Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09272.t1 | XP_003629601.1 | 99.4 | 471 | 3 | 0 | 1 | 471 | 1 | 471 | 7.10E-279 | 969.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09272.t1 | O23254 | 88.7 | 471 | 53 | 0 | 1 | 471 | 1 | 471 | 9.5e-256 | 883.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09272.t1 | G7LH57 | 99.4 | 471 | 3 | 0 | 1 | 471 | 1 | 471 | 5.1e-279 | 969.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05986 | MS.gene09272 | 0.826315 | 2.90E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene09272 | MS.gene027729 | PPI |
| MS.gene09272 | MS.gene047182 | PPI |
| MS.gene09272 | MS.gene00638 | PPI |
| MS.gene09272 | MS.gene86222 | PPI |
| MS.gene09272 | MS.gene072040 | PPI |
| MS.gene09272 | MS.gene44289 | PPI |
| MS.gene09272 | MS.gene29165 | PPI |
| MS.gene09272 | MS.gene002066 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09272.t1 | MTR_8g081510 | 99.363 | 471 | 3 | 0 | 1 | 471 | 1 | 471 | 0.0 | 975 |
| MS.gene09272.t1 | MTR_3g084310 | 93.418 | 471 | 31 | 0 | 1 | 471 | 1 | 471 | 0.0 | 928 |
| MS.gene09272.t1 | MTR_3g084310 | 93.132 | 364 | 25 | 0 | 1 | 364 | 1 | 364 | 0.0 | 720 |
| MS.gene09272.t1 | MTR_2g006570 | 64.224 | 464 | 161 | 1 | 4 | 462 | 128 | 591 | 0.0 | 648 |
| MS.gene09272.t1 | MTR_3g073470 | 63.991 | 461 | 158 | 2 | 7 | 462 | 118 | 575 | 0.0 | 633 |
| MS.gene09272.t1 | MTR_2g006570 | 64.524 | 420 | 144 | 1 | 48 | 462 | 1 | 420 | 0.0 | 587 |
| MS.gene09272.t1 | MTR_5g067060 | 58.030 | 467 | 187 | 5 | 9 | 469 | 42 | 505 | 0.0 | 556 |
| MS.gene09272.t1 | MTR_5g030950 | 58.155 | 466 | 188 | 4 | 9 | 469 | 53 | 516 | 0.0 | 554 |
| MS.gene09272.t1 | MTR_2g018290 | 57.860 | 458 | 173 | 5 | 12 | 461 | 87 | 532 | 0.0 | 537 |
| MS.gene09272.t1 | MTR_7g108420 | 47.380 | 439 | 188 | 9 | 37 | 462 | 1 | 409 | 1.71e-126 | 374 |
| MS.gene09272.t1 | MTR_1g073580 | 35.526 | 152 | 92 | 2 | 317 | 462 | 83 | 234 | 1.60e-22 | 96.7 |
| MS.gene09272.t1 | MTR_1g073580 | 44.318 | 88 | 44 | 2 | 157 | 244 | 1 | 83 | 6.84e-18 | 83.6 |
| MS.gene09272.t1 | MTR_3g062030 | 59.494 | 79 | 28 | 1 | 274 | 352 | 13 | 87 | 3.24e-21 | 92.8 |
| MS.gene09272.t1 | MTR_7g070020 | 53.659 | 82 | 28 | 2 | 336 | 410 | 1 | 79 | 7.85e-20 | 85.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09272.t1 | AT4G13930 | 88.747 | 471 | 53 | 0 | 1 | 471 | 1 | 471 | 0.0 | 889 |
| MS.gene09272.t1 | AT4G13890 | 78.205 | 468 | 102 | 0 | 1 | 468 | 1 | 468 | 0.0 | 794 |
| MS.gene09272.t1 | AT4G13890 | 79.284 | 391 | 81 | 0 | 1 | 391 | 1 | 391 | 0.0 | 674 |
| MS.gene09272.t1 | AT1G36370 | 62.446 | 466 | 170 | 1 | 4 | 464 | 130 | 595 | 0.0 | 629 |
| MS.gene09272.t1 | AT1G22020 | 62.069 | 464 | 171 | 1 | 4 | 462 | 134 | 597 | 0.0 | 623 |
| MS.gene09272.t1 | AT1G22020 | 62.069 | 464 | 171 | 1 | 4 | 462 | 134 | 597 | 0.0 | 623 |
| MS.gene09272.t1 | AT4G32520 | 59.570 | 465 | 169 | 6 | 3 | 461 | 77 | 528 | 0.0 | 567 |
| MS.gene09272.t1 | AT4G32520 | 59.570 | 465 | 169 | 6 | 3 | 461 | 77 | 528 | 0.0 | 567 |
| MS.gene09272.t1 | AT4G37930 | 57.692 | 468 | 191 | 4 | 9 | 471 | 52 | 517 | 0.0 | 565 |
| MS.gene09272.t1 | AT5G26780 | 56.197 | 468 | 198 | 4 | 9 | 471 | 52 | 517 | 0.0 | 546 |
| MS.gene09272.t1 | AT5G26780 | 56.197 | 468 | 198 | 4 | 9 | 471 | 52 | 517 | 0.0 | 546 |
| MS.gene09272.t1 | AT5G26780 | 54.752 | 484 | 196 | 6 | 9 | 471 | 52 | 533 | 0.0 | 537 |
| MS.gene09272.t1 | AT5G26780 | 54.752 | 484 | 196 | 6 | 9 | 471 | 52 | 533 | 0.0 | 537 |
Find 150 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCTCAGGCTGGCCCTTCT+TGG | 0.198683 | 4.1:+14472943 | None:intergenic |
| ATTTGGTATGCCTGGTTTCC+TGG | 0.216412 | 4.1:-14471931 | MS.gene09272:CDS |
| TGGCCCTTCTTGGGTGGTTT+AGG | 0.220073 | 4.1:+14472953 | None:intergenic |
| TAATCCTCATGATCGGATTA+TGG | 0.228344 | 4.1:-14474449 | MS.gene09272:CDS |
| CTTTGAGAGTTTGCCGTATA+AGG | 0.255272 | 4.1:-14474344 | MS.gene09272:CDS |
| TCGATTAGGTCGTGGATCTC+TGG | 0.281015 | 4.1:+14474754 | None:intergenic |
| ACTCATGGTTACTATACTTC+TGG | 0.285243 | 4.1:-14474397 | MS.gene09272:CDS |
| TTCTCAGGCTGGCCCTTCTT+GGG | 0.286161 | 4.1:+14472944 | None:intergenic |
| GAGAAGTTCTCTTCTTCATT+TGG | 0.300016 | 4.1:-14471948 | MS.gene09272:CDS |
| ATTGGGATTATAAACGGTTT+AGG | 0.311040 | 4.1:-14474219 | MS.gene09272:CDS |
| TTGGGATTATAAACGGTTTA+GGG | 0.317920 | 4.1:-14474218 | MS.gene09272:CDS |
| ATGGGATTGGATCTTCCTTC+AGG | 0.332967 | 4.1:-14474430 | MS.gene09272:CDS |
| AATCCTCATGATCGGATTAT+GGG | 0.338677 | 4.1:-14474448 | MS.gene09272:CDS |
| CCTTGCTGTTGCCTTGAAAC+AGG | 0.346168 | 4.1:-14472837 | MS.gene09272:CDS |
| TCATATCGATCCACAATCTT+GGG | 0.348360 | 4.1:-14474533 | MS.gene09272:CDS |
| GAAAAGGACTTTGAGAAGAT+TGG | 0.349310 | 4.1:-14472095 | MS.gene09272:CDS |
| TCTTCTTCATTTGGTATGCC+TGG | 0.356704 | 4.1:-14471939 | MS.gene09272:CDS |
| TTCATATCGATCCACAATCT+TGG | 0.361702 | 4.1:-14474534 | MS.gene09272:CDS |
| TAGTGGCCTTGTTGCTGCTC+AGG | 0.366141 | 4.1:-14474146 | MS.gene09272:intron |
| TTGTGGGATCTTCGCCCTCT+TGG | 0.377790 | 4.1:-14472692 | MS.gene09272:CDS |
| CGATTAGGTCGTGGATCTCT+GGG | 0.381977 | 4.1:+14474755 | None:intergenic |
| TTGTTACCCCATTCGTTAAC+GGG | 0.382478 | 4.1:+14474796 | None:intergenic |
| CCACCGTAGTAACGGTTTCC+CGG | 0.387416 | 4.1:+14474613 | None:intergenic |
| TTCTAGAGGCTTGGTTGAAA+AGG | 0.401166 | 4.1:-14472111 | MS.gene09272:CDS |
| TAGTGCTTACCCTAGGGATT+GGG | 0.404659 | 4.1:-14474236 | MS.gene09272:CDS |
| CATGCCTTCGGAGTATTTGT+TGG | 0.404874 | 4.1:+14474636 | None:intergenic |
| ACAAGAGTTTGAGGGGTCCT+AGG | 0.411398 | 4.1:-14473003 | MS.gene09272:CDS |
| CTAGGGATTGGGATTATAAA+CGG | 0.417514 | 4.1:-14474225 | MS.gene09272:CDS |
| TTGAAACAGGCCATGTCACC+TGG | 0.428213 | 4.1:-14472824 | MS.gene09272:CDS |
| AAATACTCCGAAGGCATGCC+GGG | 0.431184 | 4.1:-14474631 | MS.gene09272:CDS |
| TGCATTGGCCTTAACTTGCT+TGG | 0.435848 | 4.1:+14472787 | None:intergenic |
| GGCCATGTCACCTGGGTTCA+AGG | 0.436813 | 4.1:-14472816 | MS.gene09272:CDS |
| GAAGGATTTCAACAAGGGCT+TGG | 0.437560 | 4.1:-14472009 | MS.gene09272:CDS |
| TTACCAACTCGTACTCCTCC+TGG | 0.440340 | 4.1:+14472486 | None:intergenic |
| TTTGTTACCCCATTCGTTAA+CGG | 0.443616 | 4.1:+14474795 | None:intergenic |
| GGCCATGACTTCTAGAGGCT+TGG | 0.443671 | 4.1:-14472120 | MS.gene09272:CDS |
| TCATGATCGGATTATGGGAT+TGG | 0.447111 | 4.1:-14474443 | MS.gene09272:CDS |
| AGGTGACATGGCCTGTTTCA+AGG | 0.449189 | 4.1:+14472826 | None:intergenic |
| GTAGTGCTTACCCTAGGGAT+TGG | 0.449816 | 4.1:-14474237 | MS.gene09272:CDS |
| GATAGCAGTGCCTTGGCTCC+AGG | 0.451399 | 4.1:-14472504 | MS.gene09272:CDS |
| ACGGTTTCCCGGCATGCCTT+CGG | 0.453815 | 4.1:+14474624 | None:intergenic |
| CAACAGCAAGGGCACCAATC+TGG | 0.454079 | 4.1:+14472849 | None:intergenic |
| GGCATATGCCAAGCAAGTTA+AGG | 0.458758 | 4.1:-14472795 | MS.gene09272:CDS |
| TATGGATCCCGTTAACGAAT+GGG | 0.460396 | 4.1:-14474803 | MS.gene09272:CDS |
| CTTCGCCCTCTTGGATTGAC+TGG | 0.475593 | 4.1:-14472683 | MS.gene09272:intron |
| CAACAACTCACAAGAGTTTG+AGG | 0.475648 | 4.1:-14473012 | MS.gene09272:CDS |
| GTGGTGGTAGTGCTTACCCT+AGG | 0.483011 | 4.1:-14474243 | MS.gene09272:CDS |
| AAATCGTAAACTGCATTCTC+AGG | 0.485003 | 4.1:+14472929 | None:intergenic |
| ATTTCCAATGGCAACTGCAT+TGG | 0.485964 | 4.1:+14472772 | None:intergenic |
| AGTTTGAGGGGTCCTAGGGC+TGG | 0.488241 | 4.1:-14472998 | MS.gene09272:CDS |
| CAAATACTCCGAAGGCATGC+CGG | 0.491638 | 4.1:-14474632 | MS.gene09272:CDS |
| CGTAAACTGCATTCTCAGGC+TGG | 0.492457 | 4.1:+14472933 | None:intergenic |
| CTTCTGAAGGATTTCAACAA+GGG | 0.500755 | 4.1:-14472014 | MS.gene09272:CDS |
| GTCGTCGAATTCACCTTATA+CGG | 0.506731 | 4.1:+14474331 | None:intergenic |
| AAGGCCAATGCAGTTGCCAT+TGG | 0.512235 | 4.1:-14472776 | MS.gene09272:CDS |
| TCAGGCTGGCCCTTCTTGGG+TGG | 0.515292 | 4.1:+14472947 | None:intergenic |
| GGGCTGGAATGATCTTCTAC+AGG | 0.516037 | 4.1:-14472982 | MS.gene09272:CDS |
| GGGACCTAAACCACCCAAGA+AGG | 0.517255 | 4.1:-14472957 | MS.gene09272:CDS |
| TGAGAACCATCTTGTGTTGT+GGG | 0.518139 | 4.1:-14472708 | MS.gene09272:CDS |
| TCAGGTGGACATTTGACTCA+TGG | 0.518530 | 4.1:-14474412 | MS.gene09272:CDS |
| TGGAAATTACTTGATGAGCA+AGG | 0.520445 | 4.1:-14472756 | MS.gene09272:CDS |
| CGTTTATAATCCCAATCCCT+AGG | 0.523617 | 4.1:+14474226 | None:intergenic |
| AGGCCTAGGTTGATTATCTG+TGG | 0.524395 | 4.1:-14474262 | MS.gene09272:CDS |
| GTTAACGTTCAGCCTTACTC+TGG | 0.524720 | 4.1:-14474508 | MS.gene09272:CDS |
| GGATTTCAACAAGGGCTTGG+TGG | 0.525840 | 4.1:-14472006 | MS.gene09272:CDS |
| CAAGAGTTTGAGGGGTCCTA+GGG | 0.529217 | 4.1:-14473002 | MS.gene09272:CDS |
| GTCGTGGATCTCTGGGTCGA+CGG | 0.531722 | 4.1:+14474762 | None:intergenic |
| TTCGCCGGTGAACCAGAGTA+AGG | 0.533517 | 4.1:+14474496 | None:intergenic |
| TAGGTTGGAGGAGAAAGCGT+TGG | 0.534852 | 4.1:-14474290 | MS.gene09272:CDS |
| GGAAATTACTTGATGAGCAA+GGG | 0.542211 | 4.1:-14472755 | MS.gene09272:CDS |
| CACAATGTCACAGTACTCAA+AGG | 0.544775 | 4.1:+14473039 | None:intergenic |
| ACAATGTCACAGTACTCAAA+GGG | 0.547706 | 4.1:+14473040 | None:intergenic |
| TGGTGGTAGTGCTTACCCTA+GGG | 0.548765 | 4.1:-14474242 | MS.gene09272:CDS |
| AACAACTCACAAGAGTTTGA+GGG | 0.550530 | 4.1:-14473011 | MS.gene09272:CDS |
| TATTGATTATGATAGGTTGG+AGG | 0.550910 | 4.1:-14474302 | MS.gene09272:CDS |
| TTGGCATATGCCTTGAACCC+AGG | 0.551473 | 4.1:+14472806 | None:intergenic |
| AAGCTTGAAGAGCGCGTGAA+CGG | 0.551498 | 4.1:+14474557 | None:intergenic |
| TAGAAGATCATTCCAGCCCT+AGG | 0.552646 | 4.1:+14472986 | None:intergenic |
| TGCCTTGAACCCAGGTGACA+TGG | 0.553241 | 4.1:+14472814 | None:intergenic |
| ATTGTGAGGACCACCTTGAA+GGG | 0.554639 | 4.1:+14472874 | None:intergenic |
| CATATCGATCCACAATCTTG+GGG | 0.560138 | 4.1:-14474532 | MS.gene09272:CDS |
| ATTCGTTACCACCGTAGTAA+CGG | 0.560321 | 4.1:+14474605 | None:intergenic |
| TTATGGATCCCGTTAACGAA+TGG | 0.563507 | 4.1:-14474804 | MS.gene09272:CDS |
| GATGTTCTTTGCAGGAAACA+AGG | 0.566091 | 4.1:-14472583 | MS.gene09272:intron |
| TGAGGACCACCTTGAAGGGA+AGG | 0.566539 | 4.1:+14472878 | None:intergenic |
| CAAGGGCTTGGTGGACAACA+AGG | 0.566901 | 4.1:-14471997 | MS.gene09272:CDS |
| AACCAAGCCTCTAGAAGTCA+TGG | 0.567694 | 4.1:+14472118 | None:intergenic |
| GGTCCTCACAATCACCAGAT+TGG | 0.567733 | 4.1:-14472863 | MS.gene09272:CDS |
| GATTGTGAGGACCACCTTGA+AGG | 0.568372 | 4.1:+14472873 | None:intergenic |
| GAGAGCTTCGATGACGGCGA+AGG | 0.570081 | 4.1:+14474672 | None:intergenic |
| ATCTCAGATACCAGGAAACC+AGG | 0.570656 | 4.1:+14471921 | None:intergenic |
| ACGTTAACTCCCCAAGATTG+TGG | 0.570906 | 4.1:+14474523 | None:intergenic |
| CATGGTTACTATACTTCTGG+TGG | 0.572834 | 4.1:-14474394 | MS.gene09272:CDS |
| TTCTGGTGGGAAGAAGATCT+CGG | 0.577762 | 4.1:-14474380 | MS.gene09272:CDS |
| TCGTACTCCTCCTGGAGCCA+AGG | 0.577883 | 4.1:+14472494 | None:intergenic |
| GCTCATCAAGTAATTTCCAA+TGG | 0.578871 | 4.1:+14472760 | None:intergenic |
| GGAGCATGGAAAACTTCTGA+AGG | 0.579867 | 4.1:-14472027 | MS.gene09272:CDS |
| GTGTAAGCAGCGAAATTCGC+CGG | 0.580461 | 4.1:+14474481 | None:intergenic |
| CTAGAGATCCAGAAGGAGCA+TGG | 0.581707 | 4.1:-14472041 | MS.gene09272:CDS |
| CTGAGAACCATCTTGTGTTG+TGG | 0.583570 | 4.1:-14472709 | MS.gene09272:CDS |
| GGATTGGATCTTCCTTCAGG+TGG | 0.584238 | 4.1:-14474427 | MS.gene09272:CDS |
| ACTTCTGAAGGATTTCAACA+AGG | 0.584978 | 4.1:-14472015 | MS.gene09272:CDS |
| AAGGGATACAGTCTTGTCAC+TGG | 0.587154 | 4.1:-14472737 | MS.gene09272:CDS |
| TTCGCCGTCATCGAAGCTCT+CGG | 0.587338 | 4.1:-14474670 | MS.gene09272:CDS |
| TGGAATGATCTTCTACAGGA+AGG | 0.588696 | 4.1:-14472978 | MS.gene09272:CDS |
| TGAGTGTCACAGCACGGTGA+AGG | 0.589218 | 4.1:+14472066 | None:intergenic |
| ATGCCGGGAAACCGTTACTA+CGG | 0.595584 | 4.1:-14474616 | MS.gene09272:CDS |
| GCTGCCGAGAGCTTCGATGA+CGG | 0.601481 | 4.1:+14474666 | None:intergenic |
| GAAGATCCCACAACACAAGA+TGG | 0.603113 | 4.1:+14472702 | None:intergenic |
| CTGTTTCAAGGCAACAGCAA+GGG | 0.603551 | 4.1:+14472838 | None:intergenic |
| CCTAGGTTGATTATCTGTGG+TGG | 0.604842 | 4.1:-14474259 | MS.gene09272:CDS |
| AGTTCTGTTAACAGGTGCTC+CGG | 0.607108 | 4.1:-14472141 | MS.gene09272:intron |
| TATAAGGTGAATTCGACGAC+TGG | 0.610662 | 4.1:-14474328 | MS.gene09272:CDS |
| GGAATGATCTTCTACAGGAA+GGG | 0.611076 | 4.1:-14472977 | MS.gene09272:CDS |
| GGATACAGTCTTGTCACTGG+TGG | 0.612060 | 4.1:-14472734 | MS.gene09272:CDS |
| TGAGTCAAATGTCCACCTGA+AGG | 0.612892 | 4.1:+14474415 | None:intergenic |
| GGACCTAAACCACCCAAGAA+GGG | 0.613785 | 4.1:-14472956 | MS.gene09272:CDS |
| GCTCCGGCCATGACTTCTAG+AGG | 0.616605 | 4.1:-14472125 | MS.gene09272:CDS |
| CCGTGCTTAATCCTCATGAT+CGG | 0.621696 | 4.1:-14474456 | MS.gene09272:CDS |
| TGTACTTCATCTCAGATACC+AGG | 0.622326 | 4.1:+14471913 | None:intergenic |
| GTTTATAATCCCAATCCCTA+GGG | 0.625521 | 4.1:+14474227 | None:intergenic |
| AGGGATGTTGCTGATAAGTG+TGG | 0.626741 | 4.1:-14474199 | MS.gene09272:CDS |
| TGAAACAGGCCATGTCACCT+GGG | 0.627178 | 4.1:-14472823 | MS.gene09272:CDS |
| GCACCAATCTGGTGATTGTG+AGG | 0.629254 | 4.1:+14472860 | None:intergenic |
| AAGCCTCTAGAAGTCATGGC+CGG | 0.629761 | 4.1:+14472122 | None:intergenic |
| CCTGTTTCAAGGCAACAGCA+AGG | 0.630010 | 4.1:+14472837 | None:intergenic |
| TTTATACCTGAGCAGCAACA+AGG | 0.632475 | 4.1:+14474140 | None:intergenic |
| CGGAATCGAACTCATCGCAT+CGG | 0.632638 | 4.1:-14474707 | MS.gene09272:CDS |
| GGTATCTGAGATGAAGTACA+AGG | 0.632761 | 4.1:-14471910 | MS.gene09272:CDS |
| GCTCCAGGAGGAGTACGAGT+TGG | 0.634787 | 4.1:-14472489 | MS.gene09272:intron |
| TCAGCCTTACTCTGGTTCAC+CGG | 0.636199 | 4.1:-14474500 | MS.gene09272:CDS |
| CCACCACAGATAATCAACCT+AGG | 0.638606 | 4.1:+14474259 | None:intergenic |
| CTTTACCAGTCAATCCAAGA+GGG | 0.641081 | 4.1:+14472678 | None:intergenic |
| ATGGATCCCGTTAACGAATG+GGG | 0.646563 | 4.1:-14474802 | MS.gene09272:CDS |
| AATCCCATAATCCGATCATG+AGG | 0.648526 | 4.1:+14474445 | None:intergenic |
| ATGGTTACTATACTTCTGGT+GGG | 0.651704 | 4.1:-14474393 | MS.gene09272:CDS |
| TCTGGGTCGACGGTTACGAG+TGG | 0.653406 | 4.1:+14474772 | None:intergenic |
| TTAACCAACAAATACTCCGA+AGG | 0.658341 | 4.1:-14474640 | MS.gene09272:CDS |
| ATGCGATGAGTTCGATTCCG+CGG | 0.660307 | 4.1:+14474710 | None:intergenic |
| GAGGACCACCTTGAAGGGAA+GGG | 0.667267 | 4.1:+14472879 | None:intergenic |
| TGTTGACTGTGATGTTACAG+AGG | 0.668976 | 4.1:+14472544 | None:intergenic |
| CCGGGAAACCGTTACTACGG+TGG | 0.675395 | 4.1:-14474613 | MS.gene09272:CDS |
| ACAACTCACAAGAGTTTGAG+GGG | 0.676117 | 4.1:-14473010 | MS.gene09272:CDS |
| CCGATCATGAGGATTAAGCA+CGG | 0.689739 | 4.1:+14474456 | None:intergenic |
| GTTCTTTGCAGGAAACAAGG+TGG | 0.691862 | 4.1:-14472580 | MS.gene09272:intron |
| AGCAGTGCCTTGGCTCCAGG+AGG | 0.693630 | 4.1:-14472501 | MS.gene09272:CDS |
| CCTTTACCAGTCAATCCAAG+AGG | 0.696201 | 4.1:+14472677 | None:intergenic |
| CTAGTGTGAGTGTCACAGCA+CGG | 0.697489 | 4.1:+14472060 | None:intergenic |
| ACTCACACTAGAGATCCAGA+AGG | 0.729137 | 4.1:-14472048 | MS.gene09272:CDS |
| ATCATGAGGATTAAGCACGG+CGG | 0.835014 | 4.1:+14474459 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAGATCCATTAAATTA+AGG | + | chr4.1:14472806-14472825 | None:intergenic | 15.0% |
| !! | AAGAACATCAATAATATTTA+GGG | - | chr4.1:14473237-14473256 | MS.gene09272:intron | 15.0% |
| !! | AATAAGATCCATTAAATTAA+GGG | + | chr4.1:14472805-14472824 | None:intergenic | 15.0% |
| !! | TAAATATTATTGATGTTCTT+GGG | + | chr4.1:14473237-14473256 | None:intergenic | 15.0% |
| !! | TATGAATCTAATTAACATAA+CGG | + | chr4.1:14472623-14472642 | None:intergenic | 15.0% |
| !! | TTGAGTAAAATATAAAACAA+AGG | + | chr4.1:14474533-14474552 | None:intergenic | 15.0% |
| !!! | TTTGTTTTATATTTTACTCA+AGG | - | chr4.1:14474532-14474551 | MS.gene09272:CDS | 15.0% |
| !!! | TTTTTTTTTTTTTTTTGTGG+TGG | - | chr4.1:14473083-14473102 | MS.gene09272:intron | 15.0% |
| !! | ACAAATCAAATAATACTACT+TGG | + | chr4.1:14474388-14474407 | None:intergenic | 20.0% |
| !! | CAAGAACATCAATAATATTT+AGG | - | chr4.1:14473236-14473255 | MS.gene09272:intron | 20.0% |
| !! | CTAAATATTATTGATGTTCT+TGG | + | chr4.1:14473238-14473257 | None:intergenic | 20.0% |
| !! | TAATGTAAGGATTTATTAGA+AGG | - | chr4.1:14473528-14473547 | MS.gene09272:intron | 20.0% |
| !! | TATACAGTAACAAGATTAAA+AGG | + | chr4.1:14474483-14474502 | None:intergenic | 20.0% |
| !!! | ATAATATGACTTGTTTTGTT+TGG | - | chr4.1:14473591-14473610 | MS.gene09272:intron | 20.0% |
| !!! | GCATATTTACAATTTTTACA+TGG | + | chr4.1:14474420-14474439 | None:intergenic | 20.0% |
| !!! | TATGGACTTAACTTTATTTT+CGG | - | chr4.1:14474253-14474272 | MS.gene09272:CDS | 20.0% |
| !!! | TTTTATTGATTATGATAGGT+TGG | - | chr4.1:14472402-14472421 | MS.gene09272:intron | 20.0% |
| ! | AATAAATCCTTACATTACCA+AGG | + | chr4.1:14473525-14473544 | None:intergenic | 25.0% |
| ! | ATTAAATTAAGGGAAATGTC+GGG | + | chr4.1:14472795-14472814 | None:intergenic | 25.0% |
| ! | CATTAAATTAAGGGAAATGT+CGG | + | chr4.1:14472796-14472815 | None:intergenic | 25.0% |
| ! | TACTCCTTATAGTTATACTA+TGG | + | chr4.1:14473465-14473484 | None:intergenic | 25.0% |
| ! | TATTATTCATAAGCTTGTCA+AGG | + | chr4.1:14473376-14473395 | None:intergenic | 25.0% |
| ! | TGTGTAATCAATGCATTAAA+AGG | + | chr4.1:14472727-14472746 | None:intergenic | 25.0% |
| ! | TTTATATTGCGTACTATTTC+TGG | - | chr4.1:14474082-14474101 | MS.gene09272:intron | 25.0% |
| !! | ATCGATAAACTTGTCTTTTA+AGG | - | chr4.1:14473048-14473067 | MS.gene09272:CDS | 25.0% |
| !! | CAAGTTGTTGTAAATTTTGT+TGG | - | chr4.1:14474306-14474325 | MS.gene09272:CDS | 25.0% |
| !!! | CTGGTTTTATTGATTATGAT+AGG | - | chr4.1:14472398-14472417 | MS.gene09272:intron | 25.0% |
| AAAAATAAGCCAATCCAAAC+GGG | + | chr4.1:14473263-14473282 | None:intergenic | 30.0% | |
| AAAAATTAGCCAATCCAAAC+GGG | - | chr4.1:14473439-14473458 | MS.gene09272:intron | 30.0% | |
| AATAGTACGCAATATAAACC+AGG | + | chr4.1:14474080-14474099 | None:intergenic | 30.0% | |
| ATTGGGATTATAAACGGTTT+AGG | - | chr4.1:14472488-14472507 | MS.gene09272:intron | 30.0% | |
| CAAAAATAAGCCAATCCAAA+CGG | + | chr4.1:14473264-14473283 | None:intergenic | 30.0% | |
| CAAAAATTAGCCAATCCAAA+CGG | - | chr4.1:14473438-14473457 | MS.gene09272:intron | 30.0% | |
| CGACATTTCCCTTAATTTAA+TGG | - | chr4.1:14472794-14472813 | MS.gene09272:CDS | 30.0% | |
| CTACTTGGTAAAGAAATGAA+AGG | + | chr4.1:14474373-14474392 | None:intergenic | 30.0% | |
| CTATGATAAACATTGATGCT+AGG | - | chr4.1:14473199-14473218 | MS.gene09272:intron | 30.0% | |
| GTTGGAAATCAATTTGATTG+AGG | - | chr4.1:14474324-14474343 | MS.gene09272:CDS | 30.0% | |
| TAAGTTCTCACTAACGAAAA+TGG | - | chr4.1:14473320-14473339 | MS.gene09272:intron | 30.0% | |
| TTAAATTAAGGGAAATGTCG+GGG | + | chr4.1:14472794-14472813 | None:intergenic | 30.0% | |
| TTCACTGTAAACAAACTATG+AGG | + | chr4.1:14472924-14472943 | None:intergenic | 30.0% | |
| TTGGGATTATAAACGGTTTA+GGG | - | chr4.1:14472489-14472508 | MS.gene09272:intron | 30.0% | |
| TTTATCATAGCCCAGTTTAT+AGG | + | chr4.1:14473189-14473208 | None:intergenic | 30.0% | |
| ! | AACCAGGCAAGATAAATTTT+AGG | + | chr4.1:14474064-14474083 | None:intergenic | 30.0% |
| ! | TATTGATTATGATAGGTTGG+AGG | - | chr4.1:14472405-14472424 | MS.gene09272:intron | 30.0% |
| ! | TATTTTCGGAGTCTAAACTT+GGG | - | chr4.1:14474267-14474286 | MS.gene09272:CDS | 30.0% |
| ! | TTATTGATGTTCTTGGGTTT+TGG | + | chr4.1:14473231-14473250 | None:intergenic | 30.0% |
| ! | TTATTTTCGGAGTCTAAACT+TGG | - | chr4.1:14474266-14474285 | MS.gene09272:CDS | 30.0% |
| ! | TTGTCTCAAAGCTTTTCTTA+CGG | - | chr4.1:14473565-14473584 | MS.gene09272:intron | 30.0% |
| ! | TTGTTGTTATCTATTCCATC+TGG | - | chr4.1:14472978-14472997 | MS.gene09272:CDS | 30.0% |
| !! | AGTTGGTAAGAAACTTTGTA+TGG | - | chr4.1:14474235-14474254 | MS.gene09272:CDS | 30.0% |
| !! | TAGTTATTTGTTGTGTGTAC+AGG | - | chr4.1:14473633-14473652 | MS.gene09272:intron | 30.0% |
| !!! | GACGTTTTTCTTTTTCGATT+AGG | + | chr4.1:14471970-14471989 | None:intergenic | 30.0% |
| !!! | GTCAACAAAAATGCTGTTTT+TGG | - | chr4.1:14474179-14474198 | MS.gene09272:CDS | 30.0% |
| !!! | TTGATTATTTTTAGCCACCT+TGG | - | chr4.1:14473505-14473524 | MS.gene09272:intron | 30.0% |
| !!! | TTTTTTTTTTTTGTGGTGGC+CGG | - | chr4.1:14473087-14473106 | MS.gene09272:intron | 30.0% |
| AAATCCTTACATTACCAAGG+TGG | + | chr4.1:14473522-14473541 | None:intergenic | 35.0% | |
| AAATCGTAAACTGCATTCTC+AGG | + | chr4.1:14473781-14473800 | None:intergenic | 35.0% | |
| AACAACTCACAAGAGTTTGA+GGG | - | chr4.1:14473696-14473715 | MS.gene09272:intron | 35.0% | |
| AATCCTCATGATCGGATTAT+GGG | - | chr4.1:14472259-14472278 | MS.gene09272:intron | 35.0% | |
| ACAATGCCTTACCTATAAAC+TGG | - | chr4.1:14473175-14473194 | MS.gene09272:intron | 35.0% | |
| ACAATGTCACAGTACTCAAA+GGG | + | chr4.1:14473670-14473689 | None:intergenic | 35.0% | |
| ACTCATGGTTACTATACTTC+TGG | - | chr4.1:14472310-14472329 | MS.gene09272:intron | 35.0% | |
| ATAAAGCCCATTCATTTGTC+TGG | + | chr4.1:14473123-14473142 | None:intergenic | 35.0% | |
| ATGGTTACTATACTTCTGGT+GGG | - | chr4.1:14472314-14472333 | MS.gene09272:intron | 35.0% | |
| CAATGCCTTACCTATAAACT+GGG | - | chr4.1:14473176-14473195 | MS.gene09272:intron | 35.0% | |
| CACCTAAAATTTATCTTGCC+TGG | - | chr4.1:14474059-14474078 | MS.gene09272:intron | 35.0% | |
| CTAGGGATTGGGATTATAAA+CGG | - | chr4.1:14472482-14472501 | MS.gene09272:intron | 35.0% | |
| GAGAAGTTCTCTTCTTCATT+TGG | - | chr4.1:14474759-14474778 | MS.gene09272:CDS | 35.0% | |
| GCTCATCAAGTAATTTCCAA+TGG | + | chr4.1:14473950-14473969 | None:intergenic | 35.0% | |
| GGAAATTACTTGATGAGCAA+GGG | - | chr4.1:14473952-14473971 | MS.gene09272:intron | 35.0% | |
| GTTTATAATCCCAATCCCTA+GGG | + | chr4.1:14472483-14472502 | None:intergenic | 35.0% | |
| TAAAGCCCATTCATTTGTCT+GGG | + | chr4.1:14473122-14473141 | None:intergenic | 35.0% | |
| TAAATTAAGGGAAATGTCGG+GGG | + | chr4.1:14472793-14472812 | None:intergenic | 35.0% | |
| TAATCCTCATGATCGGATTA+TGG | - | chr4.1:14472258-14472277 | MS.gene09272:intron | 35.0% | |
| TCATATCGATCCACAATCTT+GGG | - | chr4.1:14472174-14472193 | MS.gene09272:intron | 35.0% | |
| TCTTGTTCCGTTGAATTAGA+GGG | - | chr4.1:14472884-14472903 | MS.gene09272:CDS | 35.0% | |
| TGGAAATTACTTGATGAGCA+AGG | - | chr4.1:14473951-14473970 | MS.gene09272:intron | 35.0% | |
| TTAACCAACAAATACTCCGA+AGG | - | chr4.1:14472067-14472086 | MS.gene09272:CDS | 35.0% | |
| TTCATATCGATCCACAATCT+TGG | - | chr4.1:14472173-14472192 | MS.gene09272:intron | 35.0% | |
| TTCTTGTTCCGTTGAATTAG+AGG | - | chr4.1:14472883-14472902 | MS.gene09272:CDS | 35.0% | |
| TTTGTTACCCCATTCGTTAA+CGG | + | chr4.1:14471915-14471934 | None:intergenic | 35.0% | |
| ! | AACGGCAAAGATTTTCGATT+TGG | + | chr4.1:14472135-14472154 | None:intergenic | 35.0% |
| ! | AATAATATTTAGGGCCCGTT+TGG | - | chr4.1:14473246-14473265 | MS.gene09272:intron | 35.0% |
| ! | ACTTCTGAAGGATTTCAACA+AGG | - | chr4.1:14474692-14474711 | MS.gene09272:CDS | 35.0% |
| ! | CTTCTGAAGGATTTCAACAA+GGG | - | chr4.1:14474693-14474712 | MS.gene09272:CDS | 35.0% |
| ! | GAAAAGGACTTTGAGAAGAT+TGG | - | chr4.1:14474612-14474631 | MS.gene09272:CDS | 35.0% |
| ! | GAATGCAGTTTACGATTTTG+AGG | - | chr4.1:14473783-14473802 | MS.gene09272:intron | 35.0% |
| ! | TGCTCTTTTGCTTTGTGATA+TGG | - | chr4.1:14472531-14472550 | MS.gene09272:CDS | 35.0% |
| ! | TGTGATATGGCTCATTTTAG+TGG | - | chr4.1:14472544-14472563 | MS.gene09272:CDS | 35.0% |
| ! | TTTCTGGAAACTTAATCTCG+CGG | - | chr4.1:14474098-14474117 | MS.gene09272:intron | 35.0% |
| !! | GGCAAGATAAATTTTAGGTG+AGG | + | chr4.1:14474059-14474078 | None:intergenic | 35.0% |
| !!! | TTTCTTTTTCGATTAGGTCG+TGG | + | chr4.1:14471964-14471983 | None:intergenic | 35.0% |
| !!! | TTTTTTTTTTTGTGGTGGCC+GGG | - | chr4.1:14473088-14473107 | MS.gene09272:intron | 35.0% |
| AAAGCCCATTCATTTGTCTG+GGG | + | chr4.1:14473121-14473140 | None:intergenic | 40.0% | |
| AATCCCATAATCCGATCATG+AGG | + | chr4.1:14472265-14472284 | None:intergenic | 40.0% | |
| ACAACTCACAAGAGTTTGAG+GGG | - | chr4.1:14473697-14473716 | MS.gene09272:intron | 40.0% | |
| ATTCGTTACCACCGTAGTAA+CGG | + | chr4.1:14472105-14472124 | None:intergenic | 40.0% | |
| ATTTCCAATGGCAACTGCAT+TGG | + | chr4.1:14473938-14473957 | None:intergenic | 40.0% | |
| CAACAACTCACAAGAGTTTG+AGG | - | chr4.1:14473695-14473714 | MS.gene09272:intron | 40.0% | |
| CACAATGTCACAGTACTCAA+AGG | + | chr4.1:14473671-14473690 | None:intergenic | 40.0% | |
| CATACTCCCCTCTAATTCAA+CGG | + | chr4.1:14472894-14472913 | None:intergenic | 40.0% | |
| CATAGCCCAGTTTATAGGTA+AGG | + | chr4.1:14473184-14473203 | None:intergenic | 40.0% | |
| CATATCGATCCACAATCTTG+GGG | - | chr4.1:14472175-14472194 | MS.gene09272:intron | 40.0% | |
| CATGGTTACTATACTTCTGG+TGG | - | chr4.1:14472313-14472332 | MS.gene09272:intron | 40.0% | |
| CCATCTGGATCTGTTGTTAA+AGG | - | chr4.1:14472993-14473012 | MS.gene09272:CDS | 40.0% | |
| CCTTTAACAACAGATCCAGA+TGG | + | chr4.1:14472996-14473015 | None:intergenic | 40.0% | |
| CGGGCCATAGTATAACTATA+AGG | - | chr4.1:14473458-14473477 | MS.gene09272:intron | 40.0% | |
| CGTTTATAATCCCAATCCCT+AGG | + | chr4.1:14472484-14472503 | None:intergenic | 40.0% | |
| CTTGTTCCGTTGAATTAGAG+GGG | - | chr4.1:14472885-14472904 | MS.gene09272:CDS | 40.0% | |
| CTTTACCAGTCAATCCAAGA+GGG | + | chr4.1:14474032-14474051 | None:intergenic | 40.0% | |
| GATGTTCTTTGCAGGAAACA+AGG | - | chr4.1:14474124-14474143 | MS.gene09272:intron | 40.0% | |
| GGAATGATCTTCTACAGGAA+GGG | - | chr4.1:14473730-14473749 | MS.gene09272:intron | 40.0% | |
| GTCGTCGAATTCACCTTATA+CGG | + | chr4.1:14472379-14472398 | None:intergenic | 40.0% | |
| TAGTTATACTATGGCCCGTT+TGG | + | chr4.1:14473456-14473475 | None:intergenic | 40.0% | |
| TATAAGGTGAATTCGACGAC+TGG | - | chr4.1:14472379-14472398 | MS.gene09272:intron | 40.0% | |
| TCATGATCGGATTATGGGAT+TGG | - | chr4.1:14472264-14472283 | MS.gene09272:intron | 40.0% | |
| TCTTCTTCATTTGGTATGCC+TGG | - | chr4.1:14474768-14474787 | MS.gene09272:CDS | 40.0% | |
| TGAGAACCATCTTGTGTTGT+GGG | - | chr4.1:14473999-14474018 | MS.gene09272:intron | 40.0% | |
| TGGAATGATCTTCTACAGGA+AGG | - | chr4.1:14473729-14473748 | MS.gene09272:intron | 40.0% | |
| TGTACTTCATCTCAGATACC+AGG | + | chr4.1:14474797-14474816 | None:intergenic | 40.0% | |
| TTGTTACCCCATTCGTTAAC+GGG | + | chr4.1:14471914-14471933 | None:intergenic | 40.0% | |
| TTTATACCTGAGCAGCAACA+AGG | + | chr4.1:14472570-14472589 | None:intergenic | 40.0% | |
| ! | CTTTGAGAGTTTGCCGTATA+AGG | - | chr4.1:14472363-14472382 | MS.gene09272:intron | 40.0% |
| ! | GGTATCTGAGATGAAGTACA+AGG | - | chr4.1:14474797-14474816 | MS.gene09272:CDS | 40.0% |
| ! | TGTTGACTGTGATGTTACAG+AGG | + | chr4.1:14474166-14474185 | None:intergenic | 40.0% |
| ! | TTCTAGAGGCTTGGTTGAAA+AGG | - | chr4.1:14474596-14474615 | MS.gene09272:CDS | 40.0% |
| ! | TTTTACTCAAGGTAGCTGAC+TGG | - | chr4.1:14474543-14474562 | MS.gene09272:CDS | 40.0% |
| !! | TTAGCCACCTTGGTAATGTA+AGG | - | chr4.1:14473515-14473534 | MS.gene09272:intron | 40.0% |
| !!! | AGGAGAAAGCGTTGGATTTT+AGG | - | chr4.1:14472425-14472444 | MS.gene09272:intron | 40.0% |
| !!! | TTTTTTTTTTGTGGTGGCCG+GGG | - | chr4.1:14473089-14473108 | MS.gene09272:intron | 40.0% |
| ACGTTAACTCCCCAAGATTG+TGG | + | chr4.1:14472187-14472206 | None:intergenic | 45.0% | |
| ACTCACACTAGAGATCCAGA+AGG | - | chr4.1:14474659-14474678 | MS.gene09272:CDS | 45.0% | |
| AGGGATGTTGCTGATAAGTG+TGG | - | chr4.1:14472508-14472527 | MS.gene09272:CDS | 45.0% | |
| AGTTCTGTTAACAGGTGCTC+CGG | - | chr4.1:14474566-14474585 | MS.gene09272:CDS | 45.0% | |
| ATACTATGGCCCGTTTGGAT+TGG | + | chr4.1:14473451-14473470 | None:intergenic | 45.0% | |
| ATCATGAGGATTAAGCACGG+CGG | + | chr4.1:14472251-14472270 | None:intergenic | 45.0% | |
| ATCTCAGATACCAGGAAACC+AGG | + | chr4.1:14474789-14474808 | None:intergenic | 45.0% | |
| ATGGATCCCGTTAACGAATG+GGG | - | chr4.1:14471905-14471924 | MS.gene09272:CDS | 45.0% | |
| ATGGGATTGGATCTTCCTTC+AGG | - | chr4.1:14472277-14472296 | MS.gene09272:intron | 45.0% | |
| ATTGTGAGGACCACCTTGAA+GGG | + | chr4.1:14473836-14473855 | None:intergenic | 45.0% | |
| ATTTGGTATGCCTGGTTTCC+TGG | - | chr4.1:14474776-14474795 | MS.gene09272:CDS | 45.0% | |
| CCACCACAGATAATCAACCT+AGG | + | chr4.1:14472451-14472470 | None:intergenic | 45.0% | |
| CCGATCATGAGGATTAAGCA+CGG | + | chr4.1:14472254-14472273 | None:intergenic | 45.0% | |
| CCGTGCTTAATCCTCATGAT+CGG | - | chr4.1:14472251-14472270 | MS.gene09272:intron | 45.0% | |
| CCTCTTGGATTGACTGGTAA+AGG | - | chr4.1:14474030-14474049 | MS.gene09272:intron | 45.0% | |
| CCTTTACCAGTCAATCCAAG+AGG | + | chr4.1:14474033-14474052 | None:intergenic | 45.0% | |
| CGAACCCCAGACAAATGAAT+GGG | - | chr4.1:14473114-14473133 | MS.gene09272:intron | 45.0% | |
| CTGACTGGAGTTCTGTTAAC+AGG | - | chr4.1:14474558-14474577 | MS.gene09272:CDS | 45.0% | |
| CTGAGAACCATCTTGTGTTG+TGG | - | chr4.1:14473998-14474017 | MS.gene09272:intron | 45.0% | |
| CTGTTTCAAGGCAACAGCAA+GGG | + | chr4.1:14473872-14473891 | None:intergenic | 45.0% | |
| GAAGATCCCACAACACAAGA+TGG | + | chr4.1:14474008-14474027 | None:intergenic | 45.0% | |
| GAAGGATTTCAACAAGGGCT+TGG | - | chr4.1:14474698-14474717 | MS.gene09272:CDS | 45.0% | |
| GGAGCATGGAAAACTTCTGA+AGG | - | chr4.1:14474680-14474699 | MS.gene09272:CDS | 45.0% | |
| GGCATATGCCAAGCAAGTTA+AGG | - | chr4.1:14473912-14473931 | MS.gene09272:intron | 45.0% | |
| GTTAACGTTCAGCCTTACTC+TGG | - | chr4.1:14472199-14472218 | MS.gene09272:intron | 45.0% | |
| GTTCTTTGCAGGAAACAAGG+TGG | - | chr4.1:14474127-14474146 | MS.gene09272:intron | 45.0% | |
| TAGAAGATCATTCCAGCCCT+AGG | + | chr4.1:14473724-14473743 | None:intergenic | 45.0% | |
| TAGTGCTTACCCTAGGGATT+GGG | - | chr4.1:14472471-14472490 | MS.gene09272:intron | 45.0% | |
| TCAGGTGGACATTTGACTCA+TGG | - | chr4.1:14472295-14472314 | MS.gene09272:intron | 45.0% | |
| TCGAACCCCAGACAAATGAA+TGG | - | chr4.1:14473113-14473132 | MS.gene09272:intron | 45.0% | |
| TGAGTCAAATGTCCACCTGA+AGG | + | chr4.1:14472295-14472314 | None:intergenic | 45.0% | |
| TTCTGGTGGGAAGAAGATCT+CGG | - | chr4.1:14472327-14472346 | MS.gene09272:intron | 45.0% | |
| ! | AACCAAGCCTCTAGAAGTCA+TGG | + | chr4.1:14474592-14474611 | None:intergenic | 45.0% |
| ! | AAGGGATACAGTCTTGTCAC+TGG | - | chr4.1:14473970-14473989 | MS.gene09272:intron | 45.0% |
| ! | CATGCCTTCGGAGTATTTGT+TGG | + | chr4.1:14472074-14472093 | None:intergenic | 45.0% |
| ! | GAAGTTTTCCATGCTCCTTC+TGG | + | chr4.1:14474677-14474696 | None:intergenic | 45.0% |
| ! | GGCTTTATAAGCTCCCATCA+TGG | - | chr4.1:14473135-14473154 | MS.gene09272:intron | 45.0% |
| ! | TATTTAGGGCCCGTTTGGAT+TGG | - | chr4.1:14473251-14473270 | MS.gene09272:intron | 45.0% |
| !! | AGGCCTAGGTTGATTATCTG+TGG | - | chr4.1:14472445-14472464 | MS.gene09272:intron | 45.0% |
| !! | CCTAGGTTGATTATCTGTGG+TGG | - | chr4.1:14472448-14472467 | MS.gene09272:intron | 45.0% |
| !! | TGCATTGGCCTTAACTTGCT+TGG | + | chr4.1:14473923-14473942 | None:intergenic | 45.0% |
| !!! | AAGCGTTGGATTTTAGGCCT+AGG | - | chr4.1:14472431-14472450 | MS.gene09272:intron | 45.0% |
| !!! | TTTTTTTTTTTTTTTTTTTG+TGG | - | chr4.1:14473080-14473099 | MS.gene09272:intron | 5.0% |
| AAGGCCAATGCAGTTGCCAT+TGG | - | chr4.1:14473931-14473950 | MS.gene09272:intron | 50.0% | |
| ACAAGAGTTTGAGGGGTCCT+AGG | - | chr4.1:14473704-14473723 | MS.gene09272:intron | 50.0% | |
| ACCCACACATTGAGCCATGA+TGG | + | chr4.1:14473152-14473171 | None:intergenic | 50.0% | |
| AGGTGACATGGCCTGTTTCA+AGG | + | chr4.1:14473884-14473903 | None:intergenic | 50.0% | |
| ATGCCGGGAAACCGTTACTA+CGG | - | chr4.1:14472091-14472110 | MS.gene09272:CDS | 50.0% | |
| ATGCGATGAGTTCGATTCCG+CGG | + | chr4.1:14472000-14472019 | None:intergenic | 50.0% | |
| CAAGAGTTTGAGGGGTCCTA+GGG | - | chr4.1:14473705-14473724 | MS.gene09272:intron | 50.0% | |
| CCCACACATTGAGCCATGAT+GGG | + | chr4.1:14473151-14473170 | None:intergenic | 50.0% | |
| CCCATCATGGCTCAATGTGT+GGG | - | chr4.1:14473148-14473167 | MS.gene09272:intron | 50.0% | |
| CCTGTTTCAAGGCAACAGCA+AGG | + | chr4.1:14473873-14473892 | None:intergenic | 50.0% | |
| CGATTAGGTCGTGGATCTCT+GGG | + | chr4.1:14471955-14471974 | None:intergenic | 50.0% | |
| CGCGGTTTGATGTTCTTTGC+AGG | - | chr4.1:14474116-14474135 | MS.gene09272:intron | 50.0% | |
| CGGAATCGAACTCATCGCAT+CGG | - | chr4.1:14472000-14472019 | MS.gene09272:CDS | 50.0% | |
| CGTAAACTGCATTCTCAGGC+TGG | + | chr4.1:14473777-14473796 | None:intergenic | 50.0% | |
| CTAGAGATCCAGAAGGAGCA+TGG | - | chr4.1:14474666-14474685 | MS.gene09272:CDS | 50.0% | |
| CTAGTGTGAGTGTCACAGCA+CGG | + | chr4.1:14474650-14474669 | None:intergenic | 50.0% | |
| GAAAAACGTCGTCAATGCCG+CGG | - | chr4.1:14471980-14471999 | MS.gene09272:CDS | 50.0% | |
| GATTGTGAGGACCACCTTGA+AGG | + | chr4.1:14473837-14473856 | None:intergenic | 50.0% | |
| GCACCAATCTGGTGATTGTG+AGG | + | chr4.1:14473850-14473869 | None:intergenic | 50.0% | |
| GGACCTAAACCACCCAAGAA+GGG | - | chr4.1:14473751-14473770 | MS.gene09272:intron | 50.0% | |
| GGATTGGATCTTCCTTCAGG+TGG | - | chr4.1:14472280-14472299 | MS.gene09272:intron | 50.0% | |
| GGATTTCAACAAGGGCTTGG+TGG | - | chr4.1:14474701-14474720 | MS.gene09272:CDS | 50.0% | |
| GGGCTGGAATGATCTTCTAC+AGG | - | chr4.1:14473725-14473744 | MS.gene09272:intron | 50.0% | |
| GGTCCTCACAATCACCAGAT+TGG | - | chr4.1:14473844-14473863 | MS.gene09272:intron | 50.0% | |
| GTAGTGCTTACCCTAGGGAT+TGG | - | chr4.1:14472470-14472489 | MS.gene09272:intron | 50.0% | |
| GTGTAAGCAGCGAAATTCGC+CGG | + | chr4.1:14472229-14472248 | None:intergenic | 50.0% | |
| TCCCATCATGGCTCAATGTG+TGG | - | chr4.1:14473147-14473166 | MS.gene09272:intron | 50.0% | |
| TCGATTAGGTCGTGGATCTC+TGG | + | chr4.1:14471956-14471975 | None:intergenic | 50.0% | |
| TGAAACAGGCCATGTCACCT+GGG | - | chr4.1:14473884-14473903 | MS.gene09272:intron | 50.0% | |
| TTACCAACTCGTACTCCTCC+TGG | + | chr4.1:14474224-14474243 | None:intergenic | 50.0% | |
| TTGAAACAGGCCATGTCACC+TGG | - | chr4.1:14473883-14473902 | MS.gene09272:intron | 50.0% | |
| TTGGCATATGCCTTGAACCC+AGG | + | chr4.1:14473904-14473923 | None:intergenic | 50.0% | |
| ! | AAATACTCCGAAGGCATGCC+GGG | - | chr4.1:14472076-14472095 | MS.gene09272:CDS | 50.0% |
| ! | AAGCCTCTAGAAGTCATGGC+CGG | + | chr4.1:14474588-14474607 | None:intergenic | 50.0% |
| ! | AAGCTTGAAGAGCGCGTGAA+CGG | + | chr4.1:14472153-14472172 | None:intergenic | 50.0% |
| ! | CAAATACTCCGAAGGCATGC+CGG | - | chr4.1:14472075-14472094 | MS.gene09272:CDS | 50.0% |
| ! | GCAGTTTTCCCTTCCCTTCA+AGG | - | chr4.1:14473820-14473839 | MS.gene09272:intron | 50.0% |
| ! | GGATACAGTCTTGTCACTGG+TGG | - | chr4.1:14473973-14473992 | MS.gene09272:intron | 50.0% |
| ! | GTTTTCCCTTCCCTTCAAGG+TGG | - | chr4.1:14473823-14473842 | MS.gene09272:intron | 50.0% |
| ! | TAGGTTGGAGGAGAAAGCGT+TGG | - | chr4.1:14472417-14472436 | MS.gene09272:intron | 50.0% |
| ! | TCAGCCTTACTCTGGTTCAC+CGG | - | chr4.1:14472207-14472226 | MS.gene09272:intron | 50.0% |
| ! | TGGTGGTAGTGCTTACCCTA+GGG | - | chr4.1:14472465-14472484 | MS.gene09272:intron | 50.0% |
| ! | TTTTGGCGATAGCAGTGCCT+TGG | - | chr4.1:14474196-14474215 | MS.gene09272:CDS | 50.0% |
| !! | CCTTGCTGTTGCCTTGAAAC+AGG | - | chr4.1:14473870-14473889 | MS.gene09272:intron | 50.0% |
| CCACCGTAGTAACGGTTTCC+CGG | + | chr4.1:14472097-14472116 | None:intergenic | 55.0% | |
| CTTCGCCCTCTTGGATTGAC+TGG | - | chr4.1:14474024-14474043 | MS.gene09272:intron | 55.0% | |
| GAGGACCACCTTGAAGGGAA+GGG | + | chr4.1:14473831-14473850 | None:intergenic | 55.0% | |
| GGGACCTAAACCACCCAAGA+AGG | - | chr4.1:14473750-14473769 | MS.gene09272:intron | 55.0% | |
| TGAGGACCACCTTGAAGGGA+AGG | + | chr4.1:14473832-14473851 | None:intergenic | 55.0% | |
| TGAGTGTCACAGCACGGTGA+AGG | + | chr4.1:14474644-14474663 | None:intergenic | 55.0% | |
| TGCCTTGAACCCAGGTGACA+TGG | + | chr4.1:14473896-14473915 | None:intergenic | 55.0% | |
| TGGCCCTTCTTGGGTGGTTT+AGG | + | chr4.1:14473757-14473776 | None:intergenic | 55.0% | |
| TTCGCCGGTGAACCAGAGTA+AGG | + | chr4.1:14472214-14472233 | None:intergenic | 55.0% | |
| TTCGCCGTCATCGAAGCTCT+CGG | - | chr4.1:14472037-14472056 | MS.gene09272:CDS | 55.0% | |
| TTGTGGGATCTTCGCCCTCT+TGG | - | chr4.1:14474015-14474034 | MS.gene09272:intron | 55.0% | |
| ! | ATTCTCAGGCTGGCCCTTCT+TGG | + | chr4.1:14473767-14473786 | None:intergenic | 55.0% |
| ! | GGCCATGACTTCTAGAGGCT+TGG | - | chr4.1:14474587-14474606 | MS.gene09272:CDS | 55.0% |
| ! | GTGGTGGTAGTGCTTACCCT+AGG | - | chr4.1:14472464-14472483 | MS.gene09272:intron | 55.0% |
| ! | TTCTCAGGCTGGCCCTTCTT+GGG | + | chr4.1:14473766-14473785 | None:intergenic | 55.0% |
| ! | TTTGTCTGGGGTTCGAACCC+CGG | + | chr4.1:14473109-14473128 | None:intergenic | 55.0% |
| !! | AATGTCGGGGGCACTGGTTA+AGG | + | chr4.1:14472781-14472800 | None:intergenic | 55.0% |
| !! | CAACAGCAAGGGCACCAATC+TGG | + | chr4.1:14473861-14473880 | None:intergenic | 55.0% |
| !! | CAAGGGCTTGGTGGACAACA+AGG | - | chr4.1:14474710-14474729 | MS.gene09272:CDS | 55.0% |
| !! | TAGTGGCCTTGTTGCTGCTC+AGG | - | chr4.1:14472561-14472580 | MS.gene09272:CDS | 55.0% |
| ACGGTTTCCCGGCATGCCTT+CGG | + | chr4.1:14472086-14472105 | None:intergenic | 60.0% | |
| AGTTTGAGGGGTCCTAGGGC+TGG | - | chr4.1:14473709-14473728 | MS.gene09272:intron | 60.0% | |
| CCGGGAAACCGTTACTACGG+TGG | - | chr4.1:14472094-14472113 | MS.gene09272:CDS | 60.0% | |
| GATAGCAGTGCCTTGGCTCC+AGG | - | chr4.1:14474203-14474222 | MS.gene09272:CDS | 60.0% | |
| GCTCCGGCCATGACTTCTAG+AGG | - | chr4.1:14474582-14474601 | MS.gene09272:CDS | 60.0% | |
| GCTGCCGAGAGCTTCGATGA+CGG | + | chr4.1:14472044-14472063 | None:intergenic | 60.0% | |
| GGCCATGTCACCTGGGTTCA+AGG | - | chr4.1:14473891-14473910 | MS.gene09272:intron | 60.0% | |
| GTCGTGGATCTCTGGGTCGA+CGG | + | chr4.1:14471948-14471967 | None:intergenic | 60.0% | |
| TCGTACTCCTCCTGGAGCCA+AGG | + | chr4.1:14474216-14474235 | None:intergenic | 60.0% | |
| TCTGGGTCGACGGTTACGAG+TGG | + | chr4.1:14471938-14471957 | None:intergenic | 60.0% | |
| ! | AAGGGAAATGTCGGGGGCAC+TGG | + | chr4.1:14472787-14472806 | None:intergenic | 60.0% |
| ! | GAGAGCTTCGATGACGGCGA+AGG | + | chr4.1:14472038-14472057 | None:intergenic | 60.0% |
| ! | GCTCCAGGAGGAGTACGAGT+TGG | - | chr4.1:14474218-14474237 | MS.gene09272:CDS | 60.0% |
| AGCAGTGCCTTGGCTCCAGG+AGG | - | chr4.1:14474206-14474225 | MS.gene09272:CDS | 65.0% | |
| ! | TCAGGCTGGCCCTTCTTGGG+TGG | + | chr4.1:14473763-14473782 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 14471905 | 14474824 | 14471905 | ID=MS.gene09272 |
| chr4.1 | mRNA | 14471905 | 14474824 | 14471905 | ID=MS.gene09272.t1;Parent=MS.gene09272 |
| chr4.1 | exon | 14474147 | 14474824 | 14474147 | ID=MS.gene09272.t1.exon1;Parent=MS.gene09272.t1 |
| chr4.1 | CDS | 14474147 | 14474824 | 14474147 | ID=cds.MS.gene09272.t1;Parent=MS.gene09272.t1 |
| chr4.1 | exon | 14472684 | 14473074 | 14472684 | ID=MS.gene09272.t1.exon2;Parent=MS.gene09272.t1 |
| chr4.1 | CDS | 14472684 | 14473074 | 14472684 | ID=cds.MS.gene09272.t1;Parent=MS.gene09272.t1 |
| chr4.1 | exon | 14472490 | 14472591 | 14472490 | ID=MS.gene09272.t1.exon3;Parent=MS.gene09272.t1 |
| chr4.1 | CDS | 14472490 | 14472591 | 14472490 | ID=cds.MS.gene09272.t1;Parent=MS.gene09272.t1 |
| chr4.1 | exon | 14471905 | 14472149 | 14471905 | ID=MS.gene09272.t1.exon4;Parent=MS.gene09272.t1 |
| chr4.1 | CDS | 14471905 | 14472149 | 14471905 | ID=cds.MS.gene09272.t1;Parent=MS.gene09272.t1 |
| Gene Sequence |
| Protein sequence |
