | chr4.1:16495927-16495946 | MS.gene08318:CDS | 25.0% |
| !! | GTTTTGTGTGCATATAAATA+GGG | - | chr4.1:16499125-16499144 | MS.gene08318:CDS | 25.0% |
| !! | TGTTTTGTGTGCATATAAAT+AGG | - | chr4.1:16499124-16499143 | MS.gene08318:CDS | 25.0% |
| !! | TTTTGGTGAAAAATGCAATA+AGG | + | chr4.1:16500186-16500205 | None:intergenic | 25.0% |
| !!! | ATTTTTTTTGTCCAGTTCTT+TGG | + | chr4.1:16497546-16497565 | None:intergenic | 25.0% |
| !!! | GTTGTTTTACCTCTATAAAT+TGG | - | chr4.1:16499232-16499251 | MS.gene08318:intron | 25.0% |
| !!! | TTCATGATTTTCTGGTTTTA+TGG | - | chr4.1:16495935-16495954 | MS.gene08318:CDS | 25.0% |
| !!! | TTTGTCTTTTTTGACGAATT+GGG | - | chr4.1:16496040-16496059 | MS.gene08318:CDS | 25.0% |
| !!! | TTTTGTCTTTTTTGACGAAT+TGG | - | chr4.1:16496039-16496058 | MS.gene08318:CDS | 25.0% |
| AAAAAATTACTCTCTTGAGG+GGG | + | chr4.1:16497629-16497648 | None:intergenic | 30.0% | |
| AAAATAAGCCTAAACCAAAC+AGG | - | chr4.1:16498844-16498863 | MS.gene08318:CDS | 30.0% | |
| AAACACGCCATATACATATT+AGG | - | chr4.1:16499390-16499409 | MS.gene08318:intron | 30.0% | |
| AAGACACATCTTAAAACAAG+TGG | + | chr4.1:16498129-16498148 | None:intergenic | 30.0% | |
| ACAACAGAAAATGAGAAAAC+TGG | + | chr4.1:16499217-16499236 | None:intergenic | 30.0% | |
| ACGAACCCTAGTATTTAATT+TGG | + | chr4.1:16496213-16496232 | None:intergenic | 30.0% | |
| AGCAGCCAAATTAAATACTA+GGG | - | chr4.1:16496205-16496224 | MS.gene08318:intron | 30.0% | |
| ATAATAAGCCTAATCCAAAC+GGG | + | chr4.1:16498561-16498580 | None:intergenic | 30.0% | |
| CATAATAAGCCTAATCCAAA+CGG | + | chr4.1:16498562-16498581 | None:intergenic | 30.0% | |
| CGCTGTAAGAAACATATAAT+CGG | + | chr4.1:16497522-16497541 | None:intergenic | 30.0% | |
| CTGCTCATCTATCATTATAA+TGG | + | chr4.1:16499353-16499372 | None:intergenic | 30.0% | |
| GAGCTTATAAAAAGAGATAG+AGG | + | chr4.1:16498941-16498960 | None:intergenic | 30.0% | |
| GGAACATTAATGATACATAC+CGG | + | chr4.1:16498108-16498127 | None:intergenic | 30.0% | |
| TATAACCCTAAAACGTGAAA+TGG | + | chr4.1:16496102-16496121 | None:intergenic | 30.0% | |
| TATCCAGGCTCATTAAAAAA+AGG | + | chr4.1:16498367-16498386 | None:intergenic | 30.0% | |
| TCAATGTCACTGAATTCAAT+TGG | - | chr4.1:16497042-16497061 | MS.gene08318:intron | 30.0% | |
| TGACGACAATAGTAAAAGTT+TGG | + | chr4.1:16497847-16497866 | None:intergenic | 30.0% | |
| TGTAACTGCAAAATCCATTA+AGG | - | chr4.1:16499781-16499800 | MS.gene08318:intron | 30.0% | |
| TGTATACATCATTGTCTTCA+AGG | + | chr4.1:16498461-16498480 | None:intergenic | 30.0% | |
| TTAAGGTCATGTTAAGCATA+TGG | + | chr4.1:16496895-16496914 | None:intergenic | 30.0% | |
| TTATAATGATAGATGAGCAG+AGG | - | chr4.1:16499353-16499372 | MS.gene08318:intron | 30.0% | |
| TTATGTAAAACTTCTCCAAC+TGG | + | chr4.1:16500079-16500098 | None:intergenic | 30.0% | |
| TTTACCTCTATAAATTGGAC+TGG | - | chr4.1:16499237-16499256 | MS.gene08318:intron | 30.0% | |
| ! | TCCGTAAAAACATTTTCAAC+AGG | + | chr4.1:16496308-16496327 | None:intergenic | 30.0% |
| ! | TCTCACAAAGATTTTATCTG+TGG | + | chr4.1:16497965-16497984 | None:intergenic | 30.0% |
| !! | AGATGAATACTCATTTTTGC+AGG | - | chr4.1:16497176-16497195 | MS.gene08318:intron | 30.0% |
| !! | ATGCTGATTTATTGGGAAAA+TGG | - | chr4.1:16496783-16496802 | MS.gene08318:intron | 30.0% |
| !! | ATTTGCCATTTCACGTTTTA+GGG | - | chr4.1:16496094-16496113 | MS.gene08318:CDS | 30.0% |
| !! | ATTTTAGAGGAAAATTTGCC+AGG | - | chr4.1:16497582-16497601 | MS.gene08318:intron | 30.0% |
| !! | GCCTGTTGAAAATGTTTTTA+CGG | - | chr4.1:16496304-16496323 | MS.gene08318:intron | 30.0% |
| !! | TGCTGATTTATTGGGAAAAT+GGG | - | chr4.1:16496784-16496803 | MS.gene08318:intron | 30.0% |
| !! | TTAGTTTGCAACAGAATAGT+TGG | - | chr4.1:16496135-16496154 | MS.gene08318:CDS | 30.0% |
| !!! | GTTAACATGATTTTTTGTGC+AGG | - | chr4.1:16496863-16496882 | MS.gene08318:intron | 30.0% |
| AAAAATTACTCTCTTGAGGG+GGG | + | chr4.1:16497628-16497647 | None:intergenic | 35.0% | |
| AAAGTATGCCTTAGTCTCTT+AGG | - | chr4.1:16498244-16498263 | MS.gene08318:intron | 35.0% | |
| AACATCCCTGTATCTTGAAA+TGG | - | chr4.1:16499451-16499470 | MS.gene08318:intron | 35.0% | |
| ACATGACCTTAAGCTTTACA+AGG | - | chr4.1:16496903-16496922 | MS.gene08318:intron | 35.0% | |
| ACATTAATGATACATACCGG+TGG | + | chr4.1:16498105-16498124 | None:intergenic | 35.0% | |
| ACTAGCATTACGACTACTTT+GGG | + | chr4.1:16500107-16500126 | None:intergenic | 35.0% | |
| AGAACCAGTCCAATTTATAG+AGG | + | chr4.1:16499244-16499263 | None:intergenic | 35.0% | |
| AGGTAACCATTTCAAGATAC+AGG | + | chr4.1:16499460-16499479 | None:intergenic | 35.0% | |
| ATATGTGTGTTCTGGTACAA+AGG | + | chr4.1:16499809-16499828 | None:intergenic | 35.0% | |
| ATGCAGTCATGCAAAAGTTT+CGG | - | chr4.1:16497334-16497353 | MS.gene08318:intron | 35.0% | |
| ATTACGATTCCTGAGTTTCA+TGG | - | chr4.1:16499166-16499185 | MS.gene08318:CDS | 35.0% | |
| CAAAAAAAATCCAGGAGGAA+TGG | - | chr4.1:16497556-16497575 | MS.gene08318:intron | 35.0% | |
| CAAAACCCTTGTAAAGCTTA+AGG | + | chr4.1:16496912-16496931 | None:intergenic | 35.0% | |
| CAGCAGCCAAATTAAATACT+AGG | - | chr4.1:16496204-16496223 | MS.gene08318:intron | 35.0% | |
| CATCTATACATAAAGGGCAA+TGG | + | chr4.1:16499046-16499065 | None:intergenic | 35.0% | |
| CATGACCTTAAGCTTTACAA+GGG | - | chr4.1:16496904-16496923 | MS.gene08318:intron | 35.0% | |
| CATGGAAATTCTATGAGTGT+CGG | - | chr4.1:16496979-16496998 | MS.gene08318:intron | 35.0% | |
| GAAAAACCACTTGCGTTTAA+GGG | - | chr4.1:16499493-16499512 | MS.gene08318:intron | 35.0% | |
| GAACTGGACAAAAAAAATCC+AGG | - | chr4.1:16497548-16497567 | MS.gene08318:intron | 35.0% | |
| GACATTCACTGATACATACA+CGG | - | chr4.1:16496367-16496386 | MS.gene08318:intron | 35.0% | |
| GGTAACCATTTCAAGATACA+GGG | + | chr4.1:16499459-16499478 | None:intergenic | 35.0% | |
| TAGTAGCCACGTTTGAATTT+AGG | + | chr4.1:16496486-16496505 | None:intergenic | 35.0% | |
| TCATAGAATTTCCATGACCA+GGG | + | chr4.1:16496975-16496994 | None:intergenic | 35.0% | |
| TCCCTAAAAGTTAGCTATCA+GGG | + | chr4.1:16499570-16499589 | None:intergenic | 35.0% | |
| TGAAAAACCACTTGCGTTTA+AGG | - | chr4.1:16499492-16499511 | MS.gene08318:intron | 35.0% | |
| TGCATATAAATAGGGATGGA+GGG | - | chr4.1:16499133-16499152 | MS.gene08318:CDS | 35.0% | |
| TGTGTGCATATAAATAGGGA+TGG | - | chr4.1:16499129-16499148 | MS.gene08318:CDS | 35.0% | |
| TTCATTTCACAACGATGATG+AGG | - | chr4.1:16497080-16497099 | MS.gene08318:intron | 35.0% | |
| TTCCCTAAAAGTTAGCTATC+AGG | + | chr4.1:16499571-16499590 | None:intergenic | 35.0% | |
| TTGTGAGAGTTTGTGAATCT+AGG | - | chr4.1:16497977-16497996 | MS.gene08318:intron | 35.0% | |
| ! | AATCTAGGATGGAGCTTATT+AGG | - | chr4.1:16497992-16498011 | MS.gene08318:intron | 35.0% |
| ! | ATCTAGGATGGAGCTTATTA+GGG | - | chr4.1:16497993-16498012 | MS.gene08318:intron | 35.0% |
| ! | CTAAAATTTTCCATTCCTCC+TGG | + | chr4.1:16497569-16497588 | None:intergenic | 35.0% |
| ! | GCTGATTTATTGGGAAAATG+GGG | - | chr4.1:16496785-16496804 | MS.gene08318:intron | 35.0% |
| ! | GGAGGAATGGAAAATTTTAG+AGG | - | chr4.1:16497569-16497588 | MS.gene08318:intron | 35.0% |
| ! | GTTTTTCACAAACACGTATG+AGG | + | chr4.1:16499480-16499499 | None:intergenic | 35.0% |
| ! | TCATTTTCAATCGTCTTTGC+TGG | - | chr4.1:16497909-16497928 | MS.gene08318:CDS | 35.0% |
| ! | TGTAGCATGGTTGATTTATC+TGG | + | chr4.1:16498304-16498323 | None:intergenic | 35.0% |
| !! | CACTTTTTGTGCGTAAAAGA+AGG | + | chr4.1:16496739-16496758 | None:intergenic | 35.0% |
| !! | GATAGCTAACTTTTAGGGAA+GGG | - | chr4.1:16499571-16499590 | MS.gene08318:intron | 35.0% |
| !! | GATTTGCCATTTCACGTTTT+AGG | - | chr4.1:16496093-16496112 | MS.gene08318:CDS | 35.0% |
| !! | TGATAGCTAACTTTTAGGGA+AGG | - | chr4.1:16499570-16499589 | MS.gene08318:intron | 35.0% |
| !!! | AAGCCTTTTTTTAATGAGCC+TGG | - | chr4.1:16498361-16498380 | MS.gene08318:intron | 35.0% |
| AAGAAAAGACCGTCATGGTA+GGG | + | chr4.1:16498045-16498064 | None:intergenic | 40.0% | |
| AATTTCAGGCAGCTGTGAAT+AGG | - | chr4.1:16500149-16500168 | MS.gene08318:intron | 40.0% | |
| AGAAACCAAGACTTGTAGCA+TGG | + | chr4.1:16498317-16498336 | None:intergenic | 40.0% | |
| AGAGAACAACAACATAACCC+AGG | - | chr4.1:16500297-16500316 | MS.gene08318:CDS | 40.0% | |
| AGCTTGTAGATCATATGCTG+AGG | - | chr4.1:16500048-16500067 | MS.gene08318:intron | 40.0% | |
| AGTTTCATGGTTAGGTTAGG+TGG | - | chr4.1:16499179-16499198 | MS.gene08318:CDS | 40.0% | |
| ATATATCACCTGTGTCTCTG+CGG | + | chr4.1:16497427-16497446 | None:intergenic | 40.0% | |
| ATCAACCATGCTACAAGTCT+TGG | - | chr4.1:16498309-16498328 | MS.gene08318:intron | 40.0% | |
| ATCTACTTCAGCTTTCGAAC+TGG | + | chr4.1:16497304-16497323 | None:intergenic | 40.0% | |
| ATGCAGCATGCCTATATGTT+AGG | - | chr4.1:16496523-16496542 | MS.gene08318:intron | 40.0% | |
| ATGGTAAGAACTGCGAAAAC+TGG | - | chr4.1:16498275-16498294 | MS.gene08318:intron | 40.0% | |
| CAAAGAAGAAAAGACCGTCA+TGG | + | chr4.1:16498050-16498069 | None:intergenic | 40.0% | |
| CACTAGCATTACGACTACTT+TGG | + | chr4.1:16500108-16500127 | None:intergenic | 40.0% | |
| CCCTAAAAGTTAGCTATCAG+GGG | + | chr4.1:16499569-16499588 | None:intergenic | 40.0% | |
| CCTAAAAGTTAGCTATCAGG+GGG | + | chr4.1:16499568-16499587 | None:intergenic | 40.0% | |
| CGTCAAGAAACGAAAACAAG+AGG | - | chr4.1:16495879-16495898 | MS.gene08318:CDS | 40.0% | |
| CGTTTGAATTTAGGTGGCAA+TGG | + | chr4.1:16496477-16496496 | None:intergenic | 40.0% | |
| CTAACCTAACCATGAAACTC+AGG | + | chr4.1:16499178-16499197 | None:intergenic | 40.0% | |
| CTCATAGAATTTCCATGACC+AGG | + | chr4.1:16496976-16496995 | None:intergenic | 40.0% | |
| CTGAGTTTCATGGTTAGGTT+AGG | - | chr4.1:16499176-16499195 | MS.gene08318:CDS | 40.0% | |
| CTGGACAAAAAAAATCCAGG+AGG | - | chr4.1:16497551-16497570 | MS.gene08318:intron | 40.0% | |
| CTTGTAGATCATATGCTGAG+GGG | - | chr4.1:16500050-16500069 | MS.gene08318:intron | 40.0% | |
| GAGAGTTTGTGAATCTAGGA+TGG | - | chr4.1:16497981-16498000 | MS.gene08318:intron | 40.0% | |
| GATTCCTGAGTTTCATGGTT+AGG | - | chr4.1:16499171-16499190 | MS.gene08318:CDS | 40.0% | |
| GCAGGATCAATTTGACAATG+TGG | - | chr4.1:16497194-16497213 | MS.gene08318:intron | 40.0% | |
| GCTTGTAGATCATATGCTGA+GGG | - | chr4.1:16500049-16500068 | MS.gene08318:intron | 40.0% | |
| GTGCATATAAATAGGGATGG+AGG | - | chr4.1:16499132-16499151 | MS.gene08318:CDS | 40.0% | |
| TAAACTCTCCCTAAGAGTTC+AGG | + | chr4.1:16496654-16496673 | None:intergenic | 40.0% | |
| TAATAGTTTAAGGGCCCGTT+TGG | - | chr4.1:16498544-16498563 | MS.gene08318:intron | 40.0% | |
| TAGCCACGTTTGAATTTAGG+TGG | + | chr4.1:16496483-16496502 | None:intergenic | 40.0% | |
| TTGCCACCTAAATTCAAACG+TGG | - | chr4.1:16496477-16496496 | MS.gene08318:intron | 40.0% | |
| TTGTAGATCATATGCTGAGG+GGG | - | chr4.1:16500051-16500070 | MS.gene08318:intron | 40.0% | |
| TTTACAGGTACCCAAACATG+TGG | + | chr4.1:16499601-16499620 | None:intergenic | 40.0% | |
| TTTCGAACTGGACTCTGAAT+TGG | + | chr4.1:16497292-16497311 | None:intergenic | 40.0% | |
| ! | AAGTGGATTCCTGAACTCTT+AGG | - | chr4.1:16496642-16496661 | MS.gene08318:intron | 40.0% |
| ! | ACACCTTCAATCAGAAGTGT+CGG | - | chr4.1:16496428-16496447 | MS.gene08318:intron | 40.0% |
| ! | AGGGATGTTGACTGCATAAA+AGG | + | chr4.1:16499440-16499459 | None:intergenic | 40.0% |
| ! | AGTGGATTCCTGAACTCTTA+GGG | - | chr4.1:16496643-16496662 | MS.gene08318:intron | 40.0% |
| ! | CAGCTGCCTGAAATTCTTTT+TGG | + | chr4.1:16500144-16500163 | None:intergenic | 40.0% |
| ! | CCCCTGATAGCTAACTTTTA+GGG | - | chr4.1:16499566-16499585 | MS.gene08318:intron | 40.0% |
| ! | GGGATGTTGACTGCATAAAA+GGG | + | chr4.1:16499439-16499458 | None:intergenic | 40.0% |
| ! | TGTTTTATGGGACGAACCTT+AGG | + | chr4.1:16498496-16498515 | None:intergenic | 40.0% |
| !! | CATTGACTTGCGTTAGACAT+TGG | - | chr4.1:16496403-16496422 | MS.gene08318:intron | 40.0% |
| !! | CTGGTACAAAGGTACCTTAA+TGG | + | chr4.1:16499798-16499817 | None:intergenic | 40.0% |
| !! | TCTGTTTTTCTTCTGTTGCC+AGG | - | chr4.1:16496939-16496958 | MS.gene08318:intron | 40.0% |
| AAAGTTAGCTATCAGGGGGA+TGG | + | chr4.1:16499564-16499583 | None:intergenic | 45.0% | |
| AAGCATCCCTTAAACGCAAG+TGG | + | chr4.1:16499502-16499521 | None:intergenic | 45.0% | |
| AATGATACTGAGGGCCTGTT+TGG | + | chr4.1:16498861-16498880 | None:intergenic | 45.0% | |
| ACGAAAACAAGAGGAAGAGC+AGG | - | chr4.1:16495888-16495907 | MS.gene08318:CDS | 45.0% | |
| ACGCAAGTCAATGTTGTGAC+TGG | + | chr4.1:16496396-16496415 | None:intergenic | 45.0% | |
| ACTTGCGTTTAAGGGATGCT+TGG | - | chr4.1:16499501-16499520 | MS.gene08318:intron | 45.0% | |
| CAAGTTTACTACCACTCAGG+TGG | - | chr4.1:16498187-16498206 | MS.gene08318:intron | 45.0% | |
| CAGCAAGTTTACTACCACTC+AGG | - | chr4.1:16498184-16498203 | MS.gene08318:intron | 45.0% | |
| CATTCGACATCCTTCAACCA+AGG | + | chr4.1:16497249-16497268 | None:intergenic | 45.0% | |
| CGATATGACTCAGCATATCC+AGG | + | chr4.1:16498382-16498401 | None:intergenic | 45.0% | |
| CTCTGACTATTACGACGATG+AGG | - | chr4.1:16497143-16497162 | MS.gene08318:intron | 45.0% | |
| CTTATTAGGGCTGTCATCGT+TGG | - | chr4.1:16498006-16498025 | MS.gene08318:intron | 45.0% | |
| GAAGAAAAGACCGTCATGGT+AGG | + | chr4.1:16498046-16498065 | None:intergenic | 45.0% | |
| GAAGGGTTCTCCACATGTTT+GGG | - | chr4.1:16499588-16499607 | MS.gene08318:intron | 45.0% | |
| GGAGAGTTTACTGCCCATTT+GGG | - | chr4.1:16496664-16496683 | MS.gene08318:intron | 45.0% | |
| TAATAGTCAGAGCCATCGTC+AGG | + | chr4.1:16497135-16497154 | None:intergenic | 45.0% | |
| TACACTGCGTAAACCACCTA+AGG | - | chr4.1:16498477-16498496 | MS.gene08318:intron | 45.0% | |
| TCGAAATTCTTCGCAGTCTG+TGG | + | chr4.1:16500215-16500234 | None:intergenic | 45.0% | |
| TCTTACAGCGACCAAAGAAC+TGG | - | chr4.1:16497532-16497551 | MS.gene08318:intron | 45.0% | |
| TGACAATGTGGATTTGCCTC+CGG | - | chr4.1:16497206-16497225 | MS.gene08318:intron | 45.0% | |
| TGTAGATCATATGCTGAGGG+GGG | - | chr4.1:16500052-16500071 | MS.gene08318:intron | 45.0% | |
| TTTAAGGGCCCGTTTGGATT+AGG | - | chr4.1:16498550-16498569 | MS.gene08318:intron | 45.0% | |
| TTTATGGGACGAACCTTAGG+TGG | + | chr4.1:16498493-16498512 | None:intergenic | 45.0% | |
| ! | AGTCATATCGTGCTGATGAG+GGG | - | chr4.1:16498392-16498411 | MS.gene08318:intron | 45.0% |
| ! | CCCCCTGATAGCTAACTTTT+AGG | - | chr4.1:16499565-16499584 | MS.gene08318:intron | 45.0% |
| ! | CTTTTGCATGACTGCATCTG+TGG | + | chr4.1:16497331-16497350 | None:intergenic | 45.0% |
| ! | GAGTCATATCGTGCTGATGA+GGG | - | chr4.1:16498391-16498410 | MS.gene08318:intron | 45.0% |
| ! | TGAGTCATATCGTGCTGATG+AGG | - | chr4.1:16498390-16498409 | MS.gene08318:intron | 45.0% |
| ! | TTAGTCTTTGCACTTGCGTG+TGG | - | chr4.1:16496707-16496726 | MS.gene08318:intron | 45.0% |
| ! | TTTTACGGACGACGCATACA+CGG | - | chr4.1:16496319-16496338 | MS.gene08318:intron | 45.0% |
| !! | ACCTTCAATCAGAAGTGTCG+GGG | - | chr4.1:16496430-16496449 | MS.gene08318:intron | 45.0% |
| !! | ATGAGTGTCGGAGAATCATC+TGG | - | chr4.1:16496991-16497010 | MS.gene08318:intron | 45.0% |
| !! | CACCTTCAATCAGAAGTGTC+GGG | - | chr4.1:16496429-16496448 | MS.gene08318:intron | 45.0% |
| !! | CCTTTTGAGGACTTTGTTGC+GGG | - | chr4.1:16499992-16500011 | MS.gene08318:intron | 45.0% |
| !! | GAGTGGTAGTAAACTTGCTG+CGG | + | chr4.1:16498184-16498203 | None:intergenic | 45.0% |
| !! | GCCTTTTGAGGACTTTGTTG+CGG | - | chr4.1:16499991-16500010 | MS.gene08318:intron | 45.0% |
| !! | CTAAAAAAAATAAAAATAAA+AGG | + | chr4.1:16497734-16497753 | None:intergenic | 5.0% |
| AAGTTAGCAGTAGCAGCAGC+AGG | + | chr4.1:16500262-16500281 | None:intergenic | 50.0% | |
| ACAATGTGGATTTGCCTCCG+GGG | - | chr4.1:16497208-16497227 | MS.gene08318:intron | 50.0% | |
| ACCCCGACACTTCTGATTGA+AGG | + | chr4.1:16496434-16496453 | None:intergenic | 50.0% | |
| AGCATCAGTGCCTTGGTTGA+AGG | - | chr4.1:16497236-16497255 | MS.gene08318:intron | 50.0% | |
| AGTCTCTTAGGTACGTGGCA+TGG | - | chr4.1:16498256-16498275 | MS.gene08318:intron | 50.0% | |
| ATACATACCGGTGGAACTGC+AGG | + | chr4.1:16498096-16498115 | None:intergenic | 50.0% | |
| CAAAGTCCTCAAAAGGCTGC+AGG | + | chr4.1:16499988-16500007 | None:intergenic | 50.0% | |
| CAACATGTCAGTCTCGTGAC+TGG | + | chr4.1:16496348-16496367 | None:intergenic | 50.0% | |
| CCCGCAACAAAGTCCTCAAA+AGG | + | chr4.1:16499995-16500014 | None:intergenic | 50.0% | |
| CTTCTGTTGCCAGGATGCTT+TGG | - | chr4.1:16496948-16496967 | MS.gene08318:intron | 50.0% | |
| GAAGGATGTCGAATGCAAGC+CGG | - | chr4.1:16497254-16497273 | MS.gene08318:intron | 50.0% | |
| GAATTGGCATGAGAACCAGC+CGG | + | chr4.1:16497276-16497295 | None:intergenic | 50.0% | |
| GACAATGTGGATTTGCCTCC+GGG | - | chr4.1:16497207-16497226 | MS.gene08318:intron | 50.0% | |
| GCACTTGAAGATCCTGACGA+TGG | - | chr4.1:16497120-16497139 | MS.gene08318:intron | 50.0% | |
| GCCACGTACCTAAGAGACTA+AGG | + | chr4.1:16498255-16498274 | None:intergenic | 50.0% | |
| GCCTTAGTCTCTTAGGTACG+TGG | - | chr4.1:16498251-16498270 | MS.gene08318:intron | 50.0% | |
| GGAAGGGTTCTCCACATGTT+TGG | - | chr4.1:16499587-16499606 | MS.gene08318:intron | 50.0% | |
| GGGAGAGTTTACTGCCCATT+TGG | - | chr4.1:16496663-16496682 | MS.gene08318:intron | 50.0% | |
| GTCGGAGAATCATCTGGTAG+TGG | - | chr4.1:16496997-16497016 | MS.gene08318:intron | 50.0% | |
| GTTTAAGGGATGCTTGGAGG+TGG | - | chr4.1:16499507-16499526 | MS.gene08318:intron | 50.0% | |
| TACATACCGGTGGAACTGCA+GGG | + | chr4.1:16498095-16498114 | None:intergenic | 50.0% | |
| TCAGTATGTTCCTCGCCCTT+AGG | + | chr4.1:16500027-16500046 | None:intergenic | 50.0% | |
| TGCGTTTAAGGGATGCTTGG+AGG | - | chr4.1:16499504-16499523 | MS.gene08318:intron | 50.0% | |
| TGCTGCTGCTACTGCTAACT+TGG | - | chr4.1:16500261-16500280 | MS.gene08318:CDS | 50.0% | |
| TGGTTAGGTTAGGTGGCTGA+TGG | - | chr4.1:16499186-16499205 | MS.gene08318:intron | 50.0% | |
| TTGACGACGACGCCAGAATT+GGG | + | chr4.1:16495865-16495884 | None:intergenic | 50.0% | |
| ! | AAAGTACCCTGCAGTTCCAC+CGG | - | chr4.1:16498086-16498105 | MS.gene08318:CDS | 50.0% |
| ! | ACTGAGGGCCTGTTTGGTTT+AGG | + | chr4.1:16498855-16498874 | None:intergenic | 50.0% |
| !! | GCAGTCTGTGGAGCCATTTT+TGG | + | chr4.1:16500203-16500222 | None:intergenic | 50.0% |
| ACTAATCCCCTCGAGCCTTG+TGG | + | chr4.1:16496692-16496711 | None:intergenic | 55.0% | |
| ACTACCACTCAGGTGGCTTG+AGG | - | chr4.1:16498194-16498213 | MS.gene08318:intron | 55.0% | |
| CAATGTGGATTTGCCTCCGG+GGG | - | chr4.1:16497209-16497228 | MS.gene08318:intron | 55.0% | |
| CCTCAAAAGGCTGCAGGTGA+AGG | + | chr4.1:16499982-16500001 | None:intergenic | 55.0% | |
| CTAGGCACTCCCTACCATGA+CGG | - | chr4.1:16498033-16498052 | MS.gene08318:intron | 55.0% | |
| CTTGACGACGACGCCAGAAT+TGG | + | chr4.1:16495866-16495885 | None:intergenic | 55.0% | |
| GACGCCAGAATTGGGGGAAT+CGG | + | chr4.1:16495857-16495876 | None:intergenic | 55.0% | |
| GATGCTTTGGTCCCTGGTCA+TGG | - | chr4.1:16496961-16496980 | MS.gene08318:intron | 55.0% | |
| GCTGTCATCGTTGGACCTCT+AGG | - | chr4.1:16498015-16498034 | MS.gene08318:intron | 55.0% | |
| GTATGTTCCTCGCCCTTAGG+CGG | + | chr4.1:16500024-16500043 | None:intergenic | 55.0% | |
| GTCTTTGCACTTGCGTGTGG+AGG | - | chr4.1:16496710-16496729 | MS.gene08318:intron | 55.0% | |
| TGACGACGACGCCAGAATTG+GGG | + | chr4.1:16495864-16495883 | None:intergenic | 55.0% | |
| TGAGGGGCAAAGGAGATCCA+AGG | - | chr4.1:16498408-16498427 | MS.gene08318:intron | 55.0% | |
| TTAGCCTCAAGCCACCTGAG+TGG | + | chr4.1:16498201-16498220 | None:intergenic | 55.0% | |
| ! | ATCGTGCTGATGAGGGGCAA+AGG | - | chr4.1:16498398-16498417 | MS.gene08318:intron | 55.0% |
| ! | CCTTCACCTGCAGCCTTTTG+AGG | - | chr4.1:16499979-16499998 | MS.gene08318:intron | 55.0% |
| ! | CTAATCCCCTCGAGCCTTGT+GGG | + | chr4.1:16496691-16496710 | None:intergenic | 55.0% |
| ! | GAGCCTTGTGGGACCCAAAT+GGG | + | chr4.1:16496680-16496699 | None:intergenic | 55.0% |
| ! | GGAACTGCAGGGTACTTTGC+AGG | + | chr4.1:16498084-16498103 | None:intergenic | 55.0% |
| !! | CATGCCGATTCCCCCAATTC+TGG | - | chr4.1:16495850-16495869 | MS.gene08318:CDS | 55.0% |
| !! | GGGTAGAAGCATCAGTGCCT+TGG | - | chr4.1:16497229-16497248 | MS.gene08318:intron | 55.0% |
| !! | TCATGGTAGGGAGTGCCTAG+AGG | + | chr4.1:16498033-16498052 | None:intergenic | 55.0% |
| ACTGATGCTTCTACCCCCGG+AGG | + | chr4.1:16497225-16497244 | None:intergenic | 60.0% | |
| CTGCCCATTTGGGTCCCACA+AGG | - | chr4.1:16496674-16496693 | MS.gene08318:intron | 60.0% | |
| GACGACGACGCCAGAATTGG+GGG | + | chr4.1:16495863-16495882 | None:intergenic | 60.0% | |
| GATGTCGAATGCAAGCCGGC+TGG | - | chr4.1:16497258-16497277 | MS.gene08318:intron | 60.0% | |
| TATGCTGAGGGGGGACCAGT+TGG | - | chr4.1:16500061-16500080 | MS.gene08318:intron | 60.0% | |
| TGCCAGGATGCTTTGGTCCC+TGG | - | chr4.1:16496955-16496974 | MS.gene08318:intron | 60.0% | |
| TGCGGGACACTTCCGCCTAA+GGG | - | chr4.1:16500009-16500028 | MS.gene08318:intron | 60.0% | |
| TGCTTCAGCCGCAGAGACAC+AGG | - | chr4.1:16497416-16497435 | MS.gene08318:intron | 60.0% | |
| TTGCGGGACACTTCCGCCTA+AGG | - | chr4.1:16500008-16500027 | MS.gene08318:intron | 60.0% | |
| TTGGGTCCCACAAGGCTCGA+GGG | - | chr4.1:16496682-16496701 | MS.gene08318:intron | 60.0% | |
| TTTGGGTCCCACAAGGCTCG+AGG | - | chr4.1:16496681-16496700 | MS.gene08318:intron | 60.0% | |
| ! | CGAGCCTTGTGGGACCCAAA+TGG | + | chr4.1:16496681-16496700 | None:intergenic | 60.0% |
| ! | GACCAGGGACCAAAGCATCC+TGG | + | chr4.1:16496960-16496979 | None:intergenic | 60.0% |
| !! | GGCACTGATGCTTCTACCCC+CGG | + | chr4.1:16497228-16497247 | None:intergenic | 60.0% |
| GACACTTCCGCCTAAGGGCG+AGG | - | chr4.1:16500014-16500033 | MS.gene08318:intron | 65.0% | |
| TGGGTCCCACAAGGCTCGAG+GGG | - | chr4.1:16496683-16496702 | MS.gene08318:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 16495835 | 16500324 | 16495835 | ID=MS.gene08318 |
| chr4.1 | mRNA | 16495835 | 16500324 | 16495835 | ID=MS.gene08318.t1;Parent=MS.gene08318 |
| chr4.1 | exon | 16500250 | 16500324 | 16500250 | ID=MS.gene08318.t1.exon1;Parent=MS.gene08318.t1 |
| chr4.1 | CDS | 16500250 | 16500324 | 16500250 | ID=cds.MS.gene08318.t1;Parent=MS.gene08318.t1 |
| chr4.1 | exon | 16498722 | 16499198 | 16498722 | ID=MS.gene08318.t1.exon2;Parent=MS.gene08318.t1 |
| chr4.1 | CDS | 16498722 | 16499198 | 16498722 | ID=cds.MS.gene08318.t1;Parent=MS.gene08318.t1 |
| chr4.1 | exon | 16498556 | 16498619 | 16498556 | ID=MS.gene08318.t1.exon3;Parent=MS.gene08318.t1 |
| chr4.1 | CDS | 16498556 | 16498619 | 16498556 | ID=cds.MS.gene08318.t1;Parent=MS.gene08318.t1 |
| chr4.1 | exon | 16498052 | 16498191 | 16498052 | ID=MS.gene08318.t1.exon4;Parent=MS.gene08318.t1 |
| chr4.1 | CDS | 16498052 | 16498191 | 16498052 | ID=cds.MS.gene08318.t1;Parent=MS.gene08318.t1 |
| chr4.1 | exon | 16497661 | 16497972 | 16497661 | ID=MS.gene08318.t1.exon5;Parent=MS.gene08318.t1 |
| chr4.1 | CDS | 16497661 | 16497972 | 16497661 | ID=cds.MS.gene08318.t1;Parent=MS.gene08318.t1 |
| chr4.1 | exon | 16495835 | 16496167 | 16495835 | ID=MS.gene08318.t1.exon6;Parent=MS.gene08318.t1 |
| chr4.1 | CDS | 16495835 | 16496167 | 16495835 | ID=cds.MS.gene08318.t1;Parent=MS.gene08318.t1 |
| Gene Sequence |
| Protein sequence |
