Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09621.t1 | XP_024639419.1 | 89.7 | 390 | 38 | 2 | 1 | 390 | 1 | 388 | 6.90E-195 | 689.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09621.t1 | Q84Z02 | 89.6 | 144 | 11 | 2 | 247 | 390 | 281 | 420 | 1.7e-69 | 264.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09621.t1 | G7K2E7 | 89.5 | 390 | 38 | 3 | 1 | 390 | 1 | 387 | 3.6e-193 | 683.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene09621.t1 | TF | AP2/ERF-ERF |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051018 | MS.gene09621 | 0.81768 | 2.91E-52 | -1.69E-46 |
MS.gene05157 | MS.gene09621 | 0.803058 | 4.18E-49 | -1.69E-46 |
MS.gene051719 | MS.gene09621 | 0.828679 | 7.86E-55 | -1.69E-46 |
MS.gene051720 | MS.gene09621 | 0.831612 | 1.51E-55 | -1.69E-46 |
MS.gene053144 | MS.gene09621 | 0.831898 | 1.29E-55 | -1.69E-46 |
MS.gene053536 | MS.gene09621 | 0.804696 | 1.91E-49 | -1.69E-46 |
MS.gene053538 | MS.gene09621 | 0.80001 | 1.76E-48 | -1.69E-46 |
MS.gene054584 | MS.gene09621 | 0.826599 | 2.48E-54 | -1.69E-46 |
MS.gene055465 | MS.gene09621 | 0.823843 | 1.11E-53 | -1.69E-46 |
MS.gene055466 | MS.gene09621 | 0.815224 | 1.03E-51 | -1.69E-46 |
MS.gene055468 | MS.gene09621 | 0.803282 | 3.75E-49 | -1.69E-46 |
MS.gene055537 | MS.gene09621 | 0.830551 | 2.76E-55 | -1.69E-46 |
MS.gene055580 | MS.gene09621 | -0.801597 | 8.35E-49 | -1.69E-46 |
MS.gene056005 | MS.gene09621 | 0.800417 | 1.46E-48 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09621.t1 | MTR_5g015070 | 94.103 | 390 | 20 | 3 | 1 | 390 | 1 | 387 | 0.0 | 733 |
MS.gene09621.t1 | MTR_4g097520 | 49.787 | 470 | 131 | 18 | 1 | 390 | 1 | 445 | 8.11e-116 | 351 |
MS.gene09621.t1 | MTR_3g103460 | 46.845 | 412 | 152 | 12 | 35 | 390 | 45 | 445 | 1.44e-100 | 312 |
MS.gene09621.t1 | MTR_1g017400 | 50.700 | 357 | 112 | 13 | 67 | 390 | 122 | 447 | 4.00e-94 | 295 |
MS.gene09621.t1 | MTR_4g127930 | 84.028 | 144 | 22 | 1 | 247 | 390 | 155 | 297 | 5.40e-87 | 273 |
MS.gene09621.t1 | MTR_2g098180 | 84.722 | 144 | 21 | 1 | 247 | 390 | 163 | 305 | 1.14e-85 | 270 |
MS.gene09621.t1 | MTR_4g065370 | 68.783 | 189 | 46 | 3 | 202 | 390 | 126 | 301 | 1.92e-85 | 270 |
MS.gene09621.t1 | MTR_7g080460 | 67.337 | 199 | 44 | 3 | 199 | 390 | 213 | 397 | 7.00e-84 | 270 |
MS.gene09621.t1 | MTR_8g020510 | 85.417 | 144 | 17 | 2 | 247 | 390 | 244 | 383 | 3.02e-83 | 265 |
MS.gene09621.t1 | MTR_8g020510 | 37.234 | 94 | 50 | 2 | 231 | 324 | 328 | 412 | 6.67e-11 | 64.3 |
MS.gene09621.t1 | MTR_5g031880 | 80.986 | 142 | 23 | 2 | 247 | 388 | 220 | 357 | 1.91e-78 | 251 |
MS.gene09621.t1 | MTR_8g068510 | 74.000 | 150 | 35 | 2 | 241 | 390 | 121 | 266 | 4.04e-74 | 236 |
MS.gene09621.t1 | MTR_4g130270 | 71.631 | 141 | 39 | 1 | 250 | 390 | 46 | 185 | 7.55e-67 | 216 |
MS.gene09621.t1 | MTR_8g044070 | 63.636 | 154 | 50 | 3 | 239 | 390 | 41 | 190 | 1.57e-59 | 199 |
MS.gene09621.t1 | MTR_8g044070 | 36.522 | 115 | 59 | 2 | 215 | 329 | 124 | 224 | 1.19e-12 | 69.3 |
MS.gene09621.t1 | MTR_7g009410 | 65.957 | 141 | 44 | 2 | 250 | 390 | 64 | 200 | 5.74e-58 | 194 |
MS.gene09621.t1 | MTR_7g009410 | 37.255 | 102 | 55 | 2 | 228 | 329 | 142 | 234 | 9.93e-12 | 66.2 |
MS.gene09621.t1 | MTR_6g011490 | 55.367 | 177 | 75 | 2 | 214 | 390 | 24 | 196 | 3.72e-56 | 189 |
MS.gene09621.t1 | MTR_6g011490 | 36.275 | 102 | 56 | 2 | 228 | 329 | 138 | 230 | 2.26e-11 | 65.1 |
MS.gene09621.t1 | MTR_2g460730 | 67.376 | 141 | 42 | 2 | 250 | 390 | 46 | 182 | 2.29e-54 | 184 |
MS.gene09621.t1 | MTR_4g007770 | 66.667 | 141 | 43 | 2 | 250 | 390 | 35 | 171 | 5.69e-53 | 179 |
MS.gene09621.t1 | MTR_8g044040 | 57.386 | 176 | 65 | 4 | 221 | 390 | 20 | 191 | 1.03e-52 | 180 |
MS.gene09621.t1 | MTR_8g044040 | 37.895 | 95 | 51 | 1 | 242 | 336 | 146 | 232 | 1.97e-11 | 65.5 |
MS.gene09621.t1 | MTR_8g468920 | 65.248 | 141 | 45 | 2 | 250 | 390 | 68 | 204 | 5.12e-50 | 173 |
MS.gene09621.t1 | MTR_7g091390 | 62.879 | 132 | 40 | 2 | 249 | 380 | 55 | 177 | 1.28e-41 | 151 |
MS.gene09621.t1 | MTR_4g061200 | 52.593 | 135 | 52 | 3 | 254 | 388 | 131 | 253 | 2.05e-32 | 126 |
MS.gene09621.t1 | MTR_4g094868 | 52.555 | 137 | 53 | 3 | 254 | 390 | 176 | 300 | 3.79e-32 | 127 |
MS.gene09621.t1 | MTR_4g094868 | 52.555 | 137 | 53 | 3 | 254 | 390 | 176 | 300 | 3.86e-32 | 127 |
MS.gene09621.t1 | MTR_5g016810 | 52.555 | 137 | 53 | 3 | 254 | 390 | 152 | 276 | 9.31e-32 | 126 |
MS.gene09621.t1 | MTR_4g061200 | 52.593 | 135 | 52 | 3 | 254 | 388 | 131 | 253 | 1.21e-31 | 125 |
MS.gene09621.t1 | MTR_7g100590 | 51.852 | 135 | 53 | 3 | 254 | 388 | 139 | 261 | 2.22e-31 | 124 |
MS.gene09621.t1 | MTR_7g100590 | 40.000 | 95 | 48 | 2 | 234 | 328 | 211 | 296 | 6.11e-11 | 64.3 |
MS.gene09621.t1 | MTR_2g093060 | 52.593 | 135 | 52 | 3 | 254 | 388 | 134 | 256 | 3.42e-31 | 124 |
MS.gene09621.t1 | MTR_2g093060 | 52.593 | 135 | 52 | 3 | 254 | 388 | 134 | 256 | 3.63e-31 | 124 |
MS.gene09621.t1 | MTR_4g061200 | 52.344 | 128 | 49 | 3 | 254 | 381 | 131 | 246 | 1.29e-29 | 118 |
MS.gene09621.t1 | MTR_5g016810 | 49.650 | 143 | 54 | 4 | 254 | 390 | 152 | 282 | 4.59e-29 | 118 |
MS.gene09621.t1 | MTR_4g061200 | 52.344 | 128 | 49 | 3 | 254 | 381 | 131 | 246 | 8.62e-29 | 117 |
MS.gene09621.t1 | MTR_2g093060 | 52.344 | 128 | 49 | 3 | 254 | 381 | 134 | 249 | 2.61e-28 | 115 |
MS.gene09621.t1 | MTR_7g091390 | 62.366 | 93 | 29 | 1 | 288 | 380 | 3 | 89 | 1.74e-24 | 102 |
MS.gene09621.t1 | MTR_4g094868 | 53.774 | 106 | 47 | 1 | 285 | 390 | 41 | 144 | 3.45e-24 | 102 |
MS.gene09621.t1 | MTR_7g061190 | 47.573 | 103 | 52 | 1 | 286 | 388 | 3 | 103 | 2.21e-19 | 84.7 |
MS.gene09621.t1 | MTR_7g061190 | 40.000 | 95 | 48 | 2 | 234 | 328 | 53 | 138 | 1.02e-11 | 63.2 |
MS.gene09621.t1 | MTR_1g049140 | 47.321 | 112 | 48 | 3 | 251 | 362 | 134 | 234 | 4.86e-18 | 83.6 |
MS.gene09621.t1 | MTR_1g049140 | 47.321 | 112 | 48 | 3 | 251 | 362 | 134 | 234 | 1.30e-17 | 84.0 |
MS.gene09621.t1 | MTR_1g049140 | 47.321 | 112 | 48 | 3 | 251 | 362 | 134 | 234 | 2.22e-17 | 82.8 |
MS.gene09621.t1 | MTR_3g090510 | 47.423 | 97 | 49 | 1 | 292 | 388 | 163 | 257 | 8.55e-15 | 75.9 |
MS.gene09621.t1 | MTR_7g060560 | 45.361 | 97 | 50 | 2 | 292 | 388 | 156 | 249 | 6.37e-13 | 70.1 |
MS.gene09621.t1 | MTR_1g090290 | 40.964 | 83 | 39 | 3 | 240 | 322 | 100 | 172 | 5.04e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09621.t1 | AT4G37750 | 46.701 | 394 | 111 | 13 | 55 | 390 | 66 | 418 | 1.79e-91 | 286 |
MS.gene09621.t1 | AT1G51190 | 68.878 | 196 | 50 | 3 | 195 | 390 | 141 | 325 | 6.24e-88 | 277 |
MS.gene09621.t1 | AT5G57390 | 83.333 | 150 | 23 | 2 | 241 | 390 | 73 | 220 | 1.76e-87 | 272 |
MS.gene09621.t1 | AT5G57390 | 83.333 | 150 | 23 | 2 | 241 | 390 | 191 | 338 | 1.88e-86 | 273 |
MS.gene09621.t1 | AT1G72570 | 65.979 | 194 | 59 | 2 | 203 | 390 | 166 | 358 | 1.52e-85 | 266 |
MS.gene09621.t1 | AT3G20840 | 84.722 | 144 | 21 | 1 | 247 | 390 | 174 | 316 | 2.24e-85 | 270 |
MS.gene09621.t1 | AT5G17430 | 84.828 | 145 | 21 | 1 | 246 | 390 | 140 | 283 | 6.07e-84 | 265 |
MS.gene09621.t1 | AT5G17430 | 84.828 | 145 | 21 | 1 | 246 | 390 | 202 | 345 | 1.23e-83 | 266 |
MS.gene09621.t1 | AT5G65510 | 74.214 | 159 | 40 | 1 | 230 | 388 | 149 | 306 | 1.93e-83 | 257 |
MS.gene09621.t1 | AT5G65510 | 74.214 | 159 | 40 | 1 | 230 | 388 | 149 | 306 | 1.59e-81 | 256 |
MS.gene09621.t1 | AT5G65510 | 74.214 | 159 | 40 | 1 | 230 | 388 | 207 | 364 | 2.48e-81 | 258 |
MS.gene09621.t1 | AT5G65510 | 74.214 | 159 | 40 | 1 | 230 | 388 | 207 | 364 | 2.48e-81 | 258 |
MS.gene09621.t1 | AT5G10510 | 81.690 | 142 | 25 | 1 | 247 | 388 | 223 | 363 | 2.67e-80 | 256 |
MS.gene09621.t1 | AT5G10510 | 81.690 | 142 | 25 | 1 | 247 | 388 | 223 | 363 | 2.67e-80 | 256 |
MS.gene09621.t1 | AT5G10510 | 81.690 | 142 | 25 | 1 | 247 | 388 | 246 | 386 | 4.95e-80 | 256 |
MS.gene09621.t1 | AT5G10510 | 81.690 | 142 | 25 | 1 | 247 | 388 | 261 | 401 | 6.20e-80 | 256 |
MS.gene09621.t1 | AT5G10510 | 81.690 | 142 | 25 | 1 | 247 | 388 | 261 | 401 | 6.20e-80 | 256 |
MS.gene09621.t1 | AT5G10510 | 79.577 | 142 | 25 | 2 | 247 | 388 | 223 | 360 | 9.57e-76 | 244 |
MS.gene09621.t1 | AT5G10510 | 69.753 | 162 | 28 | 2 | 247 | 388 | 261 | 421 | 1.13e-72 | 238 |
MS.gene09621.t1 | AT3G54320 | 69.504 | 141 | 42 | 1 | 250 | 390 | 61 | 200 | 1.15e-62 | 207 |
MS.gene09621.t1 | AT3G54320 | 69.504 | 141 | 42 | 1 | 250 | 390 | 61 | 200 | 1.50e-62 | 207 |
MS.gene09621.t1 | AT1G79700 | 66.667 | 141 | 46 | 1 | 250 | 390 | 48 | 187 | 2.99e-55 | 184 |
MS.gene09621.t1 | AT1G16060 | 65.957 | 141 | 47 | 1 | 250 | 390 | 54 | 193 | 2.77e-53 | 180 |
MS.gene09621.t1 | AT1G79700 | 66.406 | 128 | 42 | 1 | 250 | 377 | 48 | 174 | 4.72e-49 | 168 |
MS.gene09621.t1 | AT2G41710 | 63.910 | 133 | 42 | 1 | 247 | 379 | 63 | 189 | 3.04e-45 | 161 |
MS.gene09621.t1 | AT2G41710 | 63.910 | 133 | 42 | 1 | 247 | 379 | 63 | 189 | 4.99e-45 | 161 |
MS.gene09621.t1 | AT2G41710 | 61.594 | 138 | 42 | 2 | 247 | 379 | 63 | 194 | 9.30e-43 | 155 |
MS.gene09621.t1 | AT3G54320 | 69.903 | 103 | 30 | 1 | 288 | 390 | 33 | 134 | 1.09e-42 | 153 |
MS.gene09621.t1 | AT3G54320 | 69.903 | 103 | 30 | 1 | 288 | 390 | 33 | 134 | 1.09e-42 | 153 |
MS.gene09621.t1 | AT2G41710 | 62.295 | 122 | 40 | 1 | 258 | 379 | 109 | 224 | 1.13e-38 | 144 |
MS.gene09621.t1 | AT1G79700 | 66.019 | 103 | 34 | 1 | 288 | 390 | 10 | 111 | 2.94e-34 | 127 |
MS.gene09621.t1 | AT1G16060 | 62.385 | 109 | 40 | 1 | 282 | 390 | 16 | 123 | 1.05e-32 | 124 |
MS.gene09621.t1 | AT1G79700 | 64.356 | 101 | 35 | 1 | 290 | 390 | 6 | 105 | 2.38e-32 | 122 |
MS.gene09621.t1 | AT2G28550 | 51.111 | 135 | 54 | 3 | 254 | 388 | 153 | 275 | 4.30e-32 | 124 |
MS.gene09621.t1 | AT4G36920 | 51.825 | 137 | 54 | 3 | 254 | 390 | 131 | 255 | 1.63e-31 | 124 |
MS.gene09621.t1 | AT4G36920 | 51.825 | 137 | 54 | 3 | 254 | 390 | 131 | 255 | 1.63e-31 | 124 |
MS.gene09621.t1 | AT2G28550 | 51.111 | 135 | 54 | 3 | 254 | 388 | 153 | 275 | 1.11e-30 | 122 |
MS.gene09621.t1 | AT2G28550 | 38.947 | 95 | 49 | 2 | 234 | 328 | 225 | 310 | 9.96e-11 | 63.5 |
MS.gene09621.t1 | AT5G67180 | 50.365 | 137 | 56 | 3 | 254 | 390 | 96 | 220 | 3.06e-30 | 118 |
MS.gene09621.t1 | AT5G67180 | 50.365 | 137 | 56 | 3 | 254 | 390 | 96 | 220 | 3.79e-30 | 117 |
MS.gene09621.t1 | AT5G67180 | 50.365 | 137 | 56 | 3 | 254 | 390 | 96 | 220 | 5.44e-30 | 116 |
MS.gene09621.t1 | AT5G67180 | 50.365 | 137 | 56 | 3 | 254 | 390 | 96 | 220 | 9.45e-30 | 118 |
MS.gene09621.t1 | AT2G28550 | 50.781 | 128 | 51 | 3 | 254 | 381 | 153 | 268 | 1.98e-29 | 115 |
MS.gene09621.t1 | AT2G28550 | 50.781 | 128 | 51 | 3 | 254 | 381 | 153 | 268 | 1.98e-29 | 115 |
MS.gene09621.t1 | AT2G28550 | 50.781 | 128 | 51 | 3 | 254 | 381 | 153 | 268 | 7.77e-28 | 114 |
MS.gene09621.t1 | AT2G39250 | 39.865 | 148 | 78 | 3 | 228 | 374 | 81 | 218 | 6.11e-27 | 107 |
MS.gene09621.t1 | AT2G39250 | 40.136 | 147 | 77 | 3 | 228 | 373 | 81 | 217 | 2.39e-26 | 108 |
MS.gene09621.t1 | AT5G60120 | 46.923 | 130 | 57 | 3 | 251 | 380 | 157 | 274 | 2.04e-22 | 98.6 |
MS.gene09621.t1 | AT5G60120 | 46.923 | 130 | 57 | 3 | 251 | 380 | 157 | 274 | 2.04e-22 | 98.6 |
MS.gene09621.t1 | AT5G60120 | 46.923 | 130 | 57 | 3 | 251 | 380 | 157 | 274 | 2.04e-22 | 98.6 |
MS.gene09621.t1 | AT5G60120 | 46.923 | 130 | 57 | 3 | 251 | 380 | 157 | 274 | 2.58e-22 | 98.6 |
MS.gene09621.t1 | AT5G60120 | 46.923 | 130 | 57 | 3 | 251 | 380 | 157 | 274 | 2.81e-22 | 98.6 |
MS.gene09621.t1 | AT5G60120 | 46.923 | 130 | 57 | 3 | 251 | 380 | 157 | 274 | 3.17e-22 | 98.6 |
MS.gene09621.t1 | AT3G54990 | 48.598 | 107 | 45 | 2 | 254 | 360 | 122 | 218 | 8.47e-22 | 94.0 |
MS.gene09621.t1 | AT3G54990 | 48.148 | 108 | 46 | 2 | 254 | 361 | 122 | 219 | 5.34e-21 | 93.6 |
MS.gene09621.t1 | AT3G54320 | 68.333 | 60 | 18 | 1 | 331 | 390 | 1 | 59 | 2.30e-19 | 87.8 |
MS.gene09621.t1 | AT1G16060 | 65.000 | 60 | 20 | 1 | 331 | 390 | 1 | 59 | 5.67e-19 | 85.1 |
MS.gene09621.t1 | AT1G16060 | 65.000 | 60 | 20 | 1 | 331 | 390 | 1 | 59 | 5.67e-19 | 85.1 |
MS.gene09621.t1 | AT1G16060 | 65.000 | 60 | 20 | 1 | 331 | 390 | 1 | 59 | 5.67e-19 | 85.1 |
MS.gene09621.t1 | AT1G16060 | 65.000 | 60 | 20 | 1 | 331 | 390 | 1 | 59 | 5.67e-19 | 85.1 |
MS.gene09621.t1 | AT2G28550 | 47.872 | 94 | 47 | 1 | 288 | 381 | 11 | 102 | 3.81e-17 | 81.3 |
Find 81 sgRNAs with CRISPR-Local
Find 137 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATTCTCTTGTACATGATTT+AGG | 0.152119 | 5.2:+7044478 | None:intergenic |
ATTTCATCCTCAACTATATT+TGG | 0.179003 | 5.2:+7044330 | None:intergenic |
GCTTACTTGCATTTCTTCTT+TGG | 0.217497 | 5.2:+7044557 | None:intergenic |
CATAACTATGGATATTACTA+TGG | 0.312407 | 5.2:-7044779 | MS.gene09621:CDS |
GTAGATATGAAGCTCATCTA+TGG | 0.319596 | 5.2:-7043792 | MS.gene09621:CDS |
GCAATGGGAATCTCTCATTA+TGG | 0.348044 | 5.2:-7044588 | MS.gene09621:CDS |
GGAAATAAAGATCTCTATCT+TGG | 0.352592 | 5.2:-7042898 | MS.gene09621:CDS |
CCTACACCTCTTCATAACTA+TGG | 0.352711 | 5.2:-7044791 | MS.gene09621:CDS |
AACATGAGAGTTGTTGCTTC+TGG | 0.354947 | 5.2:+7044427 | None:intergenic |
CAAGAGAATACGAGCCTGTT+GGG | 0.358991 | 5.2:-7044465 | MS.gene09621:CDS |
TATGGCTGCACTCAAGTATT+GGG | 0.360270 | 5.2:-7043400 | MS.gene09621:CDS |
TTTAGGTTATTCAAATTGTT+TGG | 0.361139 | 5.2:+7044495 | None:intergenic |
TTCTCTTCACAAATGAATAT+AGG | 0.368739 | 5.2:-7044866 | MS.gene09621:CDS |
ATGTTCTTTGCCCAAAGGTT+TGG | 0.385434 | 5.2:+7044103 | None:intergenic |
CTTGCCACCTTCCATGTTGA+TGG | 0.386912 | 5.2:+7042941 | None:intergenic |
AATGATTCCTCAGTTTATCT+AGG | 0.395063 | 5.2:-7043561 | MS.gene09621:intron |
AAGAATCAGAACCAAACCTT+TGG | 0.415358 | 5.2:-7044114 | MS.gene09621:CDS |
GGAAGGTGGCAAGCTCGAAT+AGG | 0.415431 | 5.2:-7042931 | MS.gene09621:CDS |
GCTCGAATAGGGAGAGTTGC+TGG | 0.417556 | 5.2:-7042919 | MS.gene09621:CDS |
TTGGCTCATGGTATGAAGTT+TGG | 0.418171 | 5.2:+7044514 | None:intergenic |
AGCTGCAAGAGCTTATGATA+TGG | 0.426373 | 5.2:-7043418 | MS.gene09621:CDS |
GAAGGTGGCAAGCTCGAATA+GGG | 0.444273 | 5.2:-7042930 | MS.gene09621:CDS |
GCTCCGCAAGACTCCCCAAC+AGG | 0.449171 | 5.2:+7044451 | None:intergenic |
AGTCTTGAAGATGAAGTTCA+TGG | 0.451972 | 5.2:-7044948 | None:intergenic |
ATCTAAGGAGATGGGTATCA+AGG | 0.454082 | 5.2:-7044302 | MS.gene09621:CDS |
CACATTATCGTTTCTTAAGA+CGG | 0.469666 | 5.2:+7044401 | None:intergenic |
ATATGGCTGCACTCAAGTAT+TGG | 0.471306 | 5.2:-7043401 | MS.gene09621:CDS |
AACAGCTTCAGCAGCAGTAG+TGG | 0.475357 | 5.2:+7044835 | None:intergenic |
CCTTGTTACTCCTCTATACA+TGG | 0.477522 | 5.2:+7043061 | None:intergenic |
AGAATCAGAACCAAACCTTT+GGG | 0.481711 | 5.2:-7044113 | MS.gene09621:CDS |
TATTCAAATTGTTTGGCTCA+TGG | 0.483216 | 5.2:+7044502 | None:intergenic |
GCTGCTGAAGCTGTTCCAAC+AGG | 0.484113 | 5.2:-7044827 | MS.gene09621:CDS |
CCTCAACTATATTTGGTAGC+TGG | 0.484593 | 5.2:+7044337 | None:intergenic |
ACACAGCTTGATTGTGAGCT+AGG | 0.489113 | 5.2:+7044219 | None:intergenic |
AATACGTTGCTCATTTAAGA+AGG | 0.490643 | 5.2:-7043196 | MS.gene09621:intron |
TCAACGGAAGCAGAATCAAT+AGG | 0.498341 | 5.2:+7044174 | None:intergenic |
ATAGTTGGAAAATTATCAAA+AGG | 0.505989 | 5.2:-7043252 | MS.gene09621:intron |
GATGAAAAGGAAGCATCAAA+TGG | 0.506107 | 5.2:-7044148 | MS.gene09621:CDS |
AAAGAGGGCCAAGCTAGAAA+AGG | 0.510100 | 5.2:-7043754 | MS.gene09621:CDS |
TTTATCAGACATAGGTGGAC+AGG | 0.517511 | 5.2:-7043814 | MS.gene09621:intron |
AACGATAATGTGATCTTAGA+CGG | 0.518135 | 5.2:-7044390 | MS.gene09621:CDS |
CAAAGAACATCTCAATATAG+AGG | 0.525445 | 5.2:-7044090 | MS.gene09621:CDS |
CTTCCGTTGATACGATGAAA+AGG | 0.528267 | 5.2:-7044161 | MS.gene09621:CDS |
TGGAAAATTTATACGAGTGG+AGG | 0.535662 | 5.2:+7043374 | None:intergenic |
GCCTTGCCCATCATGCATGA+TGG | 0.542542 | 5.2:-7044725 | MS.gene09621:CDS |
AGAGGGGCTTCCATGTATAG+AGG | 0.543527 | 5.2:-7043071 | MS.gene09621:CDS |
TACTGGAAAATTTATACGAG+TGG | 0.545226 | 5.2:+7043371 | None:intergenic |
TTGAGATGTTCTTTGCCCAA+AGG | 0.546617 | 5.2:+7044098 | None:intergenic |
TGTAAAATCAGGAAAAGTAG+TGG | 0.560031 | 5.2:-7043101 | MS.gene09621:intron |
TTGTGATCCATCATGCATGA+TGG | 0.561120 | 5.2:+7044718 | None:intergenic |
TAGATATGAAGCTCATCTAT+GGG | 0.566225 | 5.2:-7043791 | MS.gene09621:CDS |
GGTTGATAATAAAAGCCTGT+TGG | 0.572958 | 5.2:+7044812 | None:intergenic |
GGAAAATTTATACGAGTGGA+GGG | 0.573107 | 5.2:+7043375 | None:intergenic |
CCATAGTTATGAAGAGGTGT+AGG | 0.575108 | 5.2:+7044791 | None:intergenic |
GCTTCAGCAGCAGTAGTGGA+AGG | 0.581457 | 5.2:+7044839 | None:intergenic |
GAAGTTCATGGAAAATATTG+AGG | 0.582271 | 5.2:-7044936 | MS.gene09621:CDS |
ACGATAATGTGATCTTAGAC+GGG | 0.584490 | 5.2:-7044389 | MS.gene09621:CDS |
AAAGTAGTGGATTCTCAAGA+GGG | 0.589213 | 5.2:-7043088 | MS.gene09621:CDS |
ACAAGAGAATACGAGCCTGT+TGG | 0.589238 | 5.2:-7044466 | MS.gene09621:CDS |
TGTGATCCATCATGCATGAT+GGG | 0.592730 | 5.2:+7044719 | None:intergenic |
GAGCCTGTTGGGGAGTCTTG+CGG | 0.593013 | 5.2:-7044454 | MS.gene09621:CDS |
GGTTATGAAAGTGAACATGT+TGG | 0.604732 | 5.2:-7044758 | MS.gene09621:CDS |
TAATATCCATAGTTATGAAG+AGG | 0.606260 | 5.2:+7044785 | None:intergenic |
TCTAAGGAGATGGGTATCAA+GGG | 0.607562 | 5.2:-7044301 | MS.gene09621:CDS |
CAAGCTAGAAAAGGAAAGCA+AGG | 0.608427 | 5.2:-7043745 | MS.gene09621:intron |
CTCAATATAGAGGTGTAACA+AGG | 0.612520 | 5.2:-7044080 | MS.gene09621:intron |
AAATTATCAAAAGGAACTTG+AGG | 0.613334 | 5.2:-7043243 | MS.gene09621:CDS |
AAAAGTAGTGGATTCTCAAG+AGG | 0.615091 | 5.2:-7043089 | MS.gene09621:CDS |
AAGAGAATACGAGCCTGTTG+GGG | 0.620765 | 5.2:-7044464 | MS.gene09621:CDS |
CCAGCTACCAAATATAGTTG+AGG | 0.626449 | 5.2:-7044337 | MS.gene09621:CDS |
GTGTATTTGACACTTGTGCA+TGG | 0.627663 | 5.2:+7044259 | None:intergenic |
TCCATCATGCATGATGGGCA+AGG | 0.639163 | 5.2:+7044724 | None:intergenic |
GCAGACACCATCAACATGGA+AGG | 0.640576 | 5.2:-7042948 | MS.gene09621:CDS |
CCATGTATAGAGGAGTAACA+AGG | 0.642280 | 5.2:-7043061 | MS.gene09621:intron |
GACACCATCAACATGGAAGG+TGG | 0.644993 | 5.2:-7042945 | MS.gene09621:CDS |
GTTGGTTTATCAGACATAGG+TGG | 0.647177 | 5.2:-7043819 | MS.gene09621:intron |
CATGATGGATCACAAGCACA+AGG | 0.647359 | 5.2:-7044710 | MS.gene09621:intron |
ATGGCTGCACTCAAGTATTG+GGG | 0.648728 | 5.2:-7043399 | MS.gene09621:CDS |
TGTAGCAGACACCATCAACA+TGG | 0.652346 | 5.2:-7042952 | MS.gene09621:intron |
TGATTGTGAGCTAGGACTCG+CGG | 0.676952 | 5.2:+7044227 | None:intergenic |
AAGTAGTGGATTCTCAAGAG+GGG | 0.719782 | 5.2:-7043087 | MS.gene09621:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAGAATATAACAAATAT+TGG | + | chr5.2:7042496-7042515 | None:intergenic | 10.0% |
!!! | TTTTAACTAATAAAATACAA+TGG | - | chr5.2:7044613-7044632 | MS.gene09621:intron | 10.0% |
!! | ATATCATTTCTCAAATATAT+TGG | + | chr5.2:7044354-7044373 | None:intergenic | 15.0% |
!!! | AATCAAAATAGTAACATTTT+TGG | - | chr5.2:7042273-7042292 | MS.gene09621:intron | 15.0% |
!!! | CAAATTTTTTCACAATATAA+AGG | + | chr5.2:7043213-7043232 | None:intergenic | 15.0% |
!!! | CTATATATGATTTTAAATTG+CGG | - | chr5.2:7043169-7043188 | MS.gene09621:intron | 15.0% |
!!! | GATTTTACAAAGTTAAATTA+TGG | + | chr5.2:7044057-7044076 | None:intergenic | 15.0% |
!!! | TAAGTTTTTTTTGTACAAAT+GGG | + | chr5.2:7044686-7044705 | None:intergenic | 15.0% |
!!! | TAATTTAACTTTGTAAAATC+AGG | - | chr5.2:7044057-7044076 | MS.gene09621:intron | 15.0% |
!!! | TATTTGAGAAATGATATTTT+TGG | - | chr5.2:7044357-7044376 | MS.gene09621:CDS | 15.0% |
!!! | TTAAGTTTTTTTTGTACAAA+TGG | + | chr5.2:7044687-7044706 | None:intergenic | 15.0% |
!! | AAAATATACACACATAAAAG+AGG | + | chr5.2:7043474-7043493 | None:intergenic | 20.0% |
!! | AAATGTACATTCAATATAAG+AGG | + | chr5.2:7044832-7044851 | None:intergenic | 20.0% |
!! | ACAAAAACATTCTTAACATT+TGG | + | chr5.2:7043642-7043661 | None:intergenic | 20.0% |
!! | ATAGTTGGAAAATTATCAAA+AGG | - | chr5.2:7043917-7043936 | MS.gene09621:intron | 20.0% |
!! | ATCTCATGATAATATATAGT+TGG | - | chr5.2:7043902-7043921 | MS.gene09621:intron | 20.0% |
!! | GTTTATAAACCATTTAACAT+TGG | + | chr5.2:7044507-7044526 | None:intergenic | 20.0% |
!! | TATAATAATACTTAGGAAGA+GGG | - | chr5.2:7044864-7044883 | MS.gene09621:CDS | 20.0% |
!! | TTATAATAATACTTAGGAAG+AGG | - | chr5.2:7044863-7044882 | MS.gene09621:CDS | 20.0% |
!!! | ACTTTTAATAATGTGACAAA+AGG | + | chr5.2:7043132-7043151 | None:intergenic | 20.0% |
!!! | CTTTTATGTGTGTATATTTT+TGG | - | chr5.2:7043474-7043493 | MS.gene09621:intron | 20.0% |
!!! | TGGTTTTGTATATTAACATA+TGG | + | chr5.2:7044037-7044056 | None:intergenic | 20.0% |
!!! | TGTTACTATTTTGATTGTTT+AGG | + | chr5.2:7042269-7042288 | None:intergenic | 20.0% |
!!! | TTTAGGTTATTCAAATTGTT+TGG | + | chr5.2:7042677-7042696 | None:intergenic | 20.0% |
! | AAAATGTGTCAAATACACAA+GGG | + | chr5.2:7044597-7044616 | None:intergenic | 25.0% |
! | AAATTATCAAAAGGAACTTG+AGG | - | chr5.2:7043926-7043945 | MS.gene09621:intron | 25.0% |
! | AACTATTTATGTGTAGCAAT+GGG | - | chr5.2:7042566-7042585 | MS.gene09621:intron | 25.0% |
! | AATTGTAGTCTGCAATATAA+AGG | + | chr5.2:7043279-7043298 | None:intergenic | 25.0% |
! | ACTTGAAAAGATTAGATTGA+TGG | - | chr5.2:7044800-7044819 | MS.gene09621:CDS | 25.0% |
! | ATTTCATCCTCAACTATATT+TGG | + | chr5.2:7042842-7042861 | None:intergenic | 25.0% |
! | CATAACTATGGATATTACTA+TGG | - | chr5.2:7042390-7042409 | MS.gene09621:intron | 25.0% |
! | GCAAAGAATTTAATCATTAC+TGG | + | chr5.2:7043818-7043837 | None:intergenic | 25.0% |
! | TAAAATGTGTCAAATACACA+AGG | + | chr5.2:7044598-7044617 | None:intergenic | 25.0% |
! | TAACTATTTATGTGTAGCAA+TGG | - | chr5.2:7042565-7042584 | MS.gene09621:intron | 25.0% |
! | TAATATCCATAGTTATGAAG+AGG | + | chr5.2:7042387-7042406 | None:intergenic | 25.0% |
! | TATTCTCTTGTACATGATTT+AGG | + | chr5.2:7042694-7042713 | None:intergenic | 25.0% |
! | TTCTCTTCACAAATGAATAT+AGG | - | chr5.2:7042303-7042322 | MS.gene09621:intron | 25.0% |
!! | AAATTTTTGATCTAAGGAGA+TGG | - | chr5.2:7042858-7042877 | MS.gene09621:intron | 25.0% |
!! | AACTCCAAGAATTTTATTGT+AGG | - | chr5.2:7043707-7043726 | MS.gene09621:intron | 25.0% |
!! | AATTTTTGATCTAAGGAGAT+GGG | - | chr5.2:7042859-7042878 | MS.gene09621:intron | 25.0% |
!! | AGGATGAAATTTTTGATCTA+AGG | - | chr5.2:7042852-7042871 | MS.gene09621:intron | 25.0% |
!! | CTGCAATATAAAGGATTTTA+AGG | + | chr5.2:7043270-7043289 | None:intergenic | 25.0% |
!!! | ATTTTGATTGTTTAGGCTAA+AGG | + | chr5.2:7042262-7042281 | None:intergenic | 25.0% |
AACGATAATGTGATCTTAGA+CGG | - | chr5.2:7042779-7042798 | MS.gene09621:intron | 30.0% | |
AATACGTTGCTCATTTAAGA+AGG | - | chr5.2:7043973-7043992 | MS.gene09621:intron | 30.0% | |
AATCTTACCTAGATAAACTG+AGG | + | chr5.2:7043618-7043637 | None:intergenic | 30.0% | |
AATGATTCCTCAGTTTATCT+AGG | - | chr5.2:7043608-7043627 | MS.gene09621:intron | 30.0% | |
ACCTCCTACAATAAAATTCT+TGG | + | chr5.2:7043714-7043733 | None:intergenic | 30.0% | |
ATACGCATTCCAATGTTAAA+TGG | - | chr5.2:7044495-7044514 | MS.gene09621:CDS | 30.0% | |
CAAAGAACATCTCAATATAG+AGG | - | chr5.2:7043079-7043098 | MS.gene09621:CDS | 30.0% | |
CACATTATCGTTTCTTAAGA+CGG | + | chr5.2:7042771-7042790 | None:intergenic | 30.0% | |
CCTTATGATGATAGAAAAAG+AGG | - | chr5.2:7043665-7043684 | MS.gene09621:intron | 30.0% | |
GAAGTTCATGGAAAATATTG+AGG | - | chr5.2:7042233-7042252 | MS.gene09621:intron | 30.0% | |
GATAACAGCTGTAAAAAAGA+GGG | - | chr5.2:7043400-7043419 | MS.gene09621:CDS | 30.0% | |
GCTTGATTTATAACGAATGT+TGG | - | chr5.2:7043332-7043351 | MS.gene09621:intron | 30.0% | |
GGAAATAAAGATCTCTATCT+TGG | - | chr5.2:7044271-7044290 | MS.gene09621:CDS | 30.0% | |
TACTGGAAAATTTATACGAG+TGG | + | chr5.2:7043801-7043820 | None:intergenic | 30.0% | |
TAGATATGAAGCTCATCTAT+GGG | - | chr5.2:7043378-7043397 | MS.gene09621:CDS | 30.0% | |
TCCTTGAATTGAAGACAAAA+TGG | + | chr5.2:7043840-7043859 | None:intergenic | 30.0% | |
TGTAAAATCAGGAAAAGTAG+TGG | - | chr5.2:7044068-7044087 | MS.gene09621:intron | 30.0% | |
! | CAAAATGCACAGCTTTTATA+AGG | + | chr5.2:7043532-7043551 | None:intergenic | 30.0% |
! | CCTCTTTTTCTATCATCATA+AGG | + | chr5.2:7043668-7043687 | None:intergenic | 30.0% |
! | TATTCAAATTGTTTGGCTCA+TGG | + | chr5.2:7042670-7042689 | None:intergenic | 30.0% |
! | TCCAAGAATTTTATTGTAGG+AGG | - | chr5.2:7043710-7043729 | MS.gene09621:intron | 30.0% |
!! | AATGTTGGTTTATCAGACAT+AGG | - | chr5.2:7043347-7043366 | MS.gene09621:intron | 30.0% |
!! | TCTTCTAGCTGATATTTTGT+CGG | + | chr5.2:7042806-7042825 | None:intergenic | 30.0% |
!!! | GAGTATACTCTCACATTTTT+TGG | - | chr5.2:7044304-7044323 | MS.gene09621:CDS | 30.0% |
AAGAATCAGAACCAAACCTT+TGG | - | chr5.2:7043055-7043074 | MS.gene09621:intron | 35.0% | |
ACGATAATGTGATCTTAGAC+GGG | - | chr5.2:7042780-7042799 | MS.gene09621:intron | 35.0% | |
AGAATCAGAACCAAACCTTT+GGG | - | chr5.2:7043056-7043075 | MS.gene09621:intron | 35.0% | |
CAAGCAACAAAAAACACGAA+AGG | + | chr5.2:7043317-7043336 | None:intergenic | 35.0% | |
GCTTACTTGCATTTCTTCTT+TGG | + | chr5.2:7042615-7042634 | None:intergenic | 35.0% | |
GGAAAATTTATACGAGTGGA+GGG | + | chr5.2:7043797-7043816 | None:intergenic | 35.0% | |
GGATAACAGCTGTAAAAAAG+AGG | - | chr5.2:7043399-7043418 | MS.gene09621:CDS | 35.0% | |
GGTTATGAAAGTGAACATGT+TGG | - | chr5.2:7042411-7042430 | MS.gene09621:intron | 35.0% | |
GTAGATATGAAGCTCATCTA+TGG | - | chr5.2:7043377-7043396 | MS.gene09621:CDS | 35.0% | |
TGGAAAATTTATACGAGTGG+AGG | + | chr5.2:7043798-7043817 | None:intergenic | 35.0% | |
! | CTCAATATAGAGGTGTAACA+AGG | - | chr5.2:7043089-7043108 | MS.gene09621:CDS | 35.0% |
! | CTTCCTTTTCATCGTATCAA+CGG | + | chr5.2:7043014-7043033 | None:intergenic | 35.0% |
!! | AAAAGTAGTGGATTCTCAAG+AGG | - | chr5.2:7044080-7044099 | MS.gene09621:intron | 35.0% |
!! | AAAGTAGTGGATTCTCAAGA+GGG | - | chr5.2:7044081-7044100 | MS.gene09621:CDS | 35.0% |
!! | GATGAAAAGGAAGCATCAAA+TGG | - | chr5.2:7043021-7043040 | MS.gene09621:intron | 35.0% |
!! | GCCATTTTGTCTTCAATTCA+AGG | - | chr5.2:7043836-7043855 | MS.gene09621:intron | 35.0% |
!! | GGTTGATAATAAAAGCCTGT+TGG | + | chr5.2:7042360-7042379 | None:intergenic | 35.0% |
AGCTGCAAGAGCTTATGATA+TGG | - | chr5.2:7043751-7043770 | MS.gene09621:CDS | 40.0% | |
ATATGGCTGCACTCAAGTAT+TGG | - | chr5.2:7043768-7043787 | MS.gene09621:CDS | 40.0% | |
ATCTAAGGAGATGGGTATCA+AGG | - | chr5.2:7042867-7042886 | MS.gene09621:intron | 40.0% | |
ATGTTCTTTGCCCAAAGGTT+TGG | + | chr5.2:7043069-7043088 | None:intergenic | 40.0% | |
CAAGCTAGAAAAGGAAAGCA+AGG | - | chr5.2:7043424-7043443 | MS.gene09621:CDS | 40.0% | |
CCAGCTACCAAATATAGTTG+AGG | - | chr5.2:7042832-7042851 | MS.gene09621:intron | 40.0% | |
CCATGTATAGAGGAGTAACA+AGG | - | chr5.2:7044108-7044127 | MS.gene09621:CDS | 40.0% | |
CCTACACCTCTTCATAACTA+TGG | - | chr5.2:7042378-7042397 | MS.gene09621:intron | 40.0% | |
CCTTGTTACTCCTCTATACA+TGG | + | chr5.2:7044111-7044130 | None:intergenic | 40.0% | |
CTTCCGTTGATACGATGAAA+AGG | - | chr5.2:7043008-7043027 | MS.gene09621:intron | 40.0% | |
GCAATGGGAATCTCTCATTA+TGG | - | chr5.2:7042581-7042600 | MS.gene09621:intron | 40.0% | |
GTGTATTTGACACTTGTGCA+TGG | + | chr5.2:7042913-7042932 | None:intergenic | 40.0% | |
TATGGCTGCACTCAAGTATT+GGG | - | chr5.2:7043769-7043788 | MS.gene09621:CDS | 40.0% | |
TCAACGGAAGCAGAATCAAT+AGG | + | chr5.2:7042998-7043017 | None:intergenic | 40.0% | |
TCTAAGGAGATGGGTATCAA+GGG | - | chr5.2:7042868-7042887 | MS.gene09621:intron | 40.0% | |
TGTGATCCATCATGCATGAT+GGG | + | chr5.2:7042453-7042472 | None:intergenic | 40.0% | |
TTGAGATGTTCTTTGCCCAA+AGG | + | chr5.2:7043074-7043093 | None:intergenic | 40.0% | |
TTGGCTCATGGTATGAAGTT+TGG | + | chr5.2:7042658-7042677 | None:intergenic | 40.0% | |
TTGTGATCCATCATGCATGA+TGG | + | chr5.2:7042454-7042473 | None:intergenic | 40.0% | |
TTTATCAGACATAGGTGGAC+AGG | - | chr5.2:7043355-7043374 | MS.gene09621:intron | 40.0% | |
! | AACATGAGAGTTGTTGCTTC+TGG | + | chr5.2:7042745-7042764 | None:intergenic | 40.0% |
! | CCATAGTTATGAAGAGGTGT+AGG | + | chr5.2:7042381-7042400 | None:intergenic | 40.0% |
! | CCTCAACTATATTTGGTAGC+TGG | + | chr5.2:7042835-7042854 | None:intergenic | 40.0% |
! | GTTGGTTTATCAGACATAGG+TGG | - | chr5.2:7043350-7043369 | MS.gene09621:intron | 40.0% |
!! | AAGTAGTGGATTCTCAAGAG+GGG | - | chr5.2:7044082-7044101 | MS.gene09621:CDS | 40.0% |
!!! | CTTGCTTTCCTTTTCTAGCT+TGG | + | chr5.2:7043426-7043445 | None:intergenic | 40.0% |
AAAGAGGGCCAAGCTAGAAA+AGG | - | chr5.2:7043415-7043434 | MS.gene09621:CDS | 45.0% | |
AAGAGAATACGAGCCTGTTG+GGG | - | chr5.2:7042705-7042724 | MS.gene09621:intron | 45.0% | |
ACAAGAGAATACGAGCCTGT+TGG | - | chr5.2:7042703-7042722 | MS.gene09621:intron | 45.0% | |
ACACAGCTTGATTGTGAGCT+AGG | + | chr5.2:7042953-7042972 | None:intergenic | 45.0% | |
ATGGATCACAAGCACAAGGT+TGG | - | chr5.2:7042463-7042482 | MS.gene09621:intron | 45.0% | |
CAAGAGAATACGAGCCTGTT+GGG | - | chr5.2:7042704-7042723 | MS.gene09621:intron | 45.0% | |
CTGAGGAATCATTGTGCATG+TGG | + | chr5.2:7043601-7043620 | None:intergenic | 45.0% | |
TGTAGCAGACACCATCAACA+TGG | - | chr5.2:7044217-7044236 | MS.gene09621:CDS | 45.0% | |
! | ATGGCTGCACTCAAGTATTG+GGG | - | chr5.2:7043770-7043789 | MS.gene09621:CDS | 45.0% |
!! | CATGATGGATCACAAGCACA+AGG | - | chr5.2:7042459-7042478 | MS.gene09621:intron | 45.0% |
!! | TTATAATTATAATAATACTT+AGG | - | chr5.2:7044857-7044876 | MS.gene09621:CDS | 5.0% |
!! | TTATATATGAAAAATAAAAT+TGG | - | chr5.2:7044178-7044197 | MS.gene09621:CDS | 5.0% |
AACAGCTTCAGCAGCAGTAG+TGG | + | chr5.2:7042337-7042356 | None:intergenic | 50.0% | |
AGAGGGGCTTCCATGTATAG+AGG | - | chr5.2:7044098-7044117 | MS.gene09621:CDS | 50.0% | |
CTTGCCACCTTCCATGTTGA+TGG | + | chr5.2:7044231-7044250 | None:intergenic | 50.0% | |
GAAGGTGGCAAGCTCGAATA+GGG | - | chr5.2:7044239-7044258 | MS.gene09621:CDS | 50.0% | |
GACACCATCAACATGGAAGG+TGG | - | chr5.2:7044224-7044243 | MS.gene09621:CDS | 50.0% | |
GCAGACACCATCAACATGGA+AGG | - | chr5.2:7044221-7044240 | MS.gene09621:CDS | 50.0% | |
TGATTGTGAGCTAGGACTCG+CGG | + | chr5.2:7042945-7042964 | None:intergenic | 50.0% | |
!! | TCCATCATGCATGATGGGCA+AGG | + | chr5.2:7042448-7042467 | None:intergenic | 50.0% |
GCCTTGCCCATCATGCATGA+TGG | - | chr5.2:7042444-7042463 | MS.gene09621:intron | 55.0% | |
GCTCGAATAGGGAGAGTTGC+TGG | - | chr5.2:7044250-7044269 | MS.gene09621:CDS | 55.0% | |
GCTGCTGAAGCTGTTCCAAC+AGG | - | chr5.2:7042342-7042361 | MS.gene09621:intron | 55.0% | |
GGAAGGTGGCAAGCTCGAAT+AGG | - | chr5.2:7044238-7044257 | MS.gene09621:CDS | 55.0% | |
! | GCTTCAGCAGCAGTAGTGGA+AGG | + | chr5.2:7042333-7042352 | None:intergenic | 55.0% |
GAGCCTGTTGGGGAGTCTTG+CGG | - | chr5.2:7042715-7042734 | MS.gene09621:intron | 60.0% | |
GCTCCGCAAGACTCCCCAAC+AGG | + | chr5.2:7042721-7042740 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.2 | gene | 7042231 | 7044960 | 7042231 | ID=MS.gene09621 |
chr5.2 | mRNA | 7042231 | 7044960 | 7042231 | ID=MS.gene09621.t1;Parent=MS.gene09621 |
chr5.2 | exon | 7044711 | 7044960 | 7044711 | ID=MS.gene09621.t1.exon1;Parent=MS.gene09621.t1 |
chr5.2 | CDS | 7044711 | 7044960 | 7044711 | ID=cds.MS.gene09621.t1;Parent=MS.gene09621.t1 |
chr5.2 | exon | 7044081 | 7044609 | 7044081 | ID=MS.gene09621.t1.exon2;Parent=MS.gene09621.t1 |
chr5.2 | CDS | 7044081 | 7044609 | 7044081 | ID=cds.MS.gene09621.t1;Parent=MS.gene09621.t1 |
chr5.2 | exon | 7043746 | 7043828 | 7043746 | ID=MS.gene09621.t1.exon3;Parent=MS.gene09621.t1 |
chr5.2 | CDS | 7043746 | 7043828 | 7043746 | ID=cds.MS.gene09621.t1;Parent=MS.gene09621.t1 |
chr5.2 | exon | 7043562 | 7043570 | 7043562 | ID=MS.gene09621.t1.exon4;Parent=MS.gene09621.t1 |
chr5.2 | CDS | 7043562 | 7043570 | 7043562 | ID=cds.MS.gene09621.t1;Parent=MS.gene09621.t1 |
chr5.2 | exon | 7043374 | 7043462 | 7043374 | ID=MS.gene09621.t1.exon5;Parent=MS.gene09621.t1 |
chr5.2 | CDS | 7043374 | 7043462 | 7043374 | ID=cds.MS.gene09621.t1;Parent=MS.gene09621.t1 |
chr5.2 | exon | 7043197 | 7043270 | 7043197 | ID=MS.gene09621.t1.exon6;Parent=MS.gene09621.t1 |
chr5.2 | CDS | 7043197 | 7043270 | 7043197 | ID=cds.MS.gene09621.t1;Parent=MS.gene09621.t1 |
chr5.2 | exon | 7043062 | 7043112 | 7043062 | ID=MS.gene09621.t1.exon7;Parent=MS.gene09621.t1 |
chr5.2 | CDS | 7043062 | 7043112 | 7043062 | ID=cds.MS.gene09621.t1;Parent=MS.gene09621.t1 |
chr5.2 | exon | 7042890 | 7042969 | 7042890 | ID=MS.gene09621.t1.exon8;Parent=MS.gene09621.t1 |
chr5.2 | CDS | 7042890 | 7042969 | 7042890 | ID=cds.MS.gene09621.t1;Parent=MS.gene09621.t1 |
chr5.2 | exon | 7042231 | 7042238 | 7042231 | ID=MS.gene09621.t1.exon9;Parent=MS.gene09621.t1 |
chr5.2 | CDS | 7042231 | 7042238 | 7042231 | ID=cds.MS.gene09621.t1;Parent=MS.gene09621.t1 |
Gene Sequence |
Protein sequence |