Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08974.t1 | XP_003629601.1 | 99.4 | 471 | 3 | 0 | 1 | 471 | 1 | 471 | 7.10E-279 | 969.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08974.t1 | O23254 | 88.7 | 471 | 53 | 0 | 1 | 471 | 1 | 471 | 9.5e-256 | 883.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08974.t1 | G7LH57 | 99.4 | 471 | 3 | 0 | 1 | 471 | 1 | 471 | 5.1e-279 | 969.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05986 | MS.gene08974 | 0.833363 | 5.57E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene08974 | MS.gene86222 | PPI |
| MS.gene08974 | MS.gene002066 | PPI |
| MS.gene08974 | MS.gene44289 | PPI |
| MS.gene08974 | MS.gene29165 | PPI |
| MS.gene08974 | MS.gene027729 | PPI |
| MS.gene08974 | MS.gene047182 | PPI |
| MS.gene08974 | MS.gene00638 | PPI |
| MS.gene08974 | MS.gene072040 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08974.t1 | MTR_8g081510 | 99.363 | 471 | 3 | 0 | 1 | 471 | 1 | 471 | 0.0 | 975 |
| MS.gene08974.t1 | MTR_3g084310 | 93.418 | 471 | 31 | 0 | 1 | 471 | 1 | 471 | 0.0 | 928 |
| MS.gene08974.t1 | MTR_3g084310 | 93.132 | 364 | 25 | 0 | 1 | 364 | 1 | 364 | 0.0 | 720 |
| MS.gene08974.t1 | MTR_2g006570 | 64.224 | 464 | 161 | 1 | 4 | 462 | 128 | 591 | 0.0 | 648 |
| MS.gene08974.t1 | MTR_3g073470 | 63.991 | 461 | 158 | 2 | 7 | 462 | 118 | 575 | 0.0 | 633 |
| MS.gene08974.t1 | MTR_2g006570 | 64.524 | 420 | 144 | 1 | 48 | 462 | 1 | 420 | 0.0 | 587 |
| MS.gene08974.t1 | MTR_5g067060 | 58.030 | 467 | 187 | 5 | 9 | 469 | 42 | 505 | 0.0 | 556 |
| MS.gene08974.t1 | MTR_5g030950 | 58.155 | 466 | 188 | 4 | 9 | 469 | 53 | 516 | 0.0 | 554 |
| MS.gene08974.t1 | MTR_2g018290 | 57.860 | 458 | 173 | 5 | 12 | 461 | 87 | 532 | 0.0 | 537 |
| MS.gene08974.t1 | MTR_7g108420 | 47.380 | 439 | 188 | 9 | 37 | 462 | 1 | 409 | 1.71e-126 | 374 |
| MS.gene08974.t1 | MTR_1g073580 | 35.526 | 152 | 92 | 2 | 317 | 462 | 83 | 234 | 1.60e-22 | 96.7 |
| MS.gene08974.t1 | MTR_1g073580 | 44.318 | 88 | 44 | 2 | 157 | 244 | 1 | 83 | 6.84e-18 | 83.6 |
| MS.gene08974.t1 | MTR_3g062030 | 59.494 | 79 | 28 | 1 | 274 | 352 | 13 | 87 | 3.24e-21 | 92.8 |
| MS.gene08974.t1 | MTR_7g070020 | 53.659 | 82 | 28 | 2 | 336 | 410 | 1 | 79 | 7.85e-20 | 85.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08974.t1 | AT4G13930 | 88.747 | 471 | 53 | 0 | 1 | 471 | 1 | 471 | 0.0 | 889 |
| MS.gene08974.t1 | AT4G13890 | 78.205 | 468 | 102 | 0 | 1 | 468 | 1 | 468 | 0.0 | 794 |
| MS.gene08974.t1 | AT4G13890 | 79.284 | 391 | 81 | 0 | 1 | 391 | 1 | 391 | 0.0 | 674 |
| MS.gene08974.t1 | AT1G36370 | 62.446 | 466 | 170 | 1 | 4 | 464 | 130 | 595 | 0.0 | 629 |
| MS.gene08974.t1 | AT1G22020 | 62.069 | 464 | 171 | 1 | 4 | 462 | 134 | 597 | 0.0 | 623 |
| MS.gene08974.t1 | AT1G22020 | 62.069 | 464 | 171 | 1 | 4 | 462 | 134 | 597 | 0.0 | 623 |
| MS.gene08974.t1 | AT4G32520 | 59.570 | 465 | 169 | 6 | 3 | 461 | 77 | 528 | 0.0 | 567 |
| MS.gene08974.t1 | AT4G32520 | 59.570 | 465 | 169 | 6 | 3 | 461 | 77 | 528 | 0.0 | 567 |
| MS.gene08974.t1 | AT4G37930 | 57.692 | 468 | 191 | 4 | 9 | 471 | 52 | 517 | 0.0 | 565 |
| MS.gene08974.t1 | AT5G26780 | 56.197 | 468 | 198 | 4 | 9 | 471 | 52 | 517 | 0.0 | 546 |
| MS.gene08974.t1 | AT5G26780 | 56.197 | 468 | 198 | 4 | 9 | 471 | 52 | 517 | 0.0 | 546 |
| MS.gene08974.t1 | AT5G26780 | 54.752 | 484 | 196 | 6 | 9 | 471 | 52 | 533 | 0.0 | 537 |
| MS.gene08974.t1 | AT5G26780 | 54.752 | 484 | 196 | 6 | 9 | 471 | 52 | 533 | 0.0 | 537 |
Find 150 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCTCAGGCTGGCCCTTCT+TGG | 0.198683 | 4.4:+14859684 | None:intergenic |
| ATTTGGTATGCCTGGTTTCC+TGG | 0.216412 | 4.4:-14858672 | MS.gene08974:CDS |
| TGGCCCTTCTTGGGTGGTTT+AGG | 0.220073 | 4.4:+14859694 | None:intergenic |
| TAATCCTCATGATCGGATTA+TGG | 0.228344 | 4.4:-14861191 | MS.gene08974:CDS |
| CTTTGAGAGTTTGCCGTATA+AGG | 0.255272 | 4.4:-14861086 | MS.gene08974:CDS |
| TCGATTAGGTCGTGGATCTC+TGG | 0.281015 | 4.4:+14861496 | None:intergenic |
| ACTCATGGTTACTATACTTC+TGG | 0.285243 | 4.4:-14861139 | MS.gene08974:CDS |
| TTCTCAGGCTGGCCCTTCTT+GGG | 0.286161 | 4.4:+14859685 | None:intergenic |
| GAGAAGTTCTCTTCTTCATT+TGG | 0.300016 | 4.4:-14858689 | MS.gene08974:CDS |
| ATTGGGATTATAAACGGTTT+AGG | 0.311040 | 4.4:-14860961 | MS.gene08974:CDS |
| TTGGGATTATAAACGGTTTA+GGG | 0.317920 | 4.4:-14860960 | MS.gene08974:CDS |
| ATGGGATTGGATCTTCCTTC+AGG | 0.332967 | 4.4:-14861172 | MS.gene08974:CDS |
| AATCCTCATGATCGGATTAT+GGG | 0.338677 | 4.4:-14861190 | MS.gene08974:CDS |
| CCTTGCTGTTGCCTTGAAAC+AGG | 0.346168 | 4.4:-14859578 | MS.gene08974:CDS |
| TCATATCGATCCACAATCTT+GGG | 0.348360 | 4.4:-14861275 | MS.gene08974:CDS |
| GAAAAGGACTTTGAGAAGAT+TGG | 0.349310 | 4.4:-14858836 | MS.gene08974:CDS |
| TCTTCTTCATTTGGTATGCC+TGG | 0.356704 | 4.4:-14858680 | MS.gene08974:CDS |
| TTCATATCGATCCACAATCT+TGG | 0.361702 | 4.4:-14861276 | MS.gene08974:CDS |
| TAGTGGCCTTGTTGCTGCTC+AGG | 0.366141 | 4.4:-14860888 | MS.gene08974:intron |
| TTGTGGGATCTTCGCCCTCT+TGG | 0.377790 | 4.4:-14859433 | MS.gene08974:CDS |
| CGATTAGGTCGTGGATCTCT+GGG | 0.381977 | 4.4:+14861497 | None:intergenic |
| TTGTTACCCCATTCGTTAAC+GGG | 0.382478 | 4.4:+14861538 | None:intergenic |
| CCACCGTAGTAACGGTTTCC+CGG | 0.387416 | 4.4:+14861355 | None:intergenic |
| TTCTAGAGGCTTGGTTGAAA+AGG | 0.401166 | 4.4:-14858852 | MS.gene08974:CDS |
| TAGTGCTTACCCTAGGGATT+GGG | 0.404659 | 4.4:-14860978 | MS.gene08974:CDS |
| CATGCCTTCGGAGTATTTGT+TGG | 0.404874 | 4.4:+14861378 | None:intergenic |
| ACAAGAGTTTGAGGGGTCCT+AGG | 0.411398 | 4.4:-14859744 | MS.gene08974:CDS |
| CTAGGGATTGGGATTATAAA+CGG | 0.417514 | 4.4:-14860967 | MS.gene08974:CDS |
| TTGAAACAGGCCATGTCACC+TGG | 0.428213 | 4.4:-14859565 | MS.gene08974:CDS |
| AAATACTCCGAAGGCATGCC+GGG | 0.431184 | 4.4:-14861373 | MS.gene08974:CDS |
| TGCATTGGCCTTAACTTGCT+TGG | 0.435848 | 4.4:+14859528 | None:intergenic |
| GGCCATGTCACCTGGGTTCA+AGG | 0.436813 | 4.4:-14859557 | MS.gene08974:CDS |
| GAAGGATTTCAACAAGGGCT+TGG | 0.437560 | 4.4:-14858750 | MS.gene08974:CDS |
| TTACCAACTCGTACTCCTCC+TGG | 0.440340 | 4.4:+14859227 | None:intergenic |
| TTTGTTACCCCATTCGTTAA+CGG | 0.443616 | 4.4:+14861537 | None:intergenic |
| GGCCATGACTTCTAGAGGCT+TGG | 0.443671 | 4.4:-14858861 | MS.gene08974:CDS |
| TCATGATCGGATTATGGGAT+TGG | 0.447111 | 4.4:-14861185 | MS.gene08974:CDS |
| AGGTGACATGGCCTGTTTCA+AGG | 0.449189 | 4.4:+14859567 | None:intergenic |
| GTAGTGCTTACCCTAGGGAT+TGG | 0.449816 | 4.4:-14860979 | MS.gene08974:CDS |
| GATAGCAGTGCCTTGGCTCC+AGG | 0.451399 | 4.4:-14859245 | MS.gene08974:CDS |
| ACGGTTTCCCGGCATGCCTT+CGG | 0.453815 | 4.4:+14861366 | None:intergenic |
| CAACAGCAAGGGCACCAATC+TGG | 0.454079 | 4.4:+14859590 | None:intergenic |
| GGCATATGCCAAGCAAGTTA+AGG | 0.458758 | 4.4:-14859536 | MS.gene08974:CDS |
| TATGGATCCCGTTAACGAAT+GGG | 0.460396 | 4.4:-14861545 | MS.gene08974:CDS |
| CTTCGCCCTCTTGGATTGAC+TGG | 0.475593 | 4.4:-14859424 | MS.gene08974:intron |
| CAACAACTCACAAGAGTTTG+AGG | 0.475648 | 4.4:-14859753 | MS.gene08974:CDS |
| GTGGTGGTAGTGCTTACCCT+AGG | 0.483011 | 4.4:-14860985 | MS.gene08974:CDS |
| AAATCGTAAACTGCATTCTC+AGG | 0.485003 | 4.4:+14859670 | None:intergenic |
| ATTTCCAATGGCAACTGCAT+TGG | 0.485964 | 4.4:+14859513 | None:intergenic |
| AGTTTGAGGGGTCCTAGGGC+TGG | 0.488241 | 4.4:-14859739 | MS.gene08974:CDS |
| CAAATACTCCGAAGGCATGC+CGG | 0.491638 | 4.4:-14861374 | MS.gene08974:CDS |
| CGTAAACTGCATTCTCAGGC+TGG | 0.492457 | 4.4:+14859674 | None:intergenic |
| CTTCTGAAGGATTTCAACAA+GGG | 0.500755 | 4.4:-14858755 | MS.gene08974:CDS |
| GTCGTCGAATTCACCTTATA+CGG | 0.506731 | 4.4:+14861073 | None:intergenic |
| AAGGCCAATGCAGTTGCCAT+TGG | 0.512235 | 4.4:-14859517 | MS.gene08974:CDS |
| TCAGGCTGGCCCTTCTTGGG+TGG | 0.515292 | 4.4:+14859688 | None:intergenic |
| GGGCTGGAATGATCTTCTAC+AGG | 0.516037 | 4.4:-14859723 | MS.gene08974:CDS |
| GGGACCTAAACCACCCAAGA+AGG | 0.517255 | 4.4:-14859698 | MS.gene08974:CDS |
| TGAGAACCATCTTGTGTTGT+GGG | 0.518139 | 4.4:-14859449 | MS.gene08974:CDS |
| TCAGGTGGACATTTGACTCA+TGG | 0.518530 | 4.4:-14861154 | MS.gene08974:CDS |
| TGGAAATTACTTGATGAGCA+AGG | 0.520445 | 4.4:-14859497 | MS.gene08974:CDS |
| CGTTTATAATCCCAATCCCT+AGG | 0.523617 | 4.4:+14860968 | None:intergenic |
| AGGCCTAGGTTGATTATCTG+TGG | 0.524395 | 4.4:-14861004 | MS.gene08974:CDS |
| GTTAACGTTCAGCCTTACTC+TGG | 0.524720 | 4.4:-14861250 | MS.gene08974:CDS |
| GGATTTCAACAAGGGCTTGG+TGG | 0.525840 | 4.4:-14858747 | MS.gene08974:CDS |
| CAAGAGTTTGAGGGGTCCTA+GGG | 0.529217 | 4.4:-14859743 | MS.gene08974:CDS |
| GTCGTGGATCTCTGGGTCGA+CGG | 0.531722 | 4.4:+14861504 | None:intergenic |
| TTCGCCGGTGAACCAGAGTA+AGG | 0.533517 | 4.4:+14861238 | None:intergenic |
| TAGGTTGGAGGAGAAAGCGT+TGG | 0.534852 | 4.4:-14861032 | MS.gene08974:CDS |
| GGAAATTACTTGATGAGCAA+GGG | 0.542211 | 4.4:-14859496 | MS.gene08974:CDS |
| CACAATGTCACAGTACTCAA+AGG | 0.544775 | 4.4:+14859780 | None:intergenic |
| ACAATGTCACAGTACTCAAA+GGG | 0.547706 | 4.4:+14859781 | None:intergenic |
| TGGTGGTAGTGCTTACCCTA+GGG | 0.548765 | 4.4:-14860984 | MS.gene08974:CDS |
| AACAACTCACAAGAGTTTGA+GGG | 0.550530 | 4.4:-14859752 | MS.gene08974:CDS |
| TATTGATTATGATAGGTTGG+AGG | 0.550910 | 4.4:-14861044 | MS.gene08974:CDS |
| TTGGCATATGCCTTGAACCC+AGG | 0.551473 | 4.4:+14859547 | None:intergenic |
| AAGCTTGAAGAGCGCGTGAA+CGG | 0.551498 | 4.4:+14861299 | None:intergenic |
| TAGAAGATCATTCCAGCCCT+AGG | 0.552646 | 4.4:+14859727 | None:intergenic |
| TGCCTTGAACCCAGGTGACA+TGG | 0.553241 | 4.4:+14859555 | None:intergenic |
| ATTGTGAGGACCACCTTGAA+GGG | 0.554639 | 4.4:+14859615 | None:intergenic |
| CATATCGATCCACAATCTTG+GGG | 0.560138 | 4.4:-14861274 | MS.gene08974:CDS |
| ATTCGTTACCACCGTAGTAA+CGG | 0.560321 | 4.4:+14861347 | None:intergenic |
| TTATGGATCCCGTTAACGAA+TGG | 0.563507 | 4.4:-14861546 | MS.gene08974:CDS |
| GATGTTCTTTGCAGGAAACA+AGG | 0.566091 | 4.4:-14859324 | MS.gene08974:intron |
| TGAGGACCACCTTGAAGGGA+AGG | 0.566539 | 4.4:+14859619 | None:intergenic |
| CAAGGGCTTGGTGGACAACA+AGG | 0.566901 | 4.4:-14858738 | MS.gene08974:CDS |
| AACCAAGCCTCTAGAAGTCA+TGG | 0.567694 | 4.4:+14858859 | None:intergenic |
| GGTCCTCACAATCACCAGAT+TGG | 0.567733 | 4.4:-14859604 | MS.gene08974:CDS |
| GATTGTGAGGACCACCTTGA+AGG | 0.568372 | 4.4:+14859614 | None:intergenic |
| GAGAGCTTCGATGACGGCGA+AGG | 0.570081 | 4.4:+14861414 | None:intergenic |
| ATCTCAGATACCAGGAAACC+AGG | 0.570656 | 4.4:+14858662 | None:intergenic |
| ACGTTAACTCCCCAAGATTG+TGG | 0.570906 | 4.4:+14861265 | None:intergenic |
| CATGGTTACTATACTTCTGG+TGG | 0.572834 | 4.4:-14861136 | MS.gene08974:CDS |
| TTCTGGTGGGAAGAAGATCT+CGG | 0.577762 | 4.4:-14861122 | MS.gene08974:CDS |
| TCGTACTCCTCCTGGAGCCA+AGG | 0.577883 | 4.4:+14859235 | None:intergenic |
| GCTCATCAAGTAATTTCCAA+TGG | 0.578871 | 4.4:+14859501 | None:intergenic |
| GGAGCATGGAAAACTTCTGA+AGG | 0.579867 | 4.4:-14858768 | MS.gene08974:CDS |
| GTGTAAGCAGCGAAATTCGC+CGG | 0.580461 | 4.4:+14861223 | None:intergenic |
| CTAGAGATCCAGAAGGAGCA+TGG | 0.581707 | 4.4:-14858782 | MS.gene08974:CDS |
| CTGAGAACCATCTTGTGTTG+TGG | 0.583570 | 4.4:-14859450 | MS.gene08974:CDS |
| GGATTGGATCTTCCTTCAGG+TGG | 0.584238 | 4.4:-14861169 | MS.gene08974:CDS |
| ACTTCTGAAGGATTTCAACA+AGG | 0.584978 | 4.4:-14858756 | MS.gene08974:CDS |
| AAGGGATACAGTCTTGTCAC+TGG | 0.587154 | 4.4:-14859478 | MS.gene08974:CDS |
| TTCGCCGTCATCGAAGCTCT+CGG | 0.587338 | 4.4:-14861412 | MS.gene08974:CDS |
| TGGAATGATCTTCTACAGGA+AGG | 0.588696 | 4.4:-14859719 | MS.gene08974:CDS |
| TGAGTGTCACAGCACGGTGA+AGG | 0.589218 | 4.4:+14858807 | None:intergenic |
| ATGCCGGGAAACCGTTACTA+CGG | 0.595584 | 4.4:-14861358 | MS.gene08974:CDS |
| GCTGCCGAGAGCTTCGATGA+CGG | 0.601481 | 4.4:+14861408 | None:intergenic |
| GAAGATCCCACAACACAAGA+TGG | 0.603113 | 4.4:+14859443 | None:intergenic |
| CTGTTTCAAGGCAACAGCAA+GGG | 0.603551 | 4.4:+14859579 | None:intergenic |
| CCTAGGTTGATTATCTGTGG+TGG | 0.604842 | 4.4:-14861001 | MS.gene08974:CDS |
| AGTTCTGTTAACAGGTGCTC+CGG | 0.607108 | 4.4:-14858882 | MS.gene08974:intron |
| TATAAGGTGAATTCGACGAC+TGG | 0.610662 | 4.4:-14861070 | MS.gene08974:CDS |
| GGAATGATCTTCTACAGGAA+GGG | 0.611076 | 4.4:-14859718 | MS.gene08974:CDS |
| GGATACAGTCTTGTCACTGG+TGG | 0.612060 | 4.4:-14859475 | MS.gene08974:CDS |
| TGAGTCAAATGTCCACCTGA+AGG | 0.612892 | 4.4:+14861157 | None:intergenic |
| GGACCTAAACCACCCAAGAA+GGG | 0.613785 | 4.4:-14859697 | MS.gene08974:CDS |
| GCTCCGGCCATGACTTCTAG+AGG | 0.616605 | 4.4:-14858866 | MS.gene08974:CDS |
| CCGTGCTTAATCCTCATGAT+CGG | 0.621696 | 4.4:-14861198 | MS.gene08974:CDS |
| TGTACTTCATCTCAGATACC+AGG | 0.622326 | 4.4:+14858654 | None:intergenic |
| GTTTATAATCCCAATCCCTA+GGG | 0.625521 | 4.4:+14860969 | None:intergenic |
| AGGGATGTTGCTGATAAGTG+TGG | 0.626741 | 4.4:-14860941 | MS.gene08974:CDS |
| TGAAACAGGCCATGTCACCT+GGG | 0.627178 | 4.4:-14859564 | MS.gene08974:CDS |
| GCACCAATCTGGTGATTGTG+AGG | 0.629254 | 4.4:+14859601 | None:intergenic |
| AAGCCTCTAGAAGTCATGGC+CGG | 0.629761 | 4.4:+14858863 | None:intergenic |
| CCTGTTTCAAGGCAACAGCA+AGG | 0.630010 | 4.4:+14859578 | None:intergenic |
| TTTATACCTGAGCAGCAACA+AGG | 0.632475 | 4.4:+14860882 | None:intergenic |
| CGGAATCGAACTCATCGCAT+CGG | 0.632638 | 4.4:-14861449 | MS.gene08974:CDS |
| GGTATCTGAGATGAAGTACA+AGG | 0.632761 | 4.4:-14858651 | MS.gene08974:CDS |
| GCTCCAGGAGGAGTACGAGT+TGG | 0.634787 | 4.4:-14859230 | MS.gene08974:intron |
| TCAGCCTTACTCTGGTTCAC+CGG | 0.636199 | 4.4:-14861242 | MS.gene08974:CDS |
| CCACCACAGATAATCAACCT+AGG | 0.638606 | 4.4:+14861001 | None:intergenic |
| CTTTACCAGTCAATCCAAGA+GGG | 0.641081 | 4.4:+14859419 | None:intergenic |
| ATGGATCCCGTTAACGAATG+GGG | 0.646563 | 4.4:-14861544 | MS.gene08974:CDS |
| AATCCCATAATCCGATCATG+AGG | 0.648526 | 4.4:+14861187 | None:intergenic |
| ATGGTTACTATACTTCTGGT+GGG | 0.651704 | 4.4:-14861135 | MS.gene08974:CDS |
| TCTGGGTCGACGGTTACGAG+TGG | 0.653406 | 4.4:+14861514 | None:intergenic |
| TTAACCAACAAATACTCCGA+AGG | 0.658341 | 4.4:-14861382 | MS.gene08974:CDS |
| ATGCGATGAGTTCGATTCCG+CGG | 0.660307 | 4.4:+14861452 | None:intergenic |
| GAGGACCACCTTGAAGGGAA+GGG | 0.667267 | 4.4:+14859620 | None:intergenic |
| TGTTGACTGTGATGTTACAG+AGG | 0.668976 | 4.4:+14859285 | None:intergenic |
| CCGGGAAACCGTTACTACGG+TGG | 0.675395 | 4.4:-14861355 | MS.gene08974:CDS |
| ACAACTCACAAGAGTTTGAG+GGG | 0.676117 | 4.4:-14859751 | MS.gene08974:CDS |
| CCGATCATGAGGATTAAGCA+CGG | 0.689739 | 4.4:+14861198 | None:intergenic |
| GTTCTTTGCAGGAAACAAGG+TGG | 0.691862 | 4.4:-14859321 | MS.gene08974:intron |
| AGCAGTGCCTTGGCTCCAGG+AGG | 0.693630 | 4.4:-14859242 | MS.gene08974:CDS |
| CCTTTACCAGTCAATCCAAG+AGG | 0.696201 | 4.4:+14859418 | None:intergenic |
| CTAGTGTGAGTGTCACAGCA+CGG | 0.697489 | 4.4:+14858801 | None:intergenic |
| ACTCACACTAGAGATCCAGA+AGG | 0.729137 | 4.4:-14858789 | MS.gene08974:CDS |
| ATCATGAGGATTAAGCACGG+CGG | 0.835014 | 4.4:+14861201 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAGATCCATTAAATTA+AGG | + | chr4.4:14859547-14859566 | None:intergenic | 15.0% |
| !! | AAGAACATCAATAATATTTA+GGG | - | chr4.4:14859979-14859998 | MS.gene08974:intron | 15.0% |
| !! | AATAAGATCCATTAAATTAA+GGG | + | chr4.4:14859546-14859565 | None:intergenic | 15.0% |
| !! | TAAATATTATTGATGTTCTT+GGG | + | chr4.4:14859979-14859998 | None:intergenic | 15.0% |
| !! | TATGAATCTAATTAACATAA+CGG | + | chr4.4:14859364-14859383 | None:intergenic | 15.0% |
| !! | TTGAGTAAAATATAAAACAA+AGG | + | chr4.4:14861275-14861294 | None:intergenic | 15.0% |
| !!! | TTTGTTTTATATTTTACTCA+AGG | - | chr4.4:14861274-14861293 | MS.gene08974:CDS | 15.0% |
| !!! | TTTTTTTTTTTTTTTTGTGG+TGG | - | chr4.4:14859825-14859844 | MS.gene08974:intron | 15.0% |
| !! | ACAAATCAAATAATACTACT+TGG | + | chr4.4:14861130-14861149 | None:intergenic | 20.0% |
| !! | CAAGAACATCAATAATATTT+AGG | - | chr4.4:14859978-14859997 | MS.gene08974:intron | 20.0% |
| !! | CTAAATATTATTGATGTTCT+TGG | + | chr4.4:14859980-14859999 | None:intergenic | 20.0% |
| !! | TAATGTAAGGATTTATTAGA+AGG | - | chr4.4:14860270-14860289 | MS.gene08974:intron | 20.0% |
| !! | TATACAGTAACAAGATTAAA+AGG | + | chr4.4:14861225-14861244 | None:intergenic | 20.0% |
| !!! | ATAATATGACTTGTTTTGTT+TGG | - | chr4.4:14860333-14860352 | MS.gene08974:intron | 20.0% |
| !!! | GCATATTTACAATTTTTACA+TGG | + | chr4.4:14861162-14861181 | None:intergenic | 20.0% |
| !!! | TATGGACTTAACTTTATTTT+CGG | - | chr4.4:14860995-14861014 | MS.gene08974:CDS | 20.0% |
| !!! | TTTTATTGATTATGATAGGT+TGG | - | chr4.4:14859143-14859162 | MS.gene08974:intron | 20.0% |
| ! | AATAAATCCTTACATTACCA+AGG | + | chr4.4:14860267-14860286 | None:intergenic | 25.0% |
| ! | ATTAAATTAAGGGAAATGTC+GGG | + | chr4.4:14859536-14859555 | None:intergenic | 25.0% |
| ! | CATTAAATTAAGGGAAATGT+CGG | + | chr4.4:14859537-14859556 | None:intergenic | 25.0% |
| ! | TACTCCTTATAGTTATACTA+TGG | + | chr4.4:14860207-14860226 | None:intergenic | 25.0% |
| ! | TATTATTCATAAGCTTGTCA+AGG | + | chr4.4:14860118-14860137 | None:intergenic | 25.0% |
| ! | TTTATATTGCGTACTATTTC+TGG | - | chr4.4:14860824-14860843 | MS.gene08974:intron | 25.0% |
| !! | ATCGATAAACTTGTCTTTTA+AGG | - | chr4.4:14859789-14859808 | MS.gene08974:CDS | 25.0% |
| !! | CAAGTTGTTGTAAATTTTGT+TGG | - | chr4.4:14861048-14861067 | MS.gene08974:CDS | 25.0% |
| !!! | CTGGTTTTATTGATTATGAT+AGG | - | chr4.4:14859139-14859158 | MS.gene08974:intron | 25.0% |
| AAAAATAAGCCAATCCAAAC+GGG | + | chr4.4:14860005-14860024 | None:intergenic | 30.0% | |
| AAAAATTAGCCAATCCAAAC+GGG | - | chr4.4:14860181-14860200 | MS.gene08974:intron | 30.0% | |
| AATAGTACGCAATATAAACC+AGG | + | chr4.4:14860822-14860841 | None:intergenic | 30.0% | |
| ATTGGGATTATAAACGGTTT+AGG | - | chr4.4:14859229-14859248 | MS.gene08974:intron | 30.0% | |
| CAAAAATAAGCCAATCCAAA+CGG | + | chr4.4:14860006-14860025 | None:intergenic | 30.0% | |
| CAAAAATTAGCCAATCCAAA+CGG | - | chr4.4:14860180-14860199 | MS.gene08974:intron | 30.0% | |
| CGACATTTCCCTTAATTTAA+TGG | - | chr4.4:14859535-14859554 | MS.gene08974:CDS | 30.0% | |
| CTACTTGGTAAAGAAATGAA+AGG | + | chr4.4:14861115-14861134 | None:intergenic | 30.0% | |
| CTATGATAAACATTGATGCT+AGG | - | chr4.4:14859941-14859960 | MS.gene08974:intron | 30.0% | |
| GTTGGAAATCAATTTGATTG+AGG | - | chr4.4:14861066-14861085 | MS.gene08974:CDS | 30.0% | |
| TAAGTTCTCACTAACGAAAA+TGG | - | chr4.4:14860062-14860081 | MS.gene08974:intron | 30.0% | |
| TTAAATTAAGGGAAATGTCG+GGG | + | chr4.4:14859535-14859554 | None:intergenic | 30.0% | |
| TTCACTGTAAACAAACTATG+AGG | + | chr4.4:14859665-14859684 | None:intergenic | 30.0% | |
| TTGGGATTATAAACGGTTTA+GGG | - | chr4.4:14859230-14859249 | MS.gene08974:intron | 30.0% | |
| TTTATCATAGCCCAGTTTAT+AGG | + | chr4.4:14859931-14859950 | None:intergenic | 30.0% | |
| ! | AACCAGGCAAGATAAATTTT+AGG | + | chr4.4:14860806-14860825 | None:intergenic | 30.0% |
| ! | TATTGATTATGATAGGTTGG+AGG | - | chr4.4:14859146-14859165 | MS.gene08974:intron | 30.0% |
| ! | TATTTTCGGAGTCTAAACTT+GGG | - | chr4.4:14861009-14861028 | MS.gene08974:CDS | 30.0% |
| ! | TTATTGATGTTCTTGGGTTT+TGG | + | chr4.4:14859973-14859992 | None:intergenic | 30.0% |
| ! | TTATTTTCGGAGTCTAAACT+TGG | - | chr4.4:14861008-14861027 | MS.gene08974:CDS | 30.0% |
| ! | TTGTCTCAAAGCTTTTCTTA+CGG | - | chr4.4:14860307-14860326 | MS.gene08974:intron | 30.0% |
| ! | TTGTTGTTATCTATTCCATC+TGG | - | chr4.4:14859719-14859738 | MS.gene08974:CDS | 30.0% |
| !! | AGTTGGTAAGAAACTTTGTA+TGG | - | chr4.4:14860977-14860996 | MS.gene08974:CDS | 30.0% |
| !! | TAGTTATTTGTTGTGTGTAC+AGG | - | chr4.4:14860375-14860394 | MS.gene08974:intron | 30.0% |
| !!! | GACGTTTTTCTTTTTCGATT+AGG | + | chr4.4:14858711-14858730 | None:intergenic | 30.0% |
| !!! | GTCAACAAAAATGCTGTTTT+TGG | - | chr4.4:14860921-14860940 | MS.gene08974:CDS | 30.0% |
| !!! | TTGATTATTTTTAGCCACCT+TGG | - | chr4.4:14860247-14860266 | MS.gene08974:intron | 30.0% |
| !!! | TTTTTTTTTTTTGTGGTGGC+CGG | - | chr4.4:14859829-14859848 | MS.gene08974:intron | 30.0% |
| AAATCCTTACATTACCAAGG+TGG | + | chr4.4:14860264-14860283 | None:intergenic | 35.0% | |
| AAATCGTAAACTGCATTCTC+AGG | + | chr4.4:14860523-14860542 | None:intergenic | 35.0% | |
| AACAACTCACAAGAGTTTGA+GGG | - | chr4.4:14860438-14860457 | MS.gene08974:intron | 35.0% | |
| AATCCTCATGATCGGATTAT+GGG | - | chr4.4:14859000-14859019 | MS.gene08974:intron | 35.0% | |
| ACAATGCCTTACCTATAAAC+TGG | - | chr4.4:14859917-14859936 | MS.gene08974:intron | 35.0% | |
| ACAATGTCACAGTACTCAAA+GGG | + | chr4.4:14860412-14860431 | None:intergenic | 35.0% | |
| ACTCATGGTTACTATACTTC+TGG | - | chr4.4:14859051-14859070 | MS.gene08974:intron | 35.0% | |
| ATAAAGCCCATTCATTTGTC+TGG | + | chr4.4:14859865-14859884 | None:intergenic | 35.0% | |
| ATGGTTACTATACTTCTGGT+GGG | - | chr4.4:14859055-14859074 | MS.gene08974:intron | 35.0% | |
| CAATGCCTTACCTATAAACT+GGG | - | chr4.4:14859918-14859937 | MS.gene08974:intron | 35.0% | |
| CACCTAAAATTTATCTTGCC+TGG | - | chr4.4:14860801-14860820 | MS.gene08974:intron | 35.0% | |
| CTAGGGATTGGGATTATAAA+CGG | - | chr4.4:14859223-14859242 | MS.gene08974:intron | 35.0% | |
| GAGAAGTTCTCTTCTTCATT+TGG | - | chr4.4:14861501-14861520 | MS.gene08974:CDS | 35.0% | |
| GCTCATCAAGTAATTTCCAA+TGG | + | chr4.4:14860692-14860711 | None:intergenic | 35.0% | |
| GGAAATTACTTGATGAGCAA+GGG | - | chr4.4:14860694-14860713 | MS.gene08974:intron | 35.0% | |
| GTTTATAATCCCAATCCCTA+GGG | + | chr4.4:14859224-14859243 | None:intergenic | 35.0% | |
| TAAAGCCCATTCATTTGTCT+GGG | + | chr4.4:14859864-14859883 | None:intergenic | 35.0% | |
| TAAATTAAGGGAAATGTCGG+GGG | + | chr4.4:14859534-14859553 | None:intergenic | 35.0% | |
| TAATCCTCATGATCGGATTA+TGG | - | chr4.4:14858999-14859018 | MS.gene08974:intron | 35.0% | |
| TCATATCGATCCACAATCTT+GGG | - | chr4.4:14858915-14858934 | MS.gene08974:intron | 35.0% | |
| TCTTGTTCCGTTGAATTAGA+GGG | - | chr4.4:14859625-14859644 | MS.gene08974:CDS | 35.0% | |
| TGGAAATTACTTGATGAGCA+AGG | - | chr4.4:14860693-14860712 | MS.gene08974:intron | 35.0% | |
| TTAACCAACAAATACTCCGA+AGG | - | chr4.4:14858808-14858827 | MS.gene08974:CDS | 35.0% | |
| TTCATATCGATCCACAATCT+TGG | - | chr4.4:14858914-14858933 | MS.gene08974:intron | 35.0% | |
| TTCTTGTTCCGTTGAATTAG+AGG | - | chr4.4:14859624-14859643 | MS.gene08974:CDS | 35.0% | |
| TTTGTTACCCCATTCGTTAA+CGG | + | chr4.4:14858656-14858675 | None:intergenic | 35.0% | |
| ! | AACGGCAAAGATTTTCGATT+TGG | + | chr4.4:14858876-14858895 | None:intergenic | 35.0% |
| ! | AATAATATTTAGGGCCCGTT+TGG | - | chr4.4:14859988-14860007 | MS.gene08974:intron | 35.0% |
| ! | ACTTCTGAAGGATTTCAACA+AGG | - | chr4.4:14861434-14861453 | MS.gene08974:CDS | 35.0% |
| ! | CTTCTGAAGGATTTCAACAA+GGG | - | chr4.4:14861435-14861454 | MS.gene08974:CDS | 35.0% |
| ! | GAAAAGGACTTTGAGAAGAT+TGG | - | chr4.4:14861354-14861373 | MS.gene08974:CDS | 35.0% |
| ! | GAATGCAGTTTACGATTTTG+AGG | - | chr4.4:14860525-14860544 | MS.gene08974:intron | 35.0% |
| ! | TGCTCTTTTGCTTTGTGATA+TGG | - | chr4.4:14859272-14859291 | MS.gene08974:CDS | 35.0% |
| ! | TGTGATATGGCTCATTTTAG+TGG | - | chr4.4:14859285-14859304 | MS.gene08974:CDS | 35.0% |
| ! | TTTCTGGAAACTTAATCTCG+CGG | - | chr4.4:14860840-14860859 | MS.gene08974:intron | 35.0% |
| !! | GGCAAGATAAATTTTAGGTG+AGG | + | chr4.4:14860801-14860820 | None:intergenic | 35.0% |
| !!! | TTTCTTTTTCGATTAGGTCG+TGG | + | chr4.4:14858705-14858724 | None:intergenic | 35.0% |
| !!! | TTTTTTTTTTTGTGGTGGCC+GGG | - | chr4.4:14859830-14859849 | MS.gene08974:intron | 35.0% |
| AAAGCCCATTCATTTGTCTG+GGG | + | chr4.4:14859863-14859882 | None:intergenic | 40.0% | |
| AATCCCATAATCCGATCATG+AGG | + | chr4.4:14859006-14859025 | None:intergenic | 40.0% | |
| ACAACTCACAAGAGTTTGAG+GGG | - | chr4.4:14860439-14860458 | MS.gene08974:intron | 40.0% | |
| ATTCGTTACCACCGTAGTAA+CGG | + | chr4.4:14858846-14858865 | None:intergenic | 40.0% | |
| ATTTCCAATGGCAACTGCAT+TGG | + | chr4.4:14860680-14860699 | None:intergenic | 40.0% | |
| CAACAACTCACAAGAGTTTG+AGG | - | chr4.4:14860437-14860456 | MS.gene08974:intron | 40.0% | |
| CACAATGTCACAGTACTCAA+AGG | + | chr4.4:14860413-14860432 | None:intergenic | 40.0% | |
| CATACTCCCCTCTAATTCAA+CGG | + | chr4.4:14859635-14859654 | None:intergenic | 40.0% | |
| CATAGCCCAGTTTATAGGTA+AGG | + | chr4.4:14859926-14859945 | None:intergenic | 40.0% | |
| CATATCGATCCACAATCTTG+GGG | - | chr4.4:14858916-14858935 | MS.gene08974:intron | 40.0% | |
| CATGGTTACTATACTTCTGG+TGG | - | chr4.4:14859054-14859073 | MS.gene08974:intron | 40.0% | |
| CCATCTGGATCTGTTGTTAA+AGG | - | chr4.4:14859734-14859753 | MS.gene08974:CDS | 40.0% | |
| CCTTTAACAACAGATCCAGA+TGG | + | chr4.4:14859737-14859756 | None:intergenic | 40.0% | |
| CGGGCCATAGTATAACTATA+AGG | - | chr4.4:14860200-14860219 | MS.gene08974:intron | 40.0% | |
| CGTTTATAATCCCAATCCCT+AGG | + | chr4.4:14859225-14859244 | None:intergenic | 40.0% | |
| CTTGTTCCGTTGAATTAGAG+GGG | - | chr4.4:14859626-14859645 | MS.gene08974:CDS | 40.0% | |
| CTTTACCAGTCAATCCAAGA+GGG | + | chr4.4:14860774-14860793 | None:intergenic | 40.0% | |
| GATGTTCTTTGCAGGAAACA+AGG | - | chr4.4:14860866-14860885 | MS.gene08974:intron | 40.0% | |
| GGAATGATCTTCTACAGGAA+GGG | - | chr4.4:14860472-14860491 | MS.gene08974:intron | 40.0% | |
| GTCGTCGAATTCACCTTATA+CGG | + | chr4.4:14859120-14859139 | None:intergenic | 40.0% | |
| TAGTTATACTATGGCCCGTT+TGG | + | chr4.4:14860198-14860217 | None:intergenic | 40.0% | |
| TATAAGGTGAATTCGACGAC+TGG | - | chr4.4:14859120-14859139 | MS.gene08974:intron | 40.0% | |
| TCATGATCGGATTATGGGAT+TGG | - | chr4.4:14859005-14859024 | MS.gene08974:intron | 40.0% | |
| TCTTCTTCATTTGGTATGCC+TGG | - | chr4.4:14861510-14861529 | MS.gene08974:CDS | 40.0% | |
| TGAGAACCATCTTGTGTTGT+GGG | - | chr4.4:14860741-14860760 | MS.gene08974:intron | 40.0% | |
| TGGAATGATCTTCTACAGGA+AGG | - | chr4.4:14860471-14860490 | MS.gene08974:intron | 40.0% | |
| TGTACTTCATCTCAGATACC+AGG | + | chr4.4:14861539-14861558 | None:intergenic | 40.0% | |
| TTGTTACCCCATTCGTTAAC+GGG | + | chr4.4:14858655-14858674 | None:intergenic | 40.0% | |
| TTTATACCTGAGCAGCAACA+AGG | + | chr4.4:14859311-14859330 | None:intergenic | 40.0% | |
| ! | CTTTGAGAGTTTGCCGTATA+AGG | - | chr4.4:14859104-14859123 | MS.gene08974:intron | 40.0% |
| ! | GGTATCTGAGATGAAGTACA+AGG | - | chr4.4:14861539-14861558 | MS.gene08974:CDS | 40.0% |
| ! | TGTTGACTGTGATGTTACAG+AGG | + | chr4.4:14860908-14860927 | None:intergenic | 40.0% |
| ! | TTCTAGAGGCTTGGTTGAAA+AGG | - | chr4.4:14861338-14861357 | MS.gene08974:CDS | 40.0% |
| ! | TTTTACTCAAGGTAGCTGAC+TGG | - | chr4.4:14861285-14861304 | MS.gene08974:CDS | 40.0% |
| !! | TTAGCCACCTTGGTAATGTA+AGG | - | chr4.4:14860257-14860276 | MS.gene08974:intron | 40.0% |
| !!! | AGGAGAAAGCGTTGGATTTT+AGG | - | chr4.4:14859166-14859185 | MS.gene08974:intron | 40.0% |
| !!! | TTTTTTTTTTGTGGTGGCCG+GGG | - | chr4.4:14859831-14859850 | MS.gene08974:intron | 40.0% |
| ACGTTAACTCCCCAAGATTG+TGG | + | chr4.4:14858928-14858947 | None:intergenic | 45.0% | |
| ACTCACACTAGAGATCCAGA+AGG | - | chr4.4:14861401-14861420 | MS.gene08974:CDS | 45.0% | |
| AGGGATGTTGCTGATAAGTG+TGG | - | chr4.4:14859249-14859268 | MS.gene08974:CDS | 45.0% | |
| AGTTCTGTTAACAGGTGCTC+CGG | - | chr4.4:14861308-14861327 | MS.gene08974:CDS | 45.0% | |
| ATACTATGGCCCGTTTGGAT+TGG | + | chr4.4:14860193-14860212 | None:intergenic | 45.0% | |
| ATCATGAGGATTAAGCACGG+CGG | + | chr4.4:14858992-14859011 | None:intergenic | 45.0% | |
| ATCTCAGATACCAGGAAACC+AGG | + | chr4.4:14861531-14861550 | None:intergenic | 45.0% | |
| ATGGATCCCGTTAACGAATG+GGG | - | chr4.4:14858646-14858665 | MS.gene08974:CDS | 45.0% | |
| ATGGGATTGGATCTTCCTTC+AGG | - | chr4.4:14859018-14859037 | MS.gene08974:intron | 45.0% | |
| ATTGTGAGGACCACCTTGAA+GGG | + | chr4.4:14860578-14860597 | None:intergenic | 45.0% | |
| ATTTGGTATGCCTGGTTTCC+TGG | - | chr4.4:14861518-14861537 | MS.gene08974:CDS | 45.0% | |
| CCACCACAGATAATCAACCT+AGG | + | chr4.4:14859192-14859211 | None:intergenic | 45.0% | |
| CCGATCATGAGGATTAAGCA+CGG | + | chr4.4:14858995-14859014 | None:intergenic | 45.0% | |
| CCGTGCTTAATCCTCATGAT+CGG | - | chr4.4:14858992-14859011 | MS.gene08974:intron | 45.0% | |
| CCTCTTGGATTGACTGGTAA+AGG | - | chr4.4:14860772-14860791 | MS.gene08974:intron | 45.0% | |
| CCTTTACCAGTCAATCCAAG+AGG | + | chr4.4:14860775-14860794 | None:intergenic | 45.0% | |
| CGAACCCCAGACAAATGAAT+GGG | - | chr4.4:14859856-14859875 | MS.gene08974:intron | 45.0% | |
| CTGACTGGAGTTCTGTTAAC+AGG | - | chr4.4:14861300-14861319 | MS.gene08974:CDS | 45.0% | |
| CTGAGAACCATCTTGTGTTG+TGG | - | chr4.4:14860740-14860759 | MS.gene08974:intron | 45.0% | |
| CTGTTTCAAGGCAACAGCAA+GGG | + | chr4.4:14860614-14860633 | None:intergenic | 45.0% | |
| GAAGATCCCACAACACAAGA+TGG | + | chr4.4:14860750-14860769 | None:intergenic | 45.0% | |
| GAAGGATTTCAACAAGGGCT+TGG | - | chr4.4:14861440-14861459 | MS.gene08974:CDS | 45.0% | |
| GGAGCATGGAAAACTTCTGA+AGG | - | chr4.4:14861422-14861441 | MS.gene08974:CDS | 45.0% | |
| GGCATATGCCAAGCAAGTTA+AGG | - | chr4.4:14860654-14860673 | MS.gene08974:intron | 45.0% | |
| GTTAACGTTCAGCCTTACTC+TGG | - | chr4.4:14858940-14858959 | MS.gene08974:intron | 45.0% | |
| GTTCTTTGCAGGAAACAAGG+TGG | - | chr4.4:14860869-14860888 | MS.gene08974:intron | 45.0% | |
| TAGAAGATCATTCCAGCCCT+AGG | + | chr4.4:14860466-14860485 | None:intergenic | 45.0% | |
| TAGTGCTTACCCTAGGGATT+GGG | - | chr4.4:14859212-14859231 | MS.gene08974:intron | 45.0% | |
| TCAGGTGGACATTTGACTCA+TGG | - | chr4.4:14859036-14859055 | MS.gene08974:intron | 45.0% | |
| TCGAACCCCAGACAAATGAA+TGG | - | chr4.4:14859855-14859874 | MS.gene08974:intron | 45.0% | |
| TGAGTCAAATGTCCACCTGA+AGG | + | chr4.4:14859036-14859055 | None:intergenic | 45.0% | |
| TTCTGGTGGGAAGAAGATCT+CGG | - | chr4.4:14859068-14859087 | MS.gene08974:intron | 45.0% | |
| ! | AACCAAGCCTCTAGAAGTCA+TGG | + | chr4.4:14861334-14861353 | None:intergenic | 45.0% |
| ! | AAGGGATACAGTCTTGTCAC+TGG | - | chr4.4:14860712-14860731 | MS.gene08974:intron | 45.0% |
| ! | CATGCCTTCGGAGTATTTGT+TGG | + | chr4.4:14858815-14858834 | None:intergenic | 45.0% |
| ! | GAAGTTTTCCATGCTCCTTC+TGG | + | chr4.4:14861419-14861438 | None:intergenic | 45.0% |
| ! | GGCTTTATAAGCTCCCATCA+TGG | - | chr4.4:14859877-14859896 | MS.gene08974:intron | 45.0% |
| ! | TATTTAGGGCCCGTTTGGAT+TGG | - | chr4.4:14859993-14860012 | MS.gene08974:intron | 45.0% |
| !! | AGGCCTAGGTTGATTATCTG+TGG | - | chr4.4:14859186-14859205 | MS.gene08974:intron | 45.0% |
| !! | CCTAGGTTGATTATCTGTGG+TGG | - | chr4.4:14859189-14859208 | MS.gene08974:intron | 45.0% |
| !! | TGCATTGGCCTTAACTTGCT+TGG | + | chr4.4:14860665-14860684 | None:intergenic | 45.0% |
| !!! | AAGCGTTGGATTTTAGGCCT+AGG | - | chr4.4:14859172-14859191 | MS.gene08974:intron | 45.0% |
| !!! | TTTTTTTTTTTTTTTTTTTG+TGG | - | chr4.4:14859822-14859841 | MS.gene08974:intron | 5.0% |
| AAGGCCAATGCAGTTGCCAT+TGG | - | chr4.4:14860673-14860692 | MS.gene08974:intron | 50.0% | |
| ACAAGAGTTTGAGGGGTCCT+AGG | - | chr4.4:14860446-14860465 | MS.gene08974:intron | 50.0% | |
| ACCCACACATTGAGCCATGA+TGG | + | chr4.4:14859894-14859913 | None:intergenic | 50.0% | |
| AGGTGACATGGCCTGTTTCA+AGG | + | chr4.4:14860626-14860645 | None:intergenic | 50.0% | |
| ATGCCGGGAAACCGTTACTA+CGG | - | chr4.4:14858832-14858851 | MS.gene08974:CDS | 50.0% | |
| ATGCGATGAGTTCGATTCCG+CGG | + | chr4.4:14858741-14858760 | None:intergenic | 50.0% | |
| CAAGAGTTTGAGGGGTCCTA+GGG | - | chr4.4:14860447-14860466 | MS.gene08974:intron | 50.0% | |
| CCCACACATTGAGCCATGAT+GGG | + | chr4.4:14859893-14859912 | None:intergenic | 50.0% | |
| CCCATCATGGCTCAATGTGT+GGG | - | chr4.4:14859890-14859909 | MS.gene08974:intron | 50.0% | |
| CCTGTTTCAAGGCAACAGCA+AGG | + | chr4.4:14860615-14860634 | None:intergenic | 50.0% | |
| CGATTAGGTCGTGGATCTCT+GGG | + | chr4.4:14858696-14858715 | None:intergenic | 50.0% | |
| CGCGGTTTGATGTTCTTTGC+AGG | - | chr4.4:14860858-14860877 | MS.gene08974:intron | 50.0% | |
| CGGAATCGAACTCATCGCAT+CGG | - | chr4.4:14858741-14858760 | MS.gene08974:CDS | 50.0% | |
| CGTAAACTGCATTCTCAGGC+TGG | + | chr4.4:14860519-14860538 | None:intergenic | 50.0% | |
| CTAGAGATCCAGAAGGAGCA+TGG | - | chr4.4:14861408-14861427 | MS.gene08974:CDS | 50.0% | |
| CTAGTGTGAGTGTCACAGCA+CGG | + | chr4.4:14861392-14861411 | None:intergenic | 50.0% | |
| GAAAAACGTCGTCAATGCCG+CGG | - | chr4.4:14858721-14858740 | MS.gene08974:CDS | 50.0% | |
| GATTGTGAGGACCACCTTGA+AGG | + | chr4.4:14860579-14860598 | None:intergenic | 50.0% | |
| GCACCAATCTGGTGATTGTG+AGG | + | chr4.4:14860592-14860611 | None:intergenic | 50.0% | |
| GGACCTAAACCACCCAAGAA+GGG | - | chr4.4:14860493-14860512 | MS.gene08974:intron | 50.0% | |
| GGATTGGATCTTCCTTCAGG+TGG | - | chr4.4:14859021-14859040 | MS.gene08974:intron | 50.0% | |
| GGATTTCAACAAGGGCTTGG+TGG | - | chr4.4:14861443-14861462 | MS.gene08974:CDS | 50.0% | |
| GGGCTGGAATGATCTTCTAC+AGG | - | chr4.4:14860467-14860486 | MS.gene08974:intron | 50.0% | |
| GGTCCTCACAATCACCAGAT+TGG | - | chr4.4:14860586-14860605 | MS.gene08974:intron | 50.0% | |
| GTAGTGCTTACCCTAGGGAT+TGG | - | chr4.4:14859211-14859230 | MS.gene08974:intron | 50.0% | |
| GTGTAAGCAGCGAAATTCGC+CGG | + | chr4.4:14858970-14858989 | None:intergenic | 50.0% | |
| TCCCATCATGGCTCAATGTG+TGG | - | chr4.4:14859889-14859908 | MS.gene08974:intron | 50.0% | |
| TCGATTAGGTCGTGGATCTC+TGG | + | chr4.4:14858697-14858716 | None:intergenic | 50.0% | |
| TGAAACAGGCCATGTCACCT+GGG | - | chr4.4:14860626-14860645 | MS.gene08974:intron | 50.0% | |
| TTACCAACTCGTACTCCTCC+TGG | + | chr4.4:14860966-14860985 | None:intergenic | 50.0% | |
| TTGAAACAGGCCATGTCACC+TGG | - | chr4.4:14860625-14860644 | MS.gene08974:intron | 50.0% | |
| TTGGCATATGCCTTGAACCC+AGG | + | chr4.4:14860646-14860665 | None:intergenic | 50.0% | |
| ! | AAATACTCCGAAGGCATGCC+GGG | - | chr4.4:14858817-14858836 | MS.gene08974:CDS | 50.0% |
| ! | AAGCCTCTAGAAGTCATGGC+CGG | + | chr4.4:14861330-14861349 | None:intergenic | 50.0% |
| ! | AAGCTTGAAGAGCGCGTGAA+CGG | + | chr4.4:14858894-14858913 | None:intergenic | 50.0% |
| ! | CAAATACTCCGAAGGCATGC+CGG | - | chr4.4:14858816-14858835 | MS.gene08974:CDS | 50.0% |
| ! | GCAGTTTTCCCTTCCCTTCA+AGG | - | chr4.4:14860562-14860581 | MS.gene08974:intron | 50.0% |
| ! | GGATACAGTCTTGTCACTGG+TGG | - | chr4.4:14860715-14860734 | MS.gene08974:intron | 50.0% |
| ! | GTTTTCCCTTCCCTTCAAGG+TGG | - | chr4.4:14860565-14860584 | MS.gene08974:intron | 50.0% |
| ! | TAGGTTGGAGGAGAAAGCGT+TGG | - | chr4.4:14859158-14859177 | MS.gene08974:intron | 50.0% |
| ! | TCAGCCTTACTCTGGTTCAC+CGG | - | chr4.4:14858948-14858967 | MS.gene08974:intron | 50.0% |
| ! | TGGTGGTAGTGCTTACCCTA+GGG | - | chr4.4:14859206-14859225 | MS.gene08974:intron | 50.0% |
| ! | TTTTGGCGATAGCAGTGCCT+TGG | - | chr4.4:14860938-14860957 | MS.gene08974:CDS | 50.0% |
| !! | CCTTGCTGTTGCCTTGAAAC+AGG | - | chr4.4:14860612-14860631 | MS.gene08974:intron | 50.0% |
| CCACCGTAGTAACGGTTTCC+CGG | + | chr4.4:14858838-14858857 | None:intergenic | 55.0% | |
| CTTCGCCCTCTTGGATTGAC+TGG | - | chr4.4:14860766-14860785 | MS.gene08974:intron | 55.0% | |
| GAGGACCACCTTGAAGGGAA+GGG | + | chr4.4:14860573-14860592 | None:intergenic | 55.0% | |
| GGGACCTAAACCACCCAAGA+AGG | - | chr4.4:14860492-14860511 | MS.gene08974:intron | 55.0% | |
| TGAGGACCACCTTGAAGGGA+AGG | + | chr4.4:14860574-14860593 | None:intergenic | 55.0% | |
| TGAGTGTCACAGCACGGTGA+AGG | + | chr4.4:14861386-14861405 | None:intergenic | 55.0% | |
| TGCCTTGAACCCAGGTGACA+TGG | + | chr4.4:14860638-14860657 | None:intergenic | 55.0% | |
| TGGCCCTTCTTGGGTGGTTT+AGG | + | chr4.4:14860499-14860518 | None:intergenic | 55.0% | |
| TTCGCCGGTGAACCAGAGTA+AGG | + | chr4.4:14858955-14858974 | None:intergenic | 55.0% | |
| TTCGCCGTCATCGAAGCTCT+CGG | - | chr4.4:14858778-14858797 | MS.gene08974:CDS | 55.0% | |
| TTGTGGGATCTTCGCCCTCT+TGG | - | chr4.4:14860757-14860776 | MS.gene08974:intron | 55.0% | |
| ! | ATTCTCAGGCTGGCCCTTCT+TGG | + | chr4.4:14860509-14860528 | None:intergenic | 55.0% |
| ! | GGCCATGACTTCTAGAGGCT+TGG | - | chr4.4:14861329-14861348 | MS.gene08974:CDS | 55.0% |
| ! | GTGGTGGTAGTGCTTACCCT+AGG | - | chr4.4:14859205-14859224 | MS.gene08974:intron | 55.0% |
| ! | TTCTCAGGCTGGCCCTTCTT+GGG | + | chr4.4:14860508-14860527 | None:intergenic | 55.0% |
| ! | TTTGTCTGGGGTTCGAACCC+CGG | + | chr4.4:14859851-14859870 | None:intergenic | 55.0% |
| !! | AATGTCGGGGGCACTGGTTA+AGG | + | chr4.4:14859522-14859541 | None:intergenic | 55.0% |
| !! | CAACAGCAAGGGCACCAATC+TGG | + | chr4.4:14860603-14860622 | None:intergenic | 55.0% |
| !! | CAAGGGCTTGGTGGACAACA+AGG | - | chr4.4:14861452-14861471 | MS.gene08974:CDS | 55.0% |
| !! | TAGTGGCCTTGTTGCTGCTC+AGG | - | chr4.4:14859302-14859321 | MS.gene08974:CDS | 55.0% |
| ACGGTTTCCCGGCATGCCTT+CGG | + | chr4.4:14858827-14858846 | None:intergenic | 60.0% | |
| AGTTTGAGGGGTCCTAGGGC+TGG | - | chr4.4:14860451-14860470 | MS.gene08974:intron | 60.0% | |
| CCGGGAAACCGTTACTACGG+TGG | - | chr4.4:14858835-14858854 | MS.gene08974:CDS | 60.0% | |
| GATAGCAGTGCCTTGGCTCC+AGG | - | chr4.4:14860945-14860964 | MS.gene08974:CDS | 60.0% | |
| GCTCCGGCCATGACTTCTAG+AGG | - | chr4.4:14861324-14861343 | MS.gene08974:CDS | 60.0% | |
| GCTGCCGAGAGCTTCGATGA+CGG | + | chr4.4:14858785-14858804 | None:intergenic | 60.0% | |
| GGCCATGTCACCTGGGTTCA+AGG | - | chr4.4:14860633-14860652 | MS.gene08974:intron | 60.0% | |
| GTCGTGGATCTCTGGGTCGA+CGG | + | chr4.4:14858689-14858708 | None:intergenic | 60.0% | |
| TCGTACTCCTCCTGGAGCCA+AGG | + | chr4.4:14860958-14860977 | None:intergenic | 60.0% | |
| TCTGGGTCGACGGTTACGAG+TGG | + | chr4.4:14858679-14858698 | None:intergenic | 60.0% | |
| ! | AAGGGAAATGTCGGGGGCAC+TGG | + | chr4.4:14859528-14859547 | None:intergenic | 60.0% |
| ! | GAGAGCTTCGATGACGGCGA+AGG | + | chr4.4:14858779-14858798 | None:intergenic | 60.0% |
| ! | GCTCCAGGAGGAGTACGAGT+TGG | - | chr4.4:14860960-14860979 | MS.gene08974:CDS | 60.0% |
| AGCAGTGCCTTGGCTCCAGG+AGG | - | chr4.4:14860948-14860967 | MS.gene08974:CDS | 65.0% | |
| ! | TCAGGCTGGCCCTTCTTGGG+TGG | + | chr4.4:14860505-14860524 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 14858646 | 14861566 | 14858646 | ID=MS.gene08974 |
| chr4.4 | mRNA | 14858646 | 14861566 | 14858646 | ID=MS.gene08974.t1;Parent=MS.gene08974 |
| chr4.4 | exon | 14860889 | 14861566 | 14860889 | ID=MS.gene08974.t1.exon1;Parent=MS.gene08974.t1 |
| chr4.4 | CDS | 14860889 | 14861566 | 14860889 | ID=cds.MS.gene08974.t1;Parent=MS.gene08974.t1 |
| chr4.4 | exon | 14859425 | 14859815 | 14859425 | ID=MS.gene08974.t1.exon2;Parent=MS.gene08974.t1 |
| chr4.4 | CDS | 14859425 | 14859815 | 14859425 | ID=cds.MS.gene08974.t1;Parent=MS.gene08974.t1 |
| chr4.4 | exon | 14859231 | 14859332 | 14859231 | ID=MS.gene08974.t1.exon3;Parent=MS.gene08974.t1 |
| chr4.4 | CDS | 14859231 | 14859332 | 14859231 | ID=cds.MS.gene08974.t1;Parent=MS.gene08974.t1 |
| chr4.4 | exon | 14858646 | 14858890 | 14858646 | ID=MS.gene08974.t1.exon4;Parent=MS.gene08974.t1 |
| chr4.4 | CDS | 14858646 | 14858890 | 14858646 | ID=cds.MS.gene08974.t1;Parent=MS.gene08974.t1 |
| Gene Sequence |
| Protein sequence |
