Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08736.t1 | XP_013455978.1 | 97.5 | 688 | 17 | 0 | 8 | 695 | 51 | 738 | 0.00E+00 | 1266.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08736.t1 | Q9FJH9 | 61.7 | 716 | 224 | 16 | 8 | 693 | 43 | 738 | 8.6e-213 | 741.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08736.t1 | A0A072UJT3 | 97.5 | 688 | 17 | 0 | 8 | 695 | 51 | 738 | 0.0e+00 | 1266.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene08736 | MS.gene028673 | PPI |
MS.gene08736 | MS.gene050097 | PPI |
MS.gene08672 | MS.gene08736 | PPI |
MS.gene43869 | MS.gene08736 | PPI |
MS.gene050097 | MS.gene08736 | PPI |
MS.gene08736 | MS.gene31244 | PPI |
MS.gene08736 | MS.gene54024 | PPI |
MS.gene31244 | MS.gene08736 | PPI |
MS.gene08736 | MS.gene007701 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08736.t1 | MTR_4g057960 | 97.965 | 688 | 14 | 0 | 8 | 695 | 51 | 738 | 0.0 | 1407 |
MS.gene08736.t1 | MTR_2g095260 | 76.157 | 713 | 133 | 6 | 8 | 693 | 34 | 736 | 0.0 | 1077 |
MS.gene08736.t1 | MTR_0372s0010 | 97.683 | 259 | 6 | 0 | 23 | 281 | 1 | 259 | 0.0 | 521 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08736.t1 | AT5G60760 | 62.570 | 716 | 218 | 15 | 8 | 693 | 43 | 738 | 0.0 | 833 |
MS.gene08736.t1 | AT3G45090 | 62.059 | 709 | 210 | 12 | 8 | 691 | 37 | 711 | 0.0 | 811 |
MS.gene08736.t1 | AT3G45090 | 59.804 | 714 | 221 | 13 | 10 | 691 | 13 | 692 | 0.0 | 777 |
MS.gene08736.t1 | AT5G60760 | 63.388 | 549 | 170 | 13 | 156 | 693 | 1 | 529 | 0.0 | 640 |
Find 163 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCAGAGTACTCTGCAAATTA+TGG | 0.176634 | 4.2:+45127001 | MS.gene08736:intron |
TCAGCTGATCCAATCCTTTC+TGG | 0.176923 | 4.2:+45131990 | MS.gene08736:CDS |
CAAAGCTCGACACGCATTTA+AGG | 0.189656 | 4.2:+45127028 | MS.gene08736:CDS |
TTTGGCCGAGTACAAGTATT+TGG | 0.202866 | 4.2:+45128927 | MS.gene08736:CDS |
TAAGGAATTGGTCGAGATTT+TGG | 0.226708 | 4.2:-45131806 | None:intergenic |
CTTAGGAAACCAATCACTTT+TGG | 0.234643 | 4.2:+45128804 | MS.gene08736:CDS |
AAAGGCTTGGCCTGTAAATT+TGG | 0.250814 | 4.2:+45130514 | MS.gene08736:CDS |
GTCTCTGATGTCCGTGTATC+AGG | 0.259296 | 4.2:-45129755 | None:intergenic |
CCTTCAATAGCCATTTGTTT+TGG | 0.270255 | 4.2:-45129806 | None:intergenic |
TTCAAATTTACCTCCTTTGC+AGG | 0.272771 | 4.2:-45130800 | None:intergenic |
AGGATCCAGTGTCATATATT+TGG | 0.280175 | 4.2:-45130153 | None:intergenic |
TTACTATCAACCAAATTTAC+AGG | 0.300562 | 4.2:-45130524 | None:intergenic |
CCTGGATTGTTCTGATGTTT+CGG | 0.307423 | 4.2:-45130202 | None:intergenic |
TCTTGAGATGCCACTGCTAT+TGG | 0.314852 | 4.2:-45131849 | None:intergenic |
AAACCAAACTGAAGATTTAC+AGG | 0.317941 | 4.2:-45130629 | None:intergenic |
TAAATTTGGTTGATAGTAAT+GGG | 0.335808 | 4.2:+45130528 | MS.gene08736:CDS |
TCTCTTAGTATTCCTGCATT+AGG | 0.338277 | 4.2:+45131957 | MS.gene08736:CDS |
AACATTTGTATTGTTTACTT+TGG | 0.338326 | 4.2:-45130261 | None:intergenic |
CCGGCTCACTTCTAGTTCTA+AGG | 0.341207 | 4.2:-45131824 | None:intergenic |
ACATTTGTATTGTTTACTTT+GGG | 0.342228 | 4.2:-45130260 | None:intergenic |
TGTGGTGTAGGACCGGAAAA+TGG | 0.343107 | 4.2:+45130560 | MS.gene08736:CDS |
ACTTCTCATCATGTGCCTAA+TGG | 0.343567 | 4.2:-45129558 | None:intergenic |
TTCGCTTCAGCAACAGCAAC+TGG | 0.348330 | 4.2:-45129647 | None:intergenic |
AATGGCTATTGAAGGATATA+AGG | 0.348561 | 4.2:+45129814 | MS.gene08736:CDS |
AATTTGGATTTGCCATTTGA+TGG | 0.349604 | 4.2:-45131924 | None:intergenic |
CACTTCTAGTTCTAAGGAAT+TGG | 0.350027 | 4.2:-45131818 | None:intergenic |
ATCCACGTTGTCTGCAATAC+TGG | 0.350429 | 4.2:+45129385 | MS.gene08736:CDS |
TCCTTTCGAGCTCAAAGAAT+TGG | 0.363392 | 4.2:-45130417 | None:intergenic |
CAGAGTACTCTGCAAATTAT+GGG | 0.368373 | 4.2:+45127002 | MS.gene08736:intron |
ATGGAAGATGTGTTAGAAAA+TGG | 0.369556 | 4.2:+45131699 | MS.gene08736:CDS |
ACTGTTACAGTATTTCTAAC+AGG | 0.370366 | 4.2:-45130362 | None:intergenic |
ATGTGTTAGAAAATGGTTAT+TGG | 0.381979 | 4.2:+45131706 | MS.gene08736:CDS |
CTACCATGCAGGCGAGTGTT+TGG | 0.385707 | 4.2:+45129622 | MS.gene08736:CDS |
TTGGCCGAGTACAAGTATTT+GGG | 0.389086 | 4.2:+45128928 | MS.gene08736:CDS |
TCACTTCAGGGTAGCAGATT+GGG | 0.395600 | 4.2:+45129509 | MS.gene08736:intron |
TTCACTTCAGGGTAGCAGAT+TGG | 0.400044 | 4.2:+45129508 | MS.gene08736:intron |
TTCCGGTCCTACACCACATA+TGG | 0.401890 | 4.2:-45130555 | None:intergenic |
GTCTTCGAAGGCGTGAAGCT+GGG | 0.404425 | 4.2:+45130324 | MS.gene08736:CDS |
TATCCTTACCCAAAAGTGAT+TGG | 0.407568 | 4.2:-45128813 | None:intergenic |
GAGCCTGTAAATCTTCAGTT+TGG | 0.408149 | 4.2:+45130626 | MS.gene08736:CDS |
AGATATTGTATGCGATGCTT+TGG | 0.414179 | 4.2:+45128909 | MS.gene08736:CDS |
CAAAGAAGGATAAGCGCAAA+AGG | 0.414489 | 4.2:-45131874 | None:intergenic |
TGTCTTCGAAGGCGTGAAGC+TGG | 0.422623 | 4.2:+45130323 | MS.gene08736:CDS |
TACTGTAACAGTTGTTTATG+AGG | 0.423133 | 4.2:+45130373 | MS.gene08736:CDS |
AAGCTTGATGTTGTGGAGCT+TGG | 0.424880 | 4.2:+45131756 | MS.gene08736:CDS |
GGCGCACTTCAGTATTTGTT+CGG | 0.424912 | 4.2:+45128872 | MS.gene08736:CDS |
TCTCAGACTTCGTGAAAAGA+AGG | 0.434618 | 4.2:+45129319 | MS.gene08736:intron |
TTCTAACAGGATCGTATAGT+TGG | 0.437973 | 4.2:-45130349 | None:intergenic |
GTAAATTTGGTTGATAGTAA+TGG | 0.443024 | 4.2:+45130527 | MS.gene08736:CDS |
TACGCGTGCTGAAAAGCATT+TGG | 0.443910 | 4.2:+45130235 | MS.gene08736:CDS |
TTTCAGTTGATTCAGAGAAA+AGG | 0.456688 | 4.2:+45130443 | MS.gene08736:CDS |
GTAGTTTCTCTAGAAGACTT+AGG | 0.458125 | 4.2:+45128787 | MS.gene08736:CDS |
TCGTATCAACGGATTCCATT+AGG | 0.462567 | 4.2:+45129543 | MS.gene08736:CDS |
TCTAGAGAAACTACTGCATC+AGG | 0.464056 | 4.2:-45128778 | None:intergenic |
ACCATCAGTTGCTTCATCCT+TGG | 0.465058 | 4.2:-45129717 | None:intergenic |
AATAATCATGGTGGTGGTGG+TGG | 0.470078 | 4.2:+45126867 | None:intergenic |
GTAGCTCAAAGAAGAGTTCT+CGG | 0.472331 | 4.2:+45131091 | MS.gene08736:intron |
TTGATAGGCTAATCACTGCC+TGG | 0.475376 | 4.2:+45129864 | MS.gene08736:CDS |
ACCAAGTCTGCTCTCTGGTT+AGG | 0.481466 | 4.2:-45128952 | None:intergenic |
TGGTGATTGACAGTCTTGAT+AGG | 0.483565 | 4.2:+45129849 | MS.gene08736:CDS |
TACAGATGGGTCCGTGGCAA+AGG | 0.486347 | 4.2:+45130496 | MS.gene08736:CDS |
ATGAATAATCATGGTGGTGG+TGG | 0.486953 | 4.2:+45126864 | None:intergenic |
TCCTAACCAGAGAGCAGACT+TGG | 0.487241 | 4.2:+45128951 | MS.gene08736:CDS |
CCAAAACAAATGGCTATTGA+AGG | 0.492478 | 4.2:+45129806 | MS.gene08736:CDS |
CAATCCTCTTATCAATCCTC+TGG | 0.493200 | 4.2:+45130749 | MS.gene08736:CDS |
ATGGCTATAGTTAATACAGA+TGG | 0.493983 | 4.2:+45130482 | MS.gene08736:CDS |
GGTATCAGTCCCATCAGCTC+TGG | 0.496720 | 4.2:-45130714 | None:intergenic |
GTCCATATGTGGTGTAGGAC+CGG | 0.496890 | 4.2:+45130553 | MS.gene08736:CDS |
CTCTGCTTTACCAATCCGTA+AGG | 0.496973 | 4.2:-45130606 | None:intergenic |
GAGAAGAAACTACCATCAAA+TGG | 0.497750 | 4.2:+45131912 | MS.gene08736:CDS |
GAAGGAAAACCCCTTGTTGT+GGG | 0.499021 | 4.2:+45129592 | MS.gene08736:CDS |
AGAGCTGATGGGACTGATAC+CGG | 0.500641 | 4.2:+45130716 | MS.gene08736:CDS |
TGAGGAGCACCAGAAAGGAT+TGG | 0.505269 | 4.2:-45131999 | None:intergenic |
GCCAATTCTTTGAGCTCGAA+AGG | 0.506088 | 4.2:+45130416 | MS.gene08736:CDS |
ATGGGTCCGTGGCAAAGGCT+TGG | 0.507315 | 4.2:+45130501 | MS.gene08736:CDS |
GGAATCGGACATCCAATGTA+TGG | 0.507413 | 4.2:+45130581 | MS.gene08736:CDS |
TTTGGCGGTATTTAATCCCA+TGG | 0.507498 | 4.2:-45131788 | None:intergenic |
CTAGAACCAAGTCTGCTCTC+TGG | 0.513854 | 4.2:-45128957 | None:intergenic |
AAAGACTAAGCTTGATGTTG+TGG | 0.518975 | 4.2:+45131749 | MS.gene08736:CDS |
ATCCAATGTATGGTCCCTTA+CGG | 0.519383 | 4.2:+45130591 | MS.gene08736:CDS |
TTTGTAATGTAGATCATGAA+TGG | 0.519888 | 4.2:-45130095 | None:intergenic |
GCAGGGAAATCTGATAGCCT+AGG | 0.520055 | 4.2:-45130782 | None:intergenic |
GAGCTTGGAGCTAAAATCCA+TGG | 0.522387 | 4.2:+45131771 | MS.gene08736:CDS |
AGAATACCCTACTACCTTTG+AGG | 0.524401 | 4.2:-45132017 | None:intergenic |
CCGAAACATCAGAACAATCC+AGG | 0.525705 | 4.2:+45130202 | MS.gene08736:CDS |
GCATCCAAGTCCAAAACAAA+TGG | 0.525984 | 4.2:+45129796 | MS.gene08736:CDS |
CAGGGAAATCTGATAGCCTA+GGG | 0.526891 | 4.2:-45130781 | None:intergenic |
TCTTCGAAGGCGTGAAGCTG+GGG | 0.527424 | 4.2:+45130325 | MS.gene08736:CDS |
TCCTTTCTGGTGCTCCTCAA+AGG | 0.529005 | 4.2:+45132003 | MS.gene08736:CDS |
CAGACTTGGTTCTAGCCTGC+AGG | 0.535130 | 4.2:+45128965 | MS.gene08736:CDS |
TACCATTCGAGTTGTACAAA+AGG | 0.538198 | 4.2:+45128851 | MS.gene08736:CDS |
GTTGACGAGTCCAGAGCTGA+TGG | 0.539133 | 4.2:+45130704 | MS.gene08736:CDS |
CAAACACTCGCCTGCATGGT+AGG | 0.540726 | 4.2:-45129621 | None:intergenic |
ACCTTTGAGGAGCACCAGAA+AGG | 0.550376 | 4.2:-45132004 | None:intergenic |
GATTGATGATCAACTAGATG+TGG | 0.555052 | 4.2:+45131133 | MS.gene08736:CDS |
ACAGCCAGAGGATTGATAAG+AGG | 0.556047 | 4.2:-45130753 | None:intergenic |
TCAAATTTACCTCCTTTGCA+GGG | 0.556335 | 4.2:-45130799 | None:intergenic |
TAACTAGTGCCGCCATCACT+AGG | 0.559950 | 4.2:-45130671 | None:intergenic |
CATGATCTACATTACAAATG+AGG | 0.561065 | 4.2:+45130100 | MS.gene08736:CDS |
CACGCGTACAGAGATAATCC+TGG | 0.561557 | 4.2:-45130220 | None:intergenic |
GTAGGACCGGAAAATGGAAT+CGG | 0.563314 | 4.2:+45130566 | MS.gene08736:CDS |
GCTGAAAACAGTTGCATGGA+TGG | 0.566240 | 4.2:-45130300 | None:intergenic |
ATCCGTAAGGGACCATACAT+TGG | 0.569972 | 4.2:-45130593 | None:intergenic |
GGGAAGTCCATATGTGGTGT+AGG | 0.572907 | 4.2:+45130548 | MS.gene08736:CDS |
GACAGCTGAAAACAGTTGCA+TGG | 0.576375 | 4.2:-45130304 | None:intergenic |
AAAGAAGAGTTCTCGGTGCA+TGG | 0.576983 | 4.2:+45131098 | MS.gene08736:CDS |
CCTTAGAACTAGAAGTGAGC+CGG | 0.578935 | 4.2:+45131824 | MS.gene08736:CDS |
GATGGCGGCACTAGTTATGC+GGG | 0.581228 | 4.2:+45130677 | MS.gene08736:CDS |
AAAGAAGGATAAGCGCAAAA+GGG | 0.582519 | 4.2:-45131873 | None:intergenic |
AGAAGGAAAACCCCTTGTTG+TGG | 0.582553 | 4.2:+45129591 | MS.gene08736:CDS |
ATGTATGGTCCCTTACGGAT+TGG | 0.583095 | 4.2:+45130596 | MS.gene08736:CDS |
GTGCTGTTATGTGGCACTAG+TGG | 0.584663 | 4.2:+45129353 | MS.gene08736:CDS |
TACAAATGAGGAGAAGCACT+TGG | 0.587731 | 4.2:+45130112 | MS.gene08736:CDS |
AAAACAATCTGTTGTTGTCG+AGG | 0.590052 | 4.2:+45129895 | MS.gene08736:CDS |
AGTGCCGCCATCACTAGGCC+AGG | 0.591285 | 4.2:-45130666 | None:intergenic |
TGATAGGCTAATCACTGCCT+GGG | 0.593492 | 4.2:+45129865 | MS.gene08736:CDS |
AGGTTCTTCAAGAAATCTGA+TGG | 0.595494 | 4.2:+45130463 | MS.gene08736:CDS |
GATCCAAACACTCGCCTGCA+TGG | 0.595830 | 4.2:-45129625 | None:intergenic |
GCTATCAGATTTCCCTGCAA+AGG | 0.596907 | 4.2:+45130787 | MS.gene08736:CDS |
ATCATGAATGGTATGATCGA+CGG | 0.597222 | 4.2:-45130083 | None:intergenic |
ATCAGTGCCTGGCCTAGTGA+TGG | 0.597361 | 4.2:+45130659 | MS.gene08736:CDS |
CCTCTGGCTGTAGCTCCCCT+AGG | 0.597493 | 4.2:+45130765 | MS.gene08736:CDS |
TGGGCTTCTACCTACCATGC+AGG | 0.598830 | 4.2:+45129611 | MS.gene08736:CDS |
AGTTGCTGTTGCTGAAGCGA+AGG | 0.599741 | 4.2:+45129649 | MS.gene08736:CDS |
ATACAACAAAGTTGAGACTC+AGG | 0.600306 | 4.2:-45129925 | None:intergenic |
AGGTAGAAGCCCACAACAAG+GGG | 0.602197 | 4.2:-45129601 | None:intergenic |
AGTGCCTGGCCTAGTGATGG+CGG | 0.602593 | 4.2:+45130662 | MS.gene08736:CDS |
TGGCTATAGTTAATACAGAT+GGG | 0.604661 | 4.2:+45130483 | MS.gene08736:CDS |
ATATAAGGCGCAGAGTGAGA+TGG | 0.606811 | 4.2:+45129829 | MS.gene08736:CDS |
ATGCTCAGTAGCACAAGAGC+CGG | 0.609536 | 4.2:-45129777 | None:intergenic |
TTATGTGGCACTAGTGGATG+CGG | 0.613053 | 4.2:+45129359 | MS.gene08736:CDS |
AGCTTGGAGCTAAAATCCAT+GGG | 0.613339 | 4.2:+45131772 | MS.gene08736:CDS |
AGAGGATTGATATCTACTGC+CGG | 0.614754 | 4.2:-45130735 | None:intergenic |
TCTGTGACAGTGCTGTTATG+TGG | 0.616174 | 4.2:+45129344 | MS.gene08736:CDS |
ACTAGATGTGGGTAGTGATG+AGG | 0.619136 | 4.2:+45131145 | MS.gene08736:CDS |
AAACAATCTGTTGTTGTCGA+GGG | 0.619927 | 4.2:+45129896 | MS.gene08736:CDS |
ATTGATGATCAACTAGATGT+GGG | 0.626575 | 4.2:+45131134 | MS.gene08736:CDS |
AATATGAATAATCATGGTGG+TGG | 0.627156 | 4.2:+45126861 | None:intergenic |
GATGCCACTGCTATTGGCAC+CGG | 0.627411 | 4.2:-45131843 | None:intergenic |
TAGGTAGAAGCCCACAACAA+GGG | 0.628255 | 4.2:-45129602 | None:intergenic |
AGAATACGATGATCTTGCAA+TGG | 0.631276 | 4.2:+45131680 | MS.gene08736:CDS |
TACAGGCCAAGCCTTTGCCA+CGG | 0.633998 | 4.2:-45130507 | None:intergenic |
ATCAGATTTCCCTGCAAAGG+AGG | 0.635106 | 4.2:+45130790 | MS.gene08736:CDS |
TTGACGAGTCCAGAGCTGAT+GGG | 0.638185 | 4.2:+45130705 | MS.gene08736:CDS |
ACCAAGGATGAAGCAACTGA+TGG | 0.638325 | 4.2:+45129716 | MS.gene08736:CDS |
GCGTGCCAAATATATGACAC+TGG | 0.639092 | 4.2:+45130148 | MS.gene08736:CDS |
GATACACGGACATCAGAGAC+CGG | 0.644283 | 4.2:+45129758 | MS.gene08736:CDS |
GTTAGAAAATGGTTATTGGT+CGG | 0.644580 | 4.2:+45131710 | MS.gene08736:CDS |
AATCACGACAGTCGTATCAA+CGG | 0.646353 | 4.2:+45129532 | MS.gene08736:CDS |
AGGACCCAAATACTTGTACT+CGG | 0.647808 | 4.2:-45128932 | None:intergenic |
TGATGGCGGCACTAGTTATG+CGG | 0.647856 | 4.2:+45130676 | MS.gene08736:CDS |
GCAGGTTGGATCTATTGATG+AGG | 0.649156 | 4.2:+45131638 | MS.gene08736:intron |
AGTTAATACAGATGGGTCCG+TGG | 0.655595 | 4.2:+45130490 | MS.gene08736:CDS |
TGAGCCGGTGCCAATAGCAG+TGG | 0.663796 | 4.2:+45131839 | MS.gene08736:CDS |
GTAGGTAGAAGCCCACAACA+AGG | 0.664341 | 4.2:-45129603 | None:intergenic |
TCTGCTTTACCAATCCGTAA+GGG | 0.667480 | 4.2:-45130605 | None:intergenic |
CCTAGGGGAGCTACAGCCAG+AGG | 0.671608 | 4.2:-45130765 | None:intergenic |
TGACAAAGAAGTCGACGATG+AGG | 0.682268 | 4.2:+45131184 | MS.gene08736:CDS |
AGTAATGGGAAGTCCATATG+TGG | 0.683707 | 4.2:+45130542 | MS.gene08736:CDS |
TGTGTCACAATCACTTACCA+AGG | 0.687646 | 4.2:+45129700 | MS.gene08736:CDS |
ATTCTAGCAAACCTGATACA+CGG | 0.700620 | 4.2:+45129744 | MS.gene08736:CDS |
TACCAGTATTGCAGACAACG+TGG | 0.708010 | 4.2:-45129387 | None:intergenic |
AGGGAAATCTGATAGCCTAG+GGG | 0.762964 | 4.2:-45130780 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAAAAAAAAAACGAAATAA+AGG | - | chr4.2:45127715-45127734 | None:intergenic | 10.0% |
!!! | AGATTTTTTATTTTGTTTAA+AGG | + | chr4.2:45127161-45127180 | MS.gene08736:intron | 10.0% |
!! | AATTAAAATAACAACAAAAG+AGG | - | chr4.2:45130974-45130993 | None:intergenic | 15.0% |
!! | GTATTTATTTGATTATGAAA+GGG | + | chr4.2:45128154-45128173 | MS.gene08736:intron | 15.0% |
!! | TATTTATTTGATTATGAAAG+GGG | + | chr4.2:45128155-45128174 | MS.gene08736:intron | 15.0% |
!! | TGTATTTATTTGATTATGAA+AGG | + | chr4.2:45128153-45128172 | MS.gene08736:intron | 15.0% |
!!! | GTTTTTTTTTTATTTTGACT+AGG | + | chr4.2:45127722-45127741 | MS.gene08736:intron | 15.0% |
!!! | TGAATTTGATATGAATTTTA+TGG | + | chr4.2:45127465-45127484 | MS.gene08736:intron | 15.0% |
!! | AACATTTGTATTGTTTACTT+TGG | - | chr4.2:45130264-45130283 | None:intergenic | 20.0% |
!! | AATGGAATAATAGATTATAG+TGG | + | chr4.2:45128128-45128147 | MS.gene08736:intron | 20.0% |
!! | ACATTTGTATTGTTTACTTT+GGG | - | chr4.2:45130263-45130282 | None:intergenic | 20.0% |
!! | AGAAAGAAAAAAAATAACGA+AGG | - | chr4.2:45129971-45129990 | None:intergenic | 20.0% |
!! | ATTTATTTGATTATGAAAGG+GGG | + | chr4.2:45128156-45128175 | MS.gene08736:intron | 20.0% |
!! | CAAATTCAGTAAAAAAGAAA+AGG | - | chr4.2:45127453-45127472 | None:intergenic | 20.0% |
!! | TCAGATTATTAGATCAATAT+AGG | - | chr4.2:45129019-45129038 | None:intergenic | 20.0% |
!! | TTATTTATATCTTCACTTCA+GGG | + | chr4.2:45129497-45129516 | MS.gene08736:intron | 20.0% |
!! | TTTATTTATATCTTCACTTC+AGG | + | chr4.2:45129496-45129515 | MS.gene08736:intron | 20.0% |
!!! | AATGTTTAAGATTTATGTTC+AGG | + | chr4.2:45127495-45127514 | MS.gene08736:intron | 20.0% |
!!! | ACATTTTTTCATATCTTTAC+CGG | + | chr4.2:45128992-45129011 | MS.gene08736:intron | 20.0% |
!!! | ATAGATTAATTTGAAGTGAT+GGG | + | chr4.2:45128539-45128558 | MS.gene08736:intron | 20.0% |
!!! | ATTAGCTTATGGAATTTTTA+TGG | + | chr4.2:45128509-45128528 | MS.gene08736:intron | 20.0% |
!!! | ATTGAAGCAATGAATTTTAT+TGG | + | chr4.2:45128484-45128503 | MS.gene08736:intron | 20.0% |
!!! | TAAATTTGGTTGATAGTAAT+GGG | + | chr4.2:45130528-45130547 | MS.gene08736:CDS | 20.0% |
!!! | TCTAGTTTTTACTTATTTTG+TGG | + | chr4.2:45129436-45129455 | MS.gene08736:intron | 20.0% |
!!! | TTGTCATTTAATATTCTTCT+GGG | + | chr4.2:45127655-45127674 | MS.gene08736:intron | 20.0% |
!!! | TTTGTCATTTAATATTCTTC+TGG | + | chr4.2:45127654-45127673 | MS.gene08736:intron | 20.0% |
!!! | TTTTATTGGTAATTAGCTTA+TGG | + | chr4.2:45128498-45128517 | MS.gene08736:intron | 20.0% |
! | AGATTATTATTGTTAGTGAC+TGG | - | chr4.2:45130028-45130047 | None:intergenic | 25.0% |
! | ATGTGTTAGAAAATGGTTAT+TGG | + | chr4.2:45131706-45131725 | MS.gene08736:CDS | 25.0% |
! | CAAAAAGAAAGCAAAAAAGA+TGG | + | chr4.2:45129673-45129692 | MS.gene08736:CDS | 25.0% |
! | CATATCTGATAAGAAGAAAA+CGG | - | chr4.2:45128706-45128725 | None:intergenic | 25.0% |
! | CCTCATAAAAATTCATAACA+TGG | - | chr4.2:45128210-45128229 | None:intergenic | 25.0% |
! | CTGAGAAAAAGAAAATAATC+AGG | - | chr4.2:45129305-45129324 | None:intergenic | 25.0% |
! | TTACTATCAACCAAATTTAC+AGG | - | chr4.2:45130527-45130546 | None:intergenic | 25.0% |
! | TTTATTTGATTATGAAAGGG+GGG | + | chr4.2:45128157-45128176 | MS.gene08736:intron | 25.0% |
! | TTTGTAATGTAGATCATGAA+TGG | - | chr4.2:45130098-45130117 | None:intergenic | 25.0% |
! | TTTGTGTTCAACATTAAACT+GGG | + | chr4.2:45130837-45130856 | MS.gene08736:intron | 25.0% |
!! | AAGAGAACGTTTTCTTAATT+TGG | - | chr4.2:45131943-45131962 | None:intergenic | 25.0% |
!! | CCATGTTATGAATTTTTATG+AGG | + | chr4.2:45128207-45128226 | MS.gene08736:intron | 25.0% |
!! | GATAATAAGACTAGTTATTG+CGG | + | chr4.2:45128339-45128358 | MS.gene08736:intron | 25.0% |
!! | GATAGATTAATTTGAAGTGA+TGG | + | chr4.2:45128538-45128557 | MS.gene08736:intron | 25.0% |
!! | GTTTTTATTACATAGATGAC+CGG | + | chr4.2:45127613-45127632 | MS.gene08736:intron | 25.0% |
!! | TTATGAATTTTTATGAGGCA+CGG | + | chr4.2:45128212-45128231 | MS.gene08736:intron | 25.0% |
!! | TTTTATGTCTTTAGACAAAG+TGG | - | chr4.2:45127932-45127951 | None:intergenic | 25.0% |
!! | TTTTGTGTTCAACATTAAAC+TGG | + | chr4.2:45130836-45130855 | MS.gene08736:intron | 25.0% |
!!! | AATCTTCAGTTTGGTTTTTA+TGG | + | chr4.2:45130635-45130654 | MS.gene08736:CDS | 25.0% |
!!! | CATCTTTTTTGCTTTCTTTT+TGG | - | chr4.2:45129675-45129694 | None:intergenic | 25.0% |
!!! | CATTTTTTCATATCTTTACC+GGG | + | chr4.2:45128993-45129012 | MS.gene08736:intron | 25.0% |
!!! | GTAAATTTGGTTGATAGTAA+TGG | + | chr4.2:45130527-45130546 | MS.gene08736:CDS | 25.0% |
!!! | GTAGATTTTTGGTTTTATGT+TGG | + | chr4.2:45131206-45131225 | MS.gene08736:intron | 25.0% |
!!! | GTTTTTACTTATTTTGTGGT+AGG | + | chr4.2:45129440-45129459 | MS.gene08736:intron | 25.0% |
!!! | TTGAGGACATTTTTTGTTTT+TGG | + | chr4.2:45127551-45127570 | MS.gene08736:intron | 25.0% |
AAACCAAACTGAAGATTTAC+AGG | - | chr4.2:45130632-45130651 | None:intergenic | 30.0% | |
AAACCCATTGAACCATTAAA+GGG | - | chr4.2:45127776-45127795 | None:intergenic | 30.0% | |
AAATGACAAAACCAAACAAC+AGG | - | chr4.2:45127644-45127663 | None:intergenic | 30.0% | |
AAATTGCAAGTTGTCTTCTT+AGG | + | chr4.2:45127970-45127989 | MS.gene08736:intron | 30.0% | |
AATCTGAATAATCATGCAGA+TGG | + | chr4.2:45130043-45130062 | MS.gene08736:intron | 30.0% | |
AATGGCTATTGAAGGATATA+AGG | + | chr4.2:45129814-45129833 | MS.gene08736:CDS | 30.0% | |
AATTGTGTACTGAACTCATT+CGG | + | chr4.2:45129201-45129220 | MS.gene08736:intron | 30.0% | |
ACAACAAAAGAGGATAGATA+TGG | - | chr4.2:45130964-45130983 | None:intergenic | 30.0% | |
AGAGTTTCAACTTCAATCTT+TGG | + | chr4.2:45131309-45131328 | MS.gene08736:intron | 30.0% | |
ATCCATGTGATAAAATTTGC+CGG | + | chr4.2:45131281-45131300 | MS.gene08736:intron | 30.0% | |
ATCTGAATAATCATGCAGAT+GGG | + | chr4.2:45130044-45130063 | MS.gene08736:intron | 30.0% | |
ATGATTAGATTGTCTTTCCA+TGG | + | chr4.2:45129115-45129134 | MS.gene08736:intron | 30.0% | |
ATGGAAGATGTGTTAGAAAA+TGG | + | chr4.2:45131699-45131718 | MS.gene08736:CDS | 30.0% | |
ATGGCTATAGTTAATACAGA+TGG | + | chr4.2:45130482-45130501 | MS.gene08736:CDS | 30.0% | |
ATTATTATCAGTGTTGTGTC+TGG | - | chr4.2:45131479-45131498 | None:intergenic | 30.0% | |
ATTGACAAAGACAAAGACAA+AGG | + | chr4.2:45126945-45126964 | MS.gene08736:intron | 30.0% | |
CATGATCTACATTACAAATG+AGG | + | chr4.2:45130100-45130119 | MS.gene08736:CDS | 30.0% | |
CTATTGTCCATGTAGTATTT+AGG | - | chr4.2:45128243-45128262 | None:intergenic | 30.0% | |
GAGTTTCAACTTCAATCTTT+GGG | + | chr4.2:45131310-45131329 | MS.gene08736:intron | 30.0% | |
GTACTATTCAAAACATAGCT+CGG | - | chr4.2:45131439-45131458 | None:intergenic | 30.0% | |
GTTAGAAAATGGTTATTGGT+CGG | + | chr4.2:45131710-45131729 | MS.gene08736:CDS | 30.0% | |
TAACAAGACAATAACACCAA+CGG | - | chr4.2:45127112-45127131 | None:intergenic | 30.0% | |
TAATAATCTGAATAGAAGCG+AGG | + | chr4.2:45129028-45129047 | MS.gene08736:intron | 30.0% | |
TACTGTAACAGTTGTTTATG+AGG | + | chr4.2:45130373-45130392 | MS.gene08736:CDS | 30.0% | |
TCTTGAGCATAGTTCATAAT+AGG | + | chr4.2:45128602-45128621 | MS.gene08736:intron | 30.0% | |
TGGCTATAGTTAATACAGAT+GGG | + | chr4.2:45130483-45130502 | MS.gene08736:CDS | 30.0% | |
TTATTAGATCAATATAGGCC+CGG | - | chr4.2:45129014-45129033 | None:intergenic | 30.0% | |
! | AATTTGGATTTGCCATTTGA+TGG | - | chr4.2:45131927-45131946 | None:intergenic | 30.0% |
! | ACTGTTACAGTATTTCTAAC+AGG | - | chr4.2:45130365-45130384 | None:intergenic | 30.0% |
! | ATTGATGATCAACTAGATGT+GGG | + | chr4.2:45131134-45131153 | MS.gene08736:CDS | 30.0% |
! | CAAAAACATATTTCTGACTG+TGG | + | chr4.2:45129051-45129070 | MS.gene08736:intron | 30.0% |
! | GTGGTTTTTGTTACATTTTG+AGG | + | chr4.2:45127573-45127592 | MS.gene08736:intron | 30.0% |
! | TAAGATTTATGTTCAGGTTC+TGG | + | chr4.2:45127501-45127520 | MS.gene08736:intron | 30.0% |
! | TTAGTGTAGTGGAAAATTTG+AGG | + | chr4.2:45127534-45127553 | MS.gene08736:intron | 30.0% |
! | TTTCAGTTGATTCAGAGAAA+AGG | + | chr4.2:45130443-45130462 | MS.gene08736:CDS | 30.0% |
! | TTTCTTGTTTATTTAGCGCA+AGG | + | chr4.2:45130994-45131013 | MS.gene08736:intron | 30.0% |
!! | ATTTGAAGTGATGGGTTATT+TGG | + | chr4.2:45128547-45128566 | MS.gene08736:intron | 30.0% |
!! | GATTTTAGGTATTAGTGTAG+TGG | + | chr4.2:45127523-45127542 | MS.gene08736:intron | 30.0% |
!! | TTAGGAAACCAATCACTTTT+GGG | + | chr4.2:45128805-45128824 | MS.gene08736:CDS | 30.0% |
!!! | AGGACATTTTTTGTTTTTGG+TGG | + | chr4.2:45127554-45127573 | MS.gene08736:intron | 30.0% |
!!! | AGGTTTTAACTCTCATTGTA+AGG | - | chr4.2:45128632-45128651 | None:intergenic | 30.0% |
!!! | GGTTTTAACTCTCATTGTAA+GGG | - | chr4.2:45128631-45128650 | None:intergenic | 30.0% |
!!! | TGAGGACTTTTTGTTTTTGA+TGG | + | chr4.2:45127591-45127610 | MS.gene08736:intron | 30.0% |
!!! | TTCACATACTTGTTTTTAGC+AGG | - | chr4.2:45130176-45130195 | None:intergenic | 30.0% |
AAAACAATCTGTTGTTGTCG+AGG | + | chr4.2:45129895-45129914 | MS.gene08736:CDS | 35.0% | |
AAACAATCTGTTGTTGTCGA+GGG | + | chr4.2:45129896-45129915 | MS.gene08736:CDS | 35.0% | |
AAAGAAGGATAAGCGCAAAA+GGG | - | chr4.2:45131876-45131895 | None:intergenic | 35.0% | |
AAAGACTAAGCTTGATGTTG+TGG | + | chr4.2:45131749-45131768 | MS.gene08736:CDS | 35.0% | |
AACCCATTGAACCATTAAAG+GGG | - | chr4.2:45127775-45127794 | None:intergenic | 35.0% | |
AAGAAAGCAAAAAAGATGGC+TGG | + | chr4.2:45129677-45129696 | MS.gene08736:CDS | 35.0% | |
AGAATACGATGATCTTGCAA+TGG | + | chr4.2:45131680-45131699 | MS.gene08736:CDS | 35.0% | |
AGATATTGTATGCGATGCTT+TGG | + | chr4.2:45128909-45128928 | MS.gene08736:CDS | 35.0% | |
AGGATCCAGTGTCATATATT+TGG | - | chr4.2:45130156-45130175 | None:intergenic | 35.0% | |
AGGTTCTTCAAGAAATCTGA+TGG | + | chr4.2:45130463-45130482 | MS.gene08736:CDS | 35.0% | |
ATACAACAAAGTTGAGACTC+AGG | - | chr4.2:45129928-45129947 | None:intergenic | 35.0% | |
ATCAATTTCAATAGCCCAAC+TGG | - | chr4.2:45127327-45127346 | None:intergenic | 35.0% | |
ATCACATTCTATAGTTGCAG+AGG | - | chr4.2:45128275-45128294 | None:intergenic | 35.0% | |
ATCATGAATGGTATGATCGA+CGG | - | chr4.2:45130086-45130105 | None:intergenic | 35.0% | |
ATGACGTTGGGTTATCAATT+GGG | + | chr4.2:45131401-45131420 | MS.gene08736:intron | 35.0% | |
ATTCTAGCAAACCTGATACA+CGG | + | chr4.2:45129744-45129763 | MS.gene08736:CDS | 35.0% | |
CAAACCCATTGAACCATTAA+AGG | - | chr4.2:45127777-45127796 | None:intergenic | 35.0% | |
CCAAAACAAATGGCTATTGA+AGG | + | chr4.2:45129806-45129825 | MS.gene08736:CDS | 35.0% | |
GAAGTTGAAACTCTTCTATC+CGG | - | chr4.2:45131303-45131322 | None:intergenic | 35.0% | |
GAGAAGAAACTACCATCAAA+TGG | + | chr4.2:45131912-45131931 | MS.gene08736:CDS | 35.0% | |
GCAATCTTGATTCACTTGAA+TGG | + | chr4.2:45128110-45128129 | MS.gene08736:intron | 35.0% | |
GCATATAACATTGCAAAGCT+TGG | - | chr4.2:45129156-45129175 | None:intergenic | 35.0% | |
GGTAGAACCTAAATACTACA+TGG | + | chr4.2:45128233-45128252 | MS.gene08736:intron | 35.0% | |
GGTCAAGAAAATGTAAACCA+TGG | - | chr4.2:45129135-45129154 | None:intergenic | 35.0% | |
TATCCTTACCCAAAAGTGAT+TGG | - | chr4.2:45128816-45128835 | None:intergenic | 35.0% | |
TATGCTGCACATGATTGTTA+GGG | + | chr4.2:45130860-45130879 | MS.gene08736:intron | 35.0% | |
TCAAATTTACCTCCTTTGCA+GGG | - | chr4.2:45130802-45130821 | None:intergenic | 35.0% | |
TCAAGTGAATCAAGATTGCT+AGG | - | chr4.2:45128109-45128128 | None:intergenic | 35.0% | |
TCAATTTCAATAGCCCAACT+GGG | - | chr4.2:45127326-45127345 | None:intergenic | 35.0% | |
TCTCTTAGTATTCCTGCATT+AGG | + | chr4.2:45131957-45131976 | MS.gene08736:CDS | 35.0% | |
TCTGAATAATCATGCAGATG+GGG | + | chr4.2:45130045-45130064 | MS.gene08736:intron | 35.0% | |
TGAAAAAATGTGTTACCTGC+AGG | - | chr4.2:45128983-45129002 | None:intergenic | 35.0% | |
TGATAAGAGGATAGATATGC+TGG | - | chr4.2:45130895-45130914 | None:intergenic | 35.0% | |
TGATTGATCATGAAAACCGT+TGG | + | chr4.2:45127093-45127112 | MS.gene08736:intron | 35.0% | |
TTCAAATTTACCTCCTTTGC+AGG | - | chr4.2:45130803-45130822 | None:intergenic | 35.0% | |
TTCTAACAGGATCGTATAGT+TGG | - | chr4.2:45130352-45130371 | None:intergenic | 35.0% | |
! | AATTGATAACCCAACGTCAT+GGG | - | chr4.2:45131401-45131420 | None:intergenic | 35.0% |
! | ATCCGGCAAATTTTATCACA+TGG | - | chr4.2:45131286-45131305 | None:intergenic | 35.0% |
! | CAAGTGTTGCAGTTCAATAA+TGG | + | chr4.2:45129468-45129487 | MS.gene08736:intron | 35.0% |
! | CAGAGTACTCTGCAAATTAT+GGG | + | chr4.2:45127002-45127021 | MS.gene08736:intron | 35.0% |
! | CCTTCAATAGCCATTTGTTT+TGG | - | chr4.2:45129809-45129828 | None:intergenic | 35.0% |
! | CTTAGGAAACCAATCACTTT+TGG | + | chr4.2:45128804-45128823 | MS.gene08736:CDS | 35.0% |
! | CTTTAATGGTTCAATGGGTT+TGG | + | chr4.2:45127775-45127794 | MS.gene08736:intron | 35.0% |
! | GAACTATGTTTTCCTAATGC+AGG | - | chr4.2:45131972-45131991 | None:intergenic | 35.0% |
! | GATTGATGATCAACTAGATG+TGG | + | chr4.2:45131133-45131152 | MS.gene08736:CDS | 35.0% |
! | GTAGTTTCTCTAGAAGACTT+AGG | + | chr4.2:45128787-45128806 | MS.gene08736:CDS | 35.0% |
! | TAAGGAATTGGTCGAGATTT+TGG | - | chr4.2:45131809-45131828 | None:intergenic | 35.0% |
!! | AAACCAATCACTTTTGGGTA+AGG | + | chr4.2:45128810-45128829 | MS.gene08736:CDS | 35.0% |
!! | CACTTCTAGTTCTAAGGAAT+TGG | - | chr4.2:45131821-45131840 | None:intergenic | 35.0% |
!! | TACCATTCGAGTTGTACAAA+AGG | + | chr4.2:45128851-45128870 | MS.gene08736:CDS | 35.0% |
!!! | ATAGCCATTTGTTTTGGACT+TGG | - | chr4.2:45129803-45129822 | None:intergenic | 35.0% |
!!! | ATGTTCAGGTTCTGGATTTT+AGG | + | chr4.2:45127509-45127528 | MS.gene08736:intron | 35.0% |
AAAGGCTTGGCCTGTAAATT+TGG | + | chr4.2:45130514-45130533 | MS.gene08736:CDS | 40.0% | |
AACCAAACAACAGGTCAAAC+CGG | - | chr4.2:45127635-45127654 | None:intergenic | 40.0% | |
AACTCACACAGACAACTTTG+AGG | - | chr4.2:45127896-45127915 | None:intergenic | 40.0% | |
AATCACGACAGTCGTATCAA+CGG | + | chr4.2:45129532-45129551 | MS.gene08736:CDS | 40.0% | |
ACCCATTGAACCATTAAAGG+GGG | - | chr4.2:45127774-45127793 | None:intergenic | 40.0% | |
ACTTCTCATCATGTGCCTAA+TGG | - | chr4.2:45129561-45129580 | None:intergenic | 40.0% | |
AGAGGATTGATATCTACTGC+CGG | - | chr4.2:45130738-45130757 | None:intergenic | 40.0% | |
AGATGCATCAAGATAGAGCA+AGG | - | chr4.2:45130941-45130960 | None:intergenic | 40.0% | |
AGCTTGGAGCTAAAATCCAT+GGG | + | chr4.2:45131772-45131791 | MS.gene08736:CDS | 40.0% | |
AGGACCCAAATACTTGTACT+CGG | - | chr4.2:45128935-45128954 | None:intergenic | 40.0% | |
ATATTACCACTGCTTGCAAG+AGG | - | chr4.2:45131350-45131369 | None:intergenic | 40.0% | |
ATCAATTTCAGTAGCCCATC+TGG | - | chr4.2:45127234-45127253 | None:intergenic | 40.0% | |
ATCCAATGTATGGTCCCTTA+CGG | + | chr4.2:45130591-45130610 | MS.gene08736:CDS | 40.0% | |
CAAAGAAGGATAAGCGCAAA+AGG | - | chr4.2:45131877-45131896 | None:intergenic | 40.0% | |
CAATCCTCTTATCAATCCTC+TGG | + | chr4.2:45130749-45130768 | MS.gene08736:CDS | 40.0% | |
CAGCATATGCTCTGATGTAA+TGG | + | chr4.2:45129077-45129096 | MS.gene08736:intron | 40.0% | |
CATGACGTTGGGTTATCAAT+TGG | + | chr4.2:45131400-45131419 | MS.gene08736:intron | 40.0% | |
CCAAAGTTGTGCTTACAATG+AGG | - | chr4.2:45128652-45128671 | None:intergenic | 40.0% | |
CCAACTAGGATTGGAACAAA+TGG | - | chr4.2:45128080-45128099 | None:intergenic | 40.0% | |
CCATTTGTTCCAATCCTAGT+TGG | + | chr4.2:45128077-45128096 | MS.gene08736:intron | 40.0% | |
CCTCATTGTAAGCACAACTT+TGG | + | chr4.2:45128649-45128668 | MS.gene08736:intron | 40.0% | |
CCTGCAACGCAAAATACAAA+AGG | - | chr4.2:45131623-45131642 | None:intergenic | 40.0% | |
CCTGGATTGTTCTGATGTTT+CGG | - | chr4.2:45130205-45130224 | None:intergenic | 40.0% | |
CTATCCTCTTATCAATCCTC+TGG | + | chr4.2:45130901-45130920 | MS.gene08736:intron | 40.0% | |
GAGCCTGTAAATCTTCAGTT+TGG | + | chr4.2:45130626-45130645 | MS.gene08736:CDS | 40.0% | |
GCATCCAAGTCCAAAACAAA+TGG | + | chr4.2:45129796-45129815 | MS.gene08736:CDS | 40.0% | |
GTAGCTCAAAGAAGAGTTCT+CGG | + | chr4.2:45131091-45131110 | MS.gene08736:intron | 40.0% | |
GTATGCTGCACATGATTGTT+AGG | + | chr4.2:45130859-45130878 | MS.gene08736:intron | 40.0% | |
GTGAATCAAGATTGCTAGGA+AGG | - | chr4.2:45128105-45128124 | None:intergenic | 40.0% | |
TCAATTTCAGTAGCCCATCT+GGG | - | chr4.2:45127233-45127252 | None:intergenic | 40.0% | |
TCCTTTCGAGCTCAAAGAAT+TGG | - | chr4.2:45130420-45130439 | None:intergenic | 40.0% | |
TCTAGAGAAACTACTGCATC+AGG | - | chr4.2:45128781-45128800 | None:intergenic | 40.0% | |
TCTCAGACTTCGTGAAAAGA+AGG | + | chr4.2:45129319-45129338 | MS.gene08736:intron | 40.0% | |
TCTGCTTTACCAATCCGTAA+GGG | - | chr4.2:45130608-45130627 | None:intergenic | 40.0% | |
TGCACATGATTGTTAGGGTT+AGG | + | chr4.2:45130865-45130884 | MS.gene08736:intron | 40.0% | |
TGGTGATTGACAGTCTTGAT+AGG | + | chr4.2:45129849-45129868 | MS.gene08736:CDS | 40.0% | |
TGTGTCACAATCACTTACCA+AGG | + | chr4.2:45129700-45129719 | MS.gene08736:CDS | 40.0% | |
TTGGCCGAGTACAAGTATTT+GGG | + | chr4.2:45128928-45128947 | MS.gene08736:CDS | 40.0% | |
TTTGGCCGAGTACAAGTATT+TGG | + | chr4.2:45128927-45128946 | MS.gene08736:CDS | 40.0% | |
TTTGGCGGTATTTAATCCCA+TGG | - | chr4.2:45131791-45131810 | None:intergenic | 40.0% | |
! | AGATTGTTTTCGTTCTTCCC+AGG | - | chr4.2:45129885-45129904 | None:intergenic | 40.0% |
! | AGTAATGGGAAGTCCATATG+TGG | + | chr4.2:45130542-45130561 | MS.gene08736:CDS | 40.0% |
! | CAATTGATAACCCAACGTCA+TGG | - | chr4.2:45131402-45131421 | None:intergenic | 40.0% |
! | CCTTTTGTATTTTGCGTTGC+AGG | + | chr4.2:45131620-45131639 | MS.gene08736:intron | 40.0% |
! | CTCTTTTCAGCAAGCAAAGA+AGG | - | chr4.2:45131891-45131910 | None:intergenic | 40.0% |
! | GAGAAGTTTTGCTAGTGAGA+AGG | + | chr4.2:45129574-45129593 | MS.gene08736:CDS | 40.0% |
! | GCAGAGTACTCTGCAAATTA+TGG | + | chr4.2:45127001-45127020 | MS.gene08736:intron | 40.0% |
! | GGCGACATGGATTTTATAGT+TGG | + | chr4.2:45128360-45128379 | MS.gene08736:intron | 40.0% |
! | GTTTTTATGGAATCAGTGCC+TGG | + | chr4.2:45130648-45130667 | MS.gene08736:CDS | 40.0% |
! | TCGACGATGAGGTAGATTTT+TGG | + | chr4.2:45131195-45131214 | MS.gene08736:intron | 40.0% |
! | TCGTATCAACGGATTCCATT+AGG | + | chr4.2:45129543-45129562 | MS.gene08736:CDS | 40.0% |
! | TTCTCTTTTCCCATGACGTT+GGG | + | chr4.2:45131389-45131408 | MS.gene08736:intron | 40.0% |
! | TTGTATTTTGCGTTGCAGGT+TGG | + | chr4.2:45131624-45131643 | MS.gene08736:intron | 40.0% |
!! | TACAAATGAGGAGAAGCACT+TGG | + | chr4.2:45130112-45130131 | MS.gene08736:CDS | 40.0% |
!! | TTTAACTTGCACCCAGATCA+CGG | + | chr4.2:45128032-45128051 | MS.gene08736:intron | 40.0% |
AAGCTTGATGTTGTGGAGCT+TGG | + | chr4.2:45131756-45131775 | MS.gene08736:CDS | 45.0% | |
ACAGCCAGAGGATTGATAAG+AGG | - | chr4.2:45130756-45130775 | None:intergenic | 45.0% | |
ACCAAGGATGAAGCAACTGA+TGG | + | chr4.2:45129716-45129735 | MS.gene08736:CDS | 45.0% | |
ACCATCAGTTGCTTCATCCT+TGG | - | chr4.2:45129720-45129739 | None:intergenic | 45.0% | |
ACTAGATGTGGGTAGTGATG+AGG | + | chr4.2:45131145-45131164 | MS.gene08736:CDS | 45.0% | |
ACTGCCAGAGGATTGATAAG+AGG | - | chr4.2:45130908-45130927 | None:intergenic | 45.0% | |
AGAAGGAAAACCCCTTGTTG+TGG | + | chr4.2:45129591-45129610 | MS.gene08736:CDS | 45.0% | |
AGGGAAATCTGATAGCCTAG+GGG | - | chr4.2:45130783-45130802 | None:intergenic | 45.0% | |
AGGGGGGATTTATGTTGATC+AGG | + | chr4.2:45128173-45128192 | MS.gene08736:intron | 45.0% | |
AGTTAATACAGATGGGTCCG+TGG | + | chr4.2:45130490-45130509 | MS.gene08736:CDS | 45.0% | |
ATATAAGGCGCAGAGTGAGA+TGG | + | chr4.2:45129829-45129848 | MS.gene08736:CDS | 45.0% | |
ATCAATCCTCTGGCAGTAGT+TGG | + | chr4.2:45130911-45130930 | MS.gene08736:intron | 45.0% | |
ATCAGATTTCCCTGCAAAGG+AGG | + | chr4.2:45130790-45130809 | MS.gene08736:CDS | 45.0% | |
ATCCACGTTGTCTGCAATAC+TGG | + | chr4.2:45129385-45129404 | MS.gene08736:CDS | 45.0% | |
ATCCGTAAGGGACCATACAT+TGG | - | chr4.2:45130596-45130615 | None:intergenic | 45.0% | |
ATCCTCAATGAAGCTGACCA+CGG | - | chr4.2:45127999-45128018 | None:intergenic | 45.0% | |
ATGTATGGTCCCTTACGGAT+TGG | + | chr4.2:45130596-45130615 | MS.gene08736:CDS | 45.0% | |
CAAAGCTCGACACGCATTTA+AGG | + | chr4.2:45127028-45127047 | MS.gene08736:CDS | 45.0% | |
CAGGGAAATCTGATAGCCTA+GGG | - | chr4.2:45130784-45130803 | None:intergenic | 45.0% | |
CCGAAACATCAGAACAATCC+AGG | + | chr4.2:45130202-45130221 | MS.gene08736:CDS | 45.0% | |
CCTTAGAACTAGAAGTGAGC+CGG | + | chr4.2:45131824-45131843 | MS.gene08736:CDS | 45.0% | |
CTCTGCTTTACCAATCCGTA+AGG | - | chr4.2:45130609-45130628 | None:intergenic | 45.0% | |
GAACCATTAAAGGGGGCAAT+AGG | - | chr4.2:45127767-45127786 | None:intergenic | 45.0% | |
GACAGCTGAAAACAGTTGCA+TGG | - | chr4.2:45130307-45130326 | None:intergenic | 45.0% | |
GAGCTTGGAGCTAAAATCCA+TGG | + | chr4.2:45131771-45131790 | MS.gene08736:CDS | 45.0% | |
GCCAATTCTTTGAGCTCGAA+AGG | + | chr4.2:45130416-45130435 | MS.gene08736:CDS | 45.0% | |
GCCCCCTTTAATGGTTCAAT+GGG | + | chr4.2:45127770-45127789 | MS.gene08736:intron | 45.0% | |
GCGTGCCAAATATATGACAC+TGG | + | chr4.2:45130148-45130167 | MS.gene08736:CDS | 45.0% | |
GCTATCAGATTTCCCTGCAA+AGG | + | chr4.2:45130787-45130806 | MS.gene08736:CDS | 45.0% | |
GCTGAAAACAGTTGCATGGA+TGG | - | chr4.2:45130303-45130322 | None:intergenic | 45.0% | |
GGAATCGGACATCCAATGTA+TGG | + | chr4.2:45130581-45130600 | MS.gene08736:CDS | 45.0% | |
GGCGCACTTCAGTATTTGTT+CGG | + | chr4.2:45128872-45128891 | MS.gene08736:CDS | 45.0% | |
GTAGGACCGGAAAATGGAAT+CGG | + | chr4.2:45130566-45130585 | MS.gene08736:CDS | 45.0% | |
GTTGTCTTCTTAGGTTACCG+TGG | + | chr4.2:45127979-45127998 | MS.gene08736:intron | 45.0% | |
TACCAGTATTGCAGACAACG+TGG | - | chr4.2:45129390-45129409 | None:intergenic | 45.0% | |
TAGGTAGAAGCCCACAACAA+GGG | - | chr4.2:45129605-45129624 | None:intergenic | 45.0% | |
TCAATCCTCTGGCAGTAGTT+GGG | + | chr4.2:45130912-45130931 | MS.gene08736:intron | 45.0% | |
TCACTTCAGGGTAGCAGATT+GGG | + | chr4.2:45129509-45129528 | MS.gene08736:intron | 45.0% | |
TCAGCTGATCCAATCCTTTC+TGG | + | chr4.2:45131990-45132009 | MS.gene08736:CDS | 45.0% | |
TCTTGAGATGCCACTGCTAT+TGG | - | chr4.2:45131852-45131871 | None:intergenic | 45.0% | |
TGACAAAGAAGTCGACGATG+AGG | + | chr4.2:45131184-45131203 | MS.gene08736:CDS | 45.0% | |
TGATAGGCTAATCACTGCCT+GGG | + | chr4.2:45129865-45129884 | MS.gene08736:CDS | 45.0% | |
TGCCCCCTTTAATGGTTCAA+TGG | + | chr4.2:45127769-45127788 | MS.gene08736:intron | 45.0% | |
TTCACTTCAGGGTAGCAGAT+TGG | + | chr4.2:45129508-45129527 | MS.gene08736:intron | 45.0% | |
TTGATAGGCTAATCACTGCC+TGG | + | chr4.2:45129864-45129883 | MS.gene08736:CDS | 45.0% | |
! | AAAGAAGAGTTCTCGGTGCA+TGG | + | chr4.2:45131098-45131117 | MS.gene08736:CDS | 45.0% |
! | CGCCTTTTGTACAACTCGAA+TGG | - | chr4.2:45128856-45128875 | None:intergenic | 45.0% |
! | CTGTTTTCAGCTGTCTTCGA+AGG | + | chr4.2:45130312-45130331 | MS.gene08736:CDS | 45.0% |
! | GAAGGAAAACCCCTTGTTGT+GGG | + | chr4.2:45129592-45129611 | MS.gene08736:CDS | 45.0% |
! | GCAGGTTGGATCTATTGATG+AGG | + | chr4.2:45131638-45131657 | MS.gene08736:intron | 45.0% |
! | GGAATTGGTCGAGATTTTGG+CGG | - | chr4.2:45131806-45131825 | None:intergenic | 45.0% |
! | GGATGTCCGATTCCATTTTC+CGG | - | chr4.2:45130575-45130594 | None:intergenic | 45.0% |
! | GTTCTCTTTTCCCATGACGT+TGG | + | chr4.2:45131388-45131407 | MS.gene08736:intron | 45.0% |
! | TCTGTGACAGTGCTGTTATG+TGG | + | chr4.2:45129344-45129363 | MS.gene08736:CDS | 45.0% |
! | TTATGTGGCACTAGTGGATG+CGG | + | chr4.2:45129359-45129378 | MS.gene08736:CDS | 45.0% |
!! | AGGAAGGTACCAACTAGGAT+TGG | - | chr4.2:45128089-45128108 | None:intergenic | 45.0% |
!! | GATTTTGCTTTTGTGCCCAG+AGG | + | chr4.2:45127189-45127208 | MS.gene08736:intron | 45.0% |
!! | TACGCGTGCTGAAAAGCATT+TGG | + | chr4.2:45130235-45130254 | MS.gene08736:CDS | 45.0% |
!! | TTGCTAGGAAGGTACCAACT+AGG | - | chr4.2:45128094-45128113 | None:intergenic | 45.0% |
ACCAAGTCTGCTCTCTGGTT+AGG | - | chr4.2:45128955-45128974 | None:intergenic | 50.0% | |
AGAGCTGATGGGACTGATAC+CGG | + | chr4.2:45130716-45130735 | MS.gene08736:CDS | 50.0% | |
AGGTAGAAGCCCACAACAAG+GGG | - | chr4.2:45129604-45129623 | None:intergenic | 50.0% | |
ATCTGGGTCAATAAGCCTCG+AGG | - | chr4.2:45127217-45127236 | None:intergenic | 50.0% | |
ATGCTCAGTAGCACAAGAGC+CGG | - | chr4.2:45129780-45129799 | None:intergenic | 50.0% | |
CACGCGTACAGAGATAATCC+TGG | - | chr4.2:45130223-45130242 | None:intergenic | 50.0% | |
CGAGGCTTATTGACCCAGAT+GGG | + | chr4.2:45127217-45127236 | MS.gene08736:intron | 50.0% | |
CGTCCTATTGCCCCCTTTAA+TGG | + | chr4.2:45127761-45127780 | MS.gene08736:intron | 50.0% | |
CTAGAACCAAGTCTGCTCTC+TGG | - | chr4.2:45128960-45128979 | None:intergenic | 50.0% | |
GATACACGGACATCAGAGAC+CGG | + | chr4.2:45129758-45129777 | MS.gene08736:CDS | 50.0% | |
GCAGGGAAATCTGATAGCCT+AGG | - | chr4.2:45130785-45130804 | None:intergenic | 50.0% | |
GCTATTCCTCTTGCAAGCAG+TGG | + | chr4.2:45131341-45131360 | MS.gene08736:intron | 50.0% | |
GCTCACATCAACCGTGATCT+GGG | - | chr4.2:45128046-45128065 | None:intergenic | 50.0% | |
GGGAAGTCCATATGTGGTGT+AGG | + | chr4.2:45130548-45130567 | MS.gene08736:CDS | 50.0% | |
GTAGGTAGAAGCCCACAACA+AGG | - | chr4.2:45129606-45129625 | None:intergenic | 50.0% | |
GTCCATATGTGGTGTAGGAC+CGG | + | chr4.2:45130553-45130572 | MS.gene08736:CDS | 50.0% | |
GTCTCTGATGTCCGTGTATC+AGG | - | chr4.2:45129758-45129777 | None:intergenic | 50.0% | |
TAACTAGTGCCGCCATCACT+AGG | - | chr4.2:45130674-45130693 | None:intergenic | 50.0% | |
TACCGTGGTCAGCTTCATTG+AGG | + | chr4.2:45127994-45128013 | MS.gene08736:intron | 50.0% | |
TCCTAACCAGAGAGCAGACT+TGG | + | chr4.2:45128951-45128970 | MS.gene08736:CDS | 50.0% | |
TCGAGGCTTATTGACCCAGA+TGG | + | chr4.2:45127216-45127235 | MS.gene08736:intron | 50.0% | |
TCTGGGTCAATAAGCCTCGA+GGG | - | chr4.2:45127216-45127235 | None:intergenic | 50.0% | |
TGTGGTGTAGGACCGGAAAA+TGG | + | chr4.2:45130560-45130579 | MS.gene08736:CDS | 50.0% | |
TTAAAGGGGGCAATAGGACG+AGG | - | chr4.2:45127761-45127780 | None:intergenic | 50.0% | |
TTCCGGTCCTACACCACATA+TGG | - | chr4.2:45130558-45130577 | None:intergenic | 50.0% | |
TTCGCTTCAGCAACAGCAAC+TGG | - | chr4.2:45129650-45129669 | None:intergenic | 50.0% | |
TTCTGGTGCTCCTCAAAGGT+AGG | + | chr4.2:45132007-45132026 | MS.gene08736:CDS | 50.0% | |
TTGACGAGTCCAGAGCTGAT+GGG | + | chr4.2:45130705-45130724 | MS.gene08736:CDS | 50.0% | |
! | AGTTGCTGTTGCTGAAGCGA+AGG | + | chr4.2:45129649-45129668 | MS.gene08736:CDS | 50.0% |
! | GACTAGTTATTGCGGCGACA+TGG | + | chr4.2:45128347-45128366 | MS.gene08736:intron | 50.0% |
! | GTGCTGTTATGTGGCACTAG+TGG | + | chr4.2:45129353-45129372 | MS.gene08736:CDS | 50.0% |
! | TCAGTGTTGTGTCTGGAGTC+TGG | - | chr4.2:45131472-45131491 | None:intergenic | 50.0% |
! | TCCTTTCTGGTGCTCCTCAA+AGG | + | chr4.2:45132003-45132022 | MS.gene08736:CDS | 50.0% |
! | TCTGGAGTCTGGTGCTTCAT+AGG | - | chr4.2:45131461-45131480 | None:intergenic | 50.0% |
!! | ACCTTTGAGGAGCACCAGAA+AGG | - | chr4.2:45132007-45132026 | None:intergenic | 50.0% |
!! | CCGGCTCACTTCTAGTTCTA+AGG | - | chr4.2:45131827-45131846 | None:intergenic | 50.0% |
!! | GACCGGTTTGACCTGTTGTT+TGG | + | chr4.2:45127630-45127649 | MS.gene08736:intron | 50.0% |
!! | TGAGGAGCACCAGAAAGGAT+TGG | - | chr4.2:45132002-45132021 | None:intergenic | 50.0% |
!! | TGATGGCGGCACTAGTTATG+CGG | + | chr4.2:45130676-45130695 | MS.gene08736:CDS | 50.0% |
AATAAGCCTCGAGGGACCTC+TGG | - | chr4.2:45127208-45127227 | None:intergenic | 55.0% | |
ATAAGCCTCGAGGGACCTCT+GGG | - | chr4.2:45127207-45127226 | None:intergenic | 55.0% | |
ATCAGTGCCTGGCCTAGTGA+TGG | + | chr4.2:45130659-45130678 | MS.gene08736:CDS | 55.0% | |
CAAACACTCGCCTGCATGGT+AGG | - | chr4.2:45129624-45129643 | None:intergenic | 55.0% | |
CGCTCACATCAACCGTGATC+TGG | - | chr4.2:45128047-45128066 | None:intergenic | 55.0% | |
CTACCATGCAGGCGAGTGTT+TGG | + | chr4.2:45129622-45129641 | MS.gene08736:CDS | 55.0% | |
GATCCAAACACTCGCCTGCA+TGG | - | chr4.2:45129628-45129647 | None:intergenic | 55.0% | |
GATGCCACTGCTATTGGCAC+CGG | - | chr4.2:45131846-45131865 | None:intergenic | 55.0% | |
GGTATCAGTCCCATCAGCTC+TGG | - | chr4.2:45130717-45130736 | None:intergenic | 55.0% | |
GTTGACGAGTCCAGAGCTGA+TGG | + | chr4.2:45130704-45130723 | MS.gene08736:CDS | 55.0% | |
TACAGATGGGTCCGTGGCAA+AGG | + | chr4.2:45130496-45130515 | MS.gene08736:CDS | 55.0% | |
TACAGGCCAAGCCTTTGCCA+CGG | - | chr4.2:45130510-45130529 | None:intergenic | 55.0% | |
TGGGCTTCTACCTACCATGC+AGG | + | chr4.2:45129611-45129630 | MS.gene08736:CDS | 55.0% | |
! | GATGGCGGCACTAGTTATGC+GGG | + | chr4.2:45130677-45130696 | MS.gene08736:CDS | 55.0% |
! | GTCTTCGAAGGCGTGAAGCT+GGG | + | chr4.2:45130324-45130343 | MS.gene08736:CDS | 55.0% |
! | TCTTCGAAGGCGTGAAGCTG+GGG | + | chr4.2:45130325-45130344 | MS.gene08736:CDS | 55.0% |
! | TGTCTTCGAAGGCGTGAAGC+TGG | + | chr4.2:45130323-45130342 | MS.gene08736:CDS | 55.0% |
!! | CAGACTTGGTTCTAGCCTGC+AGG | + | chr4.2:45128965-45128984 | MS.gene08736:CDS | 55.0% |
AGTGCCTGGCCTAGTGATGG+CGG | + | chr4.2:45130662-45130681 | MS.gene08736:CDS | 60.0% | |
ATGGGTCCGTGGCAAAGGCT+TGG | + | chr4.2:45130501-45130520 | MS.gene08736:CDS | 60.0% | |
CGAGTCGCGTCAACCCAGTT+GGG | + | chr4.2:45127310-45127329 | MS.gene08736:intron | 60.0% | |
GGCATCCCAACTACTGCCAG+AGG | - | chr4.2:45130920-45130939 | None:intergenic | 60.0% | |
TCGAGTCGCGTCAACCCAGT+TGG | + | chr4.2:45127309-45127328 | MS.gene08736:intron | 60.0% | |
! | ACTGGGTTGACGCGACTCGA+TGG | - | chr4.2:45127309-45127328 | None:intergenic | 60.0% |
! | TGAGCCGGTGCCAATAGCAG+TGG | + | chr4.2:45131839-45131858 | MS.gene08736:CDS | 60.0% |
AGTGCCGCCATCACTAGGCC+AGG | - | chr4.2:45130669-45130688 | None:intergenic | 65.0% | |
CCTAGGGGAGCTACAGCCAG+AGG | - | chr4.2:45130768-45130787 | None:intergenic | 65.0% | |
CCTCTGGCTGTAGCTCCCCT+AGG | + | chr4.2:45130765-45130784 | MS.gene08736:CDS | 65.0% | |
TTGTGCCCAGAGGTCCCTCG+AGG | + | chr4.2:45127199-45127218 | MS.gene08736:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 45126874 | 45132028 | 45126874 | ID=MS.gene08736 |
chr4.2 | mRNA | 45126874 | 45132028 | 45126874 | ID=MS.gene08736.t1;Parent=MS.gene08736 |
chr4.2 | exon | 45126874 | 45126894 | 45126874 | ID=MS.gene08736.t1.exon1;Parent=MS.gene08736.t1 |
chr4.2 | CDS | 45126874 | 45126894 | 45126874 | ID=cds.MS.gene08736.t1;Parent=MS.gene08736.t1 |
chr4.2 | exon | 45127005 | 45127049 | 45127005 | ID=MS.gene08736.t1.exon2;Parent=MS.gene08736.t1 |
chr4.2 | CDS | 45127005 | 45127049 | 45127005 | ID=cds.MS.gene08736.t1;Parent=MS.gene08736.t1 |
chr4.2 | exon | 45128721 | 45128986 | 45128721 | ID=MS.gene08736.t1.exon3;Parent=MS.gene08736.t1 |
chr4.2 | CDS | 45128721 | 45128986 | 45128721 | ID=cds.MS.gene08736.t1;Parent=MS.gene08736.t1 |
chr4.2 | exon | 45129325 | 45129406 | 45129325 | ID=MS.gene08736.t1.exon4;Parent=MS.gene08736.t1 |
chr4.2 | CDS | 45129325 | 45129406 | 45129325 | ID=cds.MS.gene08736.t1;Parent=MS.gene08736.t1 |
chr4.2 | exon | 45129518 | 45129943 | 45129518 | ID=MS.gene08736.t1.exon5;Parent=MS.gene08736.t1 |
chr4.2 | CDS | 45129518 | 45129943 | 45129518 | ID=cds.MS.gene08736.t1;Parent=MS.gene08736.t1 |
chr4.2 | exon | 45130062 | 45130811 | 45130062 | ID=MS.gene08736.t1.exon6;Parent=MS.gene08736.t1 |
chr4.2 | CDS | 45130062 | 45130811 | 45130062 | ID=cds.MS.gene08736.t1;Parent=MS.gene08736.t1 |
chr4.2 | exon | 45131095 | 45131205 | 45131095 | ID=MS.gene08736.t1.exon7;Parent=MS.gene08736.t1 |
chr4.2 | CDS | 45131095 | 45131205 | 45131095 | ID=cds.MS.gene08736.t1;Parent=MS.gene08736.t1 |
chr4.2 | exon | 45131642 | 45132028 | 45131642 | ID=MS.gene08736.t1.exon8;Parent=MS.gene08736.t1 |
chr4.2 | CDS | 45131642 | 45132028 | 45131642 | ID=cds.MS.gene08736.t1;Parent=MS.gene08736.t1 |
Gene Sequence |
Protein sequence |