Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09025.t1 | ABN05850.1 | 93.8 | 64 | 4 | 0 | 63 | 126 | 63 | 126 | 9.50E-26 | 126.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09025.t1 | Q9ZPI1 | 49.3 | 69 | 35 | 0 | 67 | 135 | 85 | 153 | 6.0e-13 | 75.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09025.t1 | G7IMZ7 | 93.8 | 64 | 4 | 0 | 63 | 126 | 63 | 126 | 6.8e-26 | 126.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene09025 | 0.801221 | 9.97E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene09025 | 0.802653 | 5.07E-49 | -1.69E-46 |
| MS.gene052239 | MS.gene09025 | -0.815314 | 9.85E-52 | -1.69E-46 |
| MS.gene052447 | MS.gene09025 | 0.801913 | 7.19E-49 | -1.69E-46 |
| MS.gene053154 | MS.gene09025 | 0.81665 | 4.96E-52 | -1.69E-46 |
| MS.gene05415 | MS.gene09025 | 0.82694 | 2.06E-54 | -1.69E-46 |
| MS.gene058010 | MS.gene09025 | 0.822487 | 2.31E-53 | -1.69E-46 |
| MS.gene058979 | MS.gene09025 | 0.807496 | 4.91E-50 | -1.69E-46 |
| MS.gene059439 | MS.gene09025 | 0.813224 | 2.85E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09025.t1 | MTR_2g036600 | 87.302 | 126 | 16 | 0 | 1 | 126 | 1 | 126 | 8.55e-60 | 195 |
| MS.gene09025.t1 | MTR_4g127770 | 63.750 | 80 | 28 | 1 | 47 | 126 | 534 | 612 | 1.55e-26 | 104 |
| MS.gene09025.t1 | MTR_2g021780 | 40.909 | 66 | 39 | 0 | 55 | 120 | 29 | 94 | 5.85e-12 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09025.t1 | AT3G11710 | 50.467 | 107 | 53 | 0 | 20 | 126 | 38 | 144 | 5.87e-20 | 85.9 |
Find 48 sgRNAs with CRISPR-Local
Find 112 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATACAAAACCCTTACATTT+TGG | 0.160225 | 4.4:-15357542 | None:intergenic |
| CCGCGGCGGGATCGGTGGCC+GGG | 0.245174 | 4.4:-15355809 | None:intergenic |
| TCGAGACATTTAGGTATATT+AGG | 0.247416 | 4.4:+15357439 | MS.gene09025:intron |
| GCAGAGAATTTGTGTGGATA+TGG | 0.276532 | 4.4:-15357075 | None:intergenic |
| CCCGCGGCGGGATCGGTGGC+CGG | 0.291436 | 4.4:-15355810 | None:intergenic |
| CGCGGCGGGATCGGTGGCCG+GGG | 0.291611 | 4.4:-15355808 | None:intergenic |
| CATGCTTATGTTGCTCAGTA+TGG | 0.346734 | 4.4:+15357505 | MS.gene09025:CDS |
| CTGATGTTGGTAGTTATAGT+AGG | 0.373796 | 4.4:+15357479 | MS.gene09025:CDS |
| TGTTTAACTGCAGCAATACT+TGG | 0.390068 | 4.4:+15357005 | MS.gene09025:intron |
| CTGCATATGGCCAAAATGTA+AGG | 0.394148 | 4.4:+15357532 | MS.gene09025:CDS |
| AGTTTCGCCCGCGGCGGGAT+CGG | 0.407391 | 4.4:-15355817 | None:intergenic |
| TGCAGCAATACTTGGAGAAC+AGG | 0.411482 | 4.4:+15357013 | MS.gene09025:intron |
| GGATAAGAGAATTACCCTTC+TGG | 0.411564 | 4.4:-15356029 | None:intergenic |
| CTTATAGTTTCGCCCGCGGC+GGG | 0.429928 | 4.4:-15355822 | None:intergenic |
| AGCTGCTGATGAGGAAGATA+TGG | 0.435435 | 4.4:+15356887 | MS.gene09025:CDS |
| GCGGCGGGATCGGTGGCCGG+GGG | 0.437817 | 4.4:-15355807 | None:intergenic |
| CAGAGAATTTGTGTGGATAT+GGG | 0.448925 | 4.4:-15357074 | None:intergenic |
| GATGTTTCTGTATCTTTGAC+TGG | 0.451781 | 4.4:+15357162 | MS.gene09025:CDS |
| CCGGCCACCGATCCCGCCGC+GGG | 0.462818 | 4.4:+15355810 | MS.gene09025:CDS |
| TAAGTATCTTGCAACTGAAA+AGG | 0.466073 | 4.4:+15357038 | MS.gene09025:CDS |
| TCAGTATGGAGGTCTGCATA+TGG | 0.473519 | 4.4:+15357519 | MS.gene09025:CDS |
| AGGTATATTAGGTAGTTCTC+AGG | 0.485185 | 4.4:+15357450 | MS.gene09025:intron |
| CTTGCAACTGAAAAGGAAGA+AGG | 0.491377 | 4.4:+15357045 | MS.gene09025:CDS |
| AGTATAGAGGTTTAAGTGAT+GGG | 0.496348 | 4.4:+15357127 | MS.gene09025:CDS |
| GATATATTGTTTAATAGTCA+TGG | 0.500652 | 4.4:-15357100 | None:intergenic |
| ACAACCTCCTTCCGATCCCC+CGG | 0.502316 | 4.4:+15355791 | MS.gene09025:CDS |
| TCTTCCTCATCAGCAGCTGC+AGG | 0.513803 | 4.4:-15356882 | None:intergenic |
| CAGACCTGCAGCTGCTGATG+AGG | 0.516125 | 4.4:+15356878 | MS.gene09025:CDS |
| CCCGGCCACCGATCCCGCCG+CGG | 0.518109 | 4.4:+15355809 | MS.gene09025:CDS |
| CGGGCGAAACTATAAGCAAA+AGG | 0.518266 | 4.4:+15355829 | MS.gene09025:CDS |
| CAATATATCAAGGAGTATAG+AGG | 0.522228 | 4.4:+15357114 | MS.gene09025:CDS |
| GACTATTAAACAATATATCA+AGG | 0.525455 | 4.4:+15357104 | MS.gene09025:CDS |
| AGCTGCAGGTCTGTTCTCGT+TGG | 0.535724 | 4.4:-15356868 | None:intergenic |
| GAAGCGTGAGATCAAGAAAA+GGG | 0.536032 | 4.4:+15355967 | MS.gene09025:CDS |
| GGAAGAGGAAAGAGCCAGAA+GGG | 0.537336 | 4.4:+15356015 | MS.gene09025:CDS |
| GAGTATAGAGGTTTAAGTGA+TGG | 0.539469 | 4.4:+15357126 | MS.gene09025:CDS |
| TTCGCCCGCGGCGGGATCGG+TGG | 0.546748 | 4.4:-15355814 | None:intergenic |
| TTGCAACTGAAAAGGAAGAA+GGG | 0.547876 | 4.4:+15357046 | MS.gene09025:CDS |
| TGAAGCGTGAGATCAAGAAA+AGG | 0.551877 | 4.4:+15355966 | MS.gene09025:CDS |
| TGATGTTGGTAGTTATAGTA+GGG | 0.573304 | 4.4:+15357480 | MS.gene09025:CDS |
| GCTTATGTTGCTCAGTATGG+AGG | 0.574250 | 4.4:+15357508 | MS.gene09025:CDS |
| GCTTATAGTTTCGCCCGCGG+CGG | 0.581728 | 4.4:-15355823 | None:intergenic |
| TCTCAGGAAGATGCTGATGT+TGG | 0.590847 | 4.4:+15357466 | MS.gene09025:CDS |
| AGGAAGAGGAAAGAGCCAGA+AGG | 0.619352 | 4.4:+15356014 | MS.gene09025:CDS |
| TGCATATGGCCAAAATGTAA+GGG | 0.632254 | 4.4:+15357533 | MS.gene09025:CDS |
| TTTGCTTATAGTTTCGCCCG+CGG | 0.696976 | 4.4:-15355826 | None:intergenic |
| ATATTGTTTAATAGTCATGG+TGG | 0.712555 | 4.4:-15357097 | None:intergenic |
| ATGGTGGCAGAGAATTTGTG+TGG | 0.713727 | 4.4:-15357081 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATCAAAAAATAAATTTC+AGG | - | chr4.4:15356078-15356097 | None:intergenic | 10.0% |
| !! | TAAATTTAACCATTAATCAA+AGG | - | chr4.4:15356720-15356739 | None:intergenic | 15.0% |
| !!! | GTATTTAATTTTTGAAAATC+TGG | + | chr4.4:15356206-15356225 | MS.gene09025:intron | 15.0% |
| !!! | TATATCAAACATAAATTTTC+AGG | - | chr4.4:15356809-15356828 | None:intergenic | 15.0% |
| !! | GACTATTAAACAATATATCA+AGG | + | chr4.4:15357104-15357123 | MS.gene09025:CDS | 20.0% |
| !! | GATATATTGTTTAATAGTCA+TGG | - | chr4.4:15357103-15357122 | None:intergenic | 20.0% |
| !! | TAAAAAATCGTGAAATTCAA+CGG | - | chr4.4:15355908-15355927 | None:intergenic | 20.0% |
| !! | TATGTATCTAAACAATTGTT+AGG | + | chr4.4:15356325-15356344 | MS.gene09025:intron | 20.0% |
| !!! | TATAATGTCAATACTTTTCT+AGG | + | chr4.4:15356827-15356846 | MS.gene09025:intron | 20.0% |
| !!! | TTTTTCTTAATAGTTTCTCT+AGG | - | chr4.4:15356529-15356548 | None:intergenic | 20.0% |
| !!! | TTTTTTCTTTTCTTGACAAT+AGG | + | chr4.4:15356652-15356671 | MS.gene09025:intron | 20.0% |
| ! | AAATCTAGAGATTAATGAGT+TGG | + | chr4.4:15356546-15356565 | MS.gene09025:intron | 25.0% |
| ! | AAATTGAAGGTTACGATAAA+TGG | - | chr4.4:15356053-15356072 | None:intergenic | 25.0% |
| ! | ATACACTAACCTTTGATTAA+TGG | + | chr4.4:15356708-15356727 | MS.gene09025:intron | 25.0% |
| ! | ATATTGTTTAATAGTCATGG+TGG | - | chr4.4:15357100-15357119 | None:intergenic | 25.0% |
| ! | CTATAGAAGAAATAACATGT+TGG | - | chr4.4:15356952-15356971 | None:intergenic | 25.0% |
| ! | GAAGATTTGAAAATTCAGTA+AGG | + | chr4.4:15356458-15356477 | MS.gene09025:intron | 25.0% |
| ! | TAAATTTCAGGACAAATTGA+AGG | - | chr4.4:15356066-15356085 | None:intergenic | 25.0% |
| ! | TCAAATAACAAAATCACACA+GGG | - | chr4.4:15356253-15356272 | None:intergenic | 25.0% |
| ! | TTCAAATAACAAAATCACAC+AGG | - | chr4.4:15356254-15356273 | None:intergenic | 25.0% |
| !! | GAGATTGAAATTTTCTTCAT+TGG | - | chr4.4:15357342-15357361 | None:intergenic | 25.0% |
| !!! | ATGAACTGTTTTTTGTTACT+TGG | + | chr4.4:15356980-15356999 | MS.gene09025:intron | 25.0% |
| !!! | TGAACTGTTTTTTGTTACTT+GGG | + | chr4.4:15356981-15357000 | MS.gene09025:intron | 25.0% |
| AAAAAAGAGGATAAAGGAAG+AGG | + | chr4.4:15356000-15356019 | MS.gene09025:CDS | 30.0% | |
| AGACAGTGTAAACTTGATTT+AGG | + | chr4.4:15356416-15356435 | MS.gene09025:intron | 30.0% | |
| AGTATAGAGGTTTAAGTGAT+GGG | + | chr4.4:15357127-15357146 | MS.gene09025:CDS | 30.0% | |
| ATAACATGTTGGAAACAATG+CGG | - | chr4.4:15356941-15356960 | None:intergenic | 30.0% | |
| ATTTAGCAGCAGAGTAAAAA+AGG | - | chr4.4:15357374-15357393 | None:intergenic | 30.0% | |
| CGAAGAAAAAAAGAGGATAA+AGG | + | chr4.4:15355994-15356013 | MS.gene09025:CDS | 30.0% | |
| TAAACTTGATTTAGGTGGTT+TGG | + | chr4.4:15356424-15356443 | MS.gene09025:intron | 30.0% | |
| TAAGTATCTTGCAACTGAAA+AGG | + | chr4.4:15357038-15357057 | MS.gene09025:CDS | 30.0% | |
| TCGAGACATTTAGGTATATT+AGG | + | chr4.4:15357439-15357458 | MS.gene09025:intron | 30.0% | |
| TGATATCTGATCGAACATTA+TGG | + | chr4.4:15356578-15356597 | MS.gene09025:intron | 30.0% | |
| TTCAGGAATTGAAATCAACA+CGG | - | chr4.4:15356792-15356811 | None:intergenic | 30.0% | |
| ! | ATAATGTAACCTTCGATTTG+TGG | + | chr4.4:15356159-15356178 | MS.gene09025:intron | 30.0% |
| ! | CAATATATCAAGGAGTATAG+AGG | + | chr4.4:15357114-15357133 | MS.gene09025:CDS | 30.0% |
| ! | GTTTCAGAAAAAGAGTATGT+TGG | - | chr4.4:15357222-15357241 | None:intergenic | 30.0% |
| ! | TACACTGTCTTTTCTACAAA+AGG | - | chr4.4:15356406-15356425 | None:intergenic | 30.0% |
| ! | TGAAATTTTCTTCATTGGCA+TGG | - | chr4.4:15357337-15357356 | None:intergenic | 30.0% |
| !! | CATTTAGTTTCTGCATGTTT+TGG | + | chr4.4:15356742-15356761 | MS.gene09025:intron | 30.0% |
| !! | TGATGTTGGTAGTTATAGTA+GGG | + | chr4.4:15357480-15357499 | MS.gene09025:CDS | 30.0% |
| AAAATCGTGAAATTCAACGG+TGG | - | chr4.4:15355905-15355924 | None:intergenic | 35.0% | |
| AAACAATGCGGTGAAAAAAG+AGG | - | chr4.4:15356929-15356948 | None:intergenic | 35.0% | |
| AGGTATATTAGGTAGTTCTC+AGG | + | chr4.4:15357450-15357469 | MS.gene09025:intron | 35.0% | |
| CAGAGAATTTGTGTGGATAT+GGG | - | chr4.4:15357077-15357096 | None:intergenic | 35.0% | |
| CAGTGTAAACTTGATTTAGG+TGG | + | chr4.4:15356419-15356438 | MS.gene09025:intron | 35.0% | |
| GAGTATAGAGGTTTAAGTGA+TGG | + | chr4.4:15357126-15357145 | MS.gene09025:CDS | 35.0% | |
| TGTTTAACTGCAGCAATACT+TGG | + | chr4.4:15357005-15357024 | MS.gene09025:intron | 35.0% | |
| TTGCAACTGAAAAGGAAGAA+GGG | + | chr4.4:15357046-15357065 | MS.gene09025:CDS | 35.0% | |
| ! | AGCAGAGTAAAAAAGGCATA+TGG | - | chr4.4:15357367-15357386 | None:intergenic | 35.0% |
| ! | GATGTTTCTGTATCTTTGAC+TGG | + | chr4.4:15357162-15357181 | MS.gene09025:CDS | 35.0% |
| ! | TCTTTTCTTGACAATAGGCT+TGG | + | chr4.4:15356657-15356676 | MS.gene09025:intron | 35.0% |
| ! | TTAGCGTTGAGAAAGAGATT+CGG | - | chr4.4:15355863-15355882 | None:intergenic | 35.0% |
| !! | CTGATGTTGGTAGTTATAGT+AGG | + | chr4.4:15357479-15357498 | MS.gene09025:CDS | 35.0% |
| AAAAAGAGGAGTCCTACTGT+TGG | - | chr4.4:15356915-15356934 | None:intergenic | 40.0% | |
| AGGTGTAGTGAAACAAAGCT+AGG | - | chr4.4:15357254-15357273 | None:intergenic | 40.0% | |
| AGTAAGGAGAGTAGATCAGA+TGG | + | chr4.4:15356474-15356493 | MS.gene09025:intron | 40.0% | |
| ATGGGGTAGTGAATTACTAG+AGG | + | chr4.4:15356493-15356512 | MS.gene09025:intron | 40.0% | |
| CATGCTTATGTTGCTCAGTA+TGG | + | chr4.4:15357505-15357524 | MS.gene09025:CDS | 40.0% | |
| CTTGCAACTGAAAAGGAAGA+AGG | + | chr4.4:15357045-15357064 | MS.gene09025:CDS | 40.0% | |
| GAAGATATGGAACCAACAGT+AGG | + | chr4.4:15356900-15356919 | MS.gene09025:intron | 40.0% | |
| GAAGCGTGAGATCAAGAAAA+GGG | + | chr4.4:15355967-15355986 | MS.gene09025:CDS | 40.0% | |
| GATTTGTGGTGAAGCATATG+TGG | + | chr4.4:15356173-15356192 | MS.gene09025:intron | 40.0% | |
| GCAGAGAATTTGTGTGGATA+TGG | - | chr4.4:15357078-15357097 | None:intergenic | 40.0% | |
| GGATAAGAGAATTACCCTTC+TGG | - | chr4.4:15356032-15356051 | None:intergenic | 40.0% | |
| GGGAGAACGAAGAAAAAAAG+AGG | + | chr4.4:15355987-15356006 | MS.gene09025:CDS | 40.0% | |
| GTAAGGAGAGTAGATCAGAT+GGG | + | chr4.4:15356475-15356494 | MS.gene09025:intron | 40.0% | |
| TAAGGAGAGTAGATCAGATG+GGG | + | chr4.4:15356476-15356495 | MS.gene09025:intron | 40.0% | |
| TAGTGAATTACTAGAGGCAG+TGG | + | chr4.4:15356499-15356518 | MS.gene09025:intron | 40.0% | |
| TATGCTTCACCACAAATCGA+AGG | - | chr4.4:15356171-15356190 | None:intergenic | 40.0% | |
| TGAAGCGTGAGATCAAGAAA+AGG | + | chr4.4:15355966-15355985 | MS.gene09025:CDS | 40.0% | |
| TGCTGTGATTCGAGACATTT+AGG | + | chr4.4:15357430-15357449 | MS.gene09025:intron | 40.0% | |
| ACCAAGCTTATGCCACTAAG+TGG | - | chr4.4:15356629-15356648 | None:intergenic | 45.0% | |
| AGCTGCTGATGAGGAAGATA+TGG | + | chr4.4:15356887-15356906 | MS.gene09025:CDS | 45.0% | |
| ATCGTGAAATTCAACGGTGG+TGG | - | chr4.4:15355902-15355921 | None:intergenic | 45.0% | |
| ATGGTGGCAGAGAATTTGTG+TGG | - | chr4.4:15357084-15357103 | None:intergenic | 45.0% | |
| CAAGCTTATGCCACTAAGTG+GGG | - | chr4.4:15356627-15356646 | None:intergenic | 45.0% | |
| CCAAGCTTATGCCACTAAGT+GGG | - | chr4.4:15356628-15356647 | None:intergenic | 45.0% | |
| CGGGCGAAACTATAAGCAAA+AGG | + | chr4.4:15355829-15355848 | MS.gene09025:CDS | 45.0% | |
| GAGATAGAGAGAGAGAGTTG+TGG | + | chr4.4:15356375-15356394 | MS.gene09025:intron | 45.0% | |
| GCTTATGTTGCTCAGTATGG+AGG | + | chr4.4:15357508-15357527 | MS.gene09025:CDS | 45.0% | |
| TAGAGAGAGAGAGTTGTGGT+AGG | + | chr4.4:15356379-15356398 | MS.gene09025:intron | 45.0% | |
| TCAGTATGGAGGTCTGCATA+TGG | + | chr4.4:15357519-15357538 | MS.gene09025:CDS | 45.0% | |
| TCTCAGGAAGATGCTGATGT+TGG | + | chr4.4:15357466-15357485 | MS.gene09025:CDS | 45.0% | |
| TGCAGCAATACTTGGAGAAC+AGG | + | chr4.4:15357013-15357032 | MS.gene09025:intron | 45.0% | |
| TTTGCTTATAGTTTCGCCCG+CGG | - | chr4.4:15355829-15355848 | None:intergenic | 45.0% | |
| ! | AAATTCAACGGTGGTGGTGA+TGG | - | chr4.4:15355896-15355915 | None:intergenic | 45.0% |
| AGGAAGAGGAAAGAGCCAGA+AGG | + | chr4.4:15356014-15356033 | MS.gene09025:CDS | 50.0% | |
| ATGGAGAGAGAGAGAGAGAG+AGG | - | chr4.4:15357274-15357293 | None:intergenic | 50.0% | |
| CCCACTTAGTGGCATAAGCT+TGG | + | chr4.4:15356625-15356644 | MS.gene09025:intron | 50.0% | |
| CTTATGCCACTAAGTGGGGT+CGG | - | chr4.4:15356623-15356642 | None:intergenic | 50.0% | |
| GGAAGAGGAAAGAGCCAGAA+GGG | + | chr4.4:15356015-15356034 | MS.gene09025:CDS | 50.0% | |
| ACTAAGTGGGGTCGGCTACA+CGG | - | chr4.4:15356615-15356634 | None:intergenic | 55.0% | |
| AGCTGCAGGTCTGTTCTCGT+TGG | - | chr4.4:15356871-15356890 | None:intergenic | 55.0% | |
| GAGCGAGAGAGAGAGAGAGA+TGG | - | chr4.4:15357293-15357312 | None:intergenic | 55.0% | |
| TCTTCCTCATCAGCAGCTGC+AGG | - | chr4.4:15356885-15356904 | None:intergenic | 55.0% | |
| ACAACCTCCTTCCGATCCCC+CGG | + | chr4.4:15355791-15355810 | MS.gene09025:CDS | 60.0% | |
| CAGACCTGCAGCTGCTGATG+AGG | + | chr4.4:15356878-15356897 | MS.gene09025:CDS | 60.0% | |
| CTTATAGTTTCGCCCGCGGC+GGG | - | chr4.4:15355825-15355844 | None:intergenic | 60.0% | |
| GCTTATAGTTTCGCCCGCGG+CGG | - | chr4.4:15355826-15355845 | None:intergenic | 60.0% | |
| GTGTAGCCGACCCCACTTAG+TGG | + | chr4.4:15356614-15356633 | MS.gene09025:intron | 60.0% | |
| AGTTTCGCCCGCGGCGGGAT+CGG | - | chr4.4:15355820-15355839 | None:intergenic | 70.0% | |
| GGGATCGGTGGCCGGGGGAT+CGG | - | chr4.4:15355805-15355824 | None:intergenic | 75.0% | |
| GTGGCCGGGGGATCGGAAGG+AGG | - | chr4.4:15355798-15355817 | None:intergenic | 75.0% | |
| TCGGTGGCCGGGGGATCGGA+AGG | - | chr4.4:15355801-15355820 | None:intergenic | 75.0% | |
| ! | TTCGCCCGCGGCGGGATCGG+TGG | - | chr4.4:15355817-15355836 | None:intergenic | 80.0% |
| ! | CCCGCGGCGGGATCGGTGGC+CGG | - | chr4.4:15355813-15355832 | None:intergenic | 85.0% |
| ! | CCCGGCCACCGATCCCGCCG+CGG | + | chr4.4:15355809-15355828 | MS.gene09025:CDS | 85.0% |
| ! | CCGCGGCGGGATCGGTGGCC+GGG | - | chr4.4:15355812-15355831 | None:intergenic | 85.0% |
| ! | CCGGCCACCGATCCCGCCGC+GGG | + | chr4.4:15355810-15355829 | MS.gene09025:CDS | 85.0% |
| ! | CGCGGCGGGATCGGTGGCCG+GGG | - | chr4.4:15355811-15355830 | None:intergenic | 85.0% |
| ! | GCGGCGGGATCGGTGGCCGG+GGG | - | chr4.4:15355810-15355829 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 15355786 | 15357552 | 15355786 | ID=MS.gene09025 |
| chr4.4 | mRNA | 15355786 | 15357552 | 15355786 | ID=MS.gene09025.t1;Parent=MS.gene09025 |
| chr4.4 | exon | 15355786 | 15355850 | 15355786 | ID=MS.gene09025.t1.exon1;Parent=MS.gene09025.t1 |
| chr4.4 | CDS | 15355786 | 15355850 | 15355786 | ID=cds.MS.gene09025.t1;Parent=MS.gene09025.t1 |
| chr4.4 | exon | 15355961 | 15356036 | 15355961 | ID=MS.gene09025.t1.exon2;Parent=MS.gene09025.t1 |
| chr4.4 | CDS | 15355961 | 15356036 | 15355961 | ID=cds.MS.gene09025.t1;Parent=MS.gene09025.t1 |
| chr4.4 | exon | 15356849 | 15356917 | 15356849 | ID=MS.gene09025.t1.exon3;Parent=MS.gene09025.t1 |
| chr4.4 | CDS | 15356849 | 15356917 | 15356849 | ID=cds.MS.gene09025.t1;Parent=MS.gene09025.t1 |
| chr4.4 | exon | 15357018 | 15357183 | 15357018 | ID=MS.gene09025.t1.exon4;Parent=MS.gene09025.t1 |
| chr4.4 | CDS | 15357018 | 15357183 | 15357018 | ID=cds.MS.gene09025.t1;Parent=MS.gene09025.t1 |
| chr4.4 | exon | 15357452 | 15357552 | 15357452 | ID=MS.gene09025.t1.exon5;Parent=MS.gene09025.t1 |
| chr4.4 | CDS | 15357452 | 15357552 | 15357452 | ID=cds.MS.gene09025.t1;Parent=MS.gene09025.t1 |
| Gene Sequence |
| Protein sequence |
