Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08672.t1 | XP_013455978.1 | 97.4 | 688 | 18 | 0 | 8 | 695 | 51 | 738 | 0.00E+00 | 1262.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08672.t1 | Q9FJH9 | 61.7 | 716 | 224 | 16 | 8 | 693 | 43 | 738 | 1.1e-212 | 741.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08672.t1 | A0A072UJT3 | 97.4 | 688 | 18 | 0 | 8 | 695 | 51 | 738 | 0.0e+00 | 1262.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene08672 | MS.gene31244 | PPI |
| MS.gene08672 | MS.gene08736 | PPI |
| MS.gene08672 | MS.gene54024 | PPI |
| MS.gene08672 | MS.gene43869 | PPI |
| MS.gene08672 | MS.gene007701 | PPI |
| MS.gene08672 | MS.gene028673 | PPI |
| MS.gene08672 | MS.gene050097 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08672.t1 | MTR_4g057960 | 97.965 | 688 | 14 | 0 | 8 | 695 | 51 | 738 | 0.0 | 1404 |
| MS.gene08672.t1 | MTR_2g095260 | 76.438 | 713 | 131 | 6 | 8 | 693 | 34 | 736 | 0.0 | 1077 |
| MS.gene08672.t1 | MTR_0372s0010 | 98.069 | 259 | 5 | 0 | 23 | 281 | 1 | 259 | 0.0 | 523 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08672.t1 | AT5G60760 | 62.709 | 716 | 217 | 15 | 8 | 693 | 43 | 738 | 0.0 | 833 |
| MS.gene08672.t1 | AT3G45090 | 62.341 | 709 | 208 | 12 | 8 | 691 | 37 | 711 | 0.0 | 814 |
| MS.gene08672.t1 | AT3G45090 | 60.084 | 714 | 219 | 13 | 10 | 691 | 13 | 692 | 0.0 | 780 |
| MS.gene08672.t1 | AT5G60760 | 63.636 | 550 | 167 | 14 | 156 | 693 | 1 | 529 | 0.0 | 641 |
Find 167 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAGAGTACTCTGCAAATTA+TGG | 0.176634 | 4.4:+45358795 | MS.gene08672:intron |
| TCAGCTGATCCAATCCTTTC+TGG | 0.176923 | 4.4:+45363654 | MS.gene08672:CDS |
| CAAAGCTCGACACGCATTTA+AGG | 0.189656 | 4.4:+45358822 | MS.gene08672:CDS |
| TAAGGAATTGGTCGAGATTT+TGG | 0.226708 | 4.4:-45363470 | None:intergenic |
| CTTAGGAAACCAATCACTTT+TGG | 0.234643 | 4.4:+45360476 | MS.gene08672:CDS |
| AAAGGCTTGGCCTGTAAATT+TGG | 0.250814 | 4.4:+45362222 | MS.gene08672:CDS |
| GTCTCTGATGTCCGTGTATC+AGG | 0.259296 | 4.4:-45361463 | None:intergenic |
| CCTTCAATAGCCATTTGTTT+TGG | 0.270255 | 4.4:-45361514 | None:intergenic |
| AGGATCCAGTGTCATATATT+TGG | 0.280175 | 4.4:-45361861 | None:intergenic |
| TTACCATCAACCAAATTTAC+AGG | 0.301261 | 4.4:-45362232 | None:intergenic |
| CCTGGATTGTTCTGATGTTT+CGG | 0.307423 | 4.4:-45361910 | None:intergenic |
| TCTTGAGATGCCACTGCTAT+TGG | 0.314852 | 4.4:-45363513 | None:intergenic |
| ATCGACGTTGTCTGCAATAC+TGG | 0.334451 | 4.4:+45361068 | MS.gene08672:CDS |
| TCTCTTAGTATTCCTGCATT+AGG | 0.338277 | 4.4:+45363621 | MS.gene08672:CDS |
| AACATTTGTATTGTTTACTT+TGG | 0.338326 | 4.4:-45361969 | None:intergenic |
| CCGGCTCACTTCTAGTTCTA+AGG | 0.341207 | 4.4:-45363488 | None:intergenic |
| ACATTTGTATTGTTTACTTT+GGG | 0.342228 | 4.4:-45361968 | None:intergenic |
| TGTGGTGTAGGACCGGAAAA+TGG | 0.343107 | 4.4:+45362268 | MS.gene08672:CDS |
| ACTTCTCATCATGTGCCTAA+TGG | 0.343567 | 4.4:-45361266 | None:intergenic |
| AATGGCTATTGAAGGATATA+AGG | 0.348561 | 4.4:+45361522 | MS.gene08672:CDS |
| AATTTGGATTTGCCATTTGA+TGG | 0.349604 | 4.4:-45363588 | None:intergenic |
| CACTTCTAGTTCTAAGGAAT+TGG | 0.350027 | 4.4:-45363482 | None:intergenic |
| TCCTTTCGAGCTCAAAGAAT+TGG | 0.363392 | 4.4:-45362125 | None:intergenic |
| CAGAGTACTCTGCAAATTAT+GGG | 0.368373 | 4.4:+45358796 | MS.gene08672:intron |
| ATGGAAGATGTGTTAGAAAA+TGG | 0.369556 | 4.4:+45363363 | MS.gene08672:CDS |
| ACTGTTACAGTATTTCTAAC+AGG | 0.370366 | 4.4:-45362070 | None:intergenic |
| ATGTGTTAGAAAATGGTTAT+TGG | 0.381979 | 4.4:+45363370 | MS.gene08672:CDS |
| CTACCATGCAGGCGAGTGTT+TGG | 0.385707 | 4.4:+45361330 | MS.gene08672:CDS |
| TCACTTCAGGGTAGCAGATT+GGG | 0.389416 | 4.4:+45361217 | MS.gene08672:intron |
| TAAATTTGGTTGATGGTAAT+GGG | 0.393794 | 4.4:+45362236 | MS.gene08672:CDS |
| TTCCGGTCCTACACCACATA+TGG | 0.401890 | 4.4:-45362263 | None:intergenic |
| TTCACTTCAGGGTAGCAGAT+TGG | 0.403232 | 4.4:+45361216 | MS.gene08672:intron |
| GTCTTCGAAGGCGTGAAGCT+GGG | 0.404425 | 4.4:+45362032 | MS.gene08672:CDS |
| AAACCAAACTGAAGATTTAC+CGG | 0.405059 | 4.4:-45362337 | None:intergenic |
| TATCCTTACCCAAAAGTGAT+TGG | 0.407568 | 4.4:-45360485 | None:intergenic |
| CAAAGAAGAATAAGCGCAAA+AGG | 0.410927 | 4.4:-45363538 | None:intergenic |
| GTAGCTCAAAGAAGAGTTCT+CGG | 0.414538 | 4.4:+45362749 | MS.gene08672:intron |
| TGGCCTGTAAATTTGGTTGA+TGG | 0.418803 | 4.4:+45362229 | MS.gene08672:CDS |
| AGATATTGTATGTGATGCTT+TGG | 0.419440 | 4.4:+45360581 | MS.gene08672:CDS |
| TGTCTTCGAAGGCGTGAAGC+TGG | 0.422623 | 4.4:+45362031 | MS.gene08672:CDS |
| TACTGTAACAGTTGTTTATG+AGG | 0.423133 | 4.4:+45362081 | MS.gene08672:CDS |
| TTCGCTTCAGCAACAGCAAC+CGG | 0.424480 | 4.4:-45361355 | None:intergenic |
| AAGCTTGATGTTGTGGAGCT+TGG | 0.424880 | 4.4:+45363420 | MS.gene08672:CDS |
| GGCGCACTTCAGTATTTGTT+CGG | 0.424912 | 4.4:+45360544 | MS.gene08672:CDS |
| GTAAATTTGGTTGATGGTAA+TGG | 0.425265 | 4.4:+45362235 | MS.gene08672:CDS |
| GAGCCGGTAAATCTTCAGTT+TGG | 0.432586 | 4.4:+45362334 | MS.gene08672:CDS |
| TCTCAGACTTCGTGAAAAGA+AGG | 0.434618 | 4.4:+45361002 | MS.gene08672:intron |
| TTCTAACAGGATCGTATAGT+TGG | 0.437973 | 4.4:-45362057 | None:intergenic |
| TACGCGTGCTGAAAAGCATT+TGG | 0.443910 | 4.4:+45361943 | MS.gene08672:CDS |
| TTTCAGTTGATTCAGAGAAA+AGG | 0.456688 | 4.4:+45362151 | MS.gene08672:CDS |
| TCTAGAGAAACTGCTGCATC+AGG | 0.458514 | 4.4:-45360450 | None:intergenic |
| TCGTATCAACGGATTCCATT+AGG | 0.462567 | 4.4:+45361251 | MS.gene08672:CDS |
| ACCATCAGTTGCTTCATCCT+TGG | 0.465058 | 4.4:-45361425 | None:intergenic |
| TTCAAACTAACCTCCTTAGC+GGG | 0.466416 | 4.4:-45362508 | None:intergenic |
| TGCAGGCGAGTGTTTGGATC+CGG | 0.468493 | 4.4:+45361336 | MS.gene08672:CDS |
| AATAATCATGGTGGTGGTGG+TGG | 0.470078 | 4.4:+45358661 | None:intergenic |
| TTTGGCCGAGTACAAGTACT+TGG | 0.471055 | 4.4:+45360599 | MS.gene08672:CDS |
| TTGATAGGCTAATCACTGCC+TGG | 0.475376 | 4.4:+45361572 | MS.gene08672:CDS |
| GCAGTTTCTCTAGAAGACTT+AGG | 0.478613 | 4.4:+45360459 | MS.gene08672:CDS |
| ACCAAGTCTGCTCTCTGGTT+AGG | 0.481466 | 4.4:-45360624 | None:intergenic |
| TGGTGATTGACAGTCTTGAT+AGG | 0.483565 | 4.4:+45361557 | MS.gene08672:CDS |
| TACAGATGGGTCCGTGGCAA+AGG | 0.486347 | 4.4:+45362204 | MS.gene08672:CDS |
| ATGAATAATCATGGTGGTGG+TGG | 0.486953 | 4.4:+45358658 | None:intergenic |
| TCCTAACCAGAGAGCAGACT+TGG | 0.487241 | 4.4:+45360623 | MS.gene08672:CDS |
| CCAAAACAAATGGCTATTGA+AGG | 0.492478 | 4.4:+45361514 | MS.gene08672:CDS |
| CAATCCTCTTATCAATCCTC+TGG | 0.493200 | 4.4:+45362457 | MS.gene08672:CDS |
| ATGGCTATAGTTAATACAGA+TGG | 0.493983 | 4.4:+45362190 | MS.gene08672:CDS |
| GGTATCAGTCCCATCAGCTC+TGG | 0.496720 | 4.4:-45362422 | None:intergenic |
| GTCCATATGTGGTGTAGGAC+CGG | 0.496890 | 4.4:+45362261 | MS.gene08672:CDS |
| GAGAAGAAACTACCATCAAA+TGG | 0.497750 | 4.4:+45363576 | MS.gene08672:CDS |
| GAAGGAAAACCCCTTGTTGT+GGG | 0.499021 | 4.4:+45361300 | MS.gene08672:CDS |
| CTCTGCTTTACCAATCCGTA+AGG | 0.499701 | 4.4:-45362314 | None:intergenic |
| AGAGCTGATGGGACTGATAC+CGG | 0.500641 | 4.4:+45362424 | MS.gene08672:CDS |
| TGAGGAGCACCAGAAAGGAT+TGG | 0.505269 | 4.4:-45363663 | None:intergenic |
| GCCAATTCTTTGAGCTCGAA+AGG | 0.506088 | 4.4:+45362124 | MS.gene08672:CDS |
| ATGGGTCCGTGGCAAAGGCT+TGG | 0.507315 | 4.4:+45362209 | MS.gene08672:CDS |
| GGAATCGGACATCCAATGTA+TGG | 0.507413 | 4.4:+45362289 | MS.gene08672:CDS |
| TTTGGCGGTATTTAATCCCA+TGG | 0.507498 | 4.4:-45363452 | None:intergenic |
| CTAGAACCAAGTCTGCTCTC+TGG | 0.513854 | 4.4:-45360629 | None:intergenic |
| AAAGACTAAGCTTGATGTTG+TGG | 0.518975 | 4.4:+45363413 | MS.gene08672:CDS |
| GCGGGGAAATCTGATAGCCT+AGG | 0.519195 | 4.4:-45362490 | None:intergenic |
| ATCCAATGTATGGTCCCTTA+CGG | 0.519383 | 4.4:+45362299 | MS.gene08672:CDS |
| TTTGTAATGTAGATCATGAA+TGG | 0.519888 | 4.4:-45361803 | None:intergenic |
| GAGCTTGGAGCTAAAATCCA+TGG | 0.522387 | 4.4:+45363435 | MS.gene08672:CDS |
| AGAATACCCTACTACCTTTG+AGG | 0.524401 | 4.4:-45363681 | None:intergenic |
| CCGAAACATCAGAACAATCC+AGG | 0.525705 | 4.4:+45361910 | MS.gene08672:CDS |
| GCATCCAAGTCCAAAACAAA+TGG | 0.525984 | 4.4:+45361504 | MS.gene08672:CDS |
| TCTTCGAAGGCGTGAAGCTG+GGG | 0.527424 | 4.4:+45362033 | MS.gene08672:CDS |
| CGGGGAAATCTGATAGCCTA+GGG | 0.528419 | 4.4:-45362489 | None:intergenic |
| TCCTTTCTGGTGCTCCTCAA+AGG | 0.529005 | 4.4:+45363667 | MS.gene08672:CDS |
| CAGACTTGGTTCTAGCCTGC+AGG | 0.535130 | 4.4:+45360637 | MS.gene08672:CDS |
| GAAGCACTTGGAAAGATTTG+CGG | 0.537614 | 4.4:+45361832 | MS.gene08672:CDS |
| TACCATTCGAGTTGTACAAA+AGG | 0.538198 | 4.4:+45360523 | MS.gene08672:CDS |
| GTTGACGAGTCCAGAGCTGA+TGG | 0.539133 | 4.4:+45362412 | MS.gene08672:CDS |
| CAAACACTCGCCTGCATGGT+AGG | 0.540726 | 4.4:-45361329 | None:intergenic |
| ACCTTTGAGGAGCACCAGAA+AGG | 0.550376 | 4.4:-45363668 | None:intergenic |
| TTATGTGGCACTAGTGGATG+TGG | 0.554299 | 4.4:+45361042 | MS.gene08672:CDS |
| GATTGATGATCAACTAGATG+TGG | 0.555052 | 4.4:+45362791 | MS.gene08672:CDS |
| ACAGCCAGAGGATTGATAAG+AGG | 0.556047 | 4.4:-45362461 | None:intergenic |
| GATGGTGGCACTAGTTATGC+GGG | 0.557473 | 4.4:+45362385 | MS.gene08672:CDS |
| CATGATCTACATTACAAATG+AGG | 0.561065 | 4.4:+45361808 | MS.gene08672:CDS |
| CACGCGTACAGAGATAATCC+TGG | 0.561557 | 4.4:-45361928 | None:intergenic |
| GTAGGACCGGAAAATGGAAT+CGG | 0.563314 | 4.4:+45362274 | MS.gene08672:CDS |
| GCTGAAAACAGTTGCATGGA+TGG | 0.566240 | 4.4:-45362008 | None:intergenic |
| ATCCGTAAGGGACCATACAT+TGG | 0.569972 | 4.4:-45362301 | None:intergenic |
| ACGGATTGGTAAAGCAGAGC+CGG | 0.571763 | 4.4:+45362318 | MS.gene08672:CDS |
| ATCAGTGCCTGGCCTAGTGA+TGG | 0.571946 | 4.4:+45362367 | MS.gene08672:CDS |
| GGGAAGTCCATATGTGGTGT+AGG | 0.572907 | 4.4:+45362256 | MS.gene08672:CDS |
| GACAGCTGAAAACAGTTGCA+TGG | 0.576375 | 4.4:-45362012 | None:intergenic |
| AAAGAAGAGTTCTCGGTGCA+TGG | 0.576983 | 4.4:+45362756 | MS.gene08672:CDS |
| AGTGCCACCATCACTAGGCC+AGG | 0.578588 | 4.4:-45362374 | None:intergenic |
| CCTTAGAACTAGAAGTGAGC+CGG | 0.578935 | 4.4:+45363488 | MS.gene08672:CDS |
| AAAGAAGAATAAGCGCAAAA+GGG | 0.582519 | 4.4:-45363537 | None:intergenic |
| AGAAGGAAAACCCCTTGTTG+TGG | 0.582553 | 4.4:+45361299 | MS.gene08672:CDS |
| ATGTATGGTCCCTTACGGAT+TGG | 0.583095 | 4.4:+45362304 | MS.gene08672:CDS |
| GGTTGCTGTTGCTGAAGCGA+AGG | 0.584164 | 4.4:+45361357 | MS.gene08672:CDS |
| GTTCTGTTATGTGGCACTAG+TGG | 0.587090 | 4.4:+45361036 | MS.gene08672:CDS |
| TACAAATGAGGAGAAGCACT+TGG | 0.587731 | 4.4:+45361820 | MS.gene08672:CDS |
| AAAACAATCTGTTGTTGTCG+AGG | 0.590052 | 4.4:+45361603 | MS.gene08672:CDS |
| GCTATCAGATTTCCCCGCTA+AGG | 0.590565 | 4.4:+45362495 | MS.gene08672:CDS |
| TGATAGGCTAATCACTGCCT+GGG | 0.593492 | 4.4:+45361573 | MS.gene08672:CDS |
| GTTCAAACTAACCTCCTTAG+CGG | 0.594081 | 4.4:-45362509 | None:intergenic |
| AGGTTCTTCAAGAAATCTGA+TGG | 0.595494 | 4.4:+45362171 | MS.gene08672:CDS |
| ATCATGAATGGTATGATCGA+CGG | 0.597222 | 4.4:-45361791 | None:intergenic |
| CCTCTGGCTGTAGCTCCCCT+AGG | 0.597493 | 4.4:+45362473 | MS.gene08672:CDS |
| TGGGCTTCTACCTACCATGC+AGG | 0.598830 | 4.4:+45361319 | MS.gene08672:CDS |
| ATACAACAAAGTTGAGACTC+AGG | 0.600306 | 4.4:-45361633 | None:intergenic |
| GATCCAAACACTCGCCTGCA+TGG | 0.600442 | 4.4:-45361333 | None:intergenic |
| AGGTAGAAGCCCACAACAAG+GGG | 0.602197 | 4.4:-45361309 | None:intergenic |
| TAACTAGTGCCACCATCACT+AGG | 0.602739 | 4.4:-45362379 | None:intergenic |
| TGGCTATAGTTAATACAGAT+GGG | 0.604661 | 4.4:+45362191 | MS.gene08672:CDS |
| ATATAAGGCGCAGAGTGAGA+TGG | 0.606811 | 4.4:+45361537 | MS.gene08672:CDS |
| ATGCTCAGTAGCACAAGAGC+CGG | 0.609536 | 4.4:-45361485 | None:intergenic |
| AGCTTGGAGCTAAAATCCAT+GGG | 0.613339 | 4.4:+45363436 | MS.gene08672:CDS |
| TTGGCCGAGTACAAGTACTT+GGG | 0.614702 | 4.4:+45360600 | MS.gene08672:CDS |
| AGAGGATTGATATCTACTGC+CGG | 0.614754 | 4.4:-45362443 | None:intergenic |
| TCTGTGACAGTTCTGTTATG+TGG | 0.615258 | 4.4:+45361027 | MS.gene08672:CDS |
| ACTAGATGTGGGTAGTGATG+AGG | 0.619136 | 4.4:+45362803 | MS.gene08672:CDS |
| AAACAATCTGTTGTTGTCGA+GGG | 0.619927 | 4.4:+45361604 | MS.gene08672:CDS |
| TGATGGTGGCACTAGTTATG+CGG | 0.626485 | 4.4:+45362384 | MS.gene08672:CDS |
| ATTGATGATCAACTAGATGT+GGG | 0.626575 | 4.4:+45362792 | MS.gene08672:CDS |
| AATATGAATAATCATGGTGG+TGG | 0.627156 | 4.4:+45358655 | None:intergenic |
| GATGCCACTGCTATTGGCAC+CGG | 0.627411 | 4.4:-45363507 | None:intergenic |
| TAGGTAGAAGCCCACAACAA+GGG | 0.628255 | 4.4:-45361310 | None:intergenic |
| TACAGGCCAAGCCTTTGCCA+CGG | 0.633998 | 4.4:-45362215 | None:intergenic |
| TTGACGAGTCCAGAGCTGAT+GGG | 0.638185 | 4.4:+45362413 | MS.gene08672:CDS |
| ACCAAGGATGAAGCAACTGA+TGG | 0.638325 | 4.4:+45361424 | MS.gene08672:CDS |
| ATCAGATTTCCCCGCTAAGG+AGG | 0.638995 | 4.4:+45362498 | MS.gene08672:CDS |
| GCGTGCCAAATATATGACAC+TGG | 0.639092 | 4.4:+45361856 | MS.gene08672:CDS |
| AGAGTACGATGATCTTGCAA+TGG | 0.640744 | 4.4:+45363344 | MS.gene08672:CDS |
| GATACACGGACATCAGAGAC+CGG | 0.644283 | 4.4:+45361466 | MS.gene08672:CDS |
| GTTAGAAAATGGTTATTGGT+CGG | 0.644580 | 4.4:+45363374 | MS.gene08672:CDS |
| AATCACGACAGTCGTATCAA+CGG | 0.646353 | 4.4:+45361240 | MS.gene08672:CDS |
| AGGACCCAAGTACTTGTACT+CGG | 0.651459 | 4.4:-45360604 | None:intergenic |
| AGTGCCTGGCCTAGTGATGG+TGG | 0.651998 | 4.4:+45362370 | MS.gene08672:CDS |
| AGTTAATACAGATGGGTCCG+TGG | 0.655595 | 4.4:+45362198 | MS.gene08672:CDS |
| TCTGCTTTACCAATCCGTAA+GGG | 0.661809 | 4.4:-45362313 | None:intergenic |
| TGAGCCGGTGCCAATAGCAG+TGG | 0.663796 | 4.4:+45363503 | MS.gene08672:CDS |
| GTAGGTAGAAGCCCACAACA+AGG | 0.664341 | 4.4:-45361311 | None:intergenic |
| CCTAGGGGAGCTACAGCCAG+AGG | 0.671608 | 4.4:-45362473 | None:intergenic |
| TCAAACTAACCTCCTTAGCG+GGG | 0.679239 | 4.4:-45362507 | None:intergenic |
| TGACAAAGAAGTCGACGATG+AGG | 0.682268 | 4.4:+45362842 | MS.gene08672:CDS |
| TGTGTCACAATCACTTACCA+AGG | 0.687646 | 4.4:+45361408 | MS.gene08672:CDS |
| GGTAATGGGAAGTCCATATG+TGG | 0.693536 | 4.4:+45362250 | MS.gene08672:CDS |
| ATTCTAGCAAACCTGATACA+CGG | 0.700620 | 4.4:+45361452 | MS.gene08672:CDS |
| GCAGGTTGGATCTGTAGACG+AGG | 0.715067 | 4.4:+45363302 | MS.gene08672:intron |
| GGGGAAATCTGATAGCCTAG+GGG | 0.786166 | 4.4:-45362488 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAAAAAAACGAAATAA+AGG | - | chr4.4:45359506-45359525 | None:intergenic | 10.0% |
| !!! | AGATTTTTTATTTTGTTTAA+AGG | + | chr4.4:45358948-45358967 | MS.gene08672:intron | 10.0% |
| !! | AAATCTGAAAAAAAAGAAAA+TGG | - | chr4.4:45360377-45360396 | None:intergenic | 15.0% |
| !! | AAATTCAGTAAAAAAAGAAA+AGG | - | chr4.4:45359244-45359263 | None:intergenic | 15.0% |
| !! | GTATTTATTTGATTATGAAA+AGG | + | chr4.4:45359920-45359939 | MS.gene08672:intron | 15.0% |
| !! | TCAAATTATTAGATCAATAT+AGG | - | chr4.4:45360691-45360710 | None:intergenic | 15.0% |
| !!! | GTTTTTTTTTTATTTTGACT+AGG | + | chr4.4:45359513-45359532 | MS.gene08672:intron | 15.0% |
| !!! | TGAATTTGATATGAATTTTA+TGG | + | chr4.4:45359257-45359276 | MS.gene08672:intron | 15.0% |
| !!! | TTATTTATATTTTCACTTCA+GGG | + | chr4.4:45361205-45361224 | MS.gene08672:intron | 15.0% |
| !!! | TTGTTATTTAATATTCTTCT+GGG | + | chr4.4:45359446-45359465 | MS.gene08672:intron | 15.0% |
| !!! | TTTATTTATATTTTCACTTC+AGG | + | chr4.4:45361204-45361223 | MS.gene08672:intron | 15.0% |
| !!! | TTTGTTATTTAATATTCTTC+TGG | + | chr4.4:45359445-45359464 | MS.gene08672:intron | 15.0% |
| !! | AACATTTGTATTGTTTACTT+TGG | - | chr4.4:45361972-45361991 | None:intergenic | 20.0% |
| !! | ACATTTGTATTGTTTACTTT+GGG | - | chr4.4:45361971-45361990 | None:intergenic | 20.0% |
| !! | AGAAAGAAAAAAAATAACGA+AGG | - | chr4.4:45361679-45361698 | None:intergenic | 20.0% |
| !!! | AATGTTTAAGATTTATGTTC+AGG | + | chr4.4:45359287-45359306 | MS.gene08672:intron | 20.0% |
| !!! | TCTAGTTTTTACTTATTTTG+CGG | + | chr4.4:45361120-45361139 | MS.gene08672:intron | 20.0% |
| ! | AAATAACAAAACCAAACAAC+AGG | - | chr4.4:45359435-45359454 | None:intergenic | 25.0% |
| ! | AATATCACATTCTATAGTTG+CGG | - | chr4.4:45360042-45360061 | None:intergenic | 25.0% |
| ! | AATGGAATAATGTATTGTAG+TGG | + | chr4.4:45359894-45359913 | MS.gene08672:intron | 25.0% |
| ! | AGATTATTATTGTTAGTGAC+TGG | - | chr4.4:45361736-45361755 | None:intergenic | 25.0% |
| ! | ATGTGTTAGAAAATGGTTAT+TGG | + | chr4.4:45363370-45363389 | MS.gene08672:CDS | 25.0% |
| ! | CAAAAAGAAAGCAAAAAAGA+TGG | + | chr4.4:45361381-45361400 | MS.gene08672:CDS | 25.0% |
| ! | CCTCATAAAAATTCATAACA+TGG | - | chr4.4:45359974-45359993 | None:intergenic | 25.0% |
| ! | TAATAATTTGAATAGAAGCG+AGG | + | chr4.4:45360700-45360719 | MS.gene08672:intron | 25.0% |
| ! | TACATACAAACATTTCATCT+AGG | - | chr4.4:45362902-45362921 | None:intergenic | 25.0% |
| ! | TTTGTAATGTAGATCATGAA+TGG | - | chr4.4:45361806-45361825 | None:intergenic | 25.0% |
| ! | TTTGTGTTCAACATTAAACT+GGG | + | chr4.4:45362545-45362564 | MS.gene08672:intron | 25.0% |
| !! | AAGAGAACGTTTTCTTAATT+TGG | - | chr4.4:45363607-45363626 | None:intergenic | 25.0% |
| !! | ACATTTTATCGTATCTTTAC+TGG | + | chr4.4:45360664-45360683 | MS.gene08672:intron | 25.0% |
| !! | ATAGACTAATTTGAAGTTCT+TGG | + | chr4.4:45360242-45360261 | MS.gene08672:intron | 25.0% |
| !! | ATTTGAAGTTCTTGGTTATT+TGG | + | chr4.4:45360250-45360269 | MS.gene08672:intron | 25.0% |
| !! | CATTTTATCGTATCTTTACT+GGG | + | chr4.4:45360665-45360684 | MS.gene08672:intron | 25.0% |
| !! | CCATGTTATGAATTTTTATG+AGG | + | chr4.4:45359971-45359990 | MS.gene08672:intron | 25.0% |
| !! | GATAATAAGACTAGTTATTG+CGG | + | chr4.4:45360106-45360125 | MS.gene08672:intron | 25.0% |
| !! | GATCTTATTTATTTAGCTCA+AGG | + | chr4.4:45362682-45362701 | MS.gene08672:intron | 25.0% |
| !! | GTTTTTATTACATAGATGAC+CGG | + | chr4.4:45359404-45359423 | MS.gene08672:intron | 25.0% |
| !! | TTATGAATTTTTATGAGGCA+CGG | + | chr4.4:45359976-45359995 | MS.gene08672:intron | 25.0% |
| !! | TTTTGTGTTCAACATTAAAC+TGG | + | chr4.4:45362544-45362563 | MS.gene08672:intron | 25.0% |
| !!! | AATCTTCAGTTTGGTTTTTA+TGG | + | chr4.4:45362343-45362362 | MS.gene08672:CDS | 25.0% |
| !!! | CATCTTTTTTGCTTTCTTTT+TGG | - | chr4.4:45361383-45361402 | None:intergenic | 25.0% |
| !!! | GTAGATTTTTGGTTTTATGT+TGG | + | chr4.4:45362864-45362883 | MS.gene08672:intron | 25.0% |
| !!! | TAAATTTGGTTGATGGTAAT+GGG | + | chr4.4:45362236-45362255 | MS.gene08672:CDS | 25.0% |
| !!! | TTTTGAGGACTTTTTGTTTT+TGG | + | chr4.4:45359379-45359398 | MS.gene08672:intron | 25.0% |
| !!! | TTTTTGTTTTGATTGATCGT+TGG | + | chr4.4:45358880-45358899 | MS.gene08672:intron | 25.0% |
| AAACCAAACTGAAGATTTAC+CGG | - | chr4.4:45362340-45362359 | None:intergenic | 30.0% | |
| AAACCCTTTGAACCATTAAA+GGG | - | chr4.4:45359567-45359586 | None:intergenic | 30.0% | |
| AAAGAAGAATAAGCGCAAAA+GGG | - | chr4.4:45363540-45363559 | None:intergenic | 30.0% | |
| AACAAGAAAAGAGGATAGAT+AGG | - | chr4.4:45362644-45362663 | None:intergenic | 30.0% | |
| AATCTGAATAATCATGCAGA+TGG | + | chr4.4:45361751-45361770 | MS.gene08672:intron | 30.0% | |
| AATGGCTATTGAAGGATATA+AGG | + | chr4.4:45361522-45361541 | MS.gene08672:CDS | 30.0% | |
| ACAAGAAAAGAGGATAGATA+GGG | - | chr4.4:45362643-45362662 | None:intergenic | 30.0% | |
| AGAGTTTCAACTTCAATCTT+TGG | + | chr4.4:45362967-45362986 | MS.gene08672:intron | 30.0% | |
| AGATATTGTATGTGATGCTT+TGG | + | chr4.4:45360581-45360600 | MS.gene08672:CDS | 30.0% | |
| ATCCATGTGATAAAATTTGC+CGG | + | chr4.4:45362939-45362958 | MS.gene08672:intron | 30.0% | |
| ATCTGAATAATCATGCAGAT+GGG | + | chr4.4:45361752-45361771 | MS.gene08672:intron | 30.0% | |
| ATGGAAGATGTGTTAGAAAA+TGG | + | chr4.4:45363363-45363382 | MS.gene08672:CDS | 30.0% | |
| ATGGCTATAGTTAATACAGA+TGG | + | chr4.4:45362190-45362209 | MS.gene08672:CDS | 30.0% | |
| ATTGACAAAGACAAAGACAA+AGG | + | chr4.4:45358739-45358758 | MS.gene08672:intron | 30.0% | |
| CATGATCTACATTACAAATG+AGG | + | chr4.4:45361808-45361827 | MS.gene08672:CDS | 30.0% | |
| CCTGCAAATCAAAATACAAA+AGG | - | chr4.4:45363287-45363306 | None:intergenic | 30.0% | |
| CTATTGTCCATGTAGTATTT+AGG | - | chr4.4:45360007-45360026 | None:intergenic | 30.0% | |
| GAGTTTCAACTTCAATCTTT+GGG | + | chr4.4:45362968-45362987 | MS.gene08672:intron | 30.0% | |
| GCAACAATTACATGAAAGTT+TGG | - | chr4.4:45360828-45360847 | None:intergenic | 30.0% | |
| GTTAGAAAATGGTTATTGGT+CGG | + | chr4.4:45363374-45363393 | MS.gene08672:CDS | 30.0% | |
| GTTATCAATTGGGAATGAAT+TGG | + | chr4.4:45363069-45363088 | MS.gene08672:intron | 30.0% | |
| TACTGTAACAGTTGTTTATG+AGG | + | chr4.4:45362081-45362100 | MS.gene08672:CDS | 30.0% | |
| TGGCTATAGTTAATACAGAT+GGG | + | chr4.4:45362191-45362210 | MS.gene08672:CDS | 30.0% | |
| TTACCATCAACCAAATTTAC+AGG | - | chr4.4:45362235-45362254 | None:intergenic | 30.0% | |
| TTAGTCTAGTGGAAAATTTG+AGG | + | chr4.4:45359326-45359345 | MS.gene08672:intron | 30.0% | |
| ! | AATTTGGATTTGCCATTTGA+TGG | - | chr4.4:45363591-45363610 | None:intergenic | 30.0% |
| ! | ACTGTTACAGTATTTCTAAC+AGG | - | chr4.4:45362073-45362092 | None:intergenic | 30.0% |
| ! | ATTGATGATCAACTAGATGT+GGG | + | chr4.4:45362792-45362811 | MS.gene08672:CDS | 30.0% |
| ! | CAAAAACATATTTCTGACTG+TGG | + | chr4.4:45360723-45360742 | MS.gene08672:intron | 30.0% |
| ! | TAAGATTTATGTTCAGGTTC+TGG | + | chr4.4:45359293-45359312 | MS.gene08672:intron | 30.0% |
| ! | TACAATGAGGTTTTTACTCT+CGG | - | chr4.4:45360308-45360327 | None:intergenic | 30.0% |
| ! | TACTGTTTTCGAAGAGTAAT+CGG | + | chr4.4:45360201-45360220 | MS.gene08672:intron | 30.0% |
| ! | TTTCAGTTGATTCAGAGAAA+AGG | + | chr4.4:45362151-45362170 | MS.gene08672:CDS | 30.0% |
| !! | GATTTTAGGTATTAGTCTAG+TGG | + | chr4.4:45359315-45359334 | MS.gene08672:intron | 30.0% |
| !! | GGTGTTTTTGTTACATTTTG+AGG | + | chr4.4:45359364-45359383 | MS.gene08672:intron | 30.0% |
| !! | GTAAATTTGGTTGATGGTAA+TGG | + | chr4.4:45362235-45362254 | MS.gene08672:CDS | 30.0% |
| !! | TTAGGAAACCAATCACTTTT+GGG | + | chr4.4:45360477-45360496 | MS.gene08672:CDS | 30.0% |
| !!! | AATATTTTAGGATGCATGCT+AGG | + | chr4.4:45360172-45360191 | MS.gene08672:intron | 30.0% |
| !!! | CCTTTTGTATTTTGATTTGC+AGG | + | chr4.4:45363284-45363303 | MS.gene08672:intron | 30.0% |
| !!! | GTTTTTACTTATTTTGCGGT+AGG | + | chr4.4:45361124-45361143 | MS.gene08672:intron | 30.0% |
| !!! | TTCACATACTTGTTTTTAGC+AGG | - | chr4.4:45361884-45361903 | None:intergenic | 30.0% |
| !!! | TTGAGGACAGTTTTTGTTTT+TGG | + | chr4.4:45359343-45359362 | MS.gene08672:intron | 30.0% |
| !!! | TTGTATTTTGATTTGCAGGT+TGG | + | chr4.4:45363288-45363307 | MS.gene08672:intron | 30.0% |
| AAAACAATCTGTTGTTGTCG+AGG | + | chr4.4:45361603-45361622 | MS.gene08672:CDS | 35.0% | |
| AAACAATCTGTTGTTGTCGA+GGG | + | chr4.4:45361604-45361623 | MS.gene08672:CDS | 35.0% | |
| AAAGACTAAGCTTGATGTTG+TGG | + | chr4.4:45363413-45363432 | MS.gene08672:CDS | 35.0% | |
| AACCCTTTGAACCATTAAAG+GGG | - | chr4.4:45359566-45359585 | None:intergenic | 35.0% | |
| AAGAAAGCAAAAAAGATGGC+TGG | + | chr4.4:45361385-45361404 | MS.gene08672:CDS | 35.0% | |
| ACGACTAACAATGTCGTTAT+GGG | - | chr4.4:45359679-45359698 | None:intergenic | 35.0% | |
| ACGATTAGATTGTCTTTCCA+TGG | + | chr4.4:45360787-45360806 | MS.gene08672:intron | 35.0% | |
| AGGATCCAGTGTCATATATT+TGG | - | chr4.4:45361864-45361883 | None:intergenic | 35.0% | |
| AGGTTCTTCAAGAAATCTGA+TGG | + | chr4.4:45362171-45362190 | MS.gene08672:CDS | 35.0% | |
| ATACAACAAAGTTGAGACTC+AGG | - | chr4.4:45361636-45361655 | None:intergenic | 35.0% | |
| ATATTACCATTGCTAGCAAG+AGG | - | chr4.4:45363008-45363027 | None:intergenic | 35.0% | |
| ATCAATTTCAATAGCCCAAC+TGG | - | chr4.4:45359118-45359137 | None:intergenic | 35.0% | |
| ATCATGAATGGTATGATCGA+CGG | - | chr4.4:45361794-45361813 | None:intergenic | 35.0% | |
| ATGACGTTGGGTTATCAATT+GGG | + | chr4.4:45363059-45363078 | MS.gene08672:intron | 35.0% | |
| ATTATTATCAGTGTCGTGTC+CGG | - | chr4.4:45363139-45363158 | None:intergenic | 35.0% | |
| ATTCTAGCAAACCTGATACA+CGG | + | chr4.4:45361452-45361471 | MS.gene08672:CDS | 35.0% | |
| CAAACCCTTTGAACCATTAA+AGG | - | chr4.4:45359568-45359587 | None:intergenic | 35.0% | |
| CAAAGAAGAATAAGCGCAAA+AGG | - | chr4.4:45363541-45363560 | None:intergenic | 35.0% | |
| CCAAAACAAATGGCTATTGA+AGG | + | chr4.4:45361514-45361533 | MS.gene08672:CDS | 35.0% | |
| CTTTAATGGTTCAAAGGGTT+TGG | + | chr4.4:45359566-45359585 | MS.gene08672:intron | 35.0% | |
| GAAGTTGAAACTCTTCTATC+CGG | - | chr4.4:45362961-45362980 | None:intergenic | 35.0% | |
| GAGAAGAAACTACCATCAAA+TGG | + | chr4.4:45363576-45363595 | MS.gene08672:CDS | 35.0% | |
| GCAATCTTGATTCACTTGAA+TGG | + | chr4.4:45359876-45359895 | MS.gene08672:intron | 35.0% | |
| GGTAGAACCTAAATACTACA+TGG | + | chr4.4:45359997-45360016 | MS.gene08672:intron | 35.0% | |
| GTACTACTCAAAACTTAGCT+CGG | - | chr4.4:45363097-45363116 | None:intergenic | 35.0% | |
| GTACTGAACTCATTCAGTAT+AGG | + | chr4.4:45360890-45360909 | MS.gene08672:intron | 35.0% | |
| TATCCTTACCCAAAAGTGAT+TGG | - | chr4.4:45360488-45360507 | None:intergenic | 35.0% | |
| TCAAGTGAATCAAGATTGCT+AGG | - | chr4.4:45359875-45359894 | None:intergenic | 35.0% | |
| TCAATTTCAATAGCCCAACT+GGG | - | chr4.4:45359117-45359136 | None:intergenic | 35.0% | |
| TCTCTTAGTATTCCTGCATT+AGG | + | chr4.4:45363621-45363640 | MS.gene08672:CDS | 35.0% | |
| TCTGAATAATCATGCAGATG+GGG | + | chr4.4:45361753-45361772 | MS.gene08672:intron | 35.0% | |
| TTCTAACAGGATCGTATAGT+TGG | - | chr4.4:45362060-45362079 | None:intergenic | 35.0% | |
| ! | ATCCGGCAAATTTTATCACA+TGG | - | chr4.4:45362944-45362963 | None:intergenic | 35.0% |
| ! | CAGAGTACTCTGCAAATTAT+GGG | + | chr4.4:45358796-45358815 | MS.gene08672:intron | 35.0% |
| ! | CCTTCAATAGCCATTTGTTT+TGG | - | chr4.4:45361517-45361536 | None:intergenic | 35.0% |
| ! | CTTAGGAAACCAATCACTTT+TGG | + | chr4.4:45360476-45360495 | MS.gene08672:CDS | 35.0% |
| ! | GAACTATGTTTTCCTAATGC+AGG | - | chr4.4:45363636-45363655 | None:intergenic | 35.0% |
| ! | GATTGATGATCAACTAGATG+TGG | + | chr4.4:45362791-45362810 | MS.gene08672:CDS | 35.0% |
| ! | TAAGGAATTGGTCGAGATTT+TGG | - | chr4.4:45363473-45363492 | None:intergenic | 35.0% |
| !! | AAACCAATCACTTTTGGGTA+AGG | + | chr4.4:45360482-45360501 | MS.gene08672:CDS | 35.0% |
| !! | CAAAAGTATTAGTGTCGTGT+CGG | + | chr4.4:45363188-45363207 | MS.gene08672:intron | 35.0% |
| !! | CACTTCTAGTTCTAAGGAAT+TGG | - | chr4.4:45363485-45363504 | None:intergenic | 35.0% |
| !! | TACCATTCGAGTTGTACAAA+AGG | + | chr4.4:45360523-45360542 | MS.gene08672:CDS | 35.0% |
| !!! | ATAGCCATTTGTTTTGGACT+TGG | - | chr4.4:45361511-45361530 | None:intergenic | 35.0% |
| !!! | ATGTTCAGGTTCTGGATTTT+AGG | + | chr4.4:45359301-45359320 | MS.gene08672:intron | 35.0% |
| !!! | TGAGGACTTTTTGTTTTTGG+TGG | + | chr4.4:45359382-45359401 | MS.gene08672:intron | 35.0% |
| AAAGGCTTGGCCTGTAAATT+TGG | + | chr4.4:45362222-45362241 | MS.gene08672:CDS | 40.0% | |
| AACCAAACAACAGGTCAAAC+CGG | - | chr4.4:45359426-45359445 | None:intergenic | 40.0% | |
| AACTCACACAGACAACTTTG+AGG | - | chr4.4:45359729-45359748 | None:intergenic | 40.0% | |
| AATCACGACAGTCGTATCAA+CGG | + | chr4.4:45361240-45361259 | MS.gene08672:CDS | 40.0% | |
| ACCCTTTGAACCATTAAAGG+GGG | - | chr4.4:45359565-45359584 | None:intergenic | 40.0% | |
| ACTTCTCATCATGTGCCTAA+TGG | - | chr4.4:45361269-45361288 | None:intergenic | 40.0% | |
| AGAGGATTGATATCTACTGC+CGG | - | chr4.4:45362446-45362465 | None:intergenic | 40.0% | |
| AGAGTACGATGATCTTGCAA+TGG | + | chr4.4:45363344-45363363 | MS.gene08672:CDS | 40.0% | |
| AGATGCATCAAGATAGAGCA+AGG | - | chr4.4:45362620-45362639 | None:intergenic | 40.0% | |
| AGCTTGGAGCTAAAATCCAT+GGG | + | chr4.4:45363436-45363455 | MS.gene08672:CDS | 40.0% | |
| ATCAATTTCAGTAGCCCAAC+TGG | - | chr4.4:45359025-45359044 | None:intergenic | 40.0% | |
| ATCCAATGTATGGTCCCTTA+CGG | + | chr4.4:45362299-45362318 | MS.gene08672:CDS | 40.0% | |
| CAATCCTCTTATCAATCCTC+TGG | + | chr4.4:45362457-45362476 | MS.gene08672:CDS | 40.0% | |
| CACGACTAACAATGTCGTTA+TGG | - | chr4.4:45359680-45359699 | None:intergenic | 40.0% | |
| CAGCATATGCTCTGATGTAA+TGG | + | chr4.4:45360749-45360768 | MS.gene08672:intron | 40.0% | |
| CATGACGTTGGGTTATCAAT+TGG | + | chr4.4:45363058-45363077 | MS.gene08672:intron | 40.0% | |
| CCAAAGTTGTGCTTACAATG+AGG | - | chr4.4:45360321-45360340 | None:intergenic | 40.0% | |
| CCTCATTGTAAGCACAACTT+TGG | + | chr4.4:45360318-45360337 | MS.gene08672:intron | 40.0% | |
| CCTGGATTGTTCTGATGTTT+CGG | - | chr4.4:45361913-45361932 | None:intergenic | 40.0% | |
| CGATAAAATGTGTTACCTGC+AGG | - | chr4.4:45360655-45360674 | None:intergenic | 40.0% | |
| GCATCCAAGTCCAAAACAAA+TGG | + | chr4.4:45361504-45361523 | MS.gene08672:CDS | 40.0% | |
| GGTCAAGAAAATGTAAGCCA+TGG | - | chr4.4:45360807-45360826 | None:intergenic | 40.0% | |
| GTAGCTCAAAGAAGAGTTCT+CGG | + | chr4.4:45362749-45362768 | MS.gene08672:intron | 40.0% | |
| GTGAATCAAGATTGCTAGGA+AGG | - | chr4.4:45359871-45359890 | None:intergenic | 40.0% | |
| GTTCAAACTAACCTCCTTAG+CGG | - | chr4.4:45362512-45362531 | None:intergenic | 40.0% | |
| TATGCTGCGCATGATTGTTA+AGG | + | chr4.4:45362568-45362587 | MS.gene08672:intron | 40.0% | |
| TCAATTTCAGTAGCCCAACT+GGG | - | chr4.4:45359024-45359043 | None:intergenic | 40.0% | |
| TCCTTTCGAGCTCAAAGAAT+TGG | - | chr4.4:45362128-45362147 | None:intergenic | 40.0% | |
| TCTCAGACTTCGTGAAAAGA+AGG | + | chr4.4:45361002-45361021 | MS.gene08672:intron | 40.0% | |
| TCTGCTTTACCAATCCGTAA+GGG | - | chr4.4:45362316-45362335 | None:intergenic | 40.0% | |
| TCTGTGACAGTTCTGTTATG+TGG | + | chr4.4:45361027-45361046 | MS.gene08672:CDS | 40.0% | |
| TGCGCATGATTGTTAAGGTT+AGG | + | chr4.4:45362573-45362592 | MS.gene08672:intron | 40.0% | |
| TGGCCTGTAAATTTGGTTGA+TGG | + | chr4.4:45362229-45362248 | MS.gene08672:CDS | 40.0% | |
| TGGTGATTGACAGTCTTGAT+AGG | + | chr4.4:45361557-45361576 | MS.gene08672:CDS | 40.0% | |
| TGTGTCACAATCACTTACCA+AGG | + | chr4.4:45361408-45361427 | MS.gene08672:CDS | 40.0% | |
| TTAGGAATGCCAGCATAGTT+GGG | + | chr4.4:45362591-45362610 | MS.gene08672:intron | 40.0% | |
| TTCAAACTAACCTCCTTAGC+GGG | - | chr4.4:45362511-45362530 | None:intergenic | 40.0% | |
| TTTGGCGGTATTTAATCCCA+TGG | - | chr4.4:45363455-45363474 | None:intergenic | 40.0% | |
| ! | AGATTGTTTTCGTTCTTCCC+AGG | - | chr4.4:45361593-45361612 | None:intergenic | 40.0% |
| ! | CAATTGATAACCCAACGTCA+TGG | - | chr4.4:45363060-45363079 | None:intergenic | 40.0% |
| ! | GAAATTTTGAACTTGCACCC+AGG | + | chr4.4:45359792-45359811 | MS.gene08672:intron | 40.0% |
| ! | GAAGCACTTGGAAAGATTTG+CGG | + | chr4.4:45361832-45361851 | MS.gene08672:CDS | 40.0% |
| ! | GCAGAGTACTCTGCAAATTA+TGG | + | chr4.4:45358795-45358814 | MS.gene08672:intron | 40.0% |
| ! | GCAGTTTCTCTAGAAGACTT+AGG | + | chr4.4:45360459-45360478 | MS.gene08672:CDS | 40.0% |
| ! | GTTTTTATGGAATCAGTGCC+TGG | + | chr4.4:45362356-45362375 | MS.gene08672:CDS | 40.0% |
| ! | TCGACGATGAGGTAGATTTT+TGG | + | chr4.4:45362853-45362872 | MS.gene08672:intron | 40.0% |
| ! | TCGTATCAACGGATTCCATT+AGG | + | chr4.4:45361251-45361270 | MS.gene08672:CDS | 40.0% |
| !! | AGGTTTTTACTCTCGGTGTA+AGG | - | chr4.4:45360301-45360320 | None:intergenic | 40.0% |
| !! | GGTTTTTACTCTCGGTGTAA+GGG | - | chr4.4:45360300-45360319 | None:intergenic | 40.0% |
| !! | GTTGTCTGTGTGAGTTTTAG+TGG | + | chr4.4:45359733-45359752 | MS.gene08672:intron | 40.0% |
| !! | TACAAATGAGGAGAAGCACT+TGG | + | chr4.4:45361820-45361839 | MS.gene08672:CDS | 40.0% |
| AAGCTTGATGTTGTGGAGCT+TGG | + | chr4.4:45363420-45363439 | MS.gene08672:CDS | 45.0% | |
| ACAGCCAGAGGATTGATAAG+AGG | - | chr4.4:45362464-45362483 | None:intergenic | 45.0% | |
| ACCAAGGATGAAGCAACTGA+TGG | + | chr4.4:45361424-45361443 | MS.gene08672:CDS | 45.0% | |
| ACCATCAGTTGCTTCATCCT+TGG | - | chr4.4:45361428-45361447 | None:intergenic | 45.0% | |
| ACTAGATGTGGGTAGTGATG+AGG | + | chr4.4:45362803-45362822 | MS.gene08672:CDS | 45.0% | |
| AGAAGGAAAACCCCTTGTTG+TGG | + | chr4.4:45361299-45361318 | MS.gene08672:CDS | 45.0% | |
| AGGACCCAAGTACTTGTACT+CGG | - | chr4.4:45360607-45360626 | None:intergenic | 45.0% | |
| AGTTAATACAGATGGGTCCG+TGG | + | chr4.4:45362198-45362217 | MS.gene08672:CDS | 45.0% | |
| ATATAAGGCGCAGAGTGAGA+TGG | + | chr4.4:45361537-45361556 | MS.gene08672:CDS | 45.0% | |
| ATCCGTAAGGGACCATACAT+TGG | - | chr4.4:45362304-45362323 | None:intergenic | 45.0% | |
| ATCCTCAATGAAGCTGACGA+CGG | - | chr4.4:45359765-45359784 | None:intergenic | 45.0% | |
| ATCGACGTTGTCTGCAATAC+TGG | + | chr4.4:45361068-45361087 | MS.gene08672:CDS | 45.0% | |
| ATGTATGGTCCCTTACGGAT+TGG | + | chr4.4:45362304-45362323 | MS.gene08672:CDS | 45.0% | |
| CAAAGCTCGACACGCATTTA+AGG | + | chr4.4:45358822-45358841 | MS.gene08672:CDS | 45.0% | |
| CCATTTGTGCCAATCCTAGT+TGG | + | chr4.4:45359843-45359862 | MS.gene08672:intron | 45.0% | |
| CCGAAACATCAGAACAATCC+AGG | + | chr4.4:45361910-45361929 | MS.gene08672:CDS | 45.0% | |
| CCTTAGAACTAGAAGTGAGC+CGG | + | chr4.4:45363488-45363507 | MS.gene08672:CDS | 45.0% | |
| CTCTGCTTTACCAATCCGTA+AGG | - | chr4.4:45362317-45362336 | None:intergenic | 45.0% | |
| GAACCATTAAAGGGGGCAAT+AGG | - | chr4.4:45359558-45359577 | None:intergenic | 45.0% | |
| GACAGCTGAAAACAGTTGCA+TGG | - | chr4.4:45362015-45362034 | None:intergenic | 45.0% | |
| GAGCCGGTAAATCTTCAGTT+TGG | + | chr4.4:45362334-45362353 | MS.gene08672:CDS | 45.0% | |
| GAGCTTGGAGCTAAAATCCA+TGG | + | chr4.4:45363435-45363454 | MS.gene08672:CDS | 45.0% | |
| GCCAATTCTTTGAGCTCGAA+AGG | + | chr4.4:45362124-45362143 | MS.gene08672:CDS | 45.0% | |
| GCCCCCTTTAATGGTTCAAA+GGG | + | chr4.4:45359561-45359580 | MS.gene08672:intron | 45.0% | |
| GCGTGCCAAATATATGACAC+TGG | + | chr4.4:45361856-45361875 | MS.gene08672:CDS | 45.0% | |
| GCTATTCCTCTTGCTAGCAA+TGG | + | chr4.4:45362999-45363018 | MS.gene08672:intron | 45.0% | |
| GCTGAAAACAGTTGCATGGA+TGG | - | chr4.4:45362011-45362030 | None:intergenic | 45.0% | |
| GGAATCGGACATCCAATGTA+TGG | + | chr4.4:45362289-45362308 | MS.gene08672:CDS | 45.0% | |
| GGCGCACTTCAGTATTTGTT+CGG | + | chr4.4:45360544-45360563 | MS.gene08672:CDS | 45.0% | |
| GTAGGACCGGAAAATGGAAT+CGG | + | chr4.4:45362274-45362293 | MS.gene08672:CDS | 45.0% | |
| GTTAGGAATGCCAGCATAGT+TGG | + | chr4.4:45362590-45362609 | MS.gene08672:intron | 45.0% | |
| GTTCTGTTATGTGGCACTAG+TGG | + | chr4.4:45361036-45361055 | MS.gene08672:CDS | 45.0% | |
| TAACTAGTGCCACCATCACT+AGG | - | chr4.4:45362382-45362401 | None:intergenic | 45.0% | |
| TAGGTAGAAGCCCACAACAA+GGG | - | chr4.4:45361313-45361332 | None:intergenic | 45.0% | |
| TCAAACTAACCTCCTTAGCG+GGG | - | chr4.4:45362510-45362529 | None:intergenic | 45.0% | |
| TCACTTCAGGGTAGCAGATT+GGG | + | chr4.4:45361217-45361236 | MS.gene08672:intron | 45.0% | |
| TCAGCTGATCCAATCCTTTC+TGG | + | chr4.4:45363654-45363673 | MS.gene08672:CDS | 45.0% | |
| TCTAGAGAAACTGCTGCATC+AGG | - | chr4.4:45360453-45360472 | None:intergenic | 45.0% | |
| TCTTGAGATGCCACTGCTAT+TGG | - | chr4.4:45363516-45363535 | None:intergenic | 45.0% | |
| TGACAAAGAAGTCGACGATG+AGG | + | chr4.4:45362842-45362861 | MS.gene08672:CDS | 45.0% | |
| TGATAGGCTAATCACTGCCT+GGG | + | chr4.4:45361573-45361592 | MS.gene08672:CDS | 45.0% | |
| TGCCCCCTTTAATGGTTCAA+AGG | + | chr4.4:45359560-45359579 | MS.gene08672:intron | 45.0% | |
| TTCACTTCAGGGTAGCAGAT+TGG | + | chr4.4:45361216-45361235 | MS.gene08672:intron | 45.0% | |
| TTGATAGGCTAATCACTGCC+TGG | + | chr4.4:45361572-45361591 | MS.gene08672:CDS | 45.0% | |
| TTGGCCGAGTACAAGTACTT+GGG | + | chr4.4:45360600-45360619 | MS.gene08672:CDS | 45.0% | |
| TTTGGCCGAGTACAAGTACT+TGG | + | chr4.4:45360599-45360618 | MS.gene08672:CDS | 45.0% | |
| ! | AAAGAAGAGTTCTCGGTGCA+TGG | + | chr4.4:45362756-45362775 | MS.gene08672:CDS | 45.0% |
| ! | CCAACTAGGATTGGCACAAA+TGG | - | chr4.4:45359846-45359865 | None:intergenic | 45.0% |
| ! | CGCCTTTTGTACAACTCGAA+TGG | - | chr4.4:45360528-45360547 | None:intergenic | 45.0% |
| ! | CTCTCTTTTGCCATGACGTT+GGG | + | chr4.4:45363047-45363066 | MS.gene08672:intron | 45.0% |
| ! | CTGTTTTCAGCTGTCTTCGA+AGG | + | chr4.4:45362020-45362039 | MS.gene08672:CDS | 45.0% |
| ! | GAAGGAAAACCCCTTGTTGT+GGG | + | chr4.4:45361300-45361319 | MS.gene08672:CDS | 45.0% |
| ! | GAGAAGTTTTGCCAGTGAGA+AGG | + | chr4.4:45361282-45361301 | MS.gene08672:CDS | 45.0% |
| ! | GGAATTGGTCGAGATTTTGG+CGG | - | chr4.4:45363470-45363489 | None:intergenic | 45.0% |
| ! | GGATGTCCGATTCCATTTTC+CGG | - | chr4.4:45362283-45362302 | None:intergenic | 45.0% |
| ! | GGCGACATGGATTTTGTAGT+TGG | + | chr4.4:45360127-45360146 | MS.gene08672:intron | 45.0% |
| ! | TTATGTGGCACTAGTGGATG+TGG | + | chr4.4:45361042-45361061 | MS.gene08672:CDS | 45.0% |
| !! | AGGAAGGTACCAACTAGGAT+TGG | - | chr4.4:45359855-45359874 | None:intergenic | 45.0% |
| !! | GGTAATGGGAAGTCCATATG+TGG | + | chr4.4:45362250-45362269 | MS.gene08672:CDS | 45.0% |
| !! | TACGCGTGCTGAAAAGCATT+TGG | + | chr4.4:45361943-45361962 | MS.gene08672:CDS | 45.0% |
| !! | TGATGGTGGCACTAGTTATG+CGG | + | chr4.4:45362384-45362403 | MS.gene08672:CDS | 45.0% |
| !! | TTGCTAGGAAGGTACCAACT+AGG | - | chr4.4:45359860-45359879 | None:intergenic | 45.0% |
| !!! | TTTTTTAAATGAAATATTTT+AGG | + | chr4.4:45360160-45360179 | MS.gene08672:intron | 5.0% |
| AACTGGGTCAATAAGCCTCG+AGG | - | chr4.4:45359008-45359027 | None:intergenic | 50.0% | |
| ACCAAGTCTGCTCTCTGGTT+AGG | - | chr4.4:45360627-45360646 | None:intergenic | 50.0% | |
| ACTGGGTCAATAAGCCTCGA+GGG | - | chr4.4:45359007-45359026 | None:intergenic | 50.0% | |
| AGAGCTGATGGGACTGATAC+CGG | + | chr4.4:45362424-45362443 | MS.gene08672:CDS | 50.0% | |
| AGGTAGAAGCCCACAACAAG+GGG | - | chr4.4:45361312-45361331 | None:intergenic | 50.0% | |
| ATCAGATTTCCCCGCTAAGG+AGG | + | chr4.4:45362498-45362517 | MS.gene08672:CDS | 50.0% | |
| ATGCTCAGTAGCACAAGAGC+CGG | - | chr4.4:45361488-45361507 | None:intergenic | 50.0% | |
| CACGCGTACAGAGATAATCC+TGG | - | chr4.4:45361931-45361950 | None:intergenic | 50.0% | |
| CGAGGCTTATTGACCCAGTT+GGG | + | chr4.4:45359008-45359027 | MS.gene08672:intron | 50.0% | |
| CGGGGAAATCTGATAGCCTA+GGG | - | chr4.4:45362492-45362511 | None:intergenic | 50.0% | |
| CGTCCTATTGCCCCCTTTAA+TGG | + | chr4.4:45359552-45359571 | MS.gene08672:intron | 50.0% | |
| CTAGAACCAAGTCTGCTCTC+TGG | - | chr4.4:45360632-45360651 | None:intergenic | 50.0% | |
| GATACACGGACATCAGAGAC+CGG | + | chr4.4:45361466-45361485 | MS.gene08672:CDS | 50.0% | |
| GCTATCAGATTTCCCCGCTA+AGG | + | chr4.4:45362495-45362514 | MS.gene08672:CDS | 50.0% | |
| GGGAAGTCCATATGTGGTGT+AGG | + | chr4.4:45362256-45362275 | MS.gene08672:CDS | 50.0% | |
| GGGGAAATCTGATAGCCTAG+GGG | - | chr4.4:45362491-45362510 | None:intergenic | 50.0% | |
| GTAGGTAGAAGCCCACAACA+AGG | - | chr4.4:45361314-45361333 | None:intergenic | 50.0% | |
| GTCCATATGTGGTGTAGGAC+CGG | + | chr4.4:45362261-45362280 | MS.gene08672:CDS | 50.0% | |
| GTCTCTGATGTCCGTGTATC+AGG | - | chr4.4:45361466-45361485 | None:intergenic | 50.0% | |
| TCCTAACCAGAGAGCAGACT+TGG | + | chr4.4:45360623-45360642 | MS.gene08672:CDS | 50.0% | |
| TCGAGGCTTATTGACCCAGT+TGG | + | chr4.4:45359007-45359026 | MS.gene08672:intron | 50.0% | |
| TGTGGTGTAGGACCGGAAAA+TGG | + | chr4.4:45362268-45362287 | MS.gene08672:CDS | 50.0% | |
| TTAAAGGGGGCAATAGGACG+AGG | - | chr4.4:45359552-45359571 | None:intergenic | 50.0% | |
| TTCCGGTCCTACACCACATA+TGG | - | chr4.4:45362266-45362285 | None:intergenic | 50.0% | |
| TTCGCTTCAGCAACAGCAAC+CGG | - | chr4.4:45361358-45361377 | None:intergenic | 50.0% | |
| TTGAACTTGCACCCAGGTCA+CGG | + | chr4.4:45359798-45359817 | MS.gene08672:intron | 50.0% | |
| TTGACGAGTCCAGAGCTGAT+GGG | + | chr4.4:45362413-45362432 | MS.gene08672:CDS | 50.0% | |
| ! | CAAGGGGTTTTCCTTCTCAC+TGG | - | chr4.4:45361296-45361315 | None:intergenic | 50.0% |
| ! | CTATGAAGCACCACAGACTC+CGG | + | chr4.4:45363117-45363136 | MS.gene08672:intron | 50.0% |
| ! | GACTAGTTATTGCGGCGACA+TGG | + | chr4.4:45360114-45360133 | MS.gene08672:intron | 50.0% |
| ! | GATGGTGGCACTAGTTATGC+GGG | + | chr4.4:45362385-45362404 | MS.gene08672:CDS | 50.0% |
| ! | GCTCTCTTTTGCCATGACGT+TGG | + | chr4.4:45363046-45363065 | MS.gene08672:intron | 50.0% |
| ! | TCCTTTCTGGTGCTCCTCAA+AGG | + | chr4.4:45363667-45363686 | MS.gene08672:CDS | 50.0% |
| !! | ACCTTTGAGGAGCACCAGAA+AGG | - | chr4.4:45363671-45363690 | None:intergenic | 50.0% |
| !! | ACGGATTGGTAAAGCAGAGC+CGG | + | chr4.4:45362318-45362337 | MS.gene08672:CDS | 50.0% |
| !! | CCGGCTCACTTCTAGTTCTA+AGG | - | chr4.4:45363491-45363510 | None:intergenic | 50.0% |
| !! | GACCGGTTTGACCTGTTGTT+TGG | + | chr4.4:45359421-45359440 | MS.gene08672:intron | 50.0% |
| !! | TGAGGAGCACCAGAAAGGAT+TGG | - | chr4.4:45363666-45363685 | None:intergenic | 50.0% |
| ATCAGTGCCTGGCCTAGTGA+TGG | + | chr4.4:45362367-45362386 | MS.gene08672:CDS | 55.0% | |
| CAAACACTCGCCTGCATGGT+AGG | - | chr4.4:45361332-45361351 | None:intergenic | 55.0% | |
| CGGAGTCTGTGGTGCTTCAT+AGG | - | chr4.4:45363119-45363138 | None:intergenic | 55.0% | |
| CTACCATGCAGGCGAGTGTT+TGG | + | chr4.4:45361330-45361349 | MS.gene08672:CDS | 55.0% | |
| GATCCAAACACTCGCCTGCA+TGG | - | chr4.4:45361336-45361355 | None:intergenic | 55.0% | |
| GATGCCACTGCTATTGGCAC+CGG | - | chr4.4:45363510-45363529 | None:intergenic | 55.0% | |
| GCGGGGAAATCTGATAGCCT+AGG | - | chr4.4:45362493-45362512 | None:intergenic | 55.0% | |
| GCTCACATCAACCGTGACCT+GGG | - | chr4.4:45359812-45359831 | None:intergenic | 55.0% | |
| GGTATCAGTCCCATCAGCTC+TGG | - | chr4.4:45362425-45362444 | None:intergenic | 55.0% | |
| GTTGACGAGTCCAGAGCTGA+TGG | + | chr4.4:45362412-45362431 | MS.gene08672:CDS | 55.0% | |
| TACAGATGGGTCCGTGGCAA+AGG | + | chr4.4:45362204-45362223 | MS.gene08672:CDS | 55.0% | |
| TACAGGCCAAGCCTTTGCCA+CGG | - | chr4.4:45362218-45362237 | None:intergenic | 55.0% | |
| TGCAGGCGAGTGTTTGGATC+CGG | + | chr4.4:45361336-45361355 | MS.gene08672:CDS | 55.0% | |
| TGCCGTCGTCAGCTTCATTG+AGG | + | chr4.4:45359760-45359779 | MS.gene08672:intron | 55.0% | |
| TGGGCTTCTACCTACCATGC+AGG | + | chr4.4:45361319-45361338 | MS.gene08672:CDS | 55.0% | |
| ! | GCAAGGCATCCCAACTATGC+TGG | - | chr4.4:45362603-45362622 | None:intergenic | 55.0% |
| ! | GCAGGTTGGATCTGTAGACG+AGG | + | chr4.4:45363302-45363321 | MS.gene08672:intron | 55.0% |
| ! | GGTTGCTGTTGCTGAAGCGA+AGG | + | chr4.4:45361357-45361376 | MS.gene08672:CDS | 55.0% |
| ! | GTCTTCGAAGGCGTGAAGCT+GGG | + | chr4.4:45362032-45362051 | MS.gene08672:CDS | 55.0% |
| ! | TCTTCGAAGGCGTGAAGCTG+GGG | + | chr4.4:45362033-45362052 | MS.gene08672:CDS | 55.0% |
| ! | TGTCTTCGAAGGCGTGAAGC+TGG | + | chr4.4:45362031-45362050 | MS.gene08672:CDS | 55.0% |
| !! | AGCCTCGAGGGATTAGTCTC+TGG | - | chr4.4:45358995-45359014 | None:intergenic | 55.0% |
| !! | CAGACTTGGTTCTAGCCTGC+AGG | + | chr4.4:45360637-45360656 | MS.gene08672:CDS | 55.0% |
| !! | GCCTCGAGGGATTAGTCTCT+GGG | - | chr4.4:45358994-45359013 | None:intergenic | 55.0% |
| AGTGCCACCATCACTAGGCC+AGG | - | chr4.4:45362377-45362396 | None:intergenic | 60.0% | |
| AGTGCCTGGCCTAGTGATGG+TGG | + | chr4.4:45362370-45362389 | MS.gene08672:CDS | 60.0% | |
| AGTGTCGTGTCCGGAGTCTG+TGG | - | chr4.4:45363130-45363149 | None:intergenic | 60.0% | |
| ATGGGTCCGTGGCAAAGGCT+TGG | + | chr4.4:45362209-45362228 | MS.gene08672:CDS | 60.0% | |
| CGAGTCGCGTCAACCCAGTT+GGG | + | chr4.4:45359101-45359120 | MS.gene08672:intron | 60.0% | |
| CGCTCACATCAACCGTGACC+TGG | - | chr4.4:45359813-45359832 | None:intergenic | 60.0% | |
| GCCCAGAGACTAATCCCTCG+AGG | + | chr4.4:45358990-45359009 | MS.gene08672:intron | 60.0% | |
| TCGAGTCGCGTCAACCCAGT+TGG | + | chr4.4:45359100-45359119 | MS.gene08672:intron | 60.0% | |
| ! | ACTGGGTTGACGCGACTCGA+TGG | - | chr4.4:45359100-45359119 | None:intergenic | 60.0% |
| ! | TGAGCCGGTGCCAATAGCAG+TGG | + | chr4.4:45363503-45363522 | MS.gene08672:CDS | 60.0% |
| CCTAGGGGAGCTACAGCCAG+AGG | - | chr4.4:45362476-45362495 | None:intergenic | 65.0% | |
| CCTCTGGCTGTAGCTCCCCT+AGG | + | chr4.4:45362473-45362492 | MS.gene08672:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 45358668 | 45363692 | 45358668 | ID=MS.gene08672 |
| chr4.4 | mRNA | 45358668 | 45363692 | 45358668 | ID=MS.gene08672.t1;Parent=MS.gene08672 |
| chr4.4 | exon | 45358668 | 45358688 | 45358668 | ID=MS.gene08672.t1.exon1;Parent=MS.gene08672.t1 |
| chr4.4 | CDS | 45358668 | 45358688 | 45358668 | ID=cds.MS.gene08672.t1;Parent=MS.gene08672.t1 |
| chr4.4 | exon | 45358799 | 45358843 | 45358799 | ID=MS.gene08672.t1.exon2;Parent=MS.gene08672.t1 |
| chr4.4 | CDS | 45358799 | 45358843 | 45358799 | ID=cds.MS.gene08672.t1;Parent=MS.gene08672.t1 |
| chr4.4 | exon | 45360393 | 45360658 | 45360393 | ID=MS.gene08672.t1.exon3;Parent=MS.gene08672.t1 |
| chr4.4 | CDS | 45360393 | 45360658 | 45360393 | ID=cds.MS.gene08672.t1;Parent=MS.gene08672.t1 |
| chr4.4 | exon | 45361008 | 45361089 | 45361008 | ID=MS.gene08672.t1.exon4;Parent=MS.gene08672.t1 |
| chr4.4 | CDS | 45361008 | 45361089 | 45361008 | ID=cds.MS.gene08672.t1;Parent=MS.gene08672.t1 |
| chr4.4 | exon | 45361226 | 45361651 | 45361226 | ID=MS.gene08672.t1.exon5;Parent=MS.gene08672.t1 |
| chr4.4 | CDS | 45361226 | 45361651 | 45361226 | ID=cds.MS.gene08672.t1;Parent=MS.gene08672.t1 |
| chr4.4 | exon | 45361770 | 45362519 | 45361770 | ID=MS.gene08672.t1.exon6;Parent=MS.gene08672.t1 |
| chr4.4 | CDS | 45361770 | 45362519 | 45361770 | ID=cds.MS.gene08672.t1;Parent=MS.gene08672.t1 |
| chr4.4 | exon | 45362753 | 45362863 | 45362753 | ID=MS.gene08672.t1.exon7;Parent=MS.gene08672.t1 |
| chr4.4 | CDS | 45362753 | 45362863 | 45362753 | ID=cds.MS.gene08672.t1;Parent=MS.gene08672.t1 |
| chr4.4 | exon | 45363306 | 45363692 | 45363306 | ID=MS.gene08672.t1.exon8;Parent=MS.gene08672.t1 |
| chr4.4 | CDS | 45363306 | 45363692 | 45363306 | ID=cds.MS.gene08672.t1;Parent=MS.gene08672.t1 |
| Gene Sequence |
| Protein sequence |