Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09466.t1 | KEH26114.1 | 89.4 | 649 | 55 | 3 | 1 | 648 | 1 | 636 | 0.00E+00 | 1127.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09466.t1 | Q5UNY4 | 33.9 | 372 | 210 | 9 | 259 | 611 | 135 | 489 | 3.2e-52 | 208.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09466.t1 | A0A072U8L0 | 89.4 | 649 | 55 | 3 | 1 | 648 | 1 | 636 | 0.0e+00 | 1127.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052447 | MS.gene09466 | 0.808896 | 2.47E-50 | -1.69E-46 |
| MS.gene05531 | MS.gene09466 | 0.810877 | 9.26E-51 | -1.69E-46 |
| MS.gene058294 | MS.gene09466 | 0.801703 | 7.94E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09466.t1 | MTR_6g445440 | 90.293 | 649 | 49 | 3 | 1 | 648 | 1 | 636 | 0.0 | 1184 |
| MS.gene09466.t1 | MTR_5g045160 | 81.213 | 676 | 87 | 4 | 1 | 648 | 1 | 664 | 0.0 | 1086 |
| MS.gene09466.t1 | MTR_3g103410 | 67.917 | 720 | 143 | 6 | 2 | 648 | 3 | 707 | 0.0 | 959 |
| MS.gene09466.t1 | MTR_5g045130 | 79.804 | 510 | 74 | 3 | 156 | 648 | 2 | 499 | 0.0 | 814 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09466.t1 | AT5G13210 | 57.164 | 691 | 235 | 8 | 1 | 648 | 1 | 673 | 0.0 | 787 |
| MS.gene09466.t1 | AT5G43400 | 55.800 | 681 | 242 | 13 | 1 | 648 | 1 | 655 | 0.0 | 746 |
| MS.gene09466.t1 | AT5G43390 | 55.178 | 676 | 237 | 10 | 2 | 648 | 5 | 643 | 0.0 | 720 |
| MS.gene09466.t1 | AT3G24780 | 58.961 | 597 | 196 | 5 | 54 | 601 | 107 | 703 | 0.0 | 711 |
Find 211 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATCTTCTGAAATTGTTCT+TGG | 0.227687 | 6.4:+24054305 | MS.gene09466:CDS |
| GCCTCAGCTTCATGTGATTA+AGG | 0.231274 | 6.4:+24053942 | MS.gene09466:CDS |
| GTTTGAGCAGCAGTGGGGTT+AGG | 0.249243 | 6.4:-24052557 | None:intergenic |
| GGGGTTTGATTCCTTATAAT+AGG | 0.280239 | 6.4:+24053557 | MS.gene09466:CDS |
| AGTTGCCTGAGGTGTTTATT+GGG | 0.305202 | 6.4:+24053524 | MS.gene09466:CDS |
| TGAGGGTGGTGAGTGGGTTG+TGG | 0.306052 | 6.4:-24052799 | None:intergenic |
| AAATCAGTCTTGCTGCTAAA+TGG | 0.307004 | 6.4:+24053332 | MS.gene09466:CDS |
| ATATGCGATCAAACACCTTC+TGG | 0.312936 | 6.4:-24054029 | None:intergenic |
| CTTGCATTGTGTGATGTGTC+TGG | 0.319947 | 6.4:+24053814 | MS.gene09466:CDS |
| GAGTTGCCTGAGGTGTTTAT+TGG | 0.331704 | 6.4:+24053523 | MS.gene09466:CDS |
| GCCTTCTTTATCGGACTTGC+CGG | 0.332940 | 6.4:-24052855 | None:intergenic |
| GGGTTTGATTCCTTATAATA+GGG | 0.341420 | 6.4:+24053558 | MS.gene09466:CDS |
| GAGGGTGGTGAGTGGGTTGT+GGG | 0.346696 | 6.4:-24052798 | None:intergenic |
| CACGAACCCTATAAGCATAA+TGG | 0.352201 | 6.4:-24053456 | None:intergenic |
| ATCGGTGGGTTTCGGTTACT+TGG | 0.353452 | 6.4:-24052650 | None:intergenic |
| GTTTGTGAGGTACATGGATT+GGG | 0.355868 | 6.4:+24053990 | MS.gene09466:CDS |
| AGGAGGCCCATTATGCTTAT+AGG | 0.358311 | 6.4:+24053449 | MS.gene09466:CDS |
| GGCATAGAAGCCTTCTTTAT+CGG | 0.359961 | 6.4:-24052864 | None:intergenic |
| GCTTCTATGCCGCCGCTCTC+TGG | 0.367660 | 6.4:+24052876 | MS.gene09466:CDS |
| GTCTGTGGCATTGGGATTGT+TGG | 0.368352 | 6.4:+24053864 | MS.gene09466:CDS |
| GGAGGCCCATTATGCTTATA+GGG | 0.372018 | 6.4:+24053450 | MS.gene09466:CDS |
| ACAGAAGCAACCCTATTATA+AGG | 0.372370 | 6.4:-24053568 | None:intergenic |
| TGAACCCCATCGGTGGGTTT+CGG | 0.374776 | 6.4:-24052658 | None:intergenic |
| TTTGAGCAGCAGTGGGGTTA+GGG | 0.381315 | 6.4:-24052556 | None:intergenic |
| TGTTTATTGGGGCTAATCAA+TGG | 0.383519 | 6.4:+24053536 | MS.gene09466:CDS |
| GCAGCTTCCATGGCTTCTAC+AGG | 0.387857 | 6.4:-24054384 | None:intergenic |
| AGAAACTGCTCACGCTTTGA+AGG | 0.390323 | 6.4:+24053162 | MS.gene09466:CDS |
| GTTGATGATTTGCTCAAGAA+AGG | 0.391276 | 6.4:+24053775 | MS.gene09466:CDS |
| GTTTATTGGGGCTAATCAAT+GGG | 0.395888 | 6.4:+24053537 | MS.gene09466:CDS |
| GCCATGGAAGCTGCCATCGC+TGG | 0.399741 | 6.4:+24054393 | MS.gene09466:CDS |
| GAAGGTGTTTGATCGCATAT+TGG | 0.405938 | 6.4:+24054032 | MS.gene09466:CDS |
| CTCTTTACTCTTCCTTTGAT+CGG | 0.407203 | 6.4:+24053362 | MS.gene09466:CDS |
| CGATGTCTTCGTCGATCAAA+TGG | 0.409065 | 6.4:+24052607 | MS.gene09466:CDS |
| TATGGAGGTGTCTGTGGCAT+TGG | 0.412101 | 6.4:+24053855 | MS.gene09466:CDS |
| CACAAGTAGTTTCTGATACT+CGG | 0.418269 | 6.4:-24054418 | None:intergenic |
| GAAATCGAGGCATGGGTTAC+CGG | 0.418881 | 6.4:-24052711 | None:intergenic |
| CTTTCTGAGTGGATGGCACC+GGG | 0.421088 | 6.4:-24054254 | None:intergenic |
| GAGGTTTGAGAAGTACTTGC+AGG | 0.422516 | 6.4:+24053636 | MS.gene09466:CDS |
| CCTCAGCTTCATGTGATTAA+GGG | 0.424666 | 6.4:+24053943 | MS.gene09466:CDS |
| ACGAACCCTATAAGCATAAT+GGG | 0.425802 | 6.4:-24053455 | None:intergenic |
| TTATAATAGGGTTGCTTCTG+TGG | 0.427444 | 6.4:+24053570 | MS.gene09466:CDS |
| CTCCGTGGTGTTCGTGGTAC+CGG | 0.428319 | 6.4:+24052836 | MS.gene09466:CDS |
| AGTGTTTCAGAGGGAGTATC+GGG | 0.430024 | 6.4:-24052749 | None:intergenic |
| GATGTGTCTGGGAGTATGTA+TGG | 0.430135 | 6.4:+24053826 | MS.gene09466:CDS |
| ATAGACTTTACAATCTTATG+AGG | 0.432916 | 6.4:-24053703 | None:intergenic |
| AAACGTTGGTGACATGTTCT+TGG | 0.439869 | 6.4:-24052681 | None:intergenic |
| ACAAGTAGTTTCTGATACTC+GGG | 0.441120 | 6.4:-24054417 | None:intergenic |
| GCCAGCGATGGCAGCTTCCA+TGG | 0.443302 | 6.4:-24054394 | None:intergenic |
| GTTCCTTCATTCGCTGACTT+TGG | 0.452337 | 6.4:+24052935 | MS.gene09466:CDS |
| ATGAAGGAACATTGGTAGCT+AGG | 0.454513 | 6.4:-24052922 | None:intergenic |
| GATTTGAAAGTGTAGATCTC+AGG | 0.460293 | 6.4:-24052530 | None:intergenic |
| TGTAACCTCCGTGGTGTTCG+TGG | 0.460467 | 6.4:+24052830 | MS.gene09466:CDS |
| ATGGAGGTGTCTGTGGCATT+GGG | 0.464850 | 6.4:+24053856 | MS.gene09466:CDS |
| ACTAGGAAGTATAGTGAGAA+AGG | 0.468720 | 6.4:+24054174 | MS.gene09466:CDS |
| CCTTTCTGAGTGGATGGCAC+CGG | 0.470831 | 6.4:-24054255 | None:intergenic |
| ATAGGGTTCGTGATCGTTTG+AGG | 0.471872 | 6.4:+24053467 | MS.gene09466:CDS |
| GGTTTGTGAGGTACATGGAT+TGG | 0.479582 | 6.4:+24053989 | MS.gene09466:CDS |
| CCTAGTGATAGCTTGGTAAT+CGG | 0.480896 | 6.4:-24054157 | None:intergenic |
| AAAGGAGTGGCGCTGGTAAG+TGG | 0.484002 | 6.4:+24054273 | MS.gene09466:CDS |
| AGGAGGATCAGATGATTAAG+AGG | 0.485373 | 6.4:+24054079 | MS.gene09466:CDS |
| TACTTGCAGGATGTGAAGGC+AGG | 0.488941 | 6.4:+24053649 | MS.gene09466:CDS |
| AGCGGTGGTTTGAGCAGCAG+TGG | 0.492573 | 6.4:-24052564 | None:intergenic |
| TGAAGGAACATTGGTAGCTA+GGG | 0.493790 | 6.4:-24052921 | None:intergenic |
| GACAAGGTTTGTGAGGTACA+TGG | 0.496759 | 6.4:+24053984 | MS.gene09466:CDS |
| GTAATCACCTTCCCTTTCCA+TGG | 0.500702 | 6.4:-24053907 | None:intergenic |
| TAGTGTTTCAGAGGGAGTAT+CGG | 0.503351 | 6.4:-24052750 | None:intergenic |
| GCGGTGGTTTGAGCAGCAGT+GGG | 0.503429 | 6.4:-24052563 | None:intergenic |
| AAGTATAGTGAGAAAGGGTA+TGG | 0.504966 | 6.4:+24054180 | MS.gene09466:CDS |
| TGCCAAGAGGATCTTCCCTC+AGG | 0.506967 | 6.4:+24053408 | MS.gene09466:CDS |
| ATCCACGATGGCAGCTTCCA+TGG | 0.509446 | 6.4:-24054343 | None:intergenic |
| GTACCTCACAAACCTTGTCT+TGG | 0.510658 | 6.4:-24053980 | None:intergenic |
| GTATCAGAAACTACTTGTGC+TGG | 0.511739 | 6.4:+24054422 | MS.gene09466:CDS |
| TAGGGTTGCTTCTGTGGCCA+TGG | 0.513030 | 6.4:+24053576 | MS.gene09466:CDS |
| CTGATACTCGGGGCCAGCGA+TGG | 0.513732 | 6.4:-24054406 | None:intergenic |
| ATATTGGATGTTGCTGTCAA+TGG | 0.517020 | 6.4:+24054048 | MS.gene09466:CDS |
| GGAGGTTACAGACGAGTTTG+AGG | 0.518435 | 6.4:-24052817 | None:intergenic |
| TTCTTGGTGAACCCCATCGG+TGG | 0.519388 | 6.4:-24052665 | None:intergenic |
| CAGCTTCCATGGCTTCTACA+GGG | 0.521562 | 6.4:-24054383 | None:intergenic |
| TATACTTCCTAGTGATAGCT+TGG | 0.523300 | 6.4:-24054164 | None:intergenic |
| CACTCAGAAAGGAGTGGCGC+TGG | 0.524221 | 6.4:+24054266 | MS.gene09466:CDS |
| GAAGACATCGTTGGTTGTTG+TGG | 0.526907 | 6.4:-24052594 | None:intergenic |
| GAGTATGTATGGGACCCCTA+TGG | 0.529151 | 6.4:+24053837 | MS.gene09466:CDS |
| TAACCAAAGTCAGCGAATGA+AGG | 0.530880 | 6.4:-24052938 | None:intergenic |
| TTGCATTGTGTGATGTGTCT+GGG | 0.531023 | 6.4:+24053815 | MS.gene09466:CDS |
| GCCACTCCTTTCTGAGTGGA+TGG | 0.533051 | 6.4:-24054261 | None:intergenic |
| AATGCCACAGACACCTCCAT+AGG | 0.534471 | 6.4:-24053853 | None:intergenic |
| GAGGTTACAGACGAGTTTGA+GGG | 0.536437 | 6.4:-24052816 | None:intergenic |
| TGACGTCCTTGTCCTTGTTG+TGG | 0.536865 | 6.4:-24053093 | None:intergenic |
| TTTGTGAGGTACATGGATTG+GGG | 0.540048 | 6.4:+24053991 | MS.gene09466:CDS |
| CTTCAGAACCTTCGAGAAGA+CGG | 0.540737 | 6.4:-24052988 | None:intergenic |
| TATTGGATGTTGCTGTCAAT+GGG | 0.541577 | 6.4:+24054049 | MS.gene09466:CDS |
| GGAATATGAAGGTGTGGAGG+AGG | 0.542051 | 6.4:+24053432 | MS.gene09466:CDS |
| ATCAAAGGAAGAGTAAAGAG+AGG | 0.546326 | 6.4:-24053359 | None:intergenic |
| CTCAGCTTCATGTGATTAAG+GGG | 0.546670 | 6.4:+24053944 | MS.gene09466:CDS |
| GAAGACGGTAGAGGATCTCA+AGG | 0.549041 | 6.4:-24052973 | None:intergenic |
| GACATCGTTGGTTGTTGTGG+TGG | 0.552444 | 6.4:-24052591 | None:intergenic |
| TTGGAATCTGAGAGATTCGA+AGG | 0.552941 | 6.4:+24054227 | MS.gene09466:CDS |
| ATGCCACAGACACCTCCATA+GGG | 0.553300 | 6.4:-24053852 | None:intergenic |
| TGAGCGAGGAACCATGGAAA+GGG | 0.553944 | 6.4:+24053896 | MS.gene09466:CDS |
| CCGATTACCAAGCTATCACT+AGG | 0.554285 | 6.4:+24054157 | MS.gene09466:CDS |
| CTTCTCCTTATAAAACTCCA+TGG | 0.554710 | 6.4:-24053593 | None:intergenic |
| TGTAGATCTCAGGTGGGCCG+AGG | 0.555660 | 6.4:-24052520 | None:intergenic |
| GATGAGAGATACAATCATGA+AGG | 0.558066 | 6.4:-24053252 | None:intergenic |
| AACCTTCGAGAAGACGGTAG+AGG | 0.559476 | 6.4:-24052982 | None:intergenic |
| CTAGGAAGTATAGTGAGAAA+GGG | 0.560588 | 6.4:+24054175 | MS.gene09466:CDS |
| GGAAGAAGAAATCGAGGCAT+GGG | 0.561430 | 6.4:-24052718 | None:intergenic |
| ACGCTTTGAAGGAAGAGAAG+AGG | 0.564003 | 6.4:+24053173 | MS.gene09466:CDS |
| ATGAAGCGTCTGCAAACTCG+TGG | 0.565076 | 6.4:+24054130 | MS.gene09466:CDS |
| TTGATCGACGAAGACATCGT+TGG | 0.568154 | 6.4:-24052603 | None:intergenic |
| GGAAGAGAAGAGGATTGCCT+TGG | 0.568272 | 6.4:+24053183 | MS.gene09466:CDS |
| CTGAATTGAGCGAGGAACCA+TGG | 0.568431 | 6.4:+24053890 | MS.gene09466:CDS |
| ATCCTCTACCGTCTTCTCGA+AGG | 0.571604 | 6.4:+24052980 | MS.gene09466:CDS |
| CCGGTGCCATCCACTCAGAA+AGG | 0.571959 | 6.4:+24054255 | MS.gene09466:CDS |
| TCTTGGTGAACCCCATCGGT+GGG | 0.572514 | 6.4:-24052664 | None:intergenic |
| AGAAAGAAGAGTGGGATCAA+AGG | 0.574330 | 6.4:+24053023 | MS.gene09466:CDS |
| GCAAAACGCAGAAAGAAGAG+TGG | 0.574417 | 6.4:+24053014 | MS.gene09466:CDS |
| TCACCAACGTTTCTCTCCAC+CGG | 0.574691 | 6.4:+24052692 | MS.gene09466:CDS |
| ACTTGGCAGAGAATTGAAGT+TGG | 0.577005 | 6.4:-24052633 | None:intergenic |
| AGGGAAGATCCTCTTGGCAA+TGG | 0.577084 | 6.4:-24053404 | None:intergenic |
| AAGGAGTGGCGCTGGTAAGT+GGG | 0.577776 | 6.4:+24054274 | MS.gene09466:CDS |
| ATCAACAAGCTTCTTAGCCA+AGG | 0.578079 | 6.4:-24053200 | None:intergenic |
| TGTTGTGGTGGTTTGAGCGG+TGG | 0.578281 | 6.4:-24052579 | None:intergenic |
| CGAGTTTGAGGGTGGTGAGT+GGG | 0.578494 | 6.4:-24052805 | None:intergenic |
| GCTGCCATCGTGGATAATGA+AGG | 0.578518 | 6.4:+24054351 | MS.gene09466:CDS |
| GGGAAGACTACTATTGCTGC+TGG | 0.579975 | 6.4:+24053670 | MS.gene09466:CDS |
| TGGAAGAAGAAATCGAGGCA+TGG | 0.580042 | 6.4:-24052719 | None:intergenic |
| TTTATTGGGGCTAATCAATG+GGG | 0.580998 | 6.4:+24053538 | MS.gene09466:CDS |
| CCCTTAATCACATGAAGCTG+AGG | 0.581364 | 6.4:-24053943 | None:intergenic |
| ATGGCCGCCGTCACTCTCCT+CGG | 0.582475 | 6.4:+24052503 | MS.gene09466:CDS |
| AGTAACCGAAACCCACCGAT+GGG | 0.582549 | 6.4:+24052653 | MS.gene09466:CDS |
| GAAGTACTTGCAGGATGTGA+AGG | 0.584561 | 6.4:+24053645 | MS.gene09466:CDS |
| GTTGCCTGAGGTGTTTATTG+GGG | 0.586855 | 6.4:+24053525 | MS.gene09466:CDS |
| CTCTCGACTAGTGTTTCAGA+GGG | 0.588023 | 6.4:-24052758 | None:intergenic |
| TCTAAGCCCTGTAGAAGCCA+TGG | 0.588934 | 6.4:+24054377 | MS.gene09466:CDS |
| GATCTTTGTATTTAGTGACA+TGG | 0.590188 | 6.4:+24054101 | MS.gene09466:CDS |
| CTCCTGAGGGAAGATCCTCT+TGG | 0.590218 | 6.4:-24053410 | None:intergenic |
| GGATAATGAAGTAGAAGCCA+TGG | 0.590462 | 6.4:+24054326 | MS.gene09466:CDS |
| TTGAAAGTGTAGATCTCAGG+TGG | 0.591426 | 6.4:-24052527 | None:intergenic |
| TTCCCTCAGGAGGAATATGA+AGG | 0.591428 | 6.4:+24053421 | MS.gene09466:CDS |
| AGGGAGTATCGGGGACAACA+TGG | 0.591667 | 6.4:-24052739 | None:intergenic |
| ACCGGCAAGTCCGATAAAGA+AGG | 0.593618 | 6.4:+24052854 | MS.gene09466:CDS |
| AACTCCAATGCTTTCCTCAA+CGG | 0.595728 | 6.4:-24053505 | None:intergenic |
| CAGAAGAGTTGACCGATCAA+AGG | 0.598646 | 6.4:-24053374 | None:intergenic |
| ATGTGTCTGGGAGTATGTAT+GGG | 0.600984 | 6.4:+24053827 | MS.gene09466:CDS |
| GAGAGATTCGAAGGCCACCC+CGG | 0.601822 | 6.4:+24054236 | MS.gene09466:CDS |
| GTCAGCGAATGAAGGAACAT+TGG | 0.602371 | 6.4:-24052930 | None:intergenic |
| GACCCCTATGGAGGTGTCTG+TGG | 0.603946 | 6.4:+24053849 | MS.gene09466:CDS |
| TTGAGCGAGGAACCATGGAA+AGG | 0.606122 | 6.4:+24053895 | MS.gene09466:CDS |
| AAGTAACCGAAACCCACCGA+TGG | 0.606390 | 6.4:+24052652 | MS.gene09466:CDS |
| TTAGCCCCAATAAACACCTC+AGG | 0.606438 | 6.4:-24053529 | None:intergenic |
| TCAAAGGAAGAGTAAAGAGA+GGG | 0.606459 | 6.4:-24053358 | None:intergenic |
| GAGAAGTGGCTGAGTTGCAG+TGG | 0.607162 | 6.4:+24053743 | MS.gene09466:CDS |
| CAAAACGCAGAAAGAAGAGT+GGG | 0.608376 | 6.4:+24053015 | MS.gene09466:CDS |
| CAGCGCCACTCCTTTCTGAG+TGG | 0.610539 | 6.4:-24054265 | None:intergenic |
| CTGAGTGGATGGCACCGGGG+TGG | 0.616153 | 6.4:-24054250 | None:intergenic |
| ACTTGCAGGATGTGAAGGCA+GGG | 0.617639 | 6.4:+24053650 | MS.gene09466:CDS |
| CACCTTCATATTCCTCCTGA+GGG | 0.617845 | 6.4:-24053423 | None:intergenic |
| CGAGGAACCATGGAAAGGGA+AGG | 0.618032 | 6.4:+24053900 | MS.gene09466:CDS |
| TTGTGAGGTACATGGATTGG+GGG | 0.618091 | 6.4:+24053992 | MS.gene09466:CDS |
| ACGAGTTTGAGGGTGGTGAG+TGG | 0.619495 | 6.4:-24052806 | None:intergenic |
| TCTCTCGACTAGTGTTTCAG+AGG | 0.620545 | 6.4:-24052759 | None:intergenic |
| TGCTGTCAATGGGAATCTCA+AGG | 0.621591 | 6.4:+24054059 | MS.gene09466:CDS |
| AGGTGGGCCGAGGAGAGTGA+CGG | 0.622951 | 6.4:-24052510 | None:intergenic |
| TCGAGAGACTCAAACTAGCA+TGG | 0.624067 | 6.4:+24052774 | MS.gene09466:CDS |
| ACACCTTCATATTCCTCCTG+AGG | 0.626089 | 6.4:-24053424 | None:intergenic |
| GAATGGATATGGTGGAGAAG+TGG | 0.627847 | 6.4:+24053729 | MS.gene09466:CDS |
| CAAGGATAACAAAGGTGAAG+AGG | 0.630279 | 6.4:+24053114 | MS.gene09466:CDS |
| TCAGGAGGAATATGAAGGTG+TGG | 0.633554 | 6.4:+24053426 | MS.gene09466:CDS |
| GGTTGTTGTGGTGGTTTGAG+CGG | 0.633957 | 6.4:-24052582 | None:intergenic |
| ATGTTCTTGGTGAACCCCAT+CGG | 0.634747 | 6.4:-24052668 | None:intergenic |
| ATCACCTTCATTATCCACGA+TGG | 0.636682 | 6.4:-24054355 | None:intergenic |
| ATCGAGGCATGGGTTACCGG+TGG | 0.639063 | 6.4:-24052708 | None:intergenic |
| CAACAAGGACAAGGACGTCA+AGG | 0.639455 | 6.4:+24053096 | MS.gene09466:CDS |
| CAAGAGGATCTTCCCTCAGG+AGG | 0.641432 | 6.4:+24053411 | MS.gene09466:CDS |
| GGATAACAAAGGTGAAGAGG+TGG | 0.642767 | 6.4:+24053117 | MS.gene09466:CDS |
| TCGTTTGAGGAAAGATGTGT+TGG | 0.647723 | 6.4:+24053480 | MS.gene09466:CDS |
| GCCATCCACTCAGAAAGGAG+TGG | 0.648100 | 6.4:+24054260 | MS.gene09466:CDS |
| GGTGCCGTTGAGGAAAGCAT+TGG | 0.649237 | 6.4:+24053501 | MS.gene09466:CDS |
| AAGATGTGTTGGTGCCGTTG+AGG | 0.652976 | 6.4:+24053491 | MS.gene09466:CDS |
| GTTACAGACGAGTTTGAGGG+TGG | 0.654807 | 6.4:-24052813 | None:intergenic |
| TATGTATGGGACCCCTATGG+AGG | 0.655873 | 6.4:+24053840 | MS.gene09466:CDS |
| GTTCAACACTGATTTCCAGA+AGG | 0.657291 | 6.4:+24054014 | MS.gene09466:CDS |
| GGAGGAATATGAAGGTGTGG+AGG | 0.658988 | 6.4:+24053429 | MS.gene09466:CDS |
| CAACATGGAAGAAGAAATCG+AGG | 0.663409 | 6.4:-24052724 | None:intergenic |
| AAAACAACTACACCACAACA+AGG | 0.668775 | 6.4:+24053081 | MS.gene09466:CDS |
| TGAAGCGTCTGCAAACTCGT+GGG | 0.669122 | 6.4:+24054131 | MS.gene09466:CDS |
| TGTCTTCGTCGATCAAATGG+TGG | 0.670730 | 6.4:+24052610 | MS.gene09466:CDS |
| AGCCATGGAAGCTGCCATCG+TGG | 0.674026 | 6.4:+24054341 | MS.gene09466:CDS |
| ATGATCTGAAGTCCAAGACA+AGG | 0.676264 | 6.4:+24053968 | MS.gene09466:CDS |
| AGTCCAAGACAAGGTTTGTG+AGG | 0.679888 | 6.4:+24053977 | MS.gene09466:CDS |
| TGAAAGTGTAGATCTCAGGT+GGG | 0.687741 | 6.4:-24052526 | None:intergenic |
| ACTACACCACAACAAGGACA+AGG | 0.688429 | 6.4:+24053087 | MS.gene09466:CDS |
| TTACCGGTGGAGAGAAACGT+TGG | 0.690822 | 6.4:-24052695 | None:intergenic |
| CAAGTAGTTTCTGATACTCG+GGG | 0.691013 | 6.4:-24054416 | None:intergenic |
| TTCATGCAACCAGAGAGCGG+CGG | 0.692091 | 6.4:-24052885 | None:intergenic |
| TGGGCCGAGGAGAGTGACGG+CGG | 0.696579 | 6.4:-24052507 | None:intergenic |
| TGTGTGAGACCATTGCCAAG+AGG | 0.696638 | 6.4:+24053395 | MS.gene09466:CDS |
| TTTCTGAGTGGATGGCACCG+GGG | 0.698885 | 6.4:-24054253 | None:intergenic |
| TGCCACAGACACCTCCATAG+GGG | 0.703954 | 6.4:-24053851 | None:intergenic |
| CGGTGGTTTGAGCAGCAGTG+GGG | 0.704756 | 6.4:-24052562 | None:intergenic |
| GTTGGTGTCTGAATTGAGCG+AGG | 0.706312 | 6.4:+24053882 | MS.gene09466:CDS |
| TGCCGGTACCACGAACACCA+CGG | 0.707609 | 6.4:-24052838 | None:intergenic |
| TCAGCTTCATGTGATTAAGG+GGG | 0.707664 | 6.4:+24053945 | MS.gene09466:CDS |
| CAAAGGAAGAGTAAAGAGAG+GGG | 0.708316 | 6.4:-24053357 | None:intergenic |
| AAGGACGTCAAGGATAACAA+AGG | 0.709561 | 6.4:+24053106 | MS.gene09466:CDS |
| GAAAGCATTGGAGTTGCCTG+AGG | 0.710793 | 6.4:+24053513 | MS.gene09466:CDS |
| GTGTTTCAGAGGGAGTATCG+GGG | 0.730147 | 6.4:-24052748 | None:intergenic |
| AAACTCGTCTGTAACCTCCG+TGG | 0.731806 | 6.4:+24052821 | MS.gene09466:CDS |
| GTAACCGAAACCCACCGATG+GGG | 0.733760 | 6.4:+24052654 | MS.gene09466:CDS |
| TGTCAATGGGAATCTCAAGG+AGG | 0.770211 | 6.4:+24054062 | MS.gene09466:CDS |
| CGGTACCACGAACACCACGG+AGG | 0.805564 | 6.4:-24052835 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTGTAAAGTCTATTTTGAA+TGG | + | chr6.4:24053712-24053731 | MS.gene09466:CDS | 20.0% |
| ! | ATAGACTTTACAATCTTATG+AGG | - | chr6.4:24053706-24053725 | None:intergenic | 25.0% |
| !! | GGAAATTTTCATCAATATCA+AGG | + | chr6.4:24053044-24053063 | MS.gene09466:CDS | 25.0% |
| !!! | AAGTCTATTTTGAATGGATA+TGG | + | chr6.4:24053718-24053737 | MS.gene09466:CDS | 25.0% |
| !!! | ATCTCGAATTTTTGAAATCT+GGG | + | chr6.4:24053299-24053318 | MS.gene09466:CDS | 25.0% |
| AGATTCCAAAAAACTATCTG+AGG | - | chr6.4:24054216-24054235 | None:intergenic | 30.0% | |
| GATCTTTGTATTTAGTGACA+TGG | + | chr6.4:24054101-24054120 | MS.gene09466:CDS | 30.0% | |
| GGGTTTGATTCCTTATAATA+GGG | + | chr6.4:24053558-24053577 | MS.gene09466:CDS | 30.0% | |
| !! | GAATCTTCTGAAATTGTTCT+TGG | + | chr6.4:24054305-24054324 | MS.gene09466:CDS | 30.0% |
| !! | TCTATTTTGAATGGATATGG+TGG | + | chr6.4:24053721-24053740 | MS.gene09466:CDS | 30.0% |
| !! | TTTTGCTGATTGTTTGAAGA+AGG | + | chr6.4:24053276-24053295 | MS.gene09466:CDS | 30.0% |
| !!! | GATCTCGAATTTTTGAAATC+TGG | + | chr6.4:24053298-24053317 | MS.gene09466:CDS | 30.0% |
| AAAACAACTACACCACAACA+AGG | + | chr6.4:24053081-24053100 | MS.gene09466:CDS | 35.0% | |
| AAATCAGTCTTGCTGCTAAA+TGG | + | chr6.4:24053332-24053351 | MS.gene09466:CDS | 35.0% | |
| AAGTATAGTGAGAAAGGGTA+TGG | + | chr6.4:24054180-24054199 | MS.gene09466:CDS | 35.0% | |
| ACAAGTAGTTTCTGATACTC+GGG | - | chr6.4:24054420-24054439 | None:intergenic | 35.0% | |
| ACAGAAGCAACCCTATTATA+AGG | - | chr6.4:24053571-24053590 | None:intergenic | 35.0% | |
| ACGAACCCTATAAGCATAAT+GGG | - | chr6.4:24053458-24053477 | None:intergenic | 35.0% | |
| ATATTGGATGTTGCTGTCAA+TGG | + | chr6.4:24054048-24054067 | MS.gene09466:CDS | 35.0% | |
| ATCAAAGGAAGAGTAAAGAG+AGG | - | chr6.4:24053362-24053381 | None:intergenic | 35.0% | |
| CACAAGTAGTTTCTGATACT+CGG | - | chr6.4:24054421-24054440 | None:intergenic | 35.0% | |
| CTCTTTACTCTTCCTTTGAT+CGG | + | chr6.4:24053362-24053381 | MS.gene09466:CDS | 35.0% | |
| CTTCTCCTTATAAAACTCCA+TGG | - | chr6.4:24053596-24053615 | None:intergenic | 35.0% | |
| GATGAGAGATACAATCATGA+AGG | - | chr6.4:24053255-24053274 | None:intergenic | 35.0% | |
| GGGGTTTGATTCCTTATAAT+AGG | + | chr6.4:24053557-24053576 | MS.gene09466:CDS | 35.0% | |
| GTTTATTGGGGCTAATCAAT+GGG | + | chr6.4:24053537-24053556 | MS.gene09466:CDS | 35.0% | |
| TATACTTCCTAGTGATAGCT+TGG | - | chr6.4:24054167-24054186 | None:intergenic | 35.0% | |
| TATTGGATGTTGCTGTCAAT+GGG | + | chr6.4:24054049-24054068 | MS.gene09466:CDS | 35.0% | |
| TCAAAGGAAGAGTAAAGAGA+GGG | - | chr6.4:24053361-24053380 | None:intergenic | 35.0% | |
| TGTTTATTGGGGCTAATCAA+TGG | + | chr6.4:24053536-24053555 | MS.gene09466:CDS | 35.0% | |
| TTATAATAGGGTTGCTTCTG+TGG | + | chr6.4:24053570-24053589 | MS.gene09466:CDS | 35.0% | |
| TTTATTGGGGCTAATCAATG+GGG | + | chr6.4:24053538-24053557 | MS.gene09466:CDS | 35.0% | |
| ! | ACTAGGAAGTATAGTGAGAA+AGG | + | chr6.4:24054174-24054193 | MS.gene09466:CDS | 35.0% |
| ! | CTAGGAAGTATAGTGAGAAA+GGG | + | chr6.4:24054175-24054194 | MS.gene09466:CDS | 35.0% |
| ! | GATTTGAAAGTGTAGATCTC+AGG | - | chr6.4:24052533-24052552 | None:intergenic | 35.0% |
| !! | GTTGATGATTTGCTCAAGAA+AGG | + | chr6.4:24053775-24053794 | MS.gene09466:CDS | 35.0% |
| !!! | GAAGTTTTTGAAGCATGATG+AGG | + | chr6.4:24053612-24053631 | MS.gene09466:CDS | 35.0% |
| AACTCCAATGCTTTCCTCAA+CGG | - | chr6.4:24053508-24053527 | None:intergenic | 40.0% | |
| AAGGACGTCAAGGATAACAA+AGG | + | chr6.4:24053106-24053125 | MS.gene09466:CDS | 40.0% | |
| ACTTGGCAGAGAATTGAAGT+TGG | - | chr6.4:24052636-24052655 | None:intergenic | 40.0% | |
| AGAAAGAAGAGTGGGATCAA+AGG | + | chr6.4:24053023-24053042 | MS.gene09466:CDS | 40.0% | |
| AGGAGGATCAGATGATTAAG+AGG | + | chr6.4:24054079-24054098 | MS.gene09466:CDS | 40.0% | |
| ATATGCGATCAAACACCTTC+TGG | - | chr6.4:24054032-24054051 | None:intergenic | 40.0% | |
| ATCAACAAGCTTCTTAGCCA+AGG | - | chr6.4:24053203-24053222 | None:intergenic | 40.0% | |
| ATCACCTTCATTATCCACGA+TGG | - | chr6.4:24054358-24054377 | None:intergenic | 40.0% | |
| CAAAACGCAGAAAGAAGAGT+GGG | + | chr6.4:24053015-24053034 | MS.gene09466:CDS | 40.0% | |
| CAAAGGAAGAGTAAAGAGAG+GGG | - | chr6.4:24053360-24053379 | None:intergenic | 40.0% | |
| CAACATGGAAGAAGAAATCG+AGG | - | chr6.4:24052727-24052746 | None:intergenic | 40.0% | |
| CAAGGATAACAAAGGTGAAG+AGG | + | chr6.4:24053114-24053133 | MS.gene09466:CDS | 40.0% | |
| CAAGTAGTTTCTGATACTCG+GGG | - | chr6.4:24054419-24054438 | None:intergenic | 40.0% | |
| CACGAACCCTATAAGCATAA+TGG | - | chr6.4:24053459-24053478 | None:intergenic | 40.0% | |
| CCTCAGCTTCATGTGATTAA+GGG | + | chr6.4:24053943-24053962 | MS.gene09466:CDS | 40.0% | |
| CTCAGCTTCATGTGATTAAG+GGG | + | chr6.4:24053944-24053963 | MS.gene09466:CDS | 40.0% | |
| GGATAATGAAGTAGAAGCCA+TGG | + | chr6.4:24054326-24054345 | MS.gene09466:CDS | 40.0% | |
| GGCATAGAAGCCTTCTTTAT+CGG | - | chr6.4:24052867-24052886 | None:intergenic | 40.0% | |
| GTATCAGAAACTACTTGTGC+TGG | + | chr6.4:24054422-24054441 | MS.gene09466:CDS | 40.0% | |
| GTTTGTGAGGTACATGGATT+GGG | + | chr6.4:24053990-24054009 | MS.gene09466:CDS | 40.0% | |
| TAACCAAAGTCAGCGAATGA+AGG | - | chr6.4:24052941-24052960 | None:intergenic | 40.0% | |
| TCAGCTTCATGTGATTAAGG+GGG | + | chr6.4:24053945-24053964 | MS.gene09466:CDS | 40.0% | |
| TCGTTTGAGGAAAGATGTGT+TGG | + | chr6.4:24053480-24053499 | MS.gene09466:CDS | 40.0% | |
| TTGCATTGTGTGATGTGTCT+GGG | + | chr6.4:24053815-24053834 | MS.gene09466:CDS | 40.0% | |
| TTGGAATCTGAGAGATTCGA+AGG | + | chr6.4:24054227-24054246 | MS.gene09466:CDS | 40.0% | |
| ! | AGTTGCCTGAGGTGTTTATT+GGG | + | chr6.4:24053524-24053543 | MS.gene09466:CDS | 40.0% |
| ! | ATGAAGGAACATTGGTAGCT+AGG | - | chr6.4:24052925-24052944 | None:intergenic | 40.0% |
| ! | ATGATCTGAAGTCCAAGACA+AGG | + | chr6.4:24053968-24053987 | MS.gene09466:CDS | 40.0% |
| ! | ATGTGTCTGGGAGTATGTAT+GGG | + | chr6.4:24053827-24053846 | MS.gene09466:CDS | 40.0% |
| ! | ATTTTCATGCAACCAGAGAG+CGG | - | chr6.4:24052891-24052910 | None:intergenic | 40.0% |
| ! | CCTAGTGATAGCTTGGTAAT+CGG | - | chr6.4:24054160-24054179 | None:intergenic | 40.0% |
| ! | TAGTGTTTCAGAGGGAGTAT+CGG | - | chr6.4:24052753-24052772 | None:intergenic | 40.0% |
| ! | TGAAAGTGTAGATCTCAGGT+GGG | - | chr6.4:24052529-24052548 | None:intergenic | 40.0% |
| ! | TGAAGGAACATTGGTAGCTA+GGG | - | chr6.4:24052924-24052943 | None:intergenic | 40.0% |
| ! | TTGAAAGTGTAGATCTCAGG+TGG | - | chr6.4:24052530-24052549 | None:intergenic | 40.0% |
| ! | TTTGTGAGGTACATGGATTG+GGG | + | chr6.4:24053991-24054010 | MS.gene09466:CDS | 40.0% |
| !! | AAACGTTGGTGACATGTTCT+TGG | - | chr6.4:24052684-24052703 | None:intergenic | 40.0% |
| !! | ACATTGGTAGCTAGGGTTTT+TGG | - | chr6.4:24052917-24052936 | None:intergenic | 40.0% |
| !! | AGCAGCAAGACTGATTTTTC+TGG | - | chr6.4:24053329-24053348 | None:intergenic | 40.0% |
| !! | CATTGGTAGCTAGGGTTTTT+GGG | - | chr6.4:24052916-24052935 | None:intergenic | 40.0% |
| !! | GAAGGTGTTTGATCGCATAT+TGG | + | chr6.4:24054032-24054051 | MS.gene09466:CDS | 40.0% |
| !! | GCAGCAAGACTGATTTTTCT+GGG | - | chr6.4:24053328-24053347 | None:intergenic | 40.0% |
| !! | GTTCAACACTGATTTCCAGA+AGG | + | chr6.4:24054014-24054033 | MS.gene09466:CDS | 40.0% |
| !! | TGTGGCCATGGAGTTTTATA+AGG | + | chr6.4:24053588-24053607 | MS.gene09466:CDS | 40.0% |
| !!! | CTGTGCCTCAGATAGTTTTT+TGG | + | chr6.4:24054208-24054227 | MS.gene09466:CDS | 40.0% |
| !!! | TTTTGAAGCATGATGAGGAG+AGG | + | chr6.4:24053617-24053636 | MS.gene09466:CDS | 40.0% |
| ACACCTTCATATTCCTCCTG+AGG | - | chr6.4:24053427-24053446 | None:intergenic | 45.0% | |
| ACTACACCACAACAAGGACA+AGG | + | chr6.4:24053087-24053106 | MS.gene09466:CDS | 45.0% | |
| AGAAACTGCTCACGCTTTGA+AGG | + | chr6.4:24053162-24053181 | MS.gene09466:CDS | 45.0% | |
| AGGAGGCCCATTATGCTTAT+AGG | + | chr6.4:24053449-24053468 | MS.gene09466:CDS | 45.0% | |
| AGTCCAAGACAAGGTTTGTG+AGG | + | chr6.4:24053977-24053996 | MS.gene09466:CDS | 45.0% | |
| ATAGGGTTCGTGATCGTTTG+AGG | + | chr6.4:24053467-24053486 | MS.gene09466:CDS | 45.0% | |
| ATGTTCTTGGTGAACCCCAT+CGG | - | chr6.4:24052671-24052690 | None:intergenic | 45.0% | |
| CACCTTCATATTCCTCCTGA+GGG | - | chr6.4:24053426-24053445 | None:intergenic | 45.0% | |
| CAGAAGAGTTGACCGATCAA+AGG | - | chr6.4:24053377-24053396 | None:intergenic | 45.0% | |
| CCCTTAATCACATGAAGCTG+AGG | - | chr6.4:24053946-24053965 | None:intergenic | 45.0% | |
| CCGATTACCAAGCTATCACT+AGG | + | chr6.4:24054157-24054176 | MS.gene09466:CDS | 45.0% | |
| CGATGTCTTCGTCGATCAAA+TGG | + | chr6.4:24052607-24052626 | MS.gene09466:CDS | 45.0% | |
| CTCTCGACTAGTGTTTCAGA+GGG | - | chr6.4:24052761-24052780 | None:intergenic | 45.0% | |
| CTTCAGAACCTTCGAGAAGA+CGG | - | chr6.4:24052991-24053010 | None:intergenic | 45.0% | |
| CTTGCATTGTGTGATGTGTC+TGG | + | chr6.4:24053814-24053833 | MS.gene09466:CDS | 45.0% | |
| GACAAGGTTTGTGAGGTACA+TGG | + | chr6.4:24053984-24054003 | MS.gene09466:CDS | 45.0% | |
| GAGGTTACAGACGAGTTTGA+GGG | - | chr6.4:24052819-24052838 | None:intergenic | 45.0% | |
| GCAAAACGCAGAAAGAAGAG+TGG | + | chr6.4:24053014-24053033 | MS.gene09466:CDS | 45.0% | |
| GCCTCAGCTTCATGTGATTA+AGG | + | chr6.4:24053942-24053961 | MS.gene09466:CDS | 45.0% | |
| GGAAGAAGAAATCGAGGCAT+GGG | - | chr6.4:24052721-24052740 | None:intergenic | 45.0% | |
| GGAGGCCCATTATGCTTATA+GGG | + | chr6.4:24053450-24053469 | MS.gene09466:CDS | 45.0% | |
| GGATAACAAAGGTGAAGAGG+TGG | + | chr6.4:24053117-24053136 | MS.gene09466:CDS | 45.0% | |
| GGTTTGTGAGGTACATGGAT+TGG | + | chr6.4:24053989-24054008 | MS.gene09466:CDS | 45.0% | |
| GTAATCACCTTCCCTTTCCA+TGG | - | chr6.4:24053910-24053929 | None:intergenic | 45.0% | |
| GTACCTCACAAACCTTGTCT+TGG | - | chr6.4:24053983-24054002 | None:intergenic | 45.0% | |
| GTCAGCGAATGAAGGAACAT+TGG | - | chr6.4:24052933-24052952 | None:intergenic | 45.0% | |
| TCAGGAGGAATATGAAGGTG+TGG | + | chr6.4:24053426-24053445 | MS.gene09466:CDS | 45.0% | |
| TCGAGAGACTCAAACTAGCA+TGG | + | chr6.4:24052774-24052793 | MS.gene09466:CDS | 45.0% | |
| TCTCTCGACTAGTGTTTCAG+AGG | - | chr6.4:24052762-24052781 | None:intergenic | 45.0% | |
| TGCTGTCAATGGGAATCTCA+AGG | + | chr6.4:24054059-24054078 | MS.gene09466:CDS | 45.0% | |
| TGGAAGAAGAAATCGAGGCA+TGG | - | chr6.4:24052722-24052741 | None:intergenic | 45.0% | |
| TGTCAATGGGAATCTCAAGG+AGG | + | chr6.4:24054062-24054081 | MS.gene09466:CDS | 45.0% | |
| TGTCTTCGTCGATCAAATGG+TGG | + | chr6.4:24052610-24052629 | MS.gene09466:CDS | 45.0% | |
| TTAGCCCCAATAAACACCTC+AGG | - | chr6.4:24053532-24053551 | None:intergenic | 45.0% | |
| TTCCCTCAGGAGGAATATGA+AGG | + | chr6.4:24053421-24053440 | MS.gene09466:CDS | 45.0% | |
| TTGATCGACGAAGACATCGT+TGG | - | chr6.4:24052606-24052625 | None:intergenic | 45.0% | |
| ! | GAAGACATCGTTGGTTGTTG+TGG | - | chr6.4:24052597-24052616 | None:intergenic | 45.0% |
| ! | GAAGTACTTGCAGGATGTGA+AGG | + | chr6.4:24053645-24053664 | MS.gene09466:CDS | 45.0% |
| ! | GAATGGATATGGTGGAGAAG+TGG | + | chr6.4:24053729-24053748 | MS.gene09466:CDS | 45.0% |
| ! | GAGTTGCCTGAGGTGTTTAT+TGG | + | chr6.4:24053523-24053542 | MS.gene09466:CDS | 45.0% |
| ! | GATGTGTCTGGGAGTATGTA+TGG | + | chr6.4:24053826-24053845 | MS.gene09466:CDS | 45.0% |
| ! | GTTGCCTGAGGTGTTTATTG+GGG | + | chr6.4:24053525-24053544 | MS.gene09466:CDS | 45.0% |
| !! | ACGCTTTGAAGGAAGAGAAG+AGG | + | chr6.4:24053173-24053192 | MS.gene09466:CDS | 45.0% |
| !! | AGTGTTTCAGAGGGAGTATC+GGG | - | chr6.4:24052752-24052771 | None:intergenic | 45.0% |
| !! | GAGGTTTGAGAAGTACTTGC+AGG | + | chr6.4:24053636-24053655 | MS.gene09466:CDS | 45.0% |
| !! | GTTCCTTCATTCGCTGACTT+TGG | + | chr6.4:24052935-24052954 | MS.gene09466:CDS | 45.0% |
| !! | TTGTGAGGTACATGGATTGG+GGG | + | chr6.4:24053992-24054011 | MS.gene09466:CDS | 45.0% |
| AAACTCGTCTGTAACCTCCG+TGG | + | chr6.4:24052821-24052840 | MS.gene09466:CDS | 50.0% | |
| AACCTTCGAGAAGACGGTAG+AGG | - | chr6.4:24052985-24053004 | None:intergenic | 50.0% | |
| AAGTAACCGAAACCCACCGA+TGG | + | chr6.4:24052652-24052671 | MS.gene09466:CDS | 50.0% | |
| AATGCCACAGACACCTCCAT+AGG | - | chr6.4:24053856-24053875 | None:intergenic | 50.0% | |
| ACCGGCAAGTCCGATAAAGA+AGG | + | chr6.4:24052854-24052873 | MS.gene09466:CDS | 50.0% | |
| ACTTGCAGGATGTGAAGGCA+GGG | + | chr6.4:24053650-24053669 | MS.gene09466:CDS | 50.0% | |
| AGGGAAGATCCTCTTGGCAA+TGG | - | chr6.4:24053407-24053426 | None:intergenic | 50.0% | |
| AGTAACCGAAACCCACCGAT+GGG | + | chr6.4:24052653-24052672 | MS.gene09466:CDS | 50.0% | |
| ATCCTCTACCGTCTTCTCGA+AGG | + | chr6.4:24052980-24052999 | MS.gene09466:CDS | 50.0% | |
| ATGCCACAGACACCTCCATA+GGG | - | chr6.4:24053855-24053874 | None:intergenic | 50.0% | |
| CAACAAGGACAAGGACGTCA+AGG | + | chr6.4:24053096-24053115 | MS.gene09466:CDS | 50.0% | |
| CAGCTTCCATGGCTTCTACA+GGG | - | chr6.4:24054386-24054405 | None:intergenic | 50.0% | |
| CTGAATTGAGCGAGGAACCA+TGG | + | chr6.4:24053890-24053909 | MS.gene09466:CDS | 50.0% | |
| GAAGACGGTAGAGGATCTCA+AGG | - | chr6.4:24052976-24052995 | None:intergenic | 50.0% | |
| GAGTATGTATGGGACCCCTA+TGG | + | chr6.4:24053837-24053856 | MS.gene09466:CDS | 50.0% | |
| GCCTTCTTTATCGGACTTGC+CGG | - | chr6.4:24052858-24052877 | None:intergenic | 50.0% | |
| GCTGCCATCGTGGATAATGA+AGG | + | chr6.4:24054351-24054370 | MS.gene09466:CDS | 50.0% | |
| GGAAGAGAAGAGGATTGCCT+TGG | + | chr6.4:24053183-24053202 | MS.gene09466:CDS | 50.0% | |
| GGAGGTTACAGACGAGTTTG+AGG | - | chr6.4:24052820-24052839 | None:intergenic | 50.0% | |
| GGGAAGACTACTATTGCTGC+TGG | + | chr6.4:24053670-24053689 | MS.gene09466:CDS | 50.0% | |
| GGTTGTTGTGGTGGTTTGAG+CGG | - | chr6.4:24052585-24052604 | None:intergenic | 50.0% | |
| GTTACAGACGAGTTTGAGGG+TGG | - | chr6.4:24052816-24052835 | None:intergenic | 50.0% | |
| TACTTGCAGGATGTGAAGGC+AGG | + | chr6.4:24053649-24053668 | MS.gene09466:CDS | 50.0% | |
| TATGTATGGGACCCCTATGG+AGG | + | chr6.4:24053840-24053859 | MS.gene09466:CDS | 50.0% | |
| TCACCAACGTTTCTCTCCAC+CGG | + | chr6.4:24052692-24052711 | MS.gene09466:CDS | 50.0% | |
| TCTAAGCCCTGTAGAAGCCA+TGG | + | chr6.4:24054377-24054396 | MS.gene09466:CDS | 50.0% | |
| TGACGTCCTTGTCCTTGTTG+TGG | - | chr6.4:24053096-24053115 | None:intergenic | 50.0% | |
| TGAGCGAGGAACCATGGAAA+GGG | + | chr6.4:24053896-24053915 | MS.gene09466:CDS | 50.0% | |
| TGTGTGAGACCATTGCCAAG+AGG | + | chr6.4:24053395-24053414 | MS.gene09466:CDS | 50.0% | |
| TTACCGGTGGAGAGAAACGT+TGG | - | chr6.4:24052698-24052717 | None:intergenic | 50.0% | |
| TTGAGCGAGGAACCATGGAA+AGG | + | chr6.4:24053895-24053914 | MS.gene09466:CDS | 50.0% | |
| TTTGAGCAGCAGTGGGGTTA+GGG | - | chr6.4:24052559-24052578 | None:intergenic | 50.0% | |
| ! | ATCGGTGGGTTTCGGTTACT+TGG | - | chr6.4:24052653-24052672 | None:intergenic | 50.0% |
| ! | ATGAAGCGTCTGCAAACTCG+TGG | + | chr6.4:24054130-24054149 | MS.gene09466:CDS | 50.0% |
| ! | GAAATCGAGGCATGGGTTAC+CGG | - | chr6.4:24052714-24052733 | None:intergenic | 50.0% |
| ! | GACATCGTTGGTTGTTGTGG+TGG | - | chr6.4:24052594-24052613 | None:intergenic | 50.0% |
| ! | GGAATATGAAGGTGTGGAGG+AGG | + | chr6.4:24053432-24053451 | MS.gene09466:CDS | 50.0% |
| ! | GGAGGAATATGAAGGTGTGG+AGG | + | chr6.4:24053429-24053448 | MS.gene09466:CDS | 50.0% |
| ! | GTCTGTGGCATTGGGATTGT+TGG | + | chr6.4:24053864-24053883 | MS.gene09466:CDS | 50.0% |
| ! | GTTGGTGTCTGAATTGAGCG+AGG | + | chr6.4:24053882-24053901 | MS.gene09466:CDS | 50.0% |
| ! | TGAAGCGTCTGCAAACTCGT+GGG | + | chr6.4:24054131-24054150 | MS.gene09466:CDS | 50.0% |
| !! | AAGATGTGTTGGTGCCGTTG+AGG | + | chr6.4:24053491-24053510 | MS.gene09466:CDS | 50.0% |
| !! | ATGGAGGTGTCTGTGGCATT+GGG | + | chr6.4:24053856-24053875 | MS.gene09466:CDS | 50.0% |
| !! | GAAAGCATTGGAGTTGCCTG+AGG | + | chr6.4:24053513-24053532 | MS.gene09466:CDS | 50.0% |
| !! | GTGTTTCAGAGGGAGTATCG+GGG | - | chr6.4:24052751-24052770 | None:intergenic | 50.0% |
| !! | TATGGAGGTGTCTGTGGCAT+TGG | + | chr6.4:24053855-24053874 | MS.gene09466:CDS | 50.0% |
| ACGAGTTTGAGGGTGGTGAG+TGG | - | chr6.4:24052809-24052828 | None:intergenic | 55.0% | |
| ATCCACGATGGCAGCTTCCA+TGG | - | chr6.4:24054346-24054365 | None:intergenic | 55.0% | |
| CAAGAGGATCTTCCCTCAGG+AGG | + | chr6.4:24053411-24053430 | MS.gene09466:CDS | 55.0% | |
| CCTTTCTGAGTGGATGGCAC+CGG | - | chr6.4:24054258-24054277 | None:intergenic | 55.0% | |
| CGAGGAACCATGGAAAGGGA+AGG | + | chr6.4:24053900-24053919 | MS.gene09466:CDS | 55.0% | |
| CGAGTTTGAGGGTGGTGAGT+GGG | - | chr6.4:24052808-24052827 | None:intergenic | 55.0% | |
| CTCCTGAGGGAAGATCCTCT+TGG | - | chr6.4:24053413-24053432 | None:intergenic | 55.0% | |
| CTTTCTGAGTGGATGGCACC+GGG | - | chr6.4:24054257-24054276 | None:intergenic | 55.0% | |
| GAGAAGTGGCTGAGTTGCAG+TGG | + | chr6.4:24053743-24053762 | MS.gene09466:CDS | 55.0% | |
| GCAGCTTCCATGGCTTCTAC+AGG | - | chr6.4:24054336-24054355 | None:intergenic | 55.0% | |
| GCCACTCCTTTCTGAGTGGA+TGG | - | chr6.4:24054264-24054283 | None:intergenic | 55.0% | |
| GCCATCCACTCAGAAAGGAG+TGG | + | chr6.4:24054260-24054279 | MS.gene09466:CDS | 55.0% | |
| GTAACCGAAACCCACCGATG+GGG | + | chr6.4:24052654-24052673 | MS.gene09466:CDS | 55.0% | |
| GTTTGAGCAGCAGTGGGGTT+AGG | - | chr6.4:24052560-24052579 | None:intergenic | 55.0% | |
| TAGGGTTGCTTCTGTGGCCA+TGG | + | chr6.4:24053576-24053595 | MS.gene09466:CDS | 55.0% | |
| TCTTGGTGAACCCCATCGGT+GGG | - | chr6.4:24052667-24052686 | None:intergenic | 55.0% | |
| TGCCAAGAGGATCTTCCCTC+AGG | + | chr6.4:24053408-24053427 | MS.gene09466:CDS | 55.0% | |
| TGCCACAGACACCTCCATAG+GGG | - | chr6.4:24053854-24053873 | None:intergenic | 55.0% | |
| TGTAACCTCCGTGGTGTTCG+TGG | + | chr6.4:24052830-24052849 | MS.gene09466:CDS | 55.0% | |
| TGTTGTGGTGGTTTGAGCGG+TGG | - | chr6.4:24052582-24052601 | None:intergenic | 55.0% | |
| TTCATGCAACCAGAGAGCGG+CGG | - | chr6.4:24052888-24052907 | None:intergenic | 55.0% | |
| TTCTTGGTGAACCCCATCGG+TGG | - | chr6.4:24052668-24052687 | None:intergenic | 55.0% | |
| TTTCTGAGTGGATGGCACCG+GGG | - | chr6.4:24054256-24054275 | None:intergenic | 55.0% | |
| ! | TGAACCCCATCGGTGGGTTT+CGG | - | chr6.4:24052661-24052680 | None:intergenic | 55.0% |
| !! | AAAGGAGTGGCGCTGGTAAG+TGG | + | chr6.4:24054273-24054292 | MS.gene09466:CDS | 55.0% |
| !! | AAGGAGTGGCGCTGGTAAGT+GGG | + | chr6.4:24054274-24054293 | MS.gene09466:CDS | 55.0% |
| !! | AGGGAGTATCGGGGACAACA+TGG | - | chr6.4:24052742-24052761 | None:intergenic | 55.0% |
| !! | GGTGCCGTTGAGGAAAGCAT+TGG | + | chr6.4:24053501-24053520 | MS.gene09466:CDS | 55.0% |
| AGCCATGGAAGCTGCCATCG+TGG | + | chr6.4:24054341-24054360 | MS.gene09466:CDS | 60.0% | |
| AGCGGTGGTTTGAGCAGCAG+TGG | - | chr6.4:24052567-24052586 | None:intergenic | 60.0% | |
| CACTCAGAAAGGAGTGGCGC+TGG | + | chr6.4:24054266-24054285 | MS.gene09466:CDS | 60.0% | |
| CAGCGCCACTCCTTTCTGAG+TGG | - | chr6.4:24054268-24054287 | None:intergenic | 60.0% | |
| CGGTGGTTTGAGCAGCAGTG+GGG | - | chr6.4:24052565-24052584 | None:intergenic | 60.0% | |
| CTCCGTGGTGTTCGTGGTAC+CGG | + | chr6.4:24052836-24052855 | MS.gene09466:CDS | 60.0% | |
| GAGAGATTCGAAGGCCACCC+CGG | + | chr6.4:24054236-24054255 | MS.gene09466:CDS | 60.0% | |
| GCGGTGGTTTGAGCAGCAGT+GGG | - | chr6.4:24052566-24052585 | None:intergenic | 60.0% | |
| TGCCGGTACCACGAACACCA+CGG | - | chr6.4:24052841-24052860 | None:intergenic | 60.0% | |
| TGTAGATCTCAGGTGGGCCG+AGG | - | chr6.4:24052523-24052542 | None:intergenic | 60.0% | |
| ! | ATCGAGGCATGGGTTACCGG+TGG | - | chr6.4:24052711-24052730 | None:intergenic | 60.0% |
| !! | CCGGTGCCATCCACTCAGAA+AGG | + | chr6.4:24054255-24054274 | MS.gene09466:CDS | 60.0% |
| !! | GACCCCTATGGAGGTGTCTG+TGG | + | chr6.4:24053849-24053868 | MS.gene09466:CDS | 60.0% |
| !! | GAGGGTGGTGAGTGGGTTGT+GGG | - | chr6.4:24052801-24052820 | None:intergenic | 60.0% |
| !! | TGAGGGTGGTGAGTGGGTTG+TGG | - | chr6.4:24052802-24052821 | None:intergenic | 60.0% |
| AGGTGGGCCGAGGAGAGTGA+CGG | - | chr6.4:24052513-24052532 | None:intergenic | 65.0% | |
| ATGGCCGCCGTCACTCTCCT+CGG | + | chr6.4:24052503-24052522 | MS.gene09466:CDS | 65.0% | |
| CGGTACCACGAACACCACGG+AGG | - | chr6.4:24052838-24052857 | None:intergenic | 65.0% | |
| CTGATACTCGGGGCCAGCGA+TGG | - | chr6.4:24054409-24054428 | None:intergenic | 65.0% | |
| GCCAGCGATGGCAGCTTCCA+TGG | - | chr6.4:24054397-24054416 | None:intergenic | 65.0% | |
| GCCATGGAAGCTGCCATCGC+TGG | + | chr6.4:24054393-24054412 | MS.gene09466:CDS | 65.0% | |
| GCTTCTATGCCGCCGCTCTC+TGG | + | chr6.4:24052876-24052895 | MS.gene09466:CDS | 65.0% | |
| TGGGCCGAGGAGAGTGACGG+CGG | - | chr6.4:24052510-24052529 | None:intergenic | 70.0% | |
| ! | CTGAGTGGATGGCACCGGGG+TGG | - | chr6.4:24054253-24054272 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 24052503 | 24054449 | 24052503 | ID=MS.gene09466 |
| chr6.4 | mRNA | 24052503 | 24054449 | 24052503 | ID=MS.gene09466.t1;Parent=MS.gene09466 |
| chr6.4 | exon | 24052503 | 24054449 | 24052503 | ID=MS.gene09466.t1.exon1;Parent=MS.gene09466.t1 |
| chr6.4 | CDS | 24052503 | 24054449 | 24052503 | ID=cds.MS.gene09466.t1;Parent=MS.gene09466.t1 |
| Gene Sequence |
| Protein sequence |
