Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09596.t1 | XP_003611587.1 | 99.6 | 276 | 1 | 0 | 1 | 276 | 1 | 276 | 8.50E-147 | 529.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09596.t1 | Q9FJX3 | 66.3 | 276 | 93 | 0 | 1 | 276 | 1 | 276 | 8.1e-106 | 384.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09596.t1 | G7K2J4 | 99.6 | 276 | 1 | 0 | 1 | 276 | 1 | 276 | 6.1e-147 | 529.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene20480 | MS.gene09596 | PPI |
| MS.gene09596 | MS.gene030985 | PPI |
| MS.gene74761 | MS.gene09596 | PPI |
| MS.gene043298 | MS.gene09596 | PPI |
| MS.gene021652 | MS.gene09596 | PPI |
| MS.gene79650 | MS.gene09596 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09596.t1 | MTR_5g015580 | 99.638 | 276 | 1 | 0 | 1 | 276 | 1 | 276 | 0.0 | 545 |
| MS.gene09596.t1 | MTR_1g018205 | 56.727 | 275 | 119 | 0 | 2 | 276 | 3 | 277 | 7.38e-111 | 321 |
| MS.gene09596.t1 | MTR_6g011390 | 49.281 | 278 | 139 | 1 | 1 | 276 | 1 | 278 | 3.98e-92 | 274 |
| MS.gene09596.t1 | MTR_7g009330 | 49.818 | 275 | 138 | 0 | 2 | 276 | 3 | 277 | 1.36e-90 | 270 |
| MS.gene09596.t1 | MTR_8g469150 | 41.304 | 276 | 162 | 0 | 1 | 276 | 1 | 276 | 3.86e-76 | 233 |
| MS.gene09596.t1 | MTR_4g128300 | 42.652 | 279 | 157 | 2 | 1 | 276 | 1 | 279 | 2.78e-74 | 228 |
| MS.gene09596.t1 | MTR_8g469150 | 40.075 | 267 | 160 | 0 | 1 | 267 | 1 | 267 | 1.27e-70 | 219 |
| MS.gene09596.t1 | MTR_4g107840 | 26.148 | 283 | 163 | 5 | 1 | 276 | 1 | 244 | 2.47e-28 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09596.t1 | AT5G67500 | 66.304 | 276 | 93 | 0 | 1 | 276 | 1 | 276 | 4.21e-140 | 395 |
| MS.gene09596.t1 | AT5G67500 | 60.396 | 303 | 93 | 1 | 1 | 276 | 1 | 303 | 2.58e-134 | 382 |
| MS.gene09596.t1 | AT5G67500 | 65.918 | 267 | 91 | 0 | 1 | 267 | 1 | 267 | 5.83e-134 | 381 |
| MS.gene09596.t1 | AT5G15090 | 49.640 | 278 | 134 | 2 | 1 | 276 | 1 | 274 | 2.76e-89 | 266 |
| MS.gene09596.t1 | AT5G15090 | 49.640 | 278 | 134 | 2 | 1 | 276 | 1 | 274 | 2.76e-89 | 266 |
| MS.gene09596.t1 | AT3G01280 | 48.551 | 276 | 142 | 0 | 1 | 276 | 1 | 276 | 8.75e-88 | 263 |
| MS.gene09596.t1 | AT5G57490 | 46.377 | 276 | 146 | 1 | 1 | 276 | 1 | 274 | 1.00e-83 | 252 |
| MS.gene09596.t1 | AT3G49920 | 47.826 | 276 | 94 | 3 | 1 | 276 | 1 | 226 | 3.82e-81 | 244 |
| MS.gene09596.t1 | AT3G49920 | 64.634 | 82 | 29 | 0 | 1 | 82 | 1 | 82 | 1.59e-28 | 106 |
| MS.gene09596.t1 | AT3G49920 | 64.634 | 82 | 29 | 0 | 1 | 82 | 1 | 82 | 1.59e-28 | 106 |
| MS.gene09596.t1 | AT3G49920 | 67.123 | 73 | 24 | 0 | 1 | 73 | 1 | 73 | 3.11e-28 | 104 |
Find 73 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGGATTAGTTTCACGAAAT+TGG | 0.171691 | 5.2:-7366417 | MS.gene09596:CDS |
| CAAGAAGAGTGCTGCTGTTT+TGG | 0.209970 | 5.2:-7366225 | MS.gene09596:CDS |
| AAGTCAGTGCTGACTATTTC+TGG | 0.215709 | 5.2:-7366062 | MS.gene09596:CDS |
| CAGCAGCACTCTTCTTGATT+TGG | 0.271448 | 5.2:+7366231 | None:intergenic |
| TCTTCTTGATTTGGTCTAGA+TGG | 0.272788 | 5.2:+7366240 | None:intergenic |
| AAGCTGCCTGATTATAGTTC+TGG | 0.319469 | 5.2:-7366692 | MS.gene09596:CDS |
| TTTGGCTTTCTTGCCGATAT+CGG | 0.333599 | 5.2:+7370764 | None:intergenic |
| AAGAAAGGAGGACTCTCAAC+TGG | 0.374633 | 5.2:-7366921 | MS.gene09596:CDS |
| TCGTCTTTGTGGATGGAAAA+AGG | 0.380002 | 5.2:+7366726 | None:intergenic |
| TCTGATTTGTTGAGAACCTT+CGG | 0.383141 | 5.2:+7366195 | None:intergenic |
| GGTTCTCCAACCCTTGCATT+TGG | 0.392286 | 5.2:-7366491 | MS.gene09596:CDS |
| AATTGAAGCTATCGTCTTTG+TGG | 0.392722 | 5.2:+7366715 | None:intergenic |
| GTGGCAGAAACATCAAAGAT+AGG | 0.400234 | 5.2:+7366518 | None:intergenic |
| CTGATTTGTTGAGAACCTTC+GGG | 0.400674 | 5.2:+7366196 | None:intergenic |
| CAGTGTAGCGACTGAGGTTA+AGG | 0.410879 | 5.2:+7366550 | None:intergenic |
| GAAATAGTCAGCACTGACTT+TGG | 0.413358 | 5.2:+7366065 | None:intergenic |
| AAATAGTCAGCACTGACTTT+GGG | 0.425846 | 5.2:+7366066 | None:intergenic |
| CCGGGTCTCTACTCCGATAT+CGG | 0.434053 | 5.2:-7370777 | MS.gene09596:CDS |
| AGCAATGGCCAACCCAAACT+TGG | 0.435980 | 5.2:+7366007 | None:intergenic |
| CTTGCATTTGGTGCTGAGGC+AGG | 0.440987 | 5.2:-7366479 | MS.gene09596:CDS |
| ACTTCAACTGCTTTGAAGAA+AGG | 0.441282 | 5.2:-7366936 | MS.gene09596:CDS |
| TTAACAATCAAGGAAAGGTT+GGG | 0.455512 | 5.2:-7366112 | MS.gene09596:CDS |
| AACAAATCAGAACACTATTA+CGG | 0.464512 | 5.2:-7366183 | MS.gene09596:CDS |
| GTTTCATCTTACAGCACTAC+TGG | 0.464789 | 5.2:-7370616 | MS.gene09596:CDS |
| AAAGCTAGGTTTAACAATCA+AGG | 0.477925 | 5.2:-7366122 | MS.gene09596:CDS |
| GCAGGCTATGATACTAAATC+TGG | 0.479364 | 5.2:-7366461 | MS.gene09596:CDS |
| ATCGAAGATGAGCAAGGGAC+CGG | 0.481251 | 5.2:-7370796 | None:intergenic |
| TCTTGATTTGGTCTAGATGG+TGG | 0.484846 | 5.2:+7366243 | None:intergenic |
| TTTGATGTTTCTGCCACTGT+TGG | 0.487886 | 5.2:-7366512 | MS.gene09596:CDS |
| TGGCAGAAACATCAAAGATA+GGG | 0.491347 | 5.2:+7366519 | None:intergenic |
| AACCCTTGCATTTGGTGCTG+AGG | 0.491987 | 5.2:-7366483 | MS.gene09596:CDS |
| AGGACTCTCAACTGGGGATG+TGG | 0.494637 | 5.2:-7366913 | MS.gene09596:CDS |
| TTTAACAATCAAGGAAAGGT+TGG | 0.502987 | 5.2:-7366113 | MS.gene09596:CDS |
| CTTTCCTATCAGTGGCGACA+AGG | 0.504369 | 5.2:-7366291 | MS.gene09596:intron |
| CTCTCAACTGGGGATGTGGC+AGG | 0.509688 | 5.2:-7366909 | MS.gene09596:CDS |
| ACCTTGCCAGAACTATAATC+AGG | 0.517672 | 5.2:+7366686 | None:intergenic |
| AGTAGTGCTGTAAGATGAAA+CGG | 0.520738 | 5.2:+7370618 | None:intergenic |
| TGATTTGGTCTAGATGGTGG+AGG | 0.521733 | 5.2:+7366246 | None:intergenic |
| GAAGCTATCGTCTTTGTGGA+TGG | 0.527003 | 5.2:+7366719 | None:intergenic |
| TGAGGTTGATACCAAGGCCC+TGG | 0.529736 | 5.2:-7366039 | MS.gene09596:CDS |
| CAGAACACTATTACGGTTGG+AGG | 0.533154 | 5.2:-7366176 | MS.gene09596:CDS |
| TTGGGAAGAGCTCGTGCTGT+AGG | 0.540312 | 5.2:+7366084 | None:intergenic |
| TCTAAAATCGAAGATGAGCA+AGG | 0.548154 | 5.2:-7370802 | None:intergenic |
| CTGCCTCAGCACCAAATGCA+AGG | 0.548233 | 5.2:+7366480 | None:intergenic |
| AATCAGAACACTATTACGGT+TGG | 0.550635 | 5.2:-7366179 | MS.gene09596:CDS |
| AGGTTAAGGTAGCATGGTCG+TGG | 0.557344 | 5.2:+7366564 | None:intergenic |
| TCAGCACCAAATGCAAGGGT+TGG | 0.562271 | 5.2:+7366485 | None:intergenic |
| TAGGTTTAACAATCAAGGAA+AGG | 0.566100 | 5.2:-7366117 | MS.gene09596:CDS |
| GCAATGGCCAACCCAAACTT+GGG | 0.566984 | 5.2:+7366008 | None:intergenic |
| ACTTCAAGGTTTGAGAGCAA+TGG | 0.567035 | 5.2:+7365992 | None:intergenic |
| AGAAAGGAGGACTCTCAACT+GGG | 0.567353 | 5.2:-7366920 | MS.gene09596:CDS |
| TTCTGGTGAGGTTGATACCA+AGG | 0.578817 | 5.2:-7366045 | MS.gene09596:CDS |
| TCGAAGATGAGCAAGGGACC+GGG | 0.581110 | 5.2:-7370795 | None:intergenic |
| CCGATATCGGAGTAGAGACC+CGG | 0.593325 | 5.2:+7370777 | None:intergenic |
| CTAGCTTTGATCTGTGTCAG+AGG | 0.598866 | 5.2:+7366137 | None:intergenic |
| AGTGCTGACTATTTCTGGTG+AGG | 0.600743 | 5.2:-7366057 | MS.gene09596:CDS |
| TAACAATCAAGGAAAGGTTG+GGG | 0.603142 | 5.2:-7366111 | MS.gene09596:CDS |
| TGCCTCAGCACCAAATGCAA+GGG | 0.611427 | 5.2:+7366481 | None:intergenic |
| TCAACTGCTTTGAAGAAAGG+AGG | 0.613940 | 5.2:-7366933 | MS.gene09596:CDS |
| CGACTGAGGTTAAGGTAGCA+TGG | 0.618567 | 5.2:+7366558 | None:intergenic |
| TTGCTTCAGTGTAGCGACTG+AGG | 0.620374 | 5.2:+7366544 | None:intergenic |
| GCCTGATTATAGTTCTGGCA+AGG | 0.623753 | 5.2:-7366687 | MS.gene09596:intron |
| GGCAGAAACATCAAAGATAG+GGG | 0.624754 | 5.2:+7366520 | None:intergenic |
| TTTCCTATCAGTGGCGACAA+GGG | 0.625564 | 5.2:-7366290 | MS.gene09596:intron |
| CTCTGACACAGATCAAAGCT+AGG | 0.626706 | 5.2:-7366136 | MS.gene09596:CDS |
| CTAAAATCGAAGATGAGCAA+GGG | 0.627918 | 5.2:-7370801 | None:intergenic |
| TAGCTTTGATCTGTGTCAGA+GGG | 0.634327 | 5.2:+7366138 | None:intergenic |
| TGAAACGGTAAGCTTCTGAT+CGG | 0.639844 | 5.2:+7370633 | None:intergenic |
| AACAATCAAGGAAAGGTTGG+GGG | 0.650443 | 5.2:-7366110 | MS.gene09596:CDS |
| GATATCGGCAAGAAAGCCAA+AGG | 0.666859 | 5.2:-7370762 | MS.gene09596:intron |
| AGAACACTATTACGGTTGGA+GGG | 0.671397 | 5.2:-7366175 | MS.gene09596:CDS |
| GAAAGGAGGACTCTCAACTG+GGG | 0.714176 | 5.2:-7366919 | MS.gene09596:CDS |
| AAGGGTTGGAGAACCAACAG+TGG | 0.718653 | 5.2:+7366499 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACATTAAAATAAAAAGAT+AGG | + | chr5.2:7366934-7366953 | None:intergenic | 10.0% |
| !! | ATGTAGAATATAATTTAAAA+AGG | - | chr5.2:7368466-7368485 | MS.gene09596:intron | 10.0% |
| !! | TAATAATAAAAAGTAAGAAA+GGG | + | chr5.2:7369455-7369474 | None:intergenic | 10.0% |
| !! | TGTAGAATATAATTTAAAAA+GGG | - | chr5.2:7368467-7368486 | MS.gene09596:intron | 10.0% |
| !! | TTAATAATAAAAAGTAAGAA+AGG | + | chr5.2:7369456-7369475 | None:intergenic | 10.0% |
| !! | TTATTAATTATAAATTGTAG+TGG | + | chr5.2:7366215-7366234 | None:intergenic | 10.0% |
| !!! | AAAGTGTTATAATAAAATAA+AGG | + | chr5.2:7368196-7368215 | None:intergenic | 10.0% |
| !!! | AATTTTCAAAAAAGAATTAA+TGG | + | chr5.2:7366801-7366820 | None:intergenic | 10.0% |
| !!! | ACAGTTTTATTTTTTTAATA+GGG | - | chr5.2:7369590-7369609 | MS.gene09596:intron | 10.0% |
| !!! | ATTTTCAAAAAAGAATTAAT+GGG | + | chr5.2:7366800-7366819 | None:intergenic | 10.0% |
| !!! | TACAGTTTTATTTTTTTAAT+AGG | - | chr5.2:7369589-7369608 | MS.gene09596:intron | 10.0% |
| !! | AGAGAAAAAATAATAAAAGA+GGG | + | chr5.2:7367416-7367435 | None:intergenic | 15.0% |
| !! | ATAAAATGTAAATGTAATGT+AGG | - | chr5.2:7367954-7367973 | MS.gene09596:intron | 15.0% |
| !! | GTAGAATATAATTTAAAAAG+GGG | - | chr5.2:7368468-7368487 | MS.gene09596:intron | 15.0% |
| !! | TAATAAGAAAAAGTAAGAAA+GGG | + | chr5.2:7369244-7369263 | None:intergenic | 15.0% |
| !! | TAGAATATAATTTAAAAAGG+GGG | - | chr5.2:7368469-7368488 | MS.gene09596:intron | 15.0% |
| !! | TTAATAAGAAAAAGTAAGAA+AGG | + | chr5.2:7369245-7369264 | None:intergenic | 15.0% |
| !!! | AACGAAATATTTTAATATCA+AGG | + | chr5.2:7366534-7366553 | None:intergenic | 15.0% |
| !!! | ACAATAACTCTTTTTATATA+GGG | + | chr5.2:7366638-7366657 | None:intergenic | 15.0% |
| !!! | AGTTTTATTTTTTTAATAGG+GGG | - | chr5.2:7369592-7369611 | MS.gene09596:intron | 15.0% |
| !!! | ATTTACATTTTATTACTTAC+AGG | + | chr5.2:7367947-7367966 | None:intergenic | 15.0% |
| !!! | CAGTTTTATTTTTTTAATAG+GGG | - | chr5.2:7369591-7369610 | MS.gene09596:intron | 15.0% |
| !!! | TACATTTTCATAATTCATTT+TGG | - | chr5.2:7369285-7369304 | MS.gene09596:intron | 15.0% |
| !!! | TTAGAATTTTGATATATTGA+AGG | - | chr5.2:7366726-7366745 | MS.gene09596:CDS | 15.0% |
| !!! | TTTACATTTTATTACTTACA+GGG | + | chr5.2:7367946-7367965 | None:intergenic | 15.0% |
| !!! | TTTTCAAAAAAGAATTAATG+GGG | + | chr5.2:7366799-7366818 | None:intergenic | 15.0% |
| !! | AGAATATAATTTAAAAAGGG+GGG | - | chr5.2:7368470-7368489 | MS.gene09596:intron | 20.0% |
| !! | ATCTAATGTTCATTTCAATA+TGG | - | chr5.2:7369805-7369824 | MS.gene09596:intron | 20.0% |
| !! | ATGCTTATTACCTAAAATTT+GGG | - | chr5.2:7369126-7369145 | MS.gene09596:intron | 20.0% |
| !! | CTTATGTTCAATTAATTCTT+GGG | - | chr5.2:7366395-7366414 | MS.gene09596:CDS | 20.0% |
| !! | GAGAGAAAAAATAATAAAAG+AGG | + | chr5.2:7367417-7367436 | None:intergenic | 20.0% |
| !! | TAAACAAAATAGCAATATCT+TGG | - | chr5.2:7368221-7368240 | MS.gene09596:intron | 20.0% |
| !! | TAAGAAAAATCACAAATCAA+TGG | - | chr5.2:7368725-7368744 | MS.gene09596:intron | 20.0% |
| !! | TTATGTTCAATTAATTCTTG+GGG | - | chr5.2:7366396-7366415 | MS.gene09596:CDS | 20.0% |
| !!! | ACTTATTGGCTAAAAAATTA+GGG | - | chr5.2:7369337-7369356 | MS.gene09596:intron | 20.0% |
| !!! | AGCTTTATAAATTAATTGTC+TGG | - | chr5.2:7368677-7368696 | MS.gene09596:intron | 20.0% |
| !!! | CACAATAACTCTTTTTATAT+AGG | + | chr5.2:7366639-7366658 | None:intergenic | 20.0% |
| !!! | TACTTATTGGCTAAAAAATT+AGG | - | chr5.2:7369336-7369355 | MS.gene09596:intron | 20.0% |
| !!! | TACTTTTGTGAATTTAGTTT+TGG | - | chr5.2:7368060-7368079 | MS.gene09596:intron | 20.0% |
| !!! | TCTTTTTTGAAAATTTTGAC+CGG | - | chr5.2:7366806-7366825 | MS.gene09596:intron | 20.0% |
| !!! | TTGAAATTTTGATACATTGA+GGG | + | chr5.2:7366473-7366492 | None:intergenic | 20.0% |
| !!! | TTTGAAATTTTGATACATTG+AGG | + | chr5.2:7366474-7366493 | None:intergenic | 20.0% |
| ! | AAAAAGTAAGAAAGGGATAA+AGG | + | chr5.2:7369237-7369256 | None:intergenic | 25.0% |
| ! | AAACGATTTATGAGCATAAA+TGG | + | chr5.2:7368586-7368605 | None:intergenic | 25.0% |
| ! | AACAAATCAGAACACTATTA+CGG | - | chr5.2:7370601-7370620 | MS.gene09596:intron | 25.0% |
| ! | AAGAGTTATTGTGAGTATTA+AGG | - | chr5.2:7366646-7366665 | MS.gene09596:intron | 25.0% |
| ! | AATACTATATGAACAATGTC+TGG | - | chr5.2:7368265-7368284 | MS.gene09596:intron | 25.0% |
| ! | ACAATAAGTAAGTACGTATA+AGG | + | chr5.2:7366606-7366625 | None:intergenic | 25.0% |
| ! | AGAAATTCCAAAAGGAATTA+TGG | + | chr5.2:7369086-7369105 | None:intergenic | 25.0% |
| ! | AGAGTTATTGTGAGTATTAA+GGG | - | chr5.2:7366647-7366666 | MS.gene09596:intron | 25.0% |
| ! | ATAATCATCAATAACGTACA+AGG | - | chr5.2:7369502-7369521 | MS.gene09596:intron | 25.0% |
| ! | ATACTATATGAACAATGTCT+GGG | - | chr5.2:7368266-7368285 | MS.gene09596:intron | 25.0% |
| ! | CATGCTTATTACCTAAAATT+TGG | - | chr5.2:7369125-7369144 | MS.gene09596:intron | 25.0% |
| ! | GCTTATGTTCAATTAATTCT+TGG | - | chr5.2:7366394-7366413 | MS.gene09596:intron | 25.0% |
| ! | TATGTTGCATTCATAAATGT+TGG | - | chr5.2:7368993-7369012 | MS.gene09596:intron | 25.0% |
| ! | TGCTTATTACCTAAAATTTG+GGG | - | chr5.2:7369127-7369146 | MS.gene09596:intron | 25.0% |
| ! | TTATGTACAGACTAAAATAC+TGG | + | chr5.2:7367855-7367874 | None:intergenic | 25.0% |
| ! | TTGTTTATCAAAAACTCGTA+AGG | - | chr5.2:7367126-7367145 | MS.gene09596:intron | 25.0% |
| !! | AGTTTTACTAAATACAACAC+TGG | - | chr5.2:7370347-7370366 | MS.gene09596:intron | 25.0% |
| !! | CTGATTCATATTTTATTACG+TGG | - | chr5.2:7367878-7367897 | MS.gene09596:intron | 25.0% |
| !! | GTGATTTTTCATCTTTTGTA+TGG | - | chr5.2:7370123-7370142 | MS.gene09596:intron | 25.0% |
| !! | GTTCTTTTTAAATTCATGTC+TGG | - | chr5.2:7369672-7369691 | MS.gene09596:intron | 25.0% |
| !! | GTTTTACTAAATACAACACT+GGG | - | chr5.2:7370348-7370367 | MS.gene09596:intron | 25.0% |
| !! | TACATTTCCATAATTCCTTT+TGG | - | chr5.2:7369076-7369095 | MS.gene09596:intron | 25.0% |
| !! | TTCTGTATAAACTTGTTTCA+CGG | - | chr5.2:7368032-7368051 | MS.gene09596:intron | 25.0% |
| !! | TTGTACGTTATTGATGATTA+TGG | + | chr5.2:7369503-7369522 | None:intergenic | 25.0% |
| !!! | ACTGTTTACGATGTTTTTAA+AGG | + | chr5.2:7366909-7366928 | None:intergenic | 25.0% |
| !!! | ATGATCAATTGATTTGTCTA+AGG | - | chr5.2:7368964-7368983 | MS.gene09596:intron | 25.0% |
| !!! | CTCAATTTTGACATCAATAA+GGG | + | chr5.2:7369921-7369940 | None:intergenic | 25.0% |
| !!! | TCTCAATTTTGACATCAATA+AGG | + | chr5.2:7369922-7369941 | None:intergenic | 25.0% |
| !!! | TGATCAATTGATTTGTCTAA+GGG | - | chr5.2:7368965-7368984 | MS.gene09596:intron | 25.0% |
| !!! | TGTTTTAGATCTTTTGACAA+AGG | - | chr5.2:7366119-7366138 | MS.gene09596:CDS | 25.0% |
| !!! | TTACGATGTTTTTAAAGGAA+CGG | + | chr5.2:7366904-7366923 | None:intergenic | 25.0% |
| !!! | TTATTTTTTTAATAGGGGGA+TGG | - | chr5.2:7369596-7369615 | MS.gene09596:intron | 25.0% |
| !!! | TTTTCATGTCTGAAATACTT+GGG | - | chr5.2:7368541-7368560 | MS.gene09596:intron | 25.0% |
| AAAAAAACTAACACACGACA+TGG | + | chr5.2:7367227-7367246 | None:intergenic | 30.0% | |
| AAAGCTAGGTTTAACAATCA+AGG | - | chr5.2:7370662-7370681 | MS.gene09596:intron | 30.0% | |
| AAGGGATTATTTAAGCGTTA+GGG | - | chr5.2:7366665-7366684 | MS.gene09596:intron | 30.0% | |
| AATAAACATCAGCCTTAACA+AGG | + | chr5.2:7367907-7367926 | None:intergenic | 30.0% | |
| ACTGAATGTTTAGAGACAAT+TGG | - | chr5.2:7368302-7368321 | MS.gene09596:intron | 30.0% | |
| ATGTAAGGAGAAATTCCAAA+AGG | + | chr5.2:7369094-7369113 | None:intergenic | 30.0% | |
| ATTCTGTATAAGTGCGATAA+TGG | + | chr5.2:7368169-7368188 | None:intergenic | 30.0% | |
| CAAAATTTCAAAATAGTCCC+TGG | - | chr5.2:7366482-7366501 | MS.gene09596:CDS | 30.0% | |
| CAAATACTAAGAATGTGCTA+TGG | - | chr5.2:7369728-7369747 | MS.gene09596:intron | 30.0% | |
| CAACTTGGATGGATAAAATT+TGG | + | chr5.2:7367293-7367312 | None:intergenic | 30.0% | |
| CATAGCACATTCTTAGTATT+TGG | + | chr5.2:7369730-7369749 | None:intergenic | 30.0% | |
| GAGATTTGTAACAGAAATCT+TGG | + | chr5.2:7370432-7370451 | None:intergenic | 30.0% | |
| GGAATTATGGAAATGTACAA+TGG | + | chr5.2:7369073-7369092 | None:intergenic | 30.0% | |
| TAAGGGATTATTTAAGCGTT+AGG | - | chr5.2:7366664-7366683 | MS.gene09596:intron | 30.0% | |
| TAATTGCATTATCAGATGTC+AGG | - | chr5.2:7366263-7366282 | MS.gene09596:CDS | 30.0% | |
| TAGGTTTAACAATCAAGGAA+AGG | - | chr5.2:7370667-7370686 | MS.gene09596:intron | 30.0% | |
| TATGAAGCTTAGATATAGAC+AGG | + | chr5.2:7366854-7366873 | None:intergenic | 30.0% | |
| TTAACAATCAAGGAAAGGTT+GGG | - | chr5.2:7370672-7370691 | MS.gene09596:intron | 30.0% | |
| TTTAACAATCAAGGAAAGGT+TGG | - | chr5.2:7370671-7370690 | MS.gene09596:intron | 30.0% | |
| TTTCTGTTACAAATCTCTAG+CGG | - | chr5.2:7370435-7370454 | MS.gene09596:intron | 30.0% | |
| ! | AATATCTTTTGTGTTGTCCT+TGG | - | chr5.2:7367185-7367204 | MS.gene09596:intron | 30.0% |
| ! | ACAAGTTTATACAGAAGCAT+TGG | + | chr5.2:7368028-7368047 | None:intergenic | 30.0% |
| ! | TAATCACACATCAGAAGTAT+CGG | + | chr5.2:7366367-7366386 | None:intergenic | 30.0% |
| ! | TGTTTTGTCTATAGACAAAG+CGG | + | chr5.2:7367359-7367378 | None:intergenic | 30.0% |
| !! | ATTAATTTGTTAGCCGTTGT+CGG | - | chr5.2:7366331-7366350 | MS.gene09596:intron | 30.0% |
| !! | ATTGTACTTTCTGGTTATCA+TGG | - | chr5.2:7369697-7369716 | MS.gene09596:intron | 30.0% |
| !! | GTTTTCATGTCTGAAATACT+TGG | - | chr5.2:7368540-7368559 | MS.gene09596:intron | 30.0% |
| !! | TTATACAGAAGCATTGGATT+TGG | + | chr5.2:7368022-7368041 | None:intergenic | 30.0% |
| !!! | AGTATTTTAGTCTGTACAAG+CGG | - | chr5.2:7367497-7367516 | MS.gene09596:intron | 30.0% |
| !!! | GACTATTTTGACTAACAAAG+TGG | - | chr5.2:7366687-7366706 | MS.gene09596:intron | 30.0% |
| AAAAAGGTCAGTGAATGTGA+GGG | + | chr5.2:7370045-7370064 | None:intergenic | 35.0% | |
| AACATGTTCTTTCCTATCAG+TGG | - | chr5.2:7370485-7370504 | MS.gene09596:intron | 35.0% | |
| AATCAGAACACTATTACGGT+TGG | - | chr5.2:7370605-7370624 | MS.gene09596:intron | 35.0% | |
| AATTGAAGCTATCGTCTTTG+TGG | + | chr5.2:7370072-7370091 | None:intergenic | 35.0% | |
| ACTAACAAAATGCACAACCA+GGG | + | chr5.2:7366502-7366521 | None:intergenic | 35.0% | |
| ACTAACAAAGTGGACAATCA+GGG | - | chr5.2:7366697-7366716 | MS.gene09596:CDS | 35.0% | |
| AGACATGAACTTTGACAGAA+GGG | - | chr5.2:7368334-7368353 | MS.gene09596:intron | 35.0% | |
| AGTAGTGCTGTAAGATGAAA+CGG | + | chr5.2:7366169-7366188 | None:intergenic | 35.0% | |
| ATTATCAGATGTCAGGTTAC+TGG | - | chr5.2:7366270-7366289 | MS.gene09596:CDS | 35.0% | |
| ATTCATTCGTTCCTCATTCA+GGG | + | chr5.2:7366438-7366457 | None:intergenic | 35.0% | |
| CAATGGCAACACTAATCATT+TGG | + | chr5.2:7369056-7369075 | None:intergenic | 35.0% | |
| GATATTCAGCCTAACAATGT+CGG | + | chr5.2:7367171-7367190 | None:intergenic | 35.0% | |
| GCTTGTACAGACTAAAATAC+TGG | + | chr5.2:7367498-7367517 | None:intergenic | 35.0% | |
| GTTGCATACTGCATACTTAT+TGG | - | chr5.2:7369323-7369342 | MS.gene09596:intron | 35.0% | |
| TAACAATCAAGGAAAGGTTG+GGG | - | chr5.2:7370673-7370692 | MS.gene09596:intron | 35.0% | |
| TAATGGGGTAATAGTCACTT+TGG | + | chr5.2:7366784-7366803 | None:intergenic | 35.0% | |
| TAATTTCCAGACACAAAGCT+TGG | + | chr5.2:7369649-7369668 | None:intergenic | 35.0% | |
| TACCTAAAATTTGGGGATAG+TGG | - | chr5.2:7369134-7369153 | MS.gene09596:intron | 35.0% | |
| TAGACATGAACTTTGACAGA+AGG | - | chr5.2:7368333-7368352 | MS.gene09596:intron | 35.0% | |
| TATTCATTCGTTCCTCATTC+AGG | + | chr5.2:7366439-7366458 | None:intergenic | 35.0% | |
| TATTGAGTGGCCTATACAAA+AGG | + | chr5.2:7369022-7369041 | None:intergenic | 35.0% | |
| TGGAGAAAAAACCCAAGTTT+GGG | - | chr5.2:7370765-7370784 | MS.gene09596:CDS | 35.0% | |
| TGGCAGAAACATCAAAGATA+GGG | + | chr5.2:7370268-7370287 | None:intergenic | 35.0% | |
| TTTAAAAAGGGGGGAATTCT+TGG | - | chr5.2:7368479-7368498 | MS.gene09596:intron | 35.0% | |
| TTTCAACTTGGTTGTTCTGA+AGG | - | chr5.2:7369392-7369411 | MS.gene09596:intron | 35.0% | |
| ! | ATCCACTATCCCCAAATTTT+AGG | + | chr5.2:7369139-7369158 | None:intergenic | 35.0% |
| ! | ATGTTGGAAGCCTTTTGTAT+AGG | - | chr5.2:7369009-7369028 | MS.gene09596:intron | 35.0% |
| ! | GAATCGATTCAATTCACCTT+TGG | + | chr5.2:7366041-7366060 | None:intergenic | 35.0% |
| ! | GATTTGTCATTTGCAGTTAG+AGG | - | chr5.2:7370187-7370206 | MS.gene09596:intron | 35.0% |
| ! | TTTATCCATCCAAGTTGAGT+CGG | - | chr5.2:7367296-7367315 | MS.gene09596:intron | 35.0% |
| ! | TTTGTTGTCTATAGACGAAG+CGG | + | chr5.2:7367257-7367276 | None:intergenic | 35.0% |
| !! | AAATAGTCAGCACTGACTTT+GGG | + | chr5.2:7370721-7370740 | None:intergenic | 35.0% |
| !! | ACTTCAACTGCTTTGAAGAA+AGG | - | chr5.2:7369848-7369867 | MS.gene09596:intron | 35.0% |
| !! | GAGCATTTGATGATGATTGT+CGG | - | chr5.2:7366878-7366897 | MS.gene09596:CDS | 35.0% |
| !! | TCTGATTTGTTGAGAACCTT+CGG | + | chr5.2:7370592-7370611 | None:intergenic | 35.0% |
| !! | TCTTCTTGATTTGGTCTAGA+TGG | + | chr5.2:7370547-7370566 | None:intergenic | 35.0% |
| !! | TGGGATTAGTTTCACGAAAT+TGG | - | chr5.2:7370367-7370386 | MS.gene09596:intron | 35.0% |
| !! | TGGTTTTCAAGACATGTTGT+TGG | - | chr5.2:7368112-7368131 | MS.gene09596:intron | 35.0% |
| !! | TGTATAAGTGCGATAATGGA+TGG | + | chr5.2:7368165-7368184 | None:intergenic | 35.0% |
| !!! | AAACTTGGGTTTTTTCTCCA+GGG | + | chr5.2:7370765-7370784 | None:intergenic | 35.0% |
| !!! | ATGGTTTTAGGAATCAGACA+TGG | - | chr5.2:7368417-7368436 | MS.gene09596:intron | 35.0% |
| AACAATCAAGGAAAGGTTGG+GGG | - | chr5.2:7370674-7370693 | MS.gene09596:intron | 40.0% | |
| AAGCTGCCTGATTATAGTTC+TGG | - | chr5.2:7370092-7370111 | MS.gene09596:intron | 40.0% | |
| AATTGAGACAGCGTCAATTG+TGG | - | chr5.2:7369934-7369953 | MS.gene09596:intron | 40.0% | |
| ACCTTGCCAGAACTATAATC+AGG | + | chr5.2:7370101-7370120 | None:intergenic | 40.0% | |
| AGAACACTATTACGGTTGGA+GGG | - | chr5.2:7370609-7370628 | MS.gene09596:intron | 40.0% | |
| AGGCTCAGAAAAATTGTTGG+TGG | - | chr5.2:7368765-7368784 | MS.gene09596:intron | 40.0% | |
| ATTACGTGGTCACCTTGTTA+AGG | - | chr5.2:7367892-7367911 | MS.gene09596:intron | 40.0% | |
| ATTGAGACAGCGTCAATTGT+GGG | - | chr5.2:7369935-7369954 | MS.gene09596:intron | 40.0% | |
| CAATATGGCTTCTTCCTTTC+AGG | - | chr5.2:7369820-7369839 | MS.gene09596:intron | 40.0% | |
| CAGAGGCTCAGAAAAATTGT+TGG | - | chr5.2:7368762-7368781 | MS.gene09596:intron | 40.0% | |
| CTCCACACTTAAACGTGATT+TGG | - | chr5.2:7366997-7367016 | MS.gene09596:intron | 40.0% | |
| CTGGAGAAAAAACCCAAGTT+TGG | - | chr5.2:7370764-7370783 | MS.gene09596:CDS | 40.0% | |
| CTTTCTGCTAGTCATAAGAG+CGG | - | chr5.2:7368083-7368102 | MS.gene09596:intron | 40.0% | |
| GAAAAAACCCAAGTTTGGGT+TGG | - | chr5.2:7370769-7370788 | MS.gene09596:CDS | 40.0% | |
| GAAAAAGGTCAGTGAATGTG+AGG | + | chr5.2:7370046-7370065 | None:intergenic | 40.0% | |
| GACTAACAAAATGCACAACC+AGG | + | chr5.2:7366503-7366522 | None:intergenic | 40.0% | |
| GACTAACAAAGTGGACAATC+AGG | - | chr5.2:7366696-7366715 | MS.gene09596:CDS | 40.0% | |
| GAGATTGAGTGATTGATCAC+TGG | - | chr5.2:7368850-7368869 | MS.gene09596:intron | 40.0% | |
| GCAGGCTATGATACTAAATC+TGG | - | chr5.2:7370323-7370342 | MS.gene09596:intron | 40.0% | |
| GGCAGAAACATCAAAGATAG+GGG | + | chr5.2:7370267-7370286 | None:intergenic | 40.0% | |
| GGTGATTCAAACGTATTGAG+TGG | + | chr5.2:7369035-7369054 | None:intergenic | 40.0% | |
| GTGGCAGAAACATCAAAGAT+AGG | + | chr5.2:7370269-7370288 | None:intergenic | 40.0% | |
| GTTTCATCTTACAGCACTAC+TGG | - | chr5.2:7366168-7366187 | MS.gene09596:CDS | 40.0% | |
| TATGCAGTATGCAACATGTG+AGG | + | chr5.2:7369318-7369337 | None:intergenic | 40.0% | |
| TCAGACATGGAAGAAACAGA+TGG | - | chr5.2:7368430-7368449 | MS.gene09596:intron | 40.0% | |
| TCGTCTTTGTGGATGGAAAA+AGG | + | chr5.2:7370061-7370080 | None:intergenic | 40.0% | |
| TCTGATGTGTGATTAGTGTC+TGG | - | chr5.2:7366372-7366391 | MS.gene09596:intron | 40.0% | |
| TGAAACGGTAAGCTTCTGAT+CGG | + | chr5.2:7366154-7366173 | None:intergenic | 40.0% | |
| TGCCAAATCACGTTTAAGTG+TGG | + | chr5.2:7367002-7367021 | None:intergenic | 40.0% | |
| TGTCTATAGACAAAGCGGTT+TGG | + | chr5.2:7367354-7367373 | None:intergenic | 40.0% | |
| TGTCTGGCTATTGTACTTTC+TGG | - | chr5.2:7369688-7369707 | MS.gene09596:intron | 40.0% | |
| TTGAGAAATCTGTAGAGGAC+AGG | - | chr5.2:7368882-7368901 | MS.gene09596:intron | 40.0% | |
| TTGTTGTCTATAGACGAAGC+GGG | + | chr5.2:7367256-7367275 | None:intergenic | 40.0% | |
| TTTCAGCTTGGTTGTTCTGA+AGG | - | chr5.2:7369182-7369201 | MS.gene09596:intron | 40.0% | |
| ! | ATGTGAGGGTTGTATTGATC+TGG | + | chr5.2:7370031-7370050 | None:intergenic | 40.0% |
| ! | GACTACTTGCTACACATTCA+GGG | - | chr5.2:7366757-7366776 | MS.gene09596:intron | 40.0% |
| ! | GCAATGAAAGCTTTTCAGCT+TGG | - | chr5.2:7369170-7369189 | MS.gene09596:intron | 40.0% |
| ! | GCTCGCTTTAAATGTTTCTG+AGG | + | chr5.2:7367474-7367493 | None:intergenic | 40.0% |
| ! | GGTTGTATTGATCTGGAAGA+GGG | + | chr5.2:7370024-7370043 | None:intergenic | 40.0% |
| ! | GTGAGTTGAGAAATCTGTAG+AGG | - | chr5.2:7368877-7368896 | MS.gene09596:intron | 40.0% |
| ! | TGACTACTTGCTACACATTC+AGG | - | chr5.2:7366756-7366775 | MS.gene09596:intron | 40.0% |
| ! | TTTGATGTTTCTGCCACTGT+TGG | - | chr5.2:7370272-7370291 | MS.gene09596:intron | 40.0% |
| !! | AAGTCAGTGCTGACTATTTC+TGG | - | chr5.2:7370722-7370741 | MS.gene09596:intron | 40.0% |
| !! | ACACTGTCTCTGAAATTGTG+TGG | - | chr5.2:7370164-7370183 | MS.gene09596:intron | 40.0% |
| !! | CACTGTCTCTGAAATTGTGT+GGG | - | chr5.2:7370165-7370184 | MS.gene09596:intron | 40.0% |
| !! | CTGATTTGTTGAGAACCTTC+GGG | + | chr5.2:7370591-7370610 | None:intergenic | 40.0% |
| !! | CTGTTTTGGATATTACCCGA+AGG | - | chr5.2:7370573-7370592 | MS.gene09596:intron | 40.0% |
| !! | GAAATAGTCAGCACTGACTT+TGG | + | chr5.2:7370722-7370741 | None:intergenic | 40.0% |
| !! | GTACTTTCTGGTTATCATGG+TGG | - | chr5.2:7369700-7369719 | MS.gene09596:intron | 40.0% |
| !! | TAGCTTTGATCTGTGTCAGA+GGG | + | chr5.2:7370649-7370668 | None:intergenic | 40.0% |
| !! | TCAACTGCTTTGAAGAAAGG+AGG | - | chr5.2:7369851-7369870 | MS.gene09596:intron | 40.0% |
| !! | TCTTGATTTGGTCTAGATGG+TGG | + | chr5.2:7370544-7370563 | None:intergenic | 40.0% |
| !! | TTTGGCTTTCTTGCCGATAT+CGG | + | chr5.2:7366023-7366042 | None:intergenic | 40.0% |
| !!! | CAAACTTGGGTTTTTTCTCC+AGG | + | chr5.2:7370766-7370785 | None:intergenic | 40.0% |
| AAAACCATCCAAGCCTCCAA+GGG | + | chr5.2:7368405-7368424 | None:intergenic | 45.0% | |
| AAGAAAGGAGGACTCTCAAC+TGG | - | chr5.2:7369863-7369882 | MS.gene09596:intron | 45.0% | |
| AGAAAGGAGGACTCTCAACT+GGG | - | chr5.2:7369864-7369883 | MS.gene09596:intron | 45.0% | |
| AGACAGGACACAACATAGAC+AGG | + | chr5.2:7366838-7366857 | None:intergenic | 45.0% | |
| AGTCATAAGAGCGGAGCATA+TGG | - | chr5.2:7368092-7368111 | MS.gene09596:intron | 45.0% | |
| AGTTGAAGTGAGTGCCTGAA+AGG | + | chr5.2:7369837-7369856 | None:intergenic | 45.0% | |
| ATGCATGTTGACAGCAACGT+AGG | - | chr5.2:7369367-7369386 | MS.gene09596:intron | 45.0% | |
| CAAGCCTATTCCCACTAAGT+GGG | + | chr5.2:7367086-7367105 | None:intergenic | 45.0% | |
| CAGAACACTATTACGGTTGG+AGG | - | chr5.2:7370608-7370627 | MS.gene09596:intron | 45.0% | |
| CAGCAGCACTCTTCTTGATT+TGG | + | chr5.2:7370556-7370575 | None:intergenic | 45.0% | |
| CATGCAGTACGCATCATGTA+AGG | + | chr5.2:7369109-7369128 | None:intergenic | 45.0% | |
| CTATTCCCACTAAGTGGGAT+GGG | + | chr5.2:7367081-7367100 | None:intergenic | 45.0% | |
| CTCTGACACAGATCAAAGCT+AGG | - | chr5.2:7370648-7370667 | MS.gene09596:CDS | 45.0% | |
| GAAGCTATCGTCTTTGTGGA+TGG | + | chr5.2:7370068-7370087 | None:intergenic | 45.0% | |
| GACAGGACACAACATAGACA+GGG | + | chr5.2:7366837-7366856 | None:intergenic | 45.0% | |
| GAGCCTCTGCTGTCTATTAT+TGG | + | chr5.2:7368751-7368770 | None:intergenic | 45.0% | |
| GATATCGGCAAGAAAGCCAA+AGG | - | chr5.2:7366022-7366041 | MS.gene09596:CDS | 45.0% | |
| GATTTGGCAAGAGTAGTACC+TGG | - | chr5.2:7367013-7367032 | MS.gene09596:intron | 45.0% | |
| GCGGTAATACCGACATTGTT+AGG | - | chr5.2:7367159-7367178 | MS.gene09596:intron | 45.0% | |
| GCTGTTGAAAGTTATCACGC+AGG | - | chr5.2:7368510-7368529 | MS.gene09596:intron | 45.0% | |
| TAAAACCATCCAAGCCTCCA+AGG | + | chr5.2:7368406-7368425 | None:intergenic | 45.0% | |
| TGGCCAATAATAGACAGCAG+AGG | - | chr5.2:7368745-7368764 | MS.gene09596:intron | 45.0% | |
| TTCTTAATGCCGTACTGCAG+CGG | - | chr5.2:7369541-7369560 | MS.gene09596:intron | 45.0% | |
| TTTCCAGACACAAAGCTTGG+AGG | + | chr5.2:7369646-7369665 | None:intergenic | 45.0% | |
| TTTCCTATCAGTGGCGACAA+GGG | - | chr5.2:7370494-7370513 | MS.gene09596:intron | 45.0% | |
| ! | CTTGGACAAGAGTTGAGTTG+AGG | - | chr5.2:7368239-7368258 | MS.gene09596:intron | 45.0% |
| ! | GCAACGTAGGCTTTTCAACT+TGG | - | chr5.2:7369380-7369399 | MS.gene09596:intron | 45.0% |
| ! | GGGTTGTATTGATCTGGAAG+AGG | + | chr5.2:7370025-7370044 | None:intergenic | 45.0% |
| ! | GTCACTTTAGTCCCTGAATG+AGG | - | chr5.2:7366424-7366443 | MS.gene09596:CDS | 45.0% |
| ! | TTCATGTAGCCGACTCAACT+TGG | + | chr5.2:7367308-7367327 | None:intergenic | 45.0% |
| ! | TTGGAGGCTTGGATGGTTTT+AGG | - | chr5.2:7368405-7368424 | MS.gene09596:intron | 45.0% |
| ! | TTTCCTCCAAGCTTTGTGTC+TGG | - | chr5.2:7369640-7369659 | MS.gene09596:intron | 45.0% |
| !! | AGCGGTTTGGTTCAACACAA+TGG | + | chr5.2:7367341-7367360 | None:intergenic | 45.0% |
| !! | AGTGCTGACTATTTCTGGTG+AGG | - | chr5.2:7370727-7370746 | MS.gene09596:intron | 45.0% |
| !! | CGGTTTGGTTCAACACAATG+GGG | + | chr5.2:7367339-7367358 | None:intergenic | 45.0% |
| !! | CTAGCTTTGATCTGTGTCAG+AGG | + | chr5.2:7370650-7370669 | None:intergenic | 45.0% |
| !! | GCCTGATTATAGTTCTGGCA+AGG | - | chr5.2:7370097-7370116 | MS.gene09596:intron | 45.0% |
| !! | GCGATAATGGATGGTTCGTA+GGG | + | chr5.2:7368156-7368175 | None:intergenic | 45.0% |
| !! | GCGGTTTGGTTCAACACAAT+GGG | + | chr5.2:7367340-7367359 | None:intergenic | 45.0% |
| !! | TGATTTGGTCTAGATGGTGG+AGG | + | chr5.2:7370541-7370560 | None:intergenic | 45.0% |
| !! | TGCGATAATGGATGGTTCGT+AGG | + | chr5.2:7368157-7368176 | None:intergenic | 45.0% |
| !! | TTCTGGTGAGGTTGATACCA+AGG | - | chr5.2:7370739-7370758 | MS.gene09596:intron | 45.0% |
| !!! | CAAGAAGAGTGCTGCTGTTT+TGG | - | chr5.2:7370559-7370578 | MS.gene09596:intron | 45.0% |
| AACATGAACCCGCTGCAGTA+CGG | + | chr5.2:7369553-7369572 | None:intergenic | 50.0% | |
| AAGAATGTGCTATGGTGCCC+AGG | - | chr5.2:7369736-7369755 | MS.gene09596:intron | 50.0% | |
| AAGGGTTGGAGAACCAACAG+TGG | + | chr5.2:7370288-7370307 | None:intergenic | 50.0% | |
| ACACACGACATGGAAGATCC+CGG | + | chr5.2:7367217-7367236 | None:intergenic | 50.0% | |
| ACCTGGATGTGTGACATCCT+AGG | - | chr5.2:7367030-7367049 | MS.gene09596:intron | 50.0% | |
| AGAATGTGCTATGGTGCCCA+GGG | - | chr5.2:7369737-7369756 | MS.gene09596:intron | 50.0% | |
| AGCAATGGCCAACCCAAACT+TGG | + | chr5.2:7370780-7370799 | None:intergenic | 50.0% | |
| AGGTTAAGGTAGCATGGTCG+TGG | + | chr5.2:7370223-7370242 | None:intergenic | 50.0% | |
| ATGCCAATGCGAGACTGACA+AGG | - | chr5.2:7368934-7368953 | MS.gene09596:intron | 50.0% | |
| CAGTGTAGCGACTGAGGTTA+AGG | + | chr5.2:7370237-7370256 | None:intergenic | 50.0% | |
| CCAAGCCTATTCCCACTAAG+TGG | + | chr5.2:7367087-7367106 | None:intergenic | 50.0% | |
| CCACTTAGTGGGAATAGGCT+TGG | - | chr5.2:7367084-7367103 | MS.gene09596:intron | 50.0% | |
| CCATCCCACTTAGTGGGAAT+AGG | - | chr5.2:7367079-7367098 | MS.gene09596:intron | 50.0% | |
| CCTATTCCCACTAAGTGGGA+TGG | + | chr5.2:7367082-7367101 | None:intergenic | 50.0% | |
| CGACTGAGGTTAAGGTAGCA+TGG | + | chr5.2:7370229-7370248 | None:intergenic | 50.0% | |
| CTTAGTGGGAATAGGCTTGG+TGG | - | chr5.2:7367087-7367106 | MS.gene09596:intron | 50.0% | |
| CTTTCCTATCAGTGGCGACA+AGG | - | chr5.2:7370493-7370512 | MS.gene09596:intron | 50.0% | |
| GAAAGGAGGACTCTCAACTG+GGG | - | chr5.2:7369865-7369884 | MS.gene09596:intron | 50.0% | |
| GCAATGGCCAACCCAAACTT+GGG | + | chr5.2:7370779-7370798 | None:intergenic | 50.0% | |
| GGTTCTCCAACCCTTGCATT+TGG | - | chr5.2:7370293-7370312 | MS.gene09596:intron | 50.0% | |
| GTGCAACACAAGGACTTCCT+AGG | + | chr5.2:7367050-7367069 | None:intergenic | 50.0% | |
| TCAAAAAACAGCGCCACCCT+TGG | - | chr5.2:7368386-7368405 | MS.gene09596:intron | 50.0% | |
| TCAGCACCAAATGCAAGGGT+TGG | + | chr5.2:7370302-7370321 | None:intergenic | 50.0% | |
| TCCTAGGATGTCACACATCC+AGG | + | chr5.2:7367034-7367053 | None:intergenic | 50.0% | |
| TCGGTATTACCGCTTGTGCT+AGG | + | chr5.2:7367152-7367171 | None:intergenic | 50.0% | |
| TCTTAATGCCGTACTGCAGC+GGG | - | chr5.2:7369542-7369561 | MS.gene09596:intron | 50.0% | |
| TGCCTCAGCACCAAATGCAA+GGG | + | chr5.2:7370306-7370325 | None:intergenic | 50.0% | |
| TTGCTTCAGTGTAGCGACTG+AGG | + | chr5.2:7370243-7370262 | None:intergenic | 50.0% | |
| ! | GTGTTGTCCTTGGTTCGAAC+CGG | - | chr5.2:7367195-7367214 | MS.gene09596:intron | 50.0% |
| ! | TGTAGCCGACTCAACTTGGA+TGG | + | chr5.2:7367304-7367323 | None:intergenic | 50.0% |
| ! | TGTTGTCCTTGGTTCGAACC+GGG | - | chr5.2:7367196-7367215 | MS.gene09596:intron | 50.0% |
| !! | AACCCTTGCATTTGGTGCTG+AGG | - | chr5.2:7370301-7370320 | MS.gene09596:intron | 50.0% |
| AAAAACAGCGCCACCCTTGG+AGG | - | chr5.2:7368389-7368408 | MS.gene09596:intron | 55.0% | |
| AGGACTCTCAACTGGGGATG+TGG | - | chr5.2:7369871-7369890 | MS.gene09596:intron | 55.0% | |
| CAACATAGACAGGGCGACAC+CGG | + | chr5.2:7366828-7366847 | None:intergenic | 55.0% | |
| CCGATATCGGAGTAGAGACC+CGG | + | chr5.2:7366010-7366029 | None:intergenic | 55.0% | |
| CCGGGTCTCTACTCCGATAT+CGG | - | chr5.2:7366007-7366026 | MS.gene09596:CDS | 55.0% | |
| CTCGTAAGGCCTAGCACAAG+CGG | - | chr5.2:7367140-7367159 | MS.gene09596:intron | 55.0% | |
| CTGCCTCAGCACCAAATGCA+AGG | + | chr5.2:7370307-7370326 | None:intergenic | 55.0% | |
| GCACCTTGTCAGTCTCGCAT+TGG | + | chr5.2:7368940-7368959 | None:intergenic | 55.0% | |
| TCACCCTTGTCGCCACTGAT+AGG | + | chr5.2:7370500-7370519 | None:intergenic | 55.0% | |
| TTCCCACTAAGTGGGATGGG+CGG | + | chr5.2:7367078-7367097 | None:intergenic | 55.0% | |
| TTGGGAAGAGCTCGTGCTGT+AGG | + | chr5.2:7370703-7370722 | None:intergenic | 55.0% | |
| ! | CAGCGGGTTCATGTTGAAGG+TGG | - | chr5.2:7369558-7369577 | MS.gene09596:intron | 55.0% |
| ! | CTGCAGCGGGTTCATGTTGA+AGG | - | chr5.2:7369555-7369574 | MS.gene09596:intron | 55.0% |
| ! | GAAGATCCCGGTTCGAACCA+AGG | + | chr5.2:7367205-7367224 | None:intergenic | 55.0% |
| !! | CGGTGCTACATAGCCGACAA+CGG | + | chr5.2:7366347-7366366 | None:intergenic | 55.0% |
| !! | CTTGCATTTGGTGCTGAGGC+AGG | - | chr5.2:7370305-7370324 | MS.gene09596:intron | 55.0% |
| !! | TGAGGTTGATACCAAGGCCC+TGG | - | chr5.2:7370745-7370764 | MS.gene09596:intron | 55.0% |
| !!! | GGGTTTTTTCTCCAGGGCCT+TGG | + | chr5.2:7370759-7370778 | None:intergenic | 55.0% |
| ACCATCCAAGCCTCCAAGGG+TGG | + | chr5.2:7368402-7368421 | None:intergenic | 60.0% | |
| CTCAGCTGAGTCGTGACCCT+GGG | + | chr5.2:7369756-7369775 | None:intergenic | 60.0% | |
| CTCTCAACTGGGGATGTGGC+AGG | - | chr5.2:7369875-7369894 | MS.gene09596:intron | 60.0% | |
| TCCCACTAAGTGGGATGGGC+GGG | + | chr5.2:7367077-7367096 | None:intergenic | 60.0% | |
| TCCCGCCCATCCCACTTAGT+GGG | - | chr5.2:7367073-7367092 | MS.gene09596:intron | 60.0% | |
| TCTCAGCTGAGTCGTGACCC+TGG | + | chr5.2:7369757-7369776 | None:intergenic | 60.0% | |
| CTAAGTGGGATGGGCGGGAG+AGG | + | chr5.2:7367072-7367091 | None:intergenic | 65.0% | |
| CTCCCGCCCATCCCACTTAG+TGG | - | chr5.2:7367072-7367091 | MS.gene09596:intron | 65.0% | |
| GCCACCCTTGGAGGCTTGGA+TGG | - | chr5.2:7368398-7368417 | MS.gene09596:intron | 65.0% | |
| ! | GGCGGGAGAGGTGCAACACA+AGG | + | chr5.2:7367060-7367079 | None:intergenic | 65.0% |
| CAGCGCCACCCTTGGAGGCT+TGG | - | chr5.2:7368394-7368413 | MS.gene09596:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 7365995 | 7370811 | 7365995 | ID=MS.gene09596 |
| chr5.2 | mRNA | 7365995 | 7370811 | 7365995 | ID=MS.gene09596.t1;Parent=MS.gene09596 |
| chr5.2 | exon | 7370763 | 7370811 | 7370763 | ID=MS.gene09596.t1.exon1;Parent=MS.gene09596.t1 |
| chr5.2 | CDS | 7370763 | 7370811 | 7370763 | ID=cds.MS.gene09596.t1;Parent=MS.gene09596.t1 |
| chr5.2 | exon | 7370612 | 7370679 | 7370612 | ID=MS.gene09596.t1.exon2;Parent=MS.gene09596.t1 |
| chr5.2 | CDS | 7370612 | 7370679 | 7370612 | ID=cds.MS.gene09596.t1;Parent=MS.gene09596.t1 |
| chr5.2 | exon | 7366854 | 7366964 | 7366854 | ID=MS.gene09596.t1.exon3;Parent=MS.gene09596.t1 |
| chr5.2 | CDS | 7366854 | 7366964 | 7366854 | ID=cds.MS.gene09596.t1;Parent=MS.gene09596.t1 |
| chr5.2 | exon | 7366688 | 7366774 | 7366688 | ID=MS.gene09596.t1.exon4;Parent=MS.gene09596.t1 |
| chr5.2 | CDS | 7366688 | 7366774 | 7366688 | ID=cds.MS.gene09596.t1;Parent=MS.gene09596.t1 |
| chr5.2 | exon | 7366395 | 7366603 | 7366395 | ID=MS.gene09596.t1.exon5;Parent=MS.gene09596.t1 |
| chr5.2 | CDS | 7366395 | 7366603 | 7366395 | ID=cds.MS.gene09596.t1;Parent=MS.gene09596.t1 |
| chr5.2 | exon | 7365995 | 7366301 | 7365995 | ID=MS.gene09596.t1.exon6;Parent=MS.gene09596.t1 |
| chr5.2 | CDS | 7365995 | 7366301 | 7365995 | ID=cds.MS.gene09596.t1;Parent=MS.gene09596.t1 |
| Gene Sequence |
| Protein sequence |
